Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0005162

Physical Location & Seq

Genomic Coordinates Forward (+)

22165582 .. 22167123

Gene Structure 1542 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ18302

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1542 bp

ATGGCGGCAGATCAACACCCAAGAAAAGAAATACTGGAGAAGGCTATTCTTGGATACCTAGAGAACAACAACGATATCTCAAACTTGGAACAGTTTGCAGAACAGTTGGCAGCCGAAAACAAAAGCGAAATCAATCACAACGACATTGACAGTGCCATCAAGAGCCTCCGTGGTTTCGGATACATTGAGACTCACGACATTAGAAAGGAGTCATGGGTGCTGACTGAAGAAGGAAAGGGATATGCTGCTGCTGGATCACCTGAAGTGCAAGTGTTTTTGGCCATACCAGCAGAAGGTATCACACAAGTAGCATTGAAGAAAAAGCTTGACGAGTCAGTTTTCCAGAGAGGTTTTGGTCGCGCTGCAAACAACGAATGGGTAGAGATATCAAAGAAACTAATAACCAGAAAGGTTCAGCATGTAGATGACAAGGTCAGAGAATTGCTTATGAAAATACATGCCAATGAGGCAGTCGACCAAGCTGAAATTGAGGCTCTAAAGAAAAGGGAACTCATCCAGAAGCAGACTCAAAAGGGATACTCGCCGGTTAAAAAGGGTCCAAATTATGCTCCGGTAAGAAAGAAATTTGTTACCGATCTGACTCGTGAAAGTTTGCAGAACGGGGATTGGAAGGAATTGGAATTCAAAGAGTTCAACTTGAATGCTCAAGGTATGCCTAGTAAATTTGGTGCATTACATCCACTCTTGAAGGTAAGGAAGCAAGTGAAGGATATTTTCATACAGATGGGGTATGAGGAGATGGCTACTAACAACTATATTGAGAGCAGCTTCTGGAACTTCGACGCGCTCTTCCAGCCCCAGCAACACCCTGCCCGCGATTCACATGATACATTCTTCCTGAGAACCCCTTCAACTACCAAGGAGCTTCCTGAAGATTATGTTGAGCGCGTGAAGCGTGTGCACGAGAGTGGTGGTTATGAGTCCAGGGGATATGGTTGTAATTGGAAAAGAGAGGAAGCAGAGAAAAATCTTCTTAGGACACACACCACTGCTGTCTCCTCCAGGATACTTTACTTGCTAGCCAAGGAAGCCCAGCAACCTCCTTTTGCTCCCAAAAAGTACTTCTCTATTGATCGTGTGTTCCGAAACGAATCAGTCGATCGAACACATCTTGCAGAGTTCCACCAAATAGAAGGTTGGATATGTGACCGAGGGCTTACTCTTGGTAACTTGATGGGAGTCCTCGAAGACTTCTTCAAGAGGCTGGGCATGTCCAAGCTGAAATTCAAGCCAGCTTATAATCCTTATACTGAGCCTAGCATGGAGATTTTCGGGTATCATAAGGGTTTTCGGAAGTGGGTGGAGATTGGAAATTCTGGCATGTTCAGACCAGAAATGTTGCGTCCTATGGGATTCCCAGAAGATGTTGAGGTTATTGCATGGGGCCTCTCGCTCGAAAGACCAGCCATGATACTCTACGAGATCGATAACATTCGAGAAATGTTTGGACATCAAGTTGATCTTGGTTTCATCAAGAGAAACCCAATATGCCGCCTTGGATTGTCTCATAATATCGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004812 GO:0004826 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006082 GO:0006139 GO:0006399 GO:0006412 GO:0006418 GO:0006432 GO:0006518 GO:0006520 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009328 GO:0009987 GO:0010467 GO:0016070 GO:0016874 GO:0016875 GO:0019538 GO:0019752 GO:0032991 GO:0034641 GO:0034645 GO:0034660 GO:0043038 GO:0043039 GO:0043043 GO:0043170 GO:0043436 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0140098 GO:0140101 GO:1901360 GO:1901564 GO:1901566 GO:1901576 GO:1902494

KEGG Pathways

Metabolic & Signaling

ko00970 map00970

Pfam Domains

Protein Families

tRNA-synt_2d

Protein Analysis

513

Amino Acids

59.23

Weight (kDa)

6.97

Isoelectric Point (pI)

