Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr11

Orthogroup ID

OG0003382

Physical Location & Seq

Genomic Coordinates Forward (+)

11170694 .. 11174808

Gene Structure 4115 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD11G1121200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1455 bp

ATGTTGGATCTTAATCTGAACGTCGTCGTTTCGGGGCCAAACGACGTCGAGTCGTGCGGCACCCAAATGGACGAGTCGGGGACGTCCAACTCGTCCGTTGTCAATGCCGACGCTTCCAGCACCAACGACGACTCGTGCTCCACACGCGCCGCCAGAAACGACGCCGTCACAACCTTCAACTTCGGTATTCTCAAGGTCCAGGGCGGAGACGAAGAAGAAAACGACGACGTTGCCGTGACCAAGGAGCTCTTTCCGGTCACCGGAGGCTTGAACAATTGGCCGGGGCAGGCTCACGGGCATGGGCAGTCCTCTTCATCGTCGCTTTTGGTGAGGAAGAATCTGATGGAGCTTGGGTTCGATCTTGGCGGCTCCGGGGAGGTCAGGTTGGTTCAACAGAAGCAACAACAACAACCAGCTGCGCCGCCGCCGCAGCAGCAGCAGGCGAAGAAGAGCAGGAGAGGGCCGAGGTCGCGTAGCTCTCAGTACAGAGGAGTCACCTTCTACAGAAGAACTGGTAGATGGGAGTCGCACATTTGGGACTGTGGGAAACAAGTGTATTTGGGTGGATTTGACACTGCTCATGCTGCGGCTAGAGCCTACGACCGAGCTGCGATTAAGTTCAGGGGAGTTGATGCTGATATCAATTACAACCTAAGTGATTATGAGGATGATATGAAACAGATGAAGAATTTGACCAAGGAAGAATTCGTGCACATACTACGTCGGCAGAGCACTGGCTTCTCAAGAGGCAGCTCCAGATATAGAGGGGTTACGCTGCACAAATGTGGTCGATGGGAAGCTCGAATGGGACAGTTCCTTGGAAAAAAGTATATATATCTTGGGCTATTCGACAGCGAAGTAGAAGCTGCAAGGGCTTATGACAAGGCAGCGATCAAATGTAATGGAAGGGAAGCGATCACCAACTTTGAGCCAAGCACATATGAAGGGGAGATGATGTCCGAGGCTGGTAATGAAGATGGCAATCACAATCTTGATCTGAATTTGGGGATATCTCCCCCCTCGTTTGGCACTGGTCAAAAGGAGGGCGAAGGGCATCTTCAGTTCCACTCCAACCCTTTTGACGTGCACAATGGAAAAAGGATGGAGCACAATGTGAATGTAACGATGAGTGATCCACCCTTTAGAGGGCTAATGACATCAGATCACCCACCACCATTGTGGAACGGTGTATACCCTAGTTACTTTCCCAATCAGGAAAGAGCAACAGAGAAGAGACTTGCATTAGGATCTCAAGGACCCCCCAACTGGGATTGGCAAATGCATGGCCAGGTTACCCCAATGCCACTGTTCTCAACTGCAGCATCATCAGGATTCTCATTTTCAGCTAACGCTCCAGCCGCTGCTGTTCACCCCTTACAACCCCCGAACCCAACAGCCCTCAATCTCTGTTTTGCTTCACCAGCCATGGCTGCCACCCACACATCTCAACAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AP2

Protein Analysis

485

Amino Acids

53.16

Weight (kDa)

6.21

Isoelectric Point (pI)

