MD10G1292700.v1.1

Telomerase activating protein Est1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr10
OG0002793
Physical Location & Seq
Reverse (-)
38099497 .. 38104548
5052 bp
Loading structure...
UTR
Exon/CDS
Intron
MD10G1292700.v1.1.491

Sequence Viewer

Length: 2940 bp
ATGAAGGCGATTTCACCTTTGCCCCTCAAAGATCAGGGAGATAGACCCAAGTTTTTGATTGAGGTTGCAACCAAAGAAAATCGGTTGTGGGGTGTGGTCCATTCCAAAGGACTCTTGAACTCTGAGGTCCAGGACTTGTACTGCGAAGTGCGATCTGGTTATGAGAATCTCATATTGAGTGATCATGAGCAGTTGGAATTTCAAGACATTGAGTATTCTTTGTGGAAGCTACACTACAAGCATATTGACGAGTTTCGCAAAAGACTAAAAGGAAGTTCAGTGAATGCAGAAAGCAAAAATATGGTGGTGCTACGAAATGATATTCATGTAGAAGGGTTTAAACTCTTTCTATCAGAAGCAATTGAATTCTACCAGAATATGATTGGGAAGATAAGTAAACGTAAGAGGCTCCCAGAAGAGTCTGTGATAAATAGAAAGGGAGGCGGCGACCTTACTTTTGCAGAGCACAAAAAGATGCAGAAGTGCCAATTTTTGTGCCATCGCTTTTTGGTGTGTCTCGGGGATCTGGCTAGATACAGAGAACAATATGAAAAGCCTGATGTGCAAACCCGAAATTGGTCAGTTGCGGCCACTCACTACTTGGAAGCGGCAGCAACTTGGTCAGATAGTGGAAACCCCCACAATCAGTTGGCTGTATTGGCAACATATATTGGTGACGAGTTCCTCGCTTTGTACCACTGTATAAGAAGTTTAGCTGTTAAAGAACCTTTCCCTGATGCTCGGGGTAACCTTATCCTACTGTTTGAAAGGAGCAGGTCATCTCATGTATATTCTCCTTCAAGCGAGGCCCACTTTAATTTCTTAAACCCGTCTGAAAGAACCAGTGTTCAGACTACTTCACAGTCGAGCGATGATACAAAGTTATGGTCTCTTATTATTGGAATGTTAAGTTTCTTTCACATTAAATCAAGTGTGGATGAATTCCCCTGTGCTTTTGCGTCTACTATGAGAGAGTTCGATGCACTGATGGCACTAGATGATACAGAGCTAAAAGCTGCATTGGAGCCATATCAGCGTATGGATTCAGTTAGAAGAGGCCCTTTTCGAGCACTCCAAGTTGTTTCTGTACTAGTCTTTACCGTACAGAATCTATTCAAGACCCCGGAAATAAAAGGATCAACTGACAAAATCGATATCCAGCAGAAAGAGCTGAGACAATTGGCACTGACTGCAGCATTCATTTTCATGGGGCGGTTCGTTGAAAGATGTTCAGAGGCTGGTGCAGTAGAGACTTGCCCCCTTCTACCAGCTGTGCTTTTTTTTGTGGAGTGGCTAGTCGTCGTGCTTGATGAAGCAGAAATGTATGGGGTCGATGAAAAATGCAGAAGTGCGATGTCTTACTTTTTTGGTGCATTCATTGATCTTCTGAAGCAATTCAACCTCAACGAGGATGAGGCCAAGTATCCAGAAGGTACTCCTCTGTGGGAAGACTATGAGCTGAGGGGATTTGCACCGGTAGTTTGTGTTCATGCATCACTAGATTTCTCATATCATCCGGAACATATTGACAATTATGACAGCGGAATTGATTGTCGTGCTCAGAGAATCATCAAGGCTGCAATTAAAATTGCAGACAGATCAACAGGTTCTCAAAAGTGGATTGTCTATGACAAATCTCGAAGAAAATTTTCCAAAGTCTATATGGCAGAGTCAAATGAGTATGCAGACGGGAAAGAACTAGGAGGATTCGAGTCCAACAATCCTGATGGTAAACTGAAAATGCCTAGTCTTCATATCCACGAACCGCTGAAAGAATGCAAGAAACAGATGATTGCTGGGGAAAATCTGAGTTCTAACGGACATTCTGTTGATGCGGAAGAGGAAGAGGTTATTCTCTTCAGGCCTCTTACAAGACACAACTCAGCACCACTCAAGATTTCCTCTACTTTAAAGGATCCATACCCTACGAAAGATATGGCGGATCAAAGTGTACCTTCTGATGAGTGCTTGCGCCGTGCCACATCACTTCTTATAGCGCAAAACCAGGCCAAGACTGATCCCTTATCTTTTCATGCTGATATCACTAATTTTCGGCGCAACGTGCCATTTAAACAGCAGGAGCCTTCTGTGAAGGAACAGCCATTTTTGGAAACTCCAATCATAGCCGGGCCTCCCTCTCTTAATGCTTGGGTCCTGGACGGAGGAAATTTGAACAGTAATAAGGAGAAAAGCACAAGCAAAATAAGTAAACGTGGCTCGAGCTTGAGCCCCATTGAGGAAATAGCTTCGGAATATCTGGATGTTCTGTCCATCAATGAAAATGAATATTCTCTCGGTAGTCACGAAATTTCGAGCACTCATTCCTCTTCCTCTACTTATACAACTCCTGTGCCTTCTGCTCCTCTATTGCCAGATGATGCTGTTTGGTTTGATGGTGGAACCGAATCTAGTTTCAGCGACTGCAAAAGCTCCGCGGGGATCAGCATGACAGATAATCTCTGTGACGCTAACGCAACATATTCACAGGCAGGCAGCTATGCAAACTGGACTGCAACTCAAGCGCTACCTGATTATAGTTCCAGCATTCTAAATTTCATGGATAAGTACCCGCCTTGGCATCGAATGACTTCATCAGAATGGCTCCGTCAGTACAGAGAGAGTCTCAACCTTGGCCACCATGCATGGCCAAATTCTCTGTATCCGCCCAGTAACCGCGGAAACTTATACGATTATGATGCTTCCAGGTTAAATCATTTCAACCGATGGGGACATCACGCGGCGTCTAATCCGCCAATGCAGATGAACAACCTGCCATCGAATCCGCCTTTTCCTGGCTACCAAAGACCAATCCCCTACGGGTGTGGCGCTGTGACGGATGTAAGAAACGAGCAGCAGCCGCTTCTGCAGTACCTTAAGGAGAAAGAAACTAAACTGCAGCATGATCCTGCTGCCAGAGGTCCTAGTTATATGGACGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000184 GO:0000723 GO:0000956 GO:0003674 GO:0003676 GO:0003677 GO:0003723 GO:0003824 GO:0004518 GO:0004540 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005697 GO:0005737 GO:0006139 GO:0006259 GO:0006278 GO:0006401 GO:0006402 GO:0006403 GO:0006405 GO:0006406 GO:0006611 GO:0006725 GO:0006807 GO:0006810 GO:0006886 GO:0006913 GO:0006996 GO:0007004 GO:0008104 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009058 GO:0009059 GO:0009892 GO:0009894 GO:0009987 GO:0010467 GO:0010468 GO:0010605 GO:0010608 GO:0010629 GO:0010833 GO:0015031 GO:0015833 GO:0015931 GO:0016043 GO:0016070 GO:0016071 GO:0016787 GO:0016788 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0019439 GO:0031323 GO:0031329 GO:0031503 GO:0032200 GO:0032991 GO:0033036 GO:0034613 GO:0034641 GO:0034645 GO:0034654 GO:0034655 GO:0042162 GO:0042592 GO:0042886 GO:0043021 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043487 GO:0043565 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044260 GO:0044265 GO:0044270 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0044877 GO:0045184 GO:0046483 GO:0046700 GO:0046907 GO:0048519 GO:0050657 GO:0050658 GO:0050789 GO:0050794 GO:0051028 GO:0051168 GO:0051169 GO:0051171 GO:0051179 GO:0051234 GO:0051236 GO:0051252 GO:0051276 GO:0051641 GO:0051649 GO:0060249 GO:0060255 GO:0065007 GO:0065008 GO:0070034 GO:0070727 GO:0071166 GO:0071426 GO:0071427 GO:0071702 GO:0071704 GO:0071705 GO:0071840 GO:0071897 GO:0080090 GO:0090304 GO:0090305 GO:0090501 GO:0097159 GO:0140098 GO:1901360 GO:1901361 GO:1901362 GO:1901363 GO:1901575 GO:1901576 GO:1990904
