Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5D

Orthogroup ID

OG0003382

Physical Location & Seq

Genomic Coordinates Reverse (-)

68713310 .. 68717888

Gene Structure 4579 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5DG430100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1089 bp

ATGTTGGATCTTAATCTCAGCGTGCTGGGATCGTCGTCGGAACAAAACGACGTCTTCGTCGTCGGCTCGTTTCCGGAAGGCTCCGGCAGCGCGACGCAAATGGACGAGTCCGGGACGTCCAACTCGTCCGTCGTCAATGCCGACGCCTCCAGCACCAACGACGACTCGTGCTCCGCACGCGCCGCCGTGACGACGTTCAACTTCGATATTCTCAAGGTCGGTGGAGGAGAAGAAGACGACGTCGCTGTGACGAAGGAGCTGTTTCCGGTGAACAGTTGGCCGGGGAAGGGGCAGGGGCTGCAGTACTCGCCGGCATCATCGTCGGCGAGGCACAACTTGATCGAGCTTGGTGGGCCCGGGGAGGTTCAGCAGAAACAGCCACAACCACCGCCACCGCCACCACAACAACCGCAGGTGAAGAAGAGCAGGAGGGGGCCCAGGTCTCGGAGTTCTCAGTACAGAGGGGTCACTTTCTATAGAAGAACTGGTAGATGGGAATCGCATATTTGGGATTGTGGCAAACAAGTGTATTTGGGTGGATTTGACACTGCTCATGCTGCTGCTAGAGCCTACGATCGAGCTGCGATTAAGTTCAGGGGAGTTGATGCTGATATCAATTACAATCTCAGTGATTATGAGGAGGATATGAAACAGATGAAGAATTTGACCAAGGAAGAATTCGTGCACATACTACGTCGGCAGAGCACTGGTTTCTCGAGGGGGAGCTCAAGATATAGAGGGGTTACACTGCACAAATGTGGTCGTTGGGAAGCTCGAATGGGGCAATTCCTCGGCAAAAAGTATATATATCTTGGGCTATTCGACAGTGAAGTAGAAGCTGCAAGGGCTTATGACAAGGCAGCTATCAAATGTAATGGAAGGGAAGCTGTCACCAACTTTGAGGCAAGTACTTACGAAGGGGAGATGATATCTGACGCTGTTAATGAAGATGGCAATCACAATCTTGATCTGAATTTGGGAATATCTCCTCCTTCATTTGGTAATGGTCAGAAGCAAGGCGAGGGGCATCTTCAGTTCCATTCTGGCCCTTATGAGGGGCAAAATGGAAAGAATATGAGGGTAACTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AP2

Protein Analysis

362

Amino Acids

39.71

Weight (kDa)

6.27

Isoelectric Point (pI)