53.03

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AP2	PF00847	161 - 209	6.2e-10	AP2 domain
AP2	PF00847	252 - 302	1e-08	AP2 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003382)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G28550 AT2G28550 AT2G28550 AT2G28550 AT2G28550 AT2G28550 AT5G67180 AT5G67180 AT5G67180
fragaria_vesca	FvH4_3g33940 FvH4_3g33940 FvH4_3g33940 FvH4_3g33940 FvH4_3g33940 FvH4_3g33940 FvH4_3g33940
malus_domestica	MD03G1107900.v1.1 MD11G1121200.v1.1
prunus_persica	Prupe.6G091100_v2.0.a1 Prupe.6G091100_v2.0.a1 Prupe.6G091100_v2.0.a1
pyrus_communis	pycom03g08790 pycom11g10230
rosa_chinensis	RchiOBHm_Chr5g0061491 RchiOBHm_Chr5g0061501
rosa_laevigata	RLG00000035482
rosa_multiflora	Rmu_sc0006126.1_g000010
rosa_roxburghii	Rroxscaffold_1G00019170
rosa_rugosa	Rorug05G0341000 Rorug05G0341100 Rorug05G0341200
rosa_samantha	Rh5AG403200 Rh5BG415600 Rh5CG440300 Rh5DG430100
rosa_wichuraiana	Rw5G037920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	2 cut(s)	48, 86
AccB1I	GGYRCC	1 cut(s)	59
AccI	GTMKAC	1 cut(s)	1191
AccII	CGCG	2 cut(s)	147, 472
AciI	CCGC	9 cut(s)	57, 150, 204, 366, 422, 425, 428, 587, 1359
AclWI	GGATC	3 cut(s)	15, 1127, 1255
AcoI	YGGCCR	2 cut(s)	278, 1285
AcsI	RAATTY	3 cut(s)	688, 704, 1000
AcuI	CTGAAG	1 cut(s)	1043
AcyI	GRCGYC	3 cut(s)	45, 83, 162
AdeI	CACNNNGTG	1 cut(s)	1114
AfaI	GTAC	1 cut(s)	485
AfiI	CCNNNNNNNGG	6 cut(s)	260, 1025, 1145, 1146, 1266, 1267
AgsI	TTSAA	3 cut(s)	178, 271, 392
AhdI	GACNNNNNGTC	1 cut(s)	49
AjiI	CACGTC	1 cut(s)	1084
AjnI	CCWGG	2 cut(s)	198, 1287
AjuI	GAANNNNNNNTTGG	2 cut(s)	689, 721
AleI	CACNNNNGTG	2 cut(s)	783, 1177
AloI	GAACNNNNNNTCC	2 cut(s)	338, 370
AluBI	AGCT	9 cut(s)	247, 349, 416, 477, 608, 753, 800, 866, 1346
AluI	AGCT	9 cut(s)	247, 349, 416, 477, 608, 753, 800, 866, 1346
Alw21I	GWGCWC	6 cut(s)	140, 249, 714, 734, 1089, 1110
Alw26I	GTCTC	2 cut(s)	201, 1228
Alw44I	GTGCAC	2 cut(s)	710, 1085
AlwI	GGATC	3 cut(s)	15, 1127, 1255
AlwNI	CAGNNNCTG	1 cut(s)	1361
AoxI	GGCC	4 cut(s)	35, 278, 461, 1285
ApaLI	GTGCAC	2 cut(s)	710, 1085
ApoI	RAATTY	3 cut(s)	688, 704, 1000
AspLEI	GCGC	2 cut(s)	149, 421
AspS9I	GGNCC	4 cut(s)	35, 196, 461, 1256
