Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0002793

Physical Location & Seq

Genomic Coordinates Reverse (-)

59531112 .. 59535330

Gene Structure 4219 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0438000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1068 bp

ATGTCAGGGTCTTCCAGGGGCCAAGTCACCATTACGCTTGGGCGTGGCCAGGTAGTAAAGAGGGCTGTTTCGGGTTCGGGTGCTGAGTCTCTGCCCGCGGCCGGGACGAAACGGTCGGTTAGAGATAGGTTAGGGAGTAATGCTGATAGCTCTGTGTCGAATGGAAGTGTAGGCAACAGCAACAGCAACAAACGCCAGCGAGGACATAGTGGTATGTCAAGTTTGAACTCCAATGGTTGTGATGATCCATGCATTGGTAAAGACGACCTCCGGTTTAAACTCATGCAAAAAAATGCATTTAGACGGGCTCAGAGTGATGATGATGATCAGAGGCATGGAGATCTTCGTGAGAAGCTGTCAAAGGCAGTTCAGCGTCCTGTTCCTAGCATTGAATCACGGTCACGGCAGCGCCTGCCTGAACCACAAGAGAGTGGTTTTTTCGGTCGAGTTCCTTCTACGAGAAGTGCAGATGTTTTGCCTCGAGGCCCTGCTACAAGAAGTGCAGATGATTTGCCTCATATGGACTCGTTGAGAAATTCTTATTCTCCTTGGACACTGGACCATTTACGACAAAGATCCCCAGAAAGAGTTCAAGTCACTTATAGGGGTCTCTCCCCTCAGAGGAACGTAGAAGACTTGCAGAGAAGGCCATTAAACAGGACATATGATGACGGCAGATCTGTTCCATATATGAACAAAGATGTTCTAGACGCTACAAGGCCTGCGAGTACTGCACCTTTCATGTCTAATACTGCACTGCCTCCTGGACCTGCAAAGCATATGGCAGCCGCCCCGCCCCATATGAACCAAGTTCCTCCACTGAGTAGCACTGTACAGAAACCTCCATATGTGGGTGATGAACAACAGACAGTAGATGGCTTGCTGCAACACCTCGGATTGGGAAAATATGCCATTATATTCAAGGCTGAGGAAATTGATATGACTGCATTGAAGCAGATGGGAGAAAATGACCTCAAAGAGCTGGGAATACCTATGGGACCTAGGAAAAAGCTTCTGCTTGCTCTCTTACCTCGTTCCAAGCGGCCACTGCCCACAAATATACGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000184 GO:0000723 GO:0000956 GO:0003674 GO:0003676 GO:0003677 GO:0003723 GO:0003824 GO:0004518 GO:0004540 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005697 GO:0005737 GO:0006139 GO:0006259 GO:0006278 GO:0006401 GO:0006402 GO:0006403 GO:0006405 GO:0006406 GO:0006611 GO:0006725 GO:0006807 GO:0006810 GO:0006886 GO:0006913 GO:0006996 GO:0007004 GO:0008104 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009058 GO:0009059 GO:0009892 GO:0009894 GO:0009987 GO:0010467 GO:0010468 GO:0010605 GO:0010608 GO:0010629 GO:0010833 GO:0015031 GO:0015833 GO:0015931 GO:0016043 GO:0016070 GO:0016071 GO:0016787 GO:0016788 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0019439 GO:0031323 GO:0031329 GO:0031503 GO:0032200 GO:0032991 GO:0033036 GO:0034613 GO:0034641 GO:0034645 GO:0034654 GO:0034655 GO:0042162 GO:0042592 GO:0042886 GO:0043021 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043487 GO:0043565 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044260 GO:0044265 GO:0044270 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0044877 GO:0045184 GO:0046483 GO:0046700 GO:0046907 GO:0048519 GO:0050657 GO:0050658 GO:0050789 GO:0050794 GO:0051028 GO:0051168 GO:0051169 GO:0051171 GO:0051179 GO:0051234 GO:0051236 GO:0051252 GO:0051276 GO:0051641 GO:0051649 GO:0060249 GO:0060255 GO:0065007 GO:0065008 GO:0070034 GO:0070727 GO:0071166 GO:0071426 GO:0071427 GO:0071702 GO:0071704 GO:0071705 GO:0071840 GO:0071897 GO:0080090 GO:0090304 GO:0090305 GO:0090501 GO:0097159 GO:0140098 GO:1901360 GO:1901361 GO:1901362 GO:1901363 GO:1901575 GO:1901576 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03015 map03015