KEGG Pathways
Metabolic & Signaling
ko03015 map03015
Pfam Domains
Protein Families
EST1 EST1_DNA_bind

Protein Analysis

980

Amino Acids

110.87

Weight (kDa)

5.77

Isoelectric Point (pI)

50.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EST1 PF10374 70 - 184 1.1e-15 Telomerase activating protein Est1
EST1_DNA_bind PF10373 196 - 495 3.5e-54 Est1 DNA/RNA binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 765, 2778
AccI GTMKAC 1 cut(s) 962
AccII CGCG 3 cut(s) 2435, 2676, 2738
AccIII TCCGGA 1 cut(s) 1516
AclWI GGATC 8 cut(s) 531, 1144, 1910, 1923, 1950, 2012, 2447, 2897
AcoI YGGCCR 3 cut(s) 588, 2632, 2645
AcsI RAATTY 8 cut(s) 197, 365, 941, 1646, 2167, 2307, 2551, 2650
AcuI CTGAAG 2 cut(s) 1409, 1843
AcyI GRCGYC 1 cut(s) 2741
AfaI GTAC 9 cut(s) 140, 695, 1089, 1104, 1435, 1953, 2567, 2612, 2870
AfeI AGCGCT 1 cut(s) 2523
AfiI CCNNNNNNNGG 4 cut(s) 576, 1408, 2236, 2792
AflII CTTAAG 1 cut(s) 2873
AgeI ACCGGT 1 cut(s) 1474
AhlI ACTAGT 1 cut(s) 1090
AjnI CCWGG 5 cut(s) 129, 2004, 2154, 2702, 2791
Alw21I GWGCWC 4 cut(s) 468, 1072, 1561, 2318
Alw26I GTCTC 5 cut(s) 521, 894, 1168, 1244, 2627
AlwI GGATC 8 cut(s) 531, 1144, 1910, 1923, 1950, 2012, 2447, 2897
AlwNI CAGNNNCTG 2 cut(s) 1238, 2421
Ama87I CYCGRG 3 cut(s) 518, 741, 2218
Aor13HI TCCGGA 1 cut(s) 1516
Aor51HI AGCGCT 1 cut(s) 2523
AoxI GGCC 9 cut(s) 588, 807, 1057, 1416, 1862, 2007, 2129, 2632, 2645
ApeKI GCWGC 9 cut(s) 611, 1016, 1193, 1577, 2493, 2851, 2854, 2896, 2909
ApoI RAATTY 8 cut(s) 197, 365, 941, 1646, 2167, 2307, 2551, 2650
ArsI GACNNNNNNTTYG 4 cut(s) 440, 472, 872, 904
AsiGI ACCGGT 1 cut(s) 1474
Asp700I GAANNNNTTC 4 cut(s) 1112, 1394, 1648, 2587
AspLEI GCGC 5 cut(s) 1974, 1999, 2058, 2524, 2828
AspS9I GGNCC 7 cut(s) 97, 127, 808, 1058, 2129, 2152, 2918
AsuC2I CCSGG 2 cut(s) 1124, 2128
AsuHPI GGTGA 2 cut(s) 6, 686
AvaI CYCGRG 3 cut(s) 518, 741, 2218
AvaII GGWCC 4 cut(s) 97, 127, 2152, 2918
BalI TGGCCA 2 cut(s) 2634, 2647
BamHI GGATCC 1 cut(s) 1915
BanII GRGCYC 1 cut(s) 2231
BarI GAAGNNNNNNTAC 2 cut(s) 218, 250
BbsI GAAGAC 2 cut(s) 1455, 1742
Bbv12I GWGCWC 4 cut(s) 468, 1072, 1561, 2318
BbvCI CCTCAGC 1 cut(s) 1460
BbvI GCAGC 9 cut(s) 623, 1003, 1205, 1564, 2505, 2863, 2866, 2896, 2908
BccI CCATC 7 cut(s) 507, 982, 1721, 2279, 2387, 2718, 2782
BceAI ACGGC 1 cut(s) 1959
BcgI CGANNNNNNTGC 2 cut(s) 2678, 2712