AsuC2I	CCSGG	2 cut(s)	282, 373
AsuHPI	GGTGA	7 cut(s)	250, 340, 487, 910, 1157, 1361, 1410
AvaII	GGWCC	2 cut(s)	196, 1256
BaeGI	GKGCMC	2 cut(s)	714, 1089
BalI	TGGCCA	1 cut(s)	1287
BanI	GGYRCC	1 cut(s)	59
BanII	GRGCYC	1 cut(s)	249
BauI	CACGAG	1 cut(s)	133
Bbv12I	GWGCWC	6 cut(s)	140, 249, 714, 734, 1089, 1110
BccI	CCATC	5 cut(s)	337, 513, 786, 971, 1096
BceAI	ACGGC	2 cut(s)	149, 218
BcgI	CGANNNNNNTGC	4 cut(s)	212, 246, 590, 624
BciT130I	CCWGG	2 cut(s)	200, 1289
BcnI	CCSGG	2 cut(s)	282, 373
BcoDI	GTCTC	2 cut(s)	201, 1228
BfaI	CTAG	2 cut(s)	591, 1197
BfmI	CTRYAG	2 cut(s)	502, 1317
Bme1390I	CCNGG	4 cut(s)	200, 282, 373, 1289
Bme18I	GGWCC	2 cut(s)	196, 1256
BmeRI	GACNNNNNGTC	1 cut(s)	49
BmgBI	CACGTC	1 cut(s)	1084
BmgT120I	GGNCC	4 cut(s)	35, 196, 461, 1256
BmiI	GGNNCC	4 cut(s)	36, 61, 370, 1258
BmrFI	CCNGG	4 cut(s)	200, 282, 373, 1289
BmrI	ACTGGG	1 cut(s)	1276
BmsI	GCATC	3 cut(s)	622, 1063, 1331
BmuI	ACTGGG	1 cut(s)	1276
BpmI	CTGGAG	2 cut(s)	739, 1338
BpuEI	CTTGAG	3 cut(s)	176, 727, 1236
BpuMI	CCSGG	2 cut(s)	282, 373
BsaBI	GATNNNNATC	2 cut(s)	12, 981
BsaHI	GRCGYC	3 cut(s)	45, 83, 162
BsaJI	CCNNGG	9 cut(s)	199, 240, 281, 372, 464, 696, 817, 960, 1425
BsaWI	WCCGGW	2 cut(s)	253, 260
BsaXI	ACNNNNNCTCC	8 cut(s)	122, 152, 338, 368, 368, 398, 941, 971
Bsc4I	CCNNNNNNNGG	6 cut(s)	260, 1025, 1145, 1146, 1266, 1267
Bse1I	ACTGG	4 cut(s)	517, 739, 1036, 1271
Bse8I	GATNNNNATC	2 cut(s)	12, 981
BseBI	CCWGG	2 cut(s)	200, 1289
BseDI	CCNNGG	9 cut(s)	199, 240, 281, 372, 464, 696, 817, 960, 1425
BseGI	GGATG	2 cut(s)	673, 1107
BseJI	GATNNNNATC	2 cut(s)	12, 981
BseLI	CCNNNNNNNGG	6 cut(s)	260, 1025, 1145, 1146, 1266, 1267
BseMII	CTCAG	1 cut(s)	494
BseNI	ACTGG	4 cut(s)	517, 739, 1036, 1271
BseRI	GAGGAG	1 cut(s)	504
BseSI	GKGCMC	2 cut(s)	714, 1089
BsgI	GTGCAG	1 cut(s)	761
Bsh1236I	CGCG	2 cut(s)	147, 472
Bsh1285I	CGRYCG	1 cut(s)	604
BshFI	GGCC	4 cut(s)	37, 280, 463, 1287
BshNI	GGYRCC	1 cut(s)	59
BsiEI	CGRYCG	1 cut(s)	604
BsiHKAI	GWGCWC	6 cut(s)	140, 249, 714, 734, 1089, 1110
BsiSI	CCGG	4 cut(s)	254, 261, 281, 372
BslFI	GGGAC	3 cut(s)	94, 551, 822
BslI	CCNNNNNNNGG	6 cut(s)	260, 1025, 1145, 1146, 1266, 1267
BsmAI	GTCTC	2 cut(s)	201, 1228