51.66

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AP2	PF00847	152 - 200	4.1e-10	AP2 domain
AP2	PF00847	243 - 293	6.9e-09	AP2 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003382)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G28550 AT2G28550 AT2G28550 AT2G28550 AT2G28550 AT2G28550 AT5G67180 AT5G67180 AT5G67180
fragaria_vesca	FvH4_3g33940 FvH4_3g33940 FvH4_3g33940 FvH4_3g33940 FvH4_3g33940 FvH4_3g33940 FvH4_3g33940
malus_domestica	MD03G1107900.v1.1 MD11G1121200.v1.1
prunus_persica	Prupe.6G091100_v2.0.a1 Prupe.6G091100_v2.0.a1 Prupe.6G091100_v2.0.a1
pyrus_communis	pycom03g08790 pycom11g10230
rosa_chinensis	RchiOBHm_Chr5g0061491 RchiOBHm_Chr5g0061501
rosa_laevigata	RLG00000035482
rosa_multiflora	Rmu_sc0006126.1_g000010
rosa_roxburghii	Rroxscaffold_1G00019170
rosa_rugosa	Rorug05G0341000 Rorug05G0341100 Rorug05G0341200
rosa_samantha	Rh5AG403200 Rh5BG415600 Rh5CG440300 Rh5DG430100
rosa_wichuraiana	Rw5G037920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	403
AasI	GACNNNNNNGTC	1 cut(s)	56
AatII	GACGTC	3 cut(s)	54, 119, 243
Acc36I	ACCTGC	1 cut(s)	403
AccII	CGCG	2 cut(s)	92, 180
AccIII	TCCGGA	1 cut(s)	73
AciI	CCGC	5 cut(s)	174, 183, 389, 395, 410
AclWI	GGATC	2 cut(s)	15, 37
AcoI	YGGCCR	1 cut(s)	278
AcsI	RAATTY	3 cut(s)	661, 677, 973
AcuI	CTGAAG	1 cut(s)	1016
AcyI	GRCGYC	4 cut(s)	51, 116, 144, 240
AfaI	GTAC	3 cut(s)	305, 458, 910
AfiI	CCNNNNNNNGG	5 cut(s)	287, 444, 998, 1054, 1055
AgsI	TTSAA	1 cut(s)	199
AjnI	CCWGG	1 cut(s)	437
AjuI	GAANNNNNNNTTGG	2 cut(s)	662, 694
AleI	CACNNNNGTG	1 cut(s)	756
AluBI	AGCT	8 cut(s)	259, 346, 581, 726, 773, 839, 863, 887
AluI	AGCT	8 cut(s)	259, 346, 581, 726, 773, 839, 863, 887
Alw21I	GWGCWC	4 cut(s)	173, 687, 707, 728
Alw26I	GTCTC	1 cut(s)	447
Alw44I	GTGCAC	1 cut(s)	683
AlwI	GGATC	2 cut(s)	15, 37
AlwNI	CAGNNNCTG	1 cut(s)	298
Ama87I	CYCGRG	2 cut(s)	356, 715
Aor13HI	TCCGGA	1 cut(s)	73
AoxI	GGCC	4 cut(s)	278, 353, 434, 1045
ApaI	GGGCCC	2 cut(s)	357, 438
ApaLI	GTGCAC	1 cut(s)	683
ApeKI	GCWGC	7 cut(s)	87, 298, 557, 560, 581, 839, 860
ApoI	RAATTY	3 cut(s)	661, 677, 973
AspLEI	GCGC	2 cut(s)	92, 182
AspS9I	GGNCC	5 cut(s)	353, 354, 434, 435, 1046
AsuC2I	CCSGG	4 cut(s)	112, 282, 357, 358
AsuHPI	GGTGA	3 cut(s)	280, 427, 883