BciT130I CCWGG 5 cut(s) 131, 2006, 2156, 2704, 2793
BciVI GTATCC 2 cut(s) 1434, 2670
BclI TGATCA 1 cut(s) 181
BcnI CCSGG 2 cut(s) 1124, 2128
BcoDI GTCTC 5 cut(s) 521, 894, 1168, 1244, 2627
BcuI ACTAGT 1 cut(s) 1090
BfaI CTAG 9 cut(s) 531, 995, 1091, 1295, 1499, 1700, 1746, 2409, 2922
BfmI CTRYAG 3 cut(s) 1191, 2864, 2894
BfoI RGCGCY 2 cut(s) 2525, 2829
BfrI CTTAAG 1 cut(s) 2873
BfuAI ACCTGC 2 cut(s) 765, 2778
BfuI GTATCC 2 cut(s) 1434, 2670
Bme1390I CCNGG 7 cut(s) 131, 1124, 2006, 2128, 2156, 2704, 2793
Bme18I GGWCC 4 cut(s) 97, 127, 2152, 2918
BmeT110I CYCGRG 3 cut(s) 518, 741, 2218
BmgT120I GGNCC 7 cut(s) 97, 127, 808, 1058, 2129, 2152, 2918
BmiI GGNNCC 7 cut(s) 410, 1026, 1917, 2082, 2153, 2401, 2603
BmrFI CCNGG 7 cut(s) 131, 1124, 2006, 2128, 2156, 2704, 2793
BmrI ACTGGG 1 cut(s) 2661
BmsI GCATC 8 cut(s) 465, 727, 970, 1502, 1822, 2368, 2587, 2686
BmuI ACTGGG 1 cut(s) 2661
BpiI GAAGAC 2 cut(s) 1455, 1742
BplI GAGNNNNNCTC 2 cut(s) 2607, 2639
Bpu10I CCTNAGC 1 cut(s) 1460
BpuEI CTTGAG 3 cut(s) 1877, 2245, 2502
BpuMI CCSGG 2 cut(s) 1124, 2128
Bsa29I ATCGAT 1 cut(s) 1152
BsaHI GRCGYC 1 cut(s) 2741
BsaI GGTCTC 1 cut(s) 894
BsaJI CCNNGG 5 cut(s) 1122, 2433, 2573, 2629, 2674
BsaWI WCCGGW 2 cut(s) 1474, 1516
Bsc4I CCNNNNNNNGG 4 cut(s) 576, 1408, 2236, 2792
Bse118I RCCGGY 1 cut(s) 1474
Bse1I ACTGG 3 cut(s) 843, 2510, 2667
BseAI TCCGGA 1 cut(s) 1516
BseBI CCWGG 5 cut(s) 131, 2006, 2156, 2704, 2793
BseCI ATCGAT 1 cut(s) 1152
BseDI CCNNGG 5 cut(s) 1122, 2433, 2573, 2629, 2674
BseGI GGATG 5 cut(s) 943, 1417, 1513, 2266, 2842
BseLI CCNNNNNNNGG 4 cut(s) 576, 1408, 2236, 2792
BseMII CTCAG 6 cut(s) 114, 1163, 1451, 1574, 1799, 1896
BseNI ACTGG 3 cut(s) 843, 2510, 2667
BseRI GAGGAG 2 cut(s) 1428, 2352
BseXI GCAGC 9 cut(s) 623, 1003, 1205, 1564, 2505, 2863, 2866, 2896, 2908
BseYI CCCAGC 1 cut(s) 1796
BsgI GTGCAG 1 cut(s) 1263
Bsh1236I CGCG 3 cut(s) 2435, 2676, 2738
BshFI GGCC 9 cut(s) 590, 809, 1059, 1418, 1864, 2009, 2131, 2634, 2647
BshTI ACCGGT 1 cut(s) 1474
BshVI ATCGAT 1 cut(s) 1152
BsiHKAI GWGCWC 4 cut(s) 468, 1072, 1561, 2318
BsiHKCI CYCGRG 3 cut(s) 518, 741, 2218
BsiSI CCGG 4 cut(s) 1124, 1475, 1517, 2127
BslFI GGGAC 1 cut(s) 2742
BslI CCNNNNNNNGG 4 cut(s) 576, 1408, 2236, 2792
BsmAI GTCTC 5 cut(s) 521, 894, 1168, 1244, 2627
BsmFI GGGAC 1 cut(s) 2742
BsmI GAATGC 5 cut(s) 289, 1196, 1373, 1781, 2544
BsnI GGCC 9 cut(s) 590, 809, 1059, 1418, 1864, 2009, 2131, 2634, 2647