Pfam Domains

Protein Families

EST1 EST1_DNA_bind

Protein Analysis

355

Amino Acids

38.98

Weight (kDa)

10.12

Isoelectric Point (pI)

64.72

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SAM_1	PF00536	288 - 342	2.4e-13	SAM domain (Sterile alpha motif)
SAM_2	PF07647	289 - 341	2.8e-08	SAM domain (Sterile alpha motif)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002793)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G28260 AT1G28260
fragaria_vesca	FvH4_3g09000 FvH4_3g09000 FvH4_3g09000 FvH4_3g09000 FvH4_3g09000 FvH4_3g09000 FvH4_3g09000 FvH4_3g09000 FvH4_3g09000 FvH4_3g09000 FvH4_3g09000 FvH4_3g09000 FvH4_3g09000 FvH4_3g09000 FvH4_3g09000
malus_domestica	MD00G1116100.v1.1 MD10G1292700.v1.1
prunus_persica	Prupe.4G049100_v2.0.a1 Prupe.4G049100_v2.0.a1 Prupe.4G049100_v2.0.a1 Prupe.4G049100_v2.0.a1 Prupe.4G049100_v2.0.a1
pyrus_communis	pycom05g28930 pycom10g24480
rosa_chinensis	RchiOBHm_Chr5g0008711
rosa_laevigata	RLG00000031594
rosa_multiflora	Rmu_sc0004761.1_g000007 Rmu_sc0004761.1_g000008
rosa_roxburghii	Rroxscaffold_1G00067880
rosa_rugosa	Rorug04G0437800 Rorug04G0437900 Rorug04G0438000
rosa_samantha	Rh5AG066700 Rh5BG063800 Rh5CG074200 Rh5DG062400
rosa_wichuraiana	Rw5G006220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	112
AbsI	CCTCGAGG	1 cut(s)	480
Acc36I	ACCTGC	1 cut(s)	778
AccB7I	CCANNNNNTGG	1 cut(s)	254
AccII	CGCG	1 cut(s)	98
AciI	CCGC	5 cut(s)	96, 98, 789, 794, 1042
AclWI	GGATC	2 cut(s)	239, 570
AcoI	YGGCCR	3 cut(s)	46, 99, 1043
AcsI	RAATTY	1 cut(s)	535
AfaI	GTAC	2 cut(s)	730, 834
AfiI	CCNNNNNNNGG	6 cut(s)	101, 102, 254, 621, 851, 898
AgsI	TTSAA	5 cut(s)	226, 392, 593, 922, 952
AjnI	CCWGG	3 cut(s)	14, 48, 763
AluBI	AGCT	4 cut(s)	150, 355, 982, 1012
AluI	AGCT	4 cut(s)	150, 355, 982, 1012
Alw26I	GTCTC	2 cut(s)	93, 614
AlwI	GGATC	2 cut(s)	239, 570
AlwNI	CAGNNNCTG	1 cut(s)	412
Ama87I	CYCGRG	1 cut(s)	480
AoxI	GGCC	7 cut(s)	19, 46, 99, 484, 647, 719, 1043
ApeKI	GCWGC	3 cut(s)	406, 785, 883
ApoI	RAATTY	1 cut(s)	535
Asp700I	GAANNNNTTC	1 cut(s)	588
AspA2I	CCTAGG	1 cut(s)	1001
AspLEI	GCGC	1 cut(s)	411
AspS9I	GGNCC	5 cut(s)	19, 485, 559, 767, 998
AsuC2I	CCSGG	1 cut(s)	103
AsuHPI	GGTGA	2 cut(s)	19, 866
AvaI	CYCGRG	1 cut(s)	480
AvaII	GGWCC	3 cut(s)	559, 767, 998
AvrII	CCTAGG	1 cut(s)	1001
BalI	TGGCCA	1 cut(s)	48