AvaI	CYCGRG	2 cut(s)	356, 715
BaeGI	GKGCMC	3 cut(s)	357, 438, 687
BanII	GRGCYC	3 cut(s)	357, 438, 728
BauI	CACGAG	1 cut(s)	166
BbsI	GAAGAC	2 cut(s)	46, 240
Bbv12I	GWGCWC	4 cut(s)	173, 687, 707, 728
BbvI	GCAGC	7 cut(s)	99, 285, 544, 547, 568, 826, 872
BccI	CCATC	2 cut(s)	486, 944
BceAI	ACGGC	1 cut(s)	170
BcgI	CGANNNNNNTGC	4 cut(s)	303, 337, 563, 597
BciT130I	CCWGG	1 cut(s)	439
BcnI	CCSGG	4 cut(s)	112, 282, 357, 358
BcoDI	GTCTC	1 cut(s)	447
BfaI	CTAG	1 cut(s)	564
BfmI	CTRYAG	2 cut(s)	299, 475
BfuAI	ACCTGC	1 cut(s)	403
BisI	GCNGC	8 cut(s)	88, 183, 299, 558, 561, 582, 840, 861
BlsI	GCNGC	8 cut(s)	89, 184, 300, 559, 562, 583, 841, 862
BmcAI	AGTACT	2 cut(s)	305, 910
Bme1390I	CCNGG	5 cut(s)	112, 282, 357, 358, 439
BmeT110I	CYCGRG	2 cut(s)	356, 715
BmgT120I	GGNCC	5 cut(s)	353, 354, 434, 435, 1046
BmiI	GGNNCC	4 cut(s)	82, 355, 435, 436
BmrFI	CCNGG	5 cut(s)	112, 282, 357, 358, 439
BmsI	GCATC	3 cut(s)	323, 595, 1036
BpiI	GAAGAC	2 cut(s)	46, 240
BpmI	CTGGAG	1 cut(s)	133
BpuEI	CTTGAG	2 cut(s)	197, 712
BpuMI	CCSGG	4 cut(s)	112, 282, 357, 358
BsaBI	GATNNNNATC	3 cut(s)	12, 496, 954
BsaHI	GRCGYC	4 cut(s)	51, 116, 144, 240
BsaI	GGTCTC	1 cut(s)	447
BsaJI	CCNNGG	6 cut(s)	281, 356, 357, 437, 669, 790
BsaWI	WCCGGW	2 cut(s)	73, 265
BsaXI	ACNNNNNCTCC	2 cut(s)	155, 185
Bsc4I	CCNNNNNNNGG	5 cut(s)	287, 444, 998, 1054, 1055
Bse118I	RCCGGY	1 cut(s)	310
Bse1I	ACTGG	2 cut(s)	490, 712
Bse8I	GATNNNNATC	3 cut(s)	12, 496, 954
BseAI	TCCGGA	1 cut(s)	73
BseBI	CCWGG	1 cut(s)	439
BseDI	CCNNGG	6 cut(s)	281, 356, 357, 437, 669, 790
BseJI	GATNNNNATC	3 cut(s)	12, 496, 954
BseLI	CCNNNNNNNGG	5 cut(s)	287, 444, 998, 1054, 1055
BseMII	CTCAG	3 cut(s)	31, 467, 640
BseNI	ACTGG	2 cut(s)	490, 712
BseRI	GAGGAG	3 cut(s)	240, 653, 978
BseSI	GKGCMC	3 cut(s)	357, 438, 687
BseXI	GCAGC	7 cut(s)	99, 285, 544, 547, 568, 826, 872
BseYI	CCCAGC	1 cut(s)	25
BsgI	GTGCAG	1 cut(s)	734
Bsh1236I	CGCG	2 cut(s)	92, 180
Bsh1285I	CGRYCG	1 cut(s)	577
BshFI	GGCC	4 cut(s)	280, 355, 436, 1047
BsiEI	CGRYCG	1 cut(s)	577
BsiHKAI	GWGCWC	4 cut(s)	173, 687, 707, 728
BsiHKCI	CYCGRG	2 cut(s)	356, 715
BsiSI	CCGG	7 cut(s)	74, 84, 111, 266, 281, 311, 357
BslFI	GGGAC	1 cut(s)	127
BslI	CCNNNNNNNGG	5 cut(s)	287, 444, 998, 1054, 1055
BsmAI	GTCTC	1 cut(s)	447
BsmFI	GGGAC	1 cut(s)	127