Bso31I GGTCTC 1 cut(s) 894
BsoBI CYCGRG 3 cut(s) 518, 741, 2218
Bsp1286I GDGCHC 5 cut(s) 468, 1072, 1561, 2231, 2318
Bsp13I TCCGGA 1 cut(s) 1516
BspANI GGCC 9 cut(s) 590, 809, 1059, 1418, 1864, 2009, 2131, 2634, 2647
BspCNI CTCAG 6 cut(s) 115, 1164, 1452, 1573, 1800, 1895
BspDI ATCGAT 1 cut(s) 1152
BspEI TCCGGA 1 cut(s) 1516
BspFNI CGCG 3 cut(s) 2435, 2676, 2738
BspHI TCATGA 1 cut(s) 184
BspLI GGNNCC 7 cut(s) 410, 1026, 1917, 2082, 2153, 2401, 2603
BspMAI CTGCAG 3 cut(s) 1195, 2868, 2898
BspMI ACCTGC 2 cut(s) 765, 2778
BspPI GGATC 8 cut(s) 531, 1144, 1910, 1923, 1950, 2012, 2447, 2897
BspTI CTTAAG 1 cut(s) 2873
BspTNI GGTCTC 1 cut(s) 894
BsrFI RCCGGY 1 cut(s) 1474
BsrI ACTGG 3 cut(s) 843, 2510, 2667
BssAI RCCGGY 1 cut(s) 1474
BssECI CCNNGG 5 cut(s) 1122, 2433, 2573, 2629, 2674
BssNI GRCGYC 1 cut(s) 2741
BssT1I CCWWGG 2 cut(s) 2573, 2629
Bst2UI CCWGG 5 cut(s) 131, 2006, 2156, 2704, 2793
Bst4CI ACNGT 5 cut(s) 701, 762, 864, 1102, 2177
Bst6I CTCTTC 6 cut(s) 411, 1048, 1833, 1839, 1862, 2332
BstACI GRCGYC 1 cut(s) 2741
BstAFI CTTAAG 1 cut(s) 2873
BstAPI GCANNNNNTGC 1 cut(s) 1190
BstC8I GCNNGC 2 cut(s) 1970, 2491
BstDEI CTNAG 6 cut(s) 123, 1172, 1460, 1560, 1808, 1882
BstDSI CCRYGG 2 cut(s) 2433, 2674
BstEII GGTNACC 1 cut(s) 746
BstENI CCTNNNNNAGG 1 cut(s) 1406
BstF5I GGATG 5 cut(s) 943, 1417, 1513, 2266, 2842
BstFNI CGCG 3 cut(s) 2435, 2676, 2738
BstH2I RGCGCY 2 cut(s) 2525, 2829
BstHHI GCGC 5 cut(s) 1974, 1999, 2058, 2524, 2828
BstMAI GTCTC 5 cut(s) 521, 894, 1168, 1244, 2627
BstNI CCWGG 5 cut(s) 131, 2006, 2156, 2704, 2793
BstPI GGTNACC 1 cut(s) 746
BstSCI CCNGG 7 cut(s) 129, 1122, 2004, 2126, 2154, 2702, 2791
BstSFI CTRYAG 3 cut(s) 1191, 2864, 2894
BstUI CGCG 3 cut(s) 2435, 2676, 2738
BstV1I GCAGC 9 cut(s) 623, 1003, 1205, 1564, 2505, 2863, 2866, 2896, 2908
BstV2I GAAGAC 2 cut(s) 1455, 1742
BstX2I RGATCY 2 cut(s) 523, 1915
BstYI RGATCY 2 cut(s) 523, 1915
Bsu15I ATCGAT 1 cut(s) 1152
BsuI GTATCC 2 cut(s) 1434, 2670
BsuRI GGCC 9 cut(s) 590, 809, 1059, 1418, 1864, 2009, 2131, 2634, 2647
BsuTUI ATCGAT 1 cut(s) 1152
BtgI CCRYGG 2 cut(s) 2433, 2674
BtgZI GCGATG 3 cut(s) 485, 885, 1367
BtsCI GGATG 5 cut(s) 943, 1417, 1513, 2266, 2842
BtsIMutI CAGTG 5 cut(s) 285, 697, 850, 983, 1184
BveI ACCTGC 2 cut(s) 765, 2778
Cac8I GCNNGC 2 cut(s) 1970, 2491
CaiI CAGNNNCTG 2 cut(s) 1238, 2421
CciI TCATGA 1 cut(s) 184
CfoI GCGC 5 cut(s) 1974, 1999, 2058, 2524, 2828