BanII	GRGCYC	1 cut(s)	310
BbsI	GAAGAC	2 cut(s)	3, 639
BbvCI	CCTCAGC	1 cut(s)	927
BbvI	GCAGC	3 cut(s)	418, 797, 870
BccI	CCATC	2 cut(s)	869, 952
BceAI	ACGGC	2 cut(s)	419, 688
BciT130I	CCWGG	3 cut(s)	16, 50, 765
BclI	TGATCA	1 cut(s)	325
BcnI	CCSGG	1 cut(s)	103
BcoDI	GTCTC	2 cut(s)	93, 614
BfaI	CTAG	3 cut(s)	384, 707, 1002
BfoI	RGCGCY	1 cut(s)	412
BfuAI	ACCTGC	1 cut(s)	778
BglII	AGATCT	2 cut(s)	340, 677
BisI	GCNGC	6 cut(s)	99, 407, 786, 789, 884, 1043
BlnI	CCTAGG	1 cut(s)	1001
BlsI	GCNGC	6 cut(s)	100, 408, 787, 790, 885, 1044
BmcAI	AGTACT	1 cut(s)	730
Bme1390I	CCNGG	4 cut(s)	16, 50, 103, 765
Bme18I	GGWCC	3 cut(s)	559, 767, 998
BmeT110I	CYCGRG	1 cut(s)	480
BmgT120I	GGNCC	5 cut(s)	19, 485, 559, 767, 998
BmiI	GGNNCC	2 cut(s)	20, 999
BmrFI	CCNGG	4 cut(s)	16, 50, 103, 765
BpiI	GAAGAC	2 cut(s)	3, 639
Bpu10I	CCTNAGC	1 cut(s)	927
BpuMI	CCSGG	1 cut(s)	103
BsaBI	GATNNNNATC	1 cut(s)	324
BsaI	GGTCTC	1 cut(s)	614
BsaJI	CCNNGG	5 cut(s)	15, 96, 548, 892, 1001
BsaWI	WCCGGW	1 cut(s)	270
Bsc4I	CCNNNNNNNGG	6 cut(s)	101, 102, 254, 621, 851, 898
Bse1I	ACTGG	1 cut(s)	561
Bse8I	GATNNNNATC	1 cut(s)	324
BseBI	CCWGG	3 cut(s)	16, 50, 765
BseDI	CCNNGG	5 cut(s)	15, 96, 548, 892, 1001
BseJI	GATNNNNATC	1 cut(s)	324
BseLI	CCNNNNNNNGG	6 cut(s)	101, 102, 254, 621, 851, 898
BseMII	CTCAG	5 cut(s)	75, 323, 632, 812, 918
BseNI	ACTGG	1 cut(s)	561
BseX3I	CGGCCG	1 cut(s)	99
BseXI	GCAGC	3 cut(s)	418, 797, 870
BseYI	CCCAGC	1 cut(s)	982
BsgI	GTGCAG	4 cut(s)	486, 522, 717, 738
Bsh1236I	CGCG	1 cut(s)	98
Bsh1285I	CGRYCG	3 cut(s)	102, 116, 445
BshFI	GGCC	7 cut(s)	21, 48, 101, 486, 649, 721, 1045
BsiEI	CGRYCG	3 cut(s)	102, 116, 445
BsiHKCI	CYCGRG	1 cut(s)	480
BsiSI	CCGG	2 cut(s)	102, 271
BslFI	GGGAC	2 cut(s)	118, 1011
BslI	CCNNNNNNNGG	6 cut(s)	101, 102, 254, 621, 851, 898
BsmAI	GTCTC	2 cut(s)	93, 614
BsmFI	GGGAC	2 cut(s)	118, 1011
BsnI	GGCC	7 cut(s)	21, 48, 101, 486, 649, 721, 1045
Bso31I	GGTCTC	1 cut(s)	614
BsoBI	CYCGRG	1 cut(s)	480
Bsp1286I	GDGCHC	1 cut(s)	310
Bsp1407I	TGTACA	1 cut(s)	832
Bsp143I	GATC	5 cut(s)	244, 325, 340, 575, 677
BspACI	CCGC	5 cut(s)	96, 98, 789, 794, 1042
BspANI	GGCC	7 cut(s)	21, 48, 101, 486, 649, 721, 1045
BspCNI	CTCAG	5 cut(s)	76, 322, 631, 813, 919
BspFNI	CGCG	1 cut(s)	98
BspLI	GGNNCC	2 cut(s)	20, 999
BspMI	ACCTGC	1 cut(s)	778
BspPI	GGATC	2 cut(s)	239, 570
BspTNI	GGTCTC	1 cut(s)	614