41.69

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PheRS_DBD3	PF18553	86 - 141	2.3e-11	PheRS DNA binding domain 3
tRNA-synt_2d	PF01409	218 - 499	6.3e-90	tRNA synthetases class II core domain (F)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005162)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G39280 AT4G39280
fragaria_vesca	FvH4_2g08790 FvH4_2g08790 FvH4_3g28200 FvH4_3g28200
malus_domestica	MD05G1066200.v1.1 MD10G1076200.v1.1
prunus_persica	Prupe.8G096800_v2.0.a1 Prupe.8G096800_v2.0.a1 Prupe.8G096800_v2.0.a1
pyrus_communis	pycom10g05960
rosa_chinensis	RchiOBHm_Chr6g0264251 RchiOBHm_Chr7g0204471
rosa_laevigata	RLG00000003457 RLG00000014275
rosa_multiflora	Rmu_co8442849.1_g000001 Rmu_sc0010483.1_g000023
rosa_roxburghii	Rroxscaffold_176G00431660 Rroxscaffold_3G00253060
rosa_rugosa	Rorug06G0011500 Rorug07G0084400
rosa_samantha	Rh6AG130900 Rh6BG128000 Rh6CG126400 Rh6DG113500 Rh7AG213800 Rh7CG226600 Rh7DG221200
rosa_wichuraiana	Rw6G011440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1260
AccI	GTMKAC	1 cut(s)	474
AccII	CGCG	4 cut(s)	360, 806, 837, 909
AciI	CCGC	3 cut(s)	5, 835, 1513
AclWI	GGATC	1 cut(s)	262
AcoI	YGGCCR	1 cut(s)	279
AcsI	RAATTY	5 cut(s)	584, 641, 683, 1244, 1333
AcuI	CTGAAG	3 cut(s)	246, 282, 912
AfaI	GTAC	1 cut(s)	1082
AfiI	CCNNNNNNNGG	1 cut(s)	293
AgsI	TTSAA	8 cut(s)	316, 646, 655, 661, 709, 873, 1219, 1249
AjnI	CCWGG	2 cut(s)	944, 1022
AjuI	GAANNNNNNNTTGG	4 cut(s)	1067, 1099, 1229, 1261
AleI	CACNNNNGTG	1 cut(s)	927
AluBI	AGCT	6 cut(s)	325, 482, 789, 886, 1240, 1256
AluI	AGCT	6 cut(s)	325, 482, 789, 886, 1240, 1256
Alw21I	GWGCWC	1 cut(s)	924
Alw26I	GTCTC	3 cut(s)	182, 1021, 1530
Alw44I	GTGCAC	1 cut(s)	920
AlwI	GGATC	1 cut(s)	262
AlwNI	CAGNNNCTG	1 cut(s)	792
AoxI	GGCC	2 cut(s)	279, 1405
ApaLI	GTGCAC	1 cut(s)	920
ApeKI	GCWGC	5 cut(s)	110, 245, 248, 362, 786
ApoI	RAATTY	5 cut(s)	584, 641, 683, 1244, 1333
Asp700I	GAANNNNTTC	1 cut(s)	868
AspLEI	GCGC	3 cut(s)	362, 808, 909
AspS9I	GGNCC	2 cut(s)	557, 1405
AsuHPI	GGTGA	1 cut(s)	249
AsuNHI	GCTAGC	1 cut(s)	1039
AvaII	GGWCC	1 cut(s)	557
BaeGI	GKGCMC	1 cut(s)	924
BalI	TGGCCA	1 cut(s)	281
BauI	CACGAG	2 cut(s)	603, 923
BbsI	GAAGAC	1 cut(s)	1215
Bbv12I	GWGCWC	1 cut(s)	924
BbvI	GCAGC	5 cut(s)	122, 232, 235, 349, 798
BccI	CCATC	4 cut(s)	164, 739, 754, 1189