Cfr10I RCCGGY 1 cut(s) 1474
Cfr13I GGNCC 7 cut(s) 97, 127, 808, 1058, 2129, 2152, 2918
Cfr42I CCGCGG 2 cut(s) 2436, 2677
ClaI ATCGAT 1 cut(s) 1152
CseI GACGC 3 cut(s) 948, 2474, 2730
Csp6I GTAC 9 cut(s) 139, 694, 1088, 1103, 1434, 1952, 2566, 2611, 2869
CspAI ACCGGT 1 cut(s) 1474
CviQI GTAC 9 cut(s) 139, 694, 1088, 1103, 1434, 1952, 2566, 2611, 2869
DdeI CTNAG 6 cut(s) 123, 1172, 1460, 1560, 1808, 1882
DraI TTTAAA 3 cut(s) 340, 1911, 2071
EaeI YGGCCR 3 cut(s) 588, 2632, 2645
Eam1104I CTCTTC 6 cut(s) 411, 1048, 1833, 1839, 1862, 2332
EarI CTCTTC 6 cut(s) 411, 1048, 1833, 1839, 1862, 2332
EciI GGCGGA 4 cut(s) 1955, 2652, 2739, 2772
Eco130I CCWWGG 2 cut(s) 2573, 2629
Eco147I AGGCCT 1 cut(s) 1864
Eco24I GRGCYC 1 cut(s) 2231
Eco31I GGTCTC 1 cut(s) 894
Eco32I GATATC 2 cut(s) 1156, 2041
Eco47I GGWCC 4 cut(s) 97, 127, 2152, 2918
Eco47III AGCGCT 1 cut(s) 2523
Eco57I CTGAAG 2 cut(s) 1409, 1843
Eco88I CYCGRG 3 cut(s) 518, 741, 2218
Eco91I GGTNACC 1 cut(s) 746
EcoNI CCTNNNNNAGG 1 cut(s) 1406
EcoO109I RGGNCCY 3 cut(s) 1058, 2152, 2918
EcoO65I GGTNACC 1 cut(s) 746
EcoRI GAATTC 2 cut(s) 365, 941
EcoRII CCWGG 5 cut(s) 129, 2004, 2154, 2702, 2791
EcoRV GATATC 2 cut(s) 1156, 2041
EcoT14I CCWWGG 2 cut(s) 2573, 2629
EcoT22I ATGCAT 2 cut(s) 1495, 2644
EcoT38I GRGCYC 1 cut(s) 2231
ErhI CCWWGG 2 cut(s) 2573, 2629
FalI AAGNNNNNCTT 4 cut(s) 1045, 1077, 1939, 1971
FaqI GGGAC 1 cut(s) 2742
FauI CCCGC 2 cut(s) 2428, 2577
FbaI TGATCA 1 cut(s) 181
FblI GTMKAC 1 cut(s) 962
FokI GGATG 5 cut(s) 950, 1424, 1500, 2273, 2849
FriOI GRGCYC 1 cut(s) 2231
FspBI CTAG 9 cut(s) 531, 995, 1091, 1295, 1499, 1700, 1746, 2409, 2922
GlaI GCGC 5 cut(s) 1973, 1998, 2057, 2523, 2827
GsaI CCCAGC 1 cut(s) 1800
HaeII RGCGCY 2 cut(s) 2525, 2829
HaeIII GGCC 9 cut(s) 590, 809, 1059, 1418, 1864, 2009, 2131, 2634, 2647
HapII CCGG 4 cut(s) 1124, 1475, 1517, 2127
HgaI GACGC 3 cut(s) 948, 2474, 2730
HhaI GCGC 5 cut(s) 1974, 1999, 2058, 2524, 2828
Hin1I GRCGYC 1 cut(s) 2741
Hin6I GCGC 5 cut(s) 1972, 1997, 2056, 2522, 2826
HinP1I GCGC 5 cut(s) 1972, 1997, 2056, 2522, 2826
HpaII CCGG 4 cut(s) 1124, 1475, 1517, 2127
HphI GGTGA 2 cut(s) 6, 686
Hpy166II GTNNAC 5 cut(s) 398, 963, 1733, 1952, 2210
Hpy8I GTNNAC 5 cut(s) 398, 963, 1733, 1952, 2210
Hpy99I CGWCG 1 cut(s) 1304
HpyAV CCTTC 8 cut(s) 326, 807, 1271, 1424, 1965, 2086, 2094, 2364
HpyCH4III ACNGT 5 cut(s) 701, 762, 864, 1102, 2177
HpyCH4IV ACGT 3 cut(s) 400, 2061, 2212