BsmBI	CGTCTC	1 cut(s)	201
BsmFI	GGGAC	3 cut(s)	94, 551, 822
BsnI	GGCC	4 cut(s)	37, 280, 463, 1287
Bsp1286I	GDGCHC	6 cut(s)	140, 249, 714, 734, 1089, 1110
Bsp143I	GATC	8 cut(s)	7, 358, 891, 915, 994, 1132, 1162, 1247
Bsp19I	CCATGG	1 cut(s)	1425
BspACI	CCGC	9 cut(s)	57, 150, 204, 366, 422, 425, 428, 587, 1359
BspANI	GGCC	4 cut(s)	37, 280, 463, 1287
BspCNI	CTCAG	1 cut(s)	493
BspFNI	CGCG	2 cut(s)	147, 472
BspLI	GGNNCC	4 cut(s)	36, 61, 370, 1258
BspMAI	CTGCAG	1 cut(s)	1321
BspPI	GGATC	3 cut(s)	15, 1127, 1255
BspQI	GCTCTTC	1 cut(s)	443
BspT107I	GGYRCC	1 cut(s)	59
BsrI	ACTGG	4 cut(s)	517, 739, 1036, 1271
BssECI	CCNNGG	9 cut(s)	199, 240, 281, 372, 464, 696, 817, 960, 1425
BssMI	GATC	8 cut(s)	7, 358, 891, 915, 994, 1132, 1162, 1247
BssNAI	GTATAC	1 cut(s)	1192
BssNI	GRCGYC	3 cut(s)	45, 83, 162
BssSI	CACGAG	1 cut(s)	133
BssT1I	CCWWGG	4 cut(s)	240, 696, 817, 1425
Bst1107I	GTATAC	1 cut(s)	1192
Bst2BI	CACGAG	1 cut(s)	133
Bst2UI	CCWGG	2 cut(s)	200, 1289
Bst4CI	ACNGT	4 cut(s)	542, 813, 1187, 1308
Bst6I	CTCTTC	3 cut(s)	316, 443, 1226
BstACI	GRCGYC	3 cut(s)	45, 83, 162
BstC8I	GCNNGC	2 cut(s)	288, 441
BstDEI	CTNAG	2 cut(s)	480, 653
BstDSI	CCRYGG	1 cut(s)	1425
BstEII	GGTNACC	2 cut(s)	256, 1291
BstF5I	GGATG	2 cut(s)	673, 1107
BstFNI	CGCG	2 cut(s)	147, 472
BstHHI	GCGC	2 cut(s)	149, 421
BstKTI	GATC	8 cut(s)	10, 361, 894, 918, 997, 1135, 1165, 1250
BstMAI	GTCTC	2 cut(s)	201, 1228
BstMBI	GATC	8 cut(s)	7, 358, 891, 915, 994, 1132, 1162, 1247
BstMCI	CGRYCG	1 cut(s)	604
BstNI	CCWGG	2 cut(s)	200, 1289
BstPI	GGTNACC	2 cut(s)	256, 1291
BstSCI	CCNGG	4 cut(s)	198, 280, 371, 1287
BstSFI	CTRYAG	2 cut(s)	502, 1317
BstSLI	GKGCMC	2 cut(s)	714, 1089
BstUI	CGCG	2 cut(s)	147, 472
BstX2I	RGATCY	2 cut(s)	7, 1247
BstXI	CCANNNNNNTGG	1 cut(s)	1179
BstYI	RGATCY	2 cut(s)	7, 1247
BstZ17I	GTATAC	1 cut(s)	1192
BsuRI	GGCC	4 cut(s)	37, 280, 463, 1287
BtgI	CCRYGG	1 cut(s)	1425
BtrI	CACGTC	1 cut(s)	1084
BtsCI	GGATG	2 cut(s)	673, 1107
BtsI	GCAGTG	1 cut(s)	573
BtsIMutI	CAGTG	4 cut(s)	573, 732, 1029, 1304
Cac8I	GCNNGC	2 cut(s)	288, 441
CaiI	CAGNNNCTG	1 cut(s)	1361
CfoI	GCGC	2 cut(s)	149, 421
Cfr13I	GGNCC	4 cut(s)	35, 196, 461, 1256
CseI	GACGC	2 cut(s)	119, 170