BciT130I	CCWGG	2 cut(s)	946, 1024
BciVI	GTATCC	4 cut(s)	47, 173, 530, 1020
BcoDI	GTCTC	3 cut(s)	182, 1021, 1530
BfaI	CTAG	4 cut(s)	59, 678, 1040, 1278
BfuI	GTATCC	4 cut(s)	47, 173, 530, 1020
BglI	GCCNNNNNGGC	1 cut(s)	467
BisI	GCNGC	7 cut(s)	6, 111, 246, 249, 363, 787, 1513
BlsI	GCNGC	7 cut(s)	7, 112, 247, 250, 364, 788, 1514
BmcAI	AGTACT	1 cut(s)	1082
Bme1390I	CCNGG	2 cut(s)	946, 1024
Bme18I	GGWCC	1 cut(s)	557
BmgT120I	GGNCC	2 cut(s)	557, 1405
BmiI	GGNNCC	2 cut(s)	558, 1406
BmrFI	CCNGG	2 cut(s)	946, 1024
BmtI	GCTAGC	1 cut(s)	1043
BpiI	GAAGAC	1 cut(s)	1215
BpmI	CTGGAG	2 cut(s)	56, 1006
BpuEI	CTTGAG	1 cut(s)	651
Bsa29I	ATCGAT	1 cut(s)	1446
BsaJI	CCNNGG	6 cut(s)	169, 879, 945, 1044, 1171, 1516
BsaWI	WCCGGW	1 cut(s)	571
Bsc4I	CCNNNNNNNGG	1 cut(s)	293
Bse118I	RCCGGY	1 cut(s)	544
Bse1I	ACTGG	1 cut(s)	39
BseBI	CCWGG	2 cut(s)	946, 1024
BseCI	ATCGAT	1 cut(s)	1446
BseDI	CCNNGG	6 cut(s)	169, 879, 945, 1044, 1171, 1516
BseGI	GGATG	2 cut(s)	513, 697
BseLI	CCNNNNNNNGG	1 cut(s)	293
BseMII	CTCAG	2 cut(s)	851, 1263
BseNI	ACTGG	1 cut(s)	39
BseRI	GAGGAG	2 cut(s)	770, 1009
BseSI	GKGCMC	1 cut(s)	924
BseXI	GCAGC	5 cut(s)	122, 232, 235, 349, 798
BseYI	CCCAGC	3 cut(s)	819, 1053, 1225
Bsh1236I	CGCG	4 cut(s)	360, 806, 837, 909
Bsh1285I	CGRYCG	1 cut(s)	1123
BshFI	GGCC	2 cut(s)	281, 1407
BshVI	ATCGAT	1 cut(s)	1446
BsiEI	CGRYCG	1 cut(s)	1123
BsiHKAI	GWGCWC	1 cut(s)	924
BsiSI	CCGG	2 cut(s)	545, 572
BslI	CCNNNNNNNGG	1 cut(s)	293
BsmAI	GTCTC	3 cut(s)	182, 1021, 1530
BsmI	GAATGC	1 cut(s)	667
BsnI	GGCC	2 cut(s)	281, 1407
Bsp1286I	GDGCHC	1 cut(s)	924
Bsp143I	GATC	7 cut(s)	10, 254, 595, 1093, 1120, 1443, 1480
BspACI	CCGC	3 cut(s)	5, 835, 1513
BspANI	GGCC	2 cut(s)	281, 1407
BspCNI	CTCAG	2 cut(s)	852, 1264
BspDI	ATCGAT	1 cut(s)	1446
BspFNI	CGCG	4 cut(s)	360, 806, 837, 909
BspLI	GGNNCC	2 cut(s)	558, 1406
BspOI	GCTAGC	1 cut(s)	1043
BspPI	GGATC	1 cut(s)	262
BspQI	GCTCTTC	1 cut(s)	815
BsrFI	RCCGGY	1 cut(s)	544
BsrI	ACTGG	1 cut(s)	39
BssAI	RCCGGY	1 cut(s)	544
BssECI	CCNNGG	6 cut(s)	169, 879, 945, 1044, 1171, 1516
BssMI	GATC	7 cut(s)	10, 254, 595, 1093, 1120, 1443, 1480
BssSI	CACGAG	2 cut(s)	603, 923
BssT1I	CCWWGG	3 cut(s)	879, 1044, 1516
Bst2BI	CACGAG	2 cut(s)	603, 923
Bst2UI	CCWGG	2 cut(s)	946, 1024
Bst4CI	ACNGT	3 cut(s)	93, 105, 152
Bst6I	CTCTTC	1 cut(s)	815