HpyF3I CTNAG 6 cut(s) 123, 1172, 1460, 1560, 1808, 1882
HpySE526I ACGT 3 cut(s) 400, 2061, 2212
Hsp92I GRCGYC 1 cut(s) 2741
HspAI GCGC 5 cut(s) 1972, 1997, 2056, 2522, 2826
Kpn2I TCCGGA 1 cut(s) 1516
Ksp22I TGATCA 1 cut(s) 181
KspI CCGCGG 2 cut(s) 2436, 2677
LmnI GCTCC 7 cut(s) 414, 771, 1024, 2080, 2365, 2435, 2607
Lsp1109I GCAGC 9 cut(s) 623, 1003, 1205, 1564, 2505, 2863, 2866, 2896, 2908
LweI GCATC 8 cut(s) 465, 727, 970, 1502, 1822, 2368, 2587, 2686
MaeI CTAG 9 cut(s) 531, 995, 1091, 1295, 1499, 1700, 1746, 2409, 2922
MaeII ACGT 3 cut(s) 400, 2061, 2212
MaeIII GTNAC 6 cut(s) 674, 746, 2300, 2462, 2669, 2830
MfeI CAATTG 2 cut(s) 360, 1178
MflI RGATCY 2 cut(s) 523, 1915
MhlI GDGCHC 5 cut(s) 468, 1072, 1561, 2231, 2318
MlsI TGGCCA 2 cut(s) 2634, 2647
MluNI TGGCCA 2 cut(s) 2634, 2647
MlyI GAGTC 5 cut(s) 105, 428, 1679, 1721, 2629
MmeI TCCRAC 2 cut(s) 174, 1740
Mox20I TGGCCA 2 cut(s) 2634, 2647
Mph1103I ATGCAT 2 cut(s) 1495, 2644
MroI TCCGGA 1 cut(s) 1516
MroXI GAANNNNTTC 4 cut(s) 1112, 1394, 1648, 2587
MscI TGGCCA 2 cut(s) 2634, 2647
MslI CAYNNNNRTG 2 cut(s) 1205, 2596
Msp20I TGGCCA 2 cut(s) 2634, 2647
MspA1I CMGCKG 5 cut(s) 1271, 1542, 1768, 2435, 2676
MspCI CTTAAG 1 cut(s) 2873
MspI CCGG 4 cut(s) 1124, 1475, 1517, 2127
MspR9I CCNGG 7 cut(s) 131, 1124, 2006, 2128, 2156, 2704, 2793
MssI GTTTAAAC 1 cut(s) 340
MunI CAATTG 2 cut(s) 360, 1178
Mva1269I GAATGC 5 cut(s) 289, 1196, 1373, 1781, 2544
MvaI CCWGG 5 cut(s) 131, 2006, 2156, 2704, 2793
MvnI CGCG 3 cut(s) 2435, 2676, 2738
NciI CCSGG 2 cut(s) 1124, 2128
NlaIV GGNNCC 7 cut(s) 410, 1026, 1917, 2082, 2153, 2401, 2603
NmuCI GTSAC 4 cut(s) 674, 2300, 2462, 2830
NsiI ATGCAT 2 cut(s) 1495, 2644
PaeR7I CTCGAG 1 cut(s) 2218
PagI TCATGA 1 cut(s) 184
PceI AGGCCT 1 cut(s) 1864
PcsI WCGNNNNNNNCGW 1 cut(s) 2301
PctI GAATGC 5 cut(s) 289, 1196, 1373, 1781, 2544
PdmI GAANNNNTTC 4 cut(s) 1112, 1394, 1648, 2587
PfeI GAWTC 7 cut(s) 166, 1043, 1108, 1566, 1707, 2405, 2779
PfoI TCCNGGA 2 cut(s) 129, 2154
PinAI ACCGGT 1 cut(s) 1474
PleI GAGTC 5 cut(s) 105, 427, 1678, 1720, 2628
PmeI GTTTAAAC 1 cut(s) 340
PpsI GAGTC 5 cut(s) 105, 427, 1678, 1720, 2628
PpuMI RGGWCCY 2 cut(s) 2152, 2918
Psp5II RGGWCCY 2 cut(s) 2152, 2918
Psp6I CCWGG 5 cut(s) 129, 2004, 2154, 2702, 2791
PspEI GGTNACC 1 cut(s) 746
PspFI CCCAGC 1 cut(s) 1796
PspGI CCWGG 5 cut(s) 129, 2004, 2154, 2702, 2791
PspN4I GGNNCC 7 cut(s) 410, 1026, 1917, 2082, 2153, 2401, 2603