Csp6I	GTAC	1 cut(s)	484
CspCI	CAANNNNNGTGG	2 cut(s)	1158, 1193
CviAII	CATG	4 cut(s)	299, 581, 1283, 1426
CviQI	GTAC	1 cut(s)	484
DdeI	CTNAG	2 cut(s)	480, 653
DpnI	GATC	8 cut(s)	9, 360, 893, 917, 996, 1134, 1164, 1249
DpnII	GATC	8 cut(s)	7, 358, 891, 915, 994, 1132, 1162, 1247
DraIII	CACNNNGTG	1 cut(s)	1114
DriI	GACNNNNNGTC	1 cut(s)	49
EaeI	YGGCCR	2 cut(s)	278, 1285
Eam1104I	CTCTTC	3 cut(s)	316, 443, 1226
Eam1105I	GACNNNNNGTC	1 cut(s)	49
EarI	CTCTTC	3 cut(s)	316, 443, 1226
EciI	GGCGGA	1 cut(s)	219
Ecl136II	GAGCTC	1 cut(s)	247
Eco130I	CCWWGG	4 cut(s)	240, 696, 817, 1425
Eco24I	GRGCYC	1 cut(s)	249
Eco32I	GATATC	2 cut(s)	640, 1011
Eco47I	GGWCC	2 cut(s)	196, 1256
Eco53kI	GAGCTC	1 cut(s)	247
Eco57I	CTGAAG	1 cut(s)	1043
Eco91I	GGTNACC	2 cut(s)	256, 1291
EcoICRI	GAGCTC	1 cut(s)	247
EcoO109I	RGGNCCY	1 cut(s)	1256
EcoO65I	GGTNACC	2 cut(s)	256, 1291
EcoRI	GAATTC	1 cut(s)	704
EcoRII	CCWGG	2 cut(s)	198, 1287
EcoRV	GATATC	2 cut(s)	640, 1011
EcoT14I	CCWWGG	4 cut(s)	240, 696, 817, 1425
EcoT22I	ATGCAT	1 cut(s)	1284
EcoT38I	GRGCYC	1 cut(s)	249
ErhI	CCWWGG	4 cut(s)	240, 696, 817, 1425
Esp3I	CGTCTC	1 cut(s)	201
FaeI	CATG	4 cut(s)	302, 584, 1286, 1429
FalI	AAGNNNNNCTT	4 cut(s)	233, 265, 1041, 1073
FaqI	GGGAC	3 cut(s)	94, 551, 822
FatI	CATG	4 cut(s)	298, 580, 1282, 1425
FauNDI	CATATG	1 cut(s)	940
FblI	GTMKAC	1 cut(s)	1191
FokI	GGATG	2 cut(s)	680, 1114
FriOI	GRGCYC	1 cut(s)	249
FspBI	CTAG	2 cut(s)	591, 1197
GlaI	GCGC	2 cut(s)	148, 420
GsuI	CTGGAG	2 cut(s)	739, 1338
HaeIII	GGCC	4 cut(s)	37, 280, 463, 1287
HapII	CCGG	4 cut(s)	254, 261, 281, 372
HgaI	GACGC	2 cut(s)	119, 170
HhaI	GCGC	2 cut(s)	149, 421
Hin1I	GRCGYC	3 cut(s)	45, 83, 162
Hin1II	CATG	4 cut(s)	302, 584, 1286, 1429
Hin6I	GCGC	2 cut(s)	147, 419
HinP1I	GCGC	2 cut(s)	147, 419
HinfI	GANTC	7 cut(s)	50, 74, 131, 337, 492, 524, 1332
HpaII	CCGG	4 cut(s)	254, 261, 281, 372
HphI	GGTGA	7 cut(s)	250, 340, 487, 910, 1157, 1361, 1410
Hpy166II	GTNNAC	4 cut(s)	712, 1087, 1192, 1369
Hpy188I	TCNGA	5 cut(s)	18, 342, 961, 999, 1162
Hpy188III	TCNNGA	5 cut(s)	744, 756, 992, 1214, 1329
Hpy8I	GTNNAC	4 cut(s)	712, 1087, 1192, 1369
HpyAV	CCTTC	5 cut(s)	184, 508, 900, 938, 1043