BstC8I	GCNNGC	3 cut(s)	835, 1041, 1254
BstDEI	CTNAG	3 cut(s)	860, 995, 1272
BstDSI	CCRYGG	1 cut(s)	169
BstF5I	GGATG	2 cut(s)	513, 697
BstFNI	CGCG	4 cut(s)	360, 806, 837, 909
BstHHI	GCGC	3 cut(s)	362, 808, 909
BstKTI	GATC	7 cut(s)	13, 257, 598, 1096, 1123, 1446, 1483
BstMAI	GTCTC	3 cut(s)	182, 1021, 1530
BstMBI	GATC	7 cut(s)	10, 254, 595, 1093, 1120, 1443, 1480
BstMCI	CGRYCG	1 cut(s)	1123
BstMWI	GCNNNNNNNGC	5 cut(s)	287, 467, 814, 913, 1049
BstNI	CCWGG	2 cut(s)	946, 1024
BstNSI	RCATGY	4 cut(s)	422, 461, 1234, 1345
BstSCI	CCNGG	2 cut(s)	944, 1022
BstSLI	GKGCMC	1 cut(s)	924
BstUI	CGCG	4 cut(s)	360, 806, 837, 909
BstV1I	GCAGC	5 cut(s)	122, 232, 235, 349, 798
BstV2I	GAAGAC	1 cut(s)	1215
Bsu15I	ATCGAT	1 cut(s)	1446
BsuI	GTATCC	4 cut(s)	47, 173, 530, 1020
BsuRI	GGCC	2 cut(s)	281, 1407
BsuTUI	ATCGAT	1 cut(s)	1446
BtgI	CCRYGG	1 cut(s)	169
BtsCI	GGATG	2 cut(s)	513, 697
BtsI	GCAGTG	1 cut(s)	1008
BtsIMutI	CAGTG	2 cut(s)	157, 1008
Cac8I	GCNNGC	3 cut(s)	835, 1041, 1254
CaiI	CAGNNNCTG	1 cut(s)	792
CfoI	GCGC	3 cut(s)	362, 808, 909
Cfr10I	RCCGGY	1 cut(s)	544
Cfr13I	GGNCC	2 cut(s)	557, 1405
ClaI	ATCGAT	1 cut(s)	1446
CseI	GACGC	2 cut(s)	812, 1352
Csp6I	GTAC	1 cut(s)	1081
CviAII	CATG	9 cut(s)	213, 419, 458, 845, 1231, 1282, 1342, 1401, 1429
CviQI	GTAC	1 cut(s)	1081
DdeI	CTNAG	3 cut(s)	860, 995, 1272
DpnI	GATC	7 cut(s)	12, 256, 597, 1095, 1122, 1445, 1482
DpnII	GATC	7 cut(s)	10, 254, 595, 1093, 1120, 1443, 1480
EaeI	YGGCCR	1 cut(s)	279
Eam1104I	CTCTTC	1 cut(s)	815
EarI	CTCTTC	1 cut(s)	815
Eco130I	CCWWGG	3 cut(s)	879, 1044, 1516
Eco32I	GATATC	2 cut(s)	76, 387
Eco47I	GGWCC	1 cut(s)	557
Eco57I	CTGAAG	3 cut(s)	246, 282, 912
EcoO109I	RGGNCCY	1 cut(s)	1405
EcoRI	GAATTC	1 cut(s)	641
EcoRII	CCWGG	2 cut(s)	944, 1022
EcoRV	GATATC	2 cut(s)	76, 387
EcoT14I	CCWWGG	3 cut(s)	879, 1044, 1516
ErhI	CCWWGG	3 cut(s)	879, 1044, 1516
FaeI	CATG	9 cut(s)	216, 422, 461, 848, 1234, 1285, 1345, 1404, 1432
FalI	AAGNNNNNCTT	2 cut(s)	1467, 1499
FatI	CATG	9 cut(s)	212, 418, 457, 844, 1230, 1281, 1341, 1400, 1428
FauI	CCCGC	1 cut(s)	842
FblI	GTMKAC	1 cut(s)	474
Fnu4HI	GCNGC	7 cut(s)	6, 111, 246, 249, 363, 787, 1513
FokI	GGATG	2 cut(s)	500, 684
Fsp4HI	GCNGC	7 cut(s)	6, 111, 246, 249, 363, 787, 1513
FspBI	CTAG	4 cut(s)	59, 678, 1040, 1278
GlaI	GCGC	3 cut(s)	361, 807, 908