PspPI GGNCC 7 cut(s) 97, 127, 808, 1058, 2129, 2152, 2918
PspPPI RGGWCCY 2 cut(s) 2152, 2918
PspXI VCTCGAGB 1 cut(s) 2218
PsrI GAACNNNNNNTAC 2 cut(s) 1470, 1502
PstI CTGCAG 3 cut(s) 1195, 2868, 2898
PstNI CAGNNNCTG 2 cut(s) 1238, 2421
PsuI RGATCY 2 cut(s) 523, 1915
PvuII CAGCTG 1 cut(s) 1271
RsaI GTAC 9 cut(s) 140, 695, 1089, 1104, 1435, 1953, 2567, 2612, 2870
RsaNI GTAC 9 cut(s) 139, 694, 1088, 1103, 1434, 1952, 2566, 2611, 2869
RseI CAYNNNNRTG 2 cut(s) 1205, 2596
SacII CCGCGG 2 cut(s) 2436, 2677
Sau96I GGNCC 7 cut(s) 97, 127, 808, 1058, 2129, 2152, 2918
SchI GAGTC 5 cut(s) 105, 428, 1679, 1721, 2629
ScrFI CCNGG 7 cut(s) 131, 1124, 2006, 2128, 2156, 2704, 2793
SduI GDGCHC 5 cut(s) 468, 1072, 1561, 2231, 2318
SfaNI GCATC 8 cut(s) 465, 727, 970, 1502, 1822, 2368, 2587, 2686
SfcI CTRYAG 3 cut(s) 1191, 2864, 2894
Sfr274I CTCGAG 1 cut(s) 2218
Sfr303I CCGCGG 2 cut(s) 2436, 2677
SgrBI CCGCGG 2 cut(s) 2436, 2677
SinI GGWCC 4 cut(s) 97, 127, 2152, 2918
SlaI CTCGAG 1 cut(s) 2218
SmiMI CAYNNNNRTG 2 cut(s) 1205, 2596
SmlI CTYRAG 5 cut(s) 1892, 2218, 2224, 2517, 2873
SmoI CTYRAG 5 cut(s) 1892, 2218, 2224, 2517, 2873
SpeI ACTAGT 1 cut(s) 1090
SseBI AGGCCT 1 cut(s) 1864
SspI AATATT 1 cut(s) 2288
SspMI CTAG 9 cut(s) 531, 995, 1091, 1295, 1499, 1700, 1746, 2409, 2922
StuI AGGCCT 1 cut(s) 1864
StyD4I CCNGG 7 cut(s) 129, 1122, 2004, 2126, 2154, 2702, 2791
StyI CCWWGG 2 cut(s) 2573, 2629
TaaI ACNGT 5 cut(s) 701, 762, 864, 1102, 2177
TaiI ACGT 3 cut(s) 403, 2064, 2215
TatI WGTACW 3 cut(s) 138, 1087, 2610
TauI GCSGC 5 cut(s) 447, 590, 611, 2741, 2860
TfiI GAWTC 7 cut(s) 166, 1043, 1108, 1566, 1707, 2405, 2779
TscAI CASTG 5 cut(s) 285, 704, 850, 990, 1191
TseFI GTSAC 4 cut(s) 674, 2300, 2462, 2830
TseI GCWGC 9 cut(s) 611, 1016, 1193, 1577, 2493, 2851, 2854, 2896, 2909
Tsp45I GTSAC 4 cut(s) 674, 2300, 2462, 2830
TspGWI ACGGA 4 cut(s) 1833, 2175, 2594, 2849
TspRI CASTG 5 cut(s) 285, 704, 850, 990, 1191
Vha464I CTTAAG 1 cut(s) 2873
VpaK11BI GGWCC 4 cut(s) 97, 127, 2152, 2918
XagI CCTNNNNNAGG 1 cut(s) 1406
XapI RAATTY 8 cut(s) 197, 365, 941, 1646, 2167, 2307, 2551, 2650
XcmI CCANNNNNNNNNTGG 3 cut(s) 380, 598, 1660
XhoI CTCGAG 1 cut(s) 2218
XmiI GTMKAC 1 cut(s) 962
XmnI GAANNNNTTC 4 cut(s) 1112, 1394, 1648, 2587
XspI CTAG 9 cut(s) 531, 995, 1091, 1295, 1499, 1700, 1746, 2409, 2922
Zsp2I ATGCAT 2 cut(s) 1495, 2644
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.