HpyCH4III	ACNGT	4 cut(s)	542, 813, 1187, 1308
HpyCH4IV	ACGT	6 cut(s)	21, 45, 83, 228, 721, 1083
HpyCH4V	TGCA	7 cut(s)	712, 778, 869, 1087, 1241, 1282, 1319
HpyF3I	CTNAG	2 cut(s)	480, 653
HpySE526I	ACGT	6 cut(s)	21, 45, 83, 228, 721, 1083
Hsp92I	GRCGYC	3 cut(s)	45, 83, 162
Hsp92II	CATG	4 cut(s)	302, 584, 1286, 1429
HspAI	GCGC	2 cut(s)	147, 419
Kzo9I	GATC	8 cut(s)	7, 358, 891, 915, 994, 1132, 1162, 1247
LguI	GCTCTTC	1 cut(s)	443
LmnI	GCTCC	7 cut(s)	143, 244, 346, 374, 758, 1105, 1357
LweI	GCATC	3 cut(s)	622, 1063, 1331
MaeI	CTAG	2 cut(s)	591, 1197
MaeII	ACGT	6 cut(s)	21, 45, 83, 228, 721, 1083
MaeIII	GTNAC	8 cut(s)	166, 235, 256, 493, 769, 1120, 1199, 1291
MalI	GATC	8 cut(s)	9, 360, 893, 917, 996, 1134, 1164, 1249
MboI	GATC	8 cut(s)	7, 358, 891, 915, 994, 1132, 1162, 1247
MfeI	CAATTG	1 cut(s)	274
MflI	RGATCY	2 cut(s)	7, 1247
MhlI	GDGCHC	6 cut(s)	140, 249, 714, 734, 1089, 1110
MlsI	TGGCCA	1 cut(s)	1287
MluCI	AATT	5 cut(s)	274, 643, 688, 704, 1000
MluNI	TGGCCA	1 cut(s)	1287
MlyI	GAGTC	5 cut(s)	59, 83, 125, 501, 533
MmeI	TCCRAC	2 cut(s)	111, 1095
Mox20I	TGGCCA	1 cut(s)	1287
Mph1103I	ATGCAT	1 cut(s)	1284
MscI	TGGCCA	1 cut(s)	1287
MseI	TTAA	2 cut(s)	12, 615
MslI	CAYNNNNRTG	4 cut(s)	65, 297, 783, 1177
Msp20I	TGGCCA	1 cut(s)	1287
MspA1I	CMGCKG	2 cut(s)	416, 1361
MspI	CCGG	4 cut(s)	254, 261, 281, 372
MspR9I	CCNGG	4 cut(s)	200, 282, 373, 1289
MunI	CAATTG	1 cut(s)	274
MvaI	CCWGG	2 cut(s)	200, 1289
MvnI	CGCG	2 cut(s)	147, 472
NciI	CCSGG	2 cut(s)	282, 373
NcoI	CCATGG	1 cut(s)	1425
NdeI	CATATG	1 cut(s)	940
NdeII	GATC	8 cut(s)	7, 358, 891, 915, 994, 1132, 1162, 1247
NlaIII	CATG	4 cut(s)	302, 584, 1286, 1429
NlaIV	GGNNCC	4 cut(s)	36, 61, 370, 1258
NmeAIII	GCCGAG	1 cut(s)	489
NmuCI	GTSAC	4 cut(s)	166, 235, 256, 493
NsiI	ATGCAT	1 cut(s)	1284
OliI	CACNNNNGTG	2 cut(s)	783, 1177
PciSI	GCTCTTC	1 cut(s)	443
PcsI	WCGNNNNNNNCGW	2 cut(s)	89, 231
PfeI	GAWTC	2 cut(s)	337, 1332
PflFI	GACNNNGTC	1 cut(s)	164
PleI	GAGTC	5 cut(s)	58, 82, 125, 500, 532
PpsI	GAGTC	5 cut(s)	58, 82, 125, 500, 532
PpuMI	RGGWCCY	1 cut(s)	1256
Psp124BI	GAGCTC	1 cut(s)	249
Psp5II	RGGWCCY	1 cut(s)	1256
Psp6I	CCWGG	2 cut(s)	198, 1287
PspEI	GGTNACC	2 cut(s)	256, 1291