BsnI	GGCC	4 cut(s)	280, 355, 436, 1047
Bso31I	GGTCTC	1 cut(s)	447
BsoBI	CYCGRG	2 cut(s)	356, 715
Bsp120I	GGGCCC	2 cut(s)	353, 434
Bsp1286I	GDGCHC	6 cut(s)	173, 357, 438, 687, 707, 728
Bsp13I	TCCGGA	1 cut(s)	73
Bsp143I	GATC	5 cut(s)	7, 29, 339, 574, 967
BspACI	CCGC	5 cut(s)	174, 183, 389, 395, 410
BspANI	GGCC	4 cut(s)	280, 355, 436, 1047
BspCNI	CTCAG	3 cut(s)	30, 466, 639
BspEI	TCCGGA	1 cut(s)	73
BspFNI	CGCG	2 cut(s)	92, 180
BspLI	GGNNCC	4 cut(s)	82, 355, 435, 436
BspMAI	CTGCAG	1 cut(s)	303
BspMI	ACCTGC	1 cut(s)	403
BspPI	GGATC	2 cut(s)	15, 37
BspQI	GCTCTTC	1 cut(s)	416
BspTNI	GGTCTC	1 cut(s)	447
BsrFI	RCCGGY	1 cut(s)	310
BsrI	ACTGG	2 cut(s)	490, 712
BssAI	RCCGGY	1 cut(s)	310
BssECI	CCNNGG	6 cut(s)	281, 356, 357, 437, 669, 790
BssMI	GATC	5 cut(s)	7, 29, 339, 574, 967
BssNI	GRCGYC	4 cut(s)	51, 116, 144, 240
BssSI	CACGAG	1 cut(s)	166
BssT1I	CCWWGG	1 cut(s)	669
Bst2BI	CACGAG	1 cut(s)	166
Bst2UI	CCWGG	1 cut(s)	439
Bst4CI	ACNGT	2 cut(s)	275, 827
Bst6I	CTCTTC	1 cut(s)	416
BstACI	GRCGYC	4 cut(s)	51, 116, 144, 240
BstAPI	GCANNNNNTGC	1 cut(s)	298
BstC8I	GCNNGC	3 cut(s)	23, 178, 312
BstDEI	CTNAG	3 cut(s)	17, 453, 626
BstFNI	CGCG	2 cut(s)	92, 180
BstHHI	GCGC	2 cut(s)	92, 182
BstKTI	GATC	5 cut(s)	10, 32, 342, 577, 970
BstMAI	GTCTC	1 cut(s)	447
BstMBI	GATC	5 cut(s)	7, 29, 339, 574, 967
BstMCI	CGRYCG	1 cut(s)	577
BstNI	CCWGG	1 cut(s)	439
BstSCI	CCNGG	5 cut(s)	110, 280, 355, 356, 437
BstSFI	CTRYAG	2 cut(s)	299, 475
BstSLI	GKGCMC	3 cut(s)	357, 438, 687
BstUI	CGCG	2 cut(s)	92, 180
BstV1I	GCAGC	7 cut(s)	99, 285, 544, 547, 568, 826, 872
BstV2I	GAAGAC	2 cut(s)	46, 240
BstX2I	RGATCY	1 cut(s)	7
BstYI	RGATCY	1 cut(s)	7
BsuRI	GGCC	4 cut(s)	280, 355, 436, 1047
BtsI	GCAGTG	2 cut(s)	546, 746
BtsIMutI	CAGTG	5 cut(s)	546, 634, 705, 746, 832
BveI	ACCTGC	1 cut(s)	403
Cac8I	GCNNGC	3 cut(s)	23, 178, 312
CaiI	CAGNNNCTG	1 cut(s)	298
CfoI	GCGC	2 cut(s)	92, 182
Cfr10I	RCCGGY	1 cut(s)	310
Cfr13I	GGNCC	5 cut(s)	353, 354, 434, 435, 1046
Cfr9I	CCCGGG	1 cut(s)	356
CseI	GACGC	3 cut(s)	103, 152, 944
Csp6I	GTAC	3 cut(s)	304, 457, 909
CspCI	CAANNNNNGTGG	2 cut(s)	202, 237
CviAII	CATG	1 cut(s)	554
CviQI	GTAC	3 cut(s)	304, 457, 909
DdeI	CTNAG	3 cut(s)	17, 453, 626
DpnI	GATC	5 cut(s)	9, 31, 341, 576, 969