BsrGI	TGTACA	1 cut(s)	832
BsrI	ACTGG	1 cut(s)	561
BssECI	CCNNGG	5 cut(s)	15, 96, 548, 892, 1001
BssMI	GATC	5 cut(s)	244, 325, 340, 575, 677
BssT1I	CCWWGG	2 cut(s)	548, 1001
Bst2UI	CCWGG	3 cut(s)	16, 50, 765
Bst4CI	ACNGT	4 cut(s)	114, 399, 832, 871
BstAPI	GCANNNNNTGC	1 cut(s)	412
BstAUI	TGTACA	1 cut(s)	832
BstC8I	GCNNGC	6 cut(s)	96, 197, 413, 723, 881, 1020
BstDEI	CTNAG	5 cut(s)	84, 309, 618, 821, 927
BstDSI	CCRYGG	1 cut(s)	96
BstFNI	CGCG	1 cut(s)	98
BstH2I	RGCGCY	1 cut(s)	412
BstHHI	GCGC	1 cut(s)	411
BstKTI	GATC	5 cut(s)	247, 328, 343, 578, 680
BstMAI	GTCTC	2 cut(s)	93, 614
BstMBI	GATC	5 cut(s)	244, 325, 340, 575, 677
BstMCI	CGRYCG	3 cut(s)	102, 116, 445
BstMWI	GCNNNNNNNGC	5 cut(s)	192, 412, 646, 731, 1048
BstNI	CCWGG	3 cut(s)	16, 50, 765
BstSCI	CCNGG	4 cut(s)	14, 48, 101, 763
BstUI	CGCG	1 cut(s)	98
BstV1I	GCAGC	3 cut(s)	418, 797, 870
BstV2I	GAAGAC	2 cut(s)	3, 639
BstX2I	RGATCY	3 cut(s)	340, 575, 677
BstYI	RGATCY	3 cut(s)	340, 575, 677
BstZI	CGGCCG	1 cut(s)	99
BsuRI	GGCC	7 cut(s)	21, 48, 101, 486, 649, 721, 1045
BtgI	CCRYGG	1 cut(s)	96
BtsI	GCAGTG	2 cut(s)	755, 1046
BtsIMutI	CAGTG	5 cut(s)	554, 755, 818, 828, 1046
BveI	ACCTGC	1 cut(s)	778
Cac8I	GCNNGC	6 cut(s)	96, 197, 413, 723, 881, 1020
CaiI	CAGNNNCTG	1 cut(s)	412
CfoI	GCGC	1 cut(s)	411
Cfr13I	GGNCC	5 cut(s)	19, 485, 559, 767, 998
Cfr42I	CCGCGG	1 cut(s)	99
CseI	GACGC	2 cut(s)	362, 719
Csp6I	GTAC	2 cut(s)	729, 833
CviAII	CATG	4 cut(s)	249, 283, 335, 742
CviQI	GTAC	2 cut(s)	729, 833
DdeI	CTNAG	5 cut(s)	84, 309, 618, 821, 927
DpnI	GATC	5 cut(s)	246, 327, 342, 577, 679
DpnII	GATC	5 cut(s)	244, 325, 340, 575, 677
DraI	TTTAAA	1 cut(s)	277
DrdI	GACNNNNNNGTC	1 cut(s)	112
DseDI	GACNNNNNNGTC	1 cut(s)	112
EaeI	YGGCCR	3 cut(s)	46, 99, 1043
EagI	CGGCCG	1 cut(s)	99
EclXI	CGGCCG	1 cut(s)	99
Eco130I	CCWWGG	2 cut(s)	548, 1001
Eco147I	AGGCCT	1 cut(s)	721
Eco24I	GRGCYC	1 cut(s)	310
Eco31I	GGTCTC	1 cut(s)	614
Eco47I	GGWCC	3 cut(s)	559, 767, 998
Eco52I	CGGCCG	1 cut(s)	99
Eco88I	CYCGRG	1 cut(s)	480
EcoO109I	RGGNCCY	2 cut(s)	485, 998
EcoRII	CCWGG	3 cut(s)	14, 48, 763
EcoT14I	CCWWGG	2 cut(s)	548, 1001
EcoT22I	ATGCAT	2 cut(s)	254, 298
EcoT38I	GRGCYC	1 cut(s)	310
ErhI	CCWWGG	2 cut(s)	548, 1001
FaeI	CATG	4 cut(s)	252, 286, 338, 745
FaqI	GGGAC	2 cut(s)	118, 1011
FatI	CATG	4 cut(s)	248, 282, 334, 741