PspGI	CCWGG	2 cut(s)	198, 1287
PspN4I	GGNNCC	4 cut(s)	36, 61, 370, 1258
PspPI	GGNCC	4 cut(s)	35, 196, 461, 1256
PspPPI	RGGWCCY	1 cut(s)	1256
PsrI	GAACNNNNNNTAC	2 cut(s)	1175, 1207
PstI	CTGCAG	1 cut(s)	1321
PstNI	CAGNNNCTG	1 cut(s)	1361
PsuI	RGATCY	2 cut(s)	7, 1247
PsyI	GACNNNGTC	1 cut(s)	164
PvuII	CAGCTG	1 cut(s)	416
RsaI	GTAC	1 cut(s)	485
RsaNI	GTAC	1 cut(s)	484
RseI	CAYNNNNRTG	4 cut(s)	65, 297, 783, 1177
SacI	GAGCTC	1 cut(s)	249
SapI	GCTCTTC	1 cut(s)	443
SaqAI	TTAA	2 cut(s)	12, 615
Sau3AI	GATC	8 cut(s)	7, 358, 891, 915, 994, 1132, 1162, 1247
Sau96I	GGNCC	4 cut(s)	35, 196, 461, 1256
SchI	GAGTC	5 cut(s)	59, 83, 125, 501, 533
ScrFI	CCNGG	4 cut(s)	200, 282, 373, 1289
SduI	GDGCHC	6 cut(s)	140, 249, 714, 734, 1089, 1110
SfaNI	GCATC	3 cut(s)	622, 1063, 1331
SfcI	CTRYAG	2 cut(s)	502, 1317
SinI	GGWCC	2 cut(s)	196, 1256
SmiMI	CAYNNNNRTG	4 cut(s)	65, 297, 783, 1177
SmlI	CTYRAG	3 cut(s)	191, 742, 1251
SmoI	CTYRAG	3 cut(s)	191, 742, 1251
Sse9I	AATT	5 cut(s)	274, 643, 688, 704, 1000
SsiI	CCGC	9 cut(s)	57, 150, 204, 366, 422, 425, 428, 587, 1359
SspMI	CTAG	2 cut(s)	591, 1197
SstI	GAGCTC	1 cut(s)	249
StyD4I	CCNGG	4 cut(s)	198, 280, 371, 1287
StyI	CCWWGG	4 cut(s)	240, 696, 817, 1425
TaaI	ACNGT	4 cut(s)	542, 813, 1187, 1308
TaiI	ACGT	6 cut(s)	24, 48, 86, 231, 724, 1086
TaqI	TCGA	5 cut(s)	48, 357, 790, 802, 849
TaqII	GACCGA	1 cut(s)	618
TasI	AATT	5 cut(s)	274, 643, 688, 704, 1000
TatI	WGTACW	1 cut(s)	483
TauI	GCSGC	8 cut(s)	60, 152, 369, 424, 427, 430, 590, 1361
TfiI	GAWTC	2 cut(s)	337, 1332
Tru1I	TTAA	2 cut(s)	12, 615
Tru9I	TTAA	2 cut(s)	12, 615
TscAI	CASTG	4 cut(s)	580, 739, 1036, 1311
TseFI	GTSAC	4 cut(s)	166, 235, 256, 493
Tsp45I	GTSAC	4 cut(s)	166, 235, 256, 493
TspDTI	ATGAA	5 cut(s)	303, 689, 698, 957, 987
TspGWI	ACGGA	1 cut(s)	85
TspRI	CASTG	4 cut(s)	580, 739, 1036, 1311
Tth111I	GACNNNGTC	1 cut(s)	164
VneI	GTGCAC	2 cut(s)	710, 1085
VpaK11BI	GGWCC	2 cut(s)	196, 1256
XapI	RAATTY	3 cut(s)	688, 704, 1000
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1176
XmiI	GTMKAC	1 cut(s)	1191
XspI	CTAG	2 cut(s)	591, 1197
ZraI	GACGTC	2 cut(s)	46, 84
Zsp2I	ATGCAT	1 cut(s)	1284

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.