GluI	GCNGC	7 cut(s)	6, 111, 246, 249, 363, 787, 1513
GsaI	CCCAGC	3 cut(s)	823, 1057, 1229
GsuI	CTGGAG	2 cut(s)	56, 1006
HaeIII	GGCC	2 cut(s)	281, 1407
HapII	CCGG	2 cut(s)	545, 572
HgaI	GACGC	2 cut(s)	812, 1352
HhaI	GCGC	3 cut(s)	362, 808, 909
Hin1II	CATG	9 cut(s)	216, 422, 461, 848, 1234, 1285, 1345, 1404, 1432
Hin6I	GCGC	3 cut(s)	360, 806, 907
HinP1I	GCGC	3 cut(s)	360, 806, 907
HincII	GTYRAC	1 cut(s)	475
HindII	GTYRAC	1 cut(s)	475
HindIII	AAGCTT	1 cut(s)	323
HpaII	CCGG	2 cut(s)	545, 572
HphI	GGTGA	1 cut(s)	249
Hpy166II	GTNNAC	2 cut(s)	475, 922
Hpy188I	TCNGA	6 cut(s)	179, 437, 600, 1106, 1314, 1349
Hpy8I	GTNNAC	2 cut(s)	475, 922
Hpy99I	CGWCG	1 cut(s)	806
HpyAV	CCTTC	8 cut(s)	34, 224, 287, 625, 703, 721, 879, 1148
HpyCH4III	ACNGT	3 cut(s)	93, 105, 152
HpyCH4V	TGCA	8 cut(s)	98, 268, 365, 616, 692, 922, 1136, 1400
HpyF10VI	GCNNNNNNNGC	5 cut(s)	287, 467, 814, 913, 1049
HpyF3I	CTNAG	3 cut(s)	860, 995, 1272
Hsp92II	CATG	9 cut(s)	216, 422, 461, 848, 1234, 1285, 1345, 1404, 1432
HspAI	GCGC	3 cut(s)	360, 806, 907
Kzo9I	GATC	7 cut(s)	10, 254, 595, 1093, 1120, 1443, 1480
LguI	GCTCTTC	1 cut(s)	815
LmnI	GCTCC	3 cut(s)	574, 883, 1075
Lsp1109I	GCAGC	5 cut(s)	122, 232, 235, 349, 798
MaeI	CTAG	4 cut(s)	59, 678, 1040, 1278
MaeIII	GTNAC	3 cut(s)	589, 1166, 1187
MalI	GATC	7 cut(s)	12, 256, 597, 1095, 1122, 1445, 1482
MboI	GATC	7 cut(s)	10, 254, 595, 1093, 1120, 1443, 1480
MboII	GAAGA	9 cut(s)	239, 328, 802, 847, 905, 983, 1207, 1220, 1394
MhlI	GDGCHC	1 cut(s)	924
MlsI	TGGCCA	1 cut(s)	281
MluNI	TGGCCA	1 cut(s)	281
MlyI	GAGTC	7 cut(s)	184, 218, 341, 520, 595, 950, 1209
MmeI	TCCRAC	1 cut(s)	1139
Mox20I	TGGCCA	1 cut(s)	281
MroXI	GAANNNNTTC	1 cut(s)	868
MscI	TGGCCA	1 cut(s)	281
MseI	TTAA	1 cut(s)	549
MslI	CAYNNNNRTG	4 cut(s)	423, 462, 743, 927
Msp20I	TGGCCA	1 cut(s)	281
MspI	CCGG	2 cut(s)	545, 572
MspR9I	CCNGG	2 cut(s)	946, 1024
Mva1269I	GAATGC	1 cut(s)	667
MvaI	CCWGG	2 cut(s)	946, 1024
MvnI	CGCG	4 cut(s)	360, 806, 837, 909
MwoI	GCNNNNNNNGC	5 cut(s)	287, 467, 814, 913, 1049
NdeII	GATC	7 cut(s)	10, 254, 595, 1093, 1120, 1443, 1480
NheI	GCTAGC	1 cut(s)	1039
NlaIII	CATG	9 cut(s)	216, 422, 461, 848, 1234, 1285, 1345, 1404, 1432
NlaIV	GGNNCC	2 cut(s)	558, 1406
NmuCI	GTSAC	1 cut(s)	1166
NspI	RCATGY	4 cut(s)	422, 461, 1234, 1345
OliI	CACNNNNGTG	1 cut(s)	927