FauI	CCCGC	2 cut(s)	103, 801
FauNDI	CATATG	5 cut(s)	519, 664, 780, 801, 847
FbaI	TGATCA	1 cut(s)	325
Fnu4HI	GCNGC	6 cut(s)	99, 407, 786, 789, 884, 1043
FriOI	GRGCYC	1 cut(s)	310
Fsp4HI	GCNGC	6 cut(s)	99, 407, 786, 789, 884, 1043
FspBI	CTAG	3 cut(s)	384, 707, 1002
GlaI	GCGC	1 cut(s)	410
GluI	GCNGC	6 cut(s)	99, 407, 786, 789, 884, 1043
GsaI	CCCAGC	1 cut(s)	986
HaeII	RGCGCY	1 cut(s)	412
HaeIII	GGCC	7 cut(s)	21, 48, 101, 486, 649, 721, 1045
HapII	CCGG	2 cut(s)	102, 271
HgaI	GACGC	2 cut(s)	362, 719
HhaI	GCGC	1 cut(s)	411
Hin1II	CATG	4 cut(s)	252, 286, 338, 745
Hin6I	GCGC	1 cut(s)	409
HinP1I	GCGC	1 cut(s)	409
HindIII	AAGCTT	1 cut(s)	1010
HinfI	GANTC	3 cut(s)	86, 392, 524
HpaII	CCGG	2 cut(s)	102, 271
HphI	GGTGA	2 cut(s)	19, 866
Hpy188I	TCNGA	4 cut(s)	312, 330, 621, 896
Hpy188III	TCNNGA	2 cut(s)	347, 707
HpyAV	CCTTC	2 cut(s)	462, 639
HpyCH4III	ACNGT	4 cut(s)	114, 399, 832, 871
HpyCH4IV	ACGT	2 cut(s)	627, 1063
HpyF10VI	GCNNNNNNNGC	5 cut(s)	192, 412, 646, 731, 1048
HpyF3I	CTNAG	5 cut(s)	84, 309, 618, 821, 927
HpySE526I	ACGT	2 cut(s)	627, 1063
Hsp92II	CATG	4 cut(s)	252, 286, 338, 745
HspAI	GCGC	1 cut(s)	409
Ksp22I	TGATCA	1 cut(s)	325
KspI	CCGCGG	1 cut(s)	99
Kzo9I	GATC	5 cut(s)	244, 325, 340, 575, 677
Lsp1109I	GCAGC	3 cut(s)	418, 797, 870
MaeI	CTAG	3 cut(s)	384, 707, 1002
MaeII	ACGT	2 cut(s)	627, 1063
MaeIII	GTNAC	3 cut(s)	25, 399, 595
MalI	GATC	5 cut(s)	246, 327, 342, 577, 679
MboI	GATC	5 cut(s)	244, 325, 340, 575, 677
MboII	GAAGA	3 cut(s)	3, 335, 644
MflI	RGATCY	3 cut(s)	340, 575, 677
MhlI	GDGCHC	1 cut(s)	310
MlsI	TGGCCA	1 cut(s)	48
MluCI	AATT	2 cut(s)	535, 933
MluNI	TGGCCA	1 cut(s)	48
MlyI	GAGTC	2 cut(s)	95, 518
Mox20I	TGGCCA	1 cut(s)	48
Mph1103I	ATGCAT	2 cut(s)	254, 298
MroXI	GAANNNNTTC	1 cut(s)	588
MscI	TGGCCA	1 cut(s)	48
MseI	TTAA	2 cut(s)	276, 653
Msp20I	TGGCCA	1 cut(s)	48
MspA1I	CMGCKG	1 cut(s)	98
MspI	CCGG	2 cut(s)	102, 271
MspR9I	CCNGG	4 cut(s)	16, 50, 103, 765
MssI	GTTTAAAC	1 cut(s)	277
MvaI	CCWGG	3 cut(s)	16, 50, 765
MvnI	CGCG	1 cut(s)	98
MwoI	GCNNNNNNNGC	5 cut(s)	192, 412, 646, 731, 1048
NciI	CCSGG	1 cut(s)	103
NdeI	CATATG	5 cut(s)	519, 664, 780, 801, 847
NdeII	GATC	5 cut(s)	244, 325, 340, 575, 677
NlaIII	CATG	4 cut(s)	252, 286, 338, 745
NlaIV	GGNNCC	2 cut(s)	20, 999
NmuCI	GTSAC	3 cut(s)	25, 399, 595
NsiI	ATGCAT	2 cut(s)	254, 298
PaeR7I	CTCGAG	1 cut(s)	480
PceI	AGGCCT	1 cut(s)	721
PdmI	GAANNNNTTC	1 cut(s)	588
PfeI	GAWTC	1 cut(s)	392
PflMI	CCANNNNNTGG	1 cut(s)	254
PfoI	TCCNGGA	1 cut(s)	763
PkrI	GCNGC	6 cut(s)	100, 408, 787, 790, 885, 1044
PleI	GAGTC	2 cut(s)	94, 518
PmeI	GTTTAAAC	1 cut(s)	277
PpsI	GAGTC	2 cut(s)	94, 518
PpuMI	RGGWCCY	1 cut(s)	998
Psp5II	RGGWCCY	1 cut(s)	998
Psp6I	CCWGG	3 cut(s)	14, 48, 763
PspFI	CCCAGC	1 cut(s)	982
PspGI	CCWGG	3 cut(s)	14, 48, 763
PspN4I	GGNNCC	2 cut(s)	20, 999
PspPI	GGNCC	5 cut(s)	19, 485, 559, 767, 998
PspPPI	RGGWCCY	1 cut(s)	998
PspXI	VCTCGAGB	1 cut(s)	480
PstNI	CAGNNNCTG	1 cut(s)	412
PsuI	RGATCY	3 cut(s)	340, 575, 677
RsaI	GTAC	2 cut(s)	730, 834
RsaNI	GTAC	2 cut(s)	729, 833
SacII	CCGCGG	1 cut(s)	99
SaqAI	TTAA	2 cut(s)	276, 653
SatI	GCNGC	6 cut(s)	99, 407, 786, 789, 884, 1043
Sau3AI	GATC	5 cut(s)	244, 325, 340, 575, 677
Sau96I	GGNCC	5 cut(s)	19, 485, 559, 767, 998
ScaI	AGTACT	1 cut(s)	730
SchI	GAGTC	2 cut(s)	95, 518
ScrFI	CCNGG	4 cut(s)	16, 50, 103, 765
SduI	GDGCHC	1 cut(s)	310
Sfr274I	CTCGAG	1 cut(s)	480
Sfr303I	CCGCGG	1 cut(s)	99
SgrBI	CCGCGG	1 cut(s)	99
SinI	GGWCC	3 cut(s)	559, 767, 998
SlaI	CTCGAG	1 cut(s)	480
SmlI	CTYRAG	1 cut(s)	480
SmoI	CTYRAG	1 cut(s)	480
Sse9I	AATT	2 cut(s)	535, 933
SseBI	AGGCCT	1 cut(s)	721
SsiI	CCGC	5 cut(s)	96, 98, 789, 794, 1042
SspMI	CTAG	3 cut(s)	384, 707, 1002
StuI	AGGCCT	1 cut(s)	721
StyD4I	CCNGG	4 cut(s)	14, 48, 101, 763
StyI	CCWWGG	2 cut(s)	548, 1001
TaaI	ACNGT	4 cut(s)	114, 399, 832, 871
TaiI	ACGT	2 cut(s)	630, 1066
TaqI	TCGA	3 cut(s)	158, 445, 481
TaqII	GACCGA	1 cut(s)	431
TasI	AATT	2 cut(s)	535, 933
TatI	WGTACW	2 cut(s)	728, 832
TauI	GCSGC	3 cut(s)	101, 791, 1045
TfiI	GAWTC	1 cut(s)	392
Tru1I	TTAA	2 cut(s)	276, 653
Tru9I	TTAA	2 cut(s)	276, 653
TscAI	CASTG	5 cut(s)	561, 762, 825, 835, 1053
TseFI	GTSAC	3 cut(s)	25, 399, 595
TseI	GCWGC	3 cut(s)	406, 785, 883
Tsp45I	GTSAC	3 cut(s)	25, 399, 595
TspDTI	ATGAA	4 cut(s)	707, 730, 818, 873
TspRI	CASTG	5 cut(s)	561, 762, 825, 835, 1053
Van91I	CCANNNNNTGG	1 cut(s)	254
VpaK11BI	GGWCC	3 cut(s)	559, 767, 998
XapI	RAATTY	1 cut(s)	535
XbaI	TCTAGA	1 cut(s)	706
XhoI	CTCGAG	1 cut(s)	480
XmaJI	CCTAGG	1 cut(s)	1001
XmnI	GAANNNNTTC	1 cut(s)	588
XspI	CTAG	3 cut(s)	384, 707, 1002
ZrmI	AGTACT	1 cut(s)	730
Zsp2I	ATGCAT	2 cut(s)	254, 298

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.