PciSI	GCTCTTC	1 cut(s)	815
PcsI	WCGNNNNNNNCGW	2 cut(s)	1102, 1116
PctI	GAATGC	1 cut(s)	667
PdmI	GAANNNNTTC	1 cut(s)	868
PfeI	GAWTC	3 cut(s)	839, 1112, 1374
PflFI	GACNNNGTC	1 cut(s)	431
PfoI	TCCNGGA	1 cut(s)	1022
PkrI	GCNGC	7 cut(s)	7, 112, 247, 250, 364, 788, 1514
Ple19I	CGATCG	1 cut(s)	1123
PleI	GAGTC	7 cut(s)	184, 217, 340, 520, 595, 949, 1208
PpsI	GAGTC	7 cut(s)	184, 217, 340, 520, 595, 949, 1208
PsiI	TTATAA	1 cut(s)	1260
Psp6I	CCWGG	2 cut(s)	944, 1022
PspFI	CCCAGC	3 cut(s)	819, 1053, 1225
PspGI	CCWGG	2 cut(s)	944, 1022
PspN4I	GGNNCC	2 cut(s)	558, 1406
PspPI	GGNCC	2 cut(s)	557, 1405
PstNI	CAGNNNCTG	1 cut(s)	792
PsyI	GACNNNGTC	1 cut(s)	431
PvuI	CGATCG	1 cut(s)	1123
RsaI	GTAC	1 cut(s)	1082
RsaNI	GTAC	1 cut(s)	1081
RseI	CAYNNNNRTG	4 cut(s)	423, 462, 743, 927
SalI	GTCGAC	1 cut(s)	473
SapI	GCTCTTC	1 cut(s)	815
SaqAI	TTAA	1 cut(s)	549
SatI	GCNGC	7 cut(s)	6, 111, 246, 249, 363, 787, 1513
Sau3AI	GATC	7 cut(s)	10, 254, 595, 1093, 1120, 1443, 1480
Sau96I	GGNCC	2 cut(s)	557, 1405
ScaI	AGTACT	1 cut(s)	1082
SchI	GAGTC	7 cut(s)	184, 218, 341, 520, 595, 950, 1209
ScrFI	CCNGG	2 cut(s)	946, 1024
SduI	GDGCHC	1 cut(s)	924
SinI	GGWCC	1 cut(s)	557
SmiMI	CAYNNNNRTG	4 cut(s)	423, 462, 743, 927
SmlI	CTYRAG	1 cut(s)	666
SmoI	CTYRAG	1 cut(s)	666
SsiI	CCGC	3 cut(s)	5, 835, 1513
SspMI	CTAG	4 cut(s)	59, 678, 1040, 1278
StyD4I	CCNGG	2 cut(s)	944, 1022
StyI	CCWWGG	3 cut(s)	879, 1044, 1516
TaaI	ACNGT	3 cut(s)	93, 105, 152
TaqI	TCGA	9 cut(s)	474, 801, 1119, 1123, 1206, 1416, 1446, 1456, 1536
TaqII	GACCGA	1 cut(s)	1185
TatI	WGTACW	1 cut(s)	1080
TauI	GCSGC	2 cut(s)	8, 1515
TfiI	GAWTC	3 cut(s)	839, 1112, 1374
Tru1I	TTAA	1 cut(s)	549
Tru9I	TTAA	1 cut(s)	549
TscAI	CASTG	2 cut(s)	157, 1015
TseFI	GTSAC	1 cut(s)	1166
TseI	GCWGC	5 cut(s)	110, 245, 248, 362, 786
Tsp45I	GTSAC	1 cut(s)	1166
TspDTI	ATGAA	3 cut(s)	464, 727, 1480
TspGWI	ACGGA	1 cut(s)	158
TspRI	CASTG	2 cut(s)	157, 1015
Tth111I	GACNNNGTC	1 cut(s)	431
VneI	GTGCAC	1 cut(s)	920
VpaK11BI	GGWCC	1 cut(s)	557
XapI	RAATTY	5 cut(s)	584, 641, 683, 1244, 1333
XceI	RCATGY	4 cut(s)	422, 461, 1234, 1345
XcmI	CCANNNNNNNNNTGG	1 cut(s)	350
XmiI	GTMKAC	1 cut(s)	474
XmnI	GAANNNNTTC	1 cut(s)	868
XspI	CTAG	4 cut(s)	59, 678, 1040, 1278
ZrmI	AGTACT	1 cut(s)	1082

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.