DpnII	GATC	5 cut(s)	7, 29, 339, 574, 967
DrdI	GACNNNNNNGTC	1 cut(s)	56
DseDI	GACNNNNNNGTC	1 cut(s)	56
EaeI	YGGCCR	1 cut(s)	278
Eam1104I	CTCTTC	1 cut(s)	416
EarI	CTCTTC	1 cut(s)	416
Ecl136II	GAGCTC	1 cut(s)	726
Eco130I	CCWWGG	1 cut(s)	669
Eco24I	GRGCYC	3 cut(s)	357, 438, 728
Eco31I	GGTCTC	1 cut(s)	447
Eco32I	GATATC	2 cut(s)	613, 930
Eco53kI	GAGCTC	1 cut(s)	726
Eco57I	CTGAAG	1 cut(s)	1016
Eco88I	CYCGRG	2 cut(s)	356, 715
EcoICRI	GAGCTC	1 cut(s)	726
EcoO109I	RGGNCCY	1 cut(s)	434
EcoRI	GAATTC	1 cut(s)	677
EcoRII	CCWGG	1 cut(s)	437
EcoRV	GATATC	2 cut(s)	613, 930
EcoT14I	CCWWGG	1 cut(s)	669
EcoT38I	GRGCYC	3 cut(s)	357, 438, 728
ErhI	CCWWGG	1 cut(s)	669
FaeI	CATG	1 cut(s)	557
FaqI	GGGAC	1 cut(s)	127
FatI	CATG	1 cut(s)	553
Fnu4HI	GCNGC	8 cut(s)	88, 183, 299, 558, 561, 582, 840, 861
FriOI	GRGCYC	3 cut(s)	357, 438, 728
Fsp4HI	GCNGC	8 cut(s)	88, 183, 299, 558, 561, 582, 840, 861
FspBI	CTAG	1 cut(s)	564
GlaI	GCGC	2 cut(s)	91, 181
GluI	GCNGC	8 cut(s)	88, 183, 299, 558, 561, 582, 840, 861
GsaI	CCCAGC	1 cut(s)	29
GsuI	CTGGAG	1 cut(s)	133
HaeIII	GGCC	4 cut(s)	280, 355, 436, 1047
HapII	CCGG	7 cut(s)	74, 84, 111, 266, 281, 311, 357
HgaI	GACGC	3 cut(s)	103, 152, 944
HhaI	GCGC	2 cut(s)	92, 182
Hin1I	GRCGYC	4 cut(s)	51, 116, 144, 240
Hin1II	CATG	1 cut(s)	557
Hin6I	GCGC	2 cut(s)	90, 180
HinP1I	GCGC	2 cut(s)	90, 180
HinfI	GANTC	3 cut(s)	107, 164, 497
HpaII	CCGG	7 cut(s)	74, 84, 111, 266, 281, 311, 357
HphI	GGTGA	3 cut(s)	280, 427, 883
Hpy166II	GTNNAC	2 cut(s)	271, 685
Hpy188I	TCNGA	5 cut(s)	40, 447, 934, 972, 1011
Hpy188III	TCNNGA	4 cut(s)	74, 715, 729, 965
Hpy8I	GTNNAC	2 cut(s)	271, 685
HpyAV	CCTTC	6 cut(s)	71, 247, 280, 873, 911, 1002
HpyCH4III	ACNGT	2 cut(s)	275, 827
HpyCH4IV	ACGT	5 cut(s)	51, 116, 194, 240, 694
HpyCH4V	TGCA	4 cut(s)	301, 685, 751, 842
HpyF3I	CTNAG	3 cut(s)	17, 453, 626
HpySE526I	ACGT	5 cut(s)	51, 116, 194, 240, 694
Hsp92I	GRCGYC	4 cut(s)	51, 116, 144, 240
Hsp92II	CATG	1 cut(s)	557
HspAI	GCGC	2 cut(s)	90, 180
Kpn2I	TCCGGA	1 cut(s)	73
KroI	GCCGGC	1 cut(s)	310
KroNI	GCCGGC	1 cut(s)	312
Kzo9I	GATC	5 cut(s)	7, 29, 339, 574, 967
LguI	GCTCTTC	1 cut(s)	416
LmnI	GCTCC	4 cut(s)	86, 176, 256, 723
Lsp1109I	GCAGC	7 cut(s)	99, 285, 544, 547, 568, 826, 872
LweI	GCATC	3 cut(s)	323, 595, 1036
MaeI	CTAG	1 cut(s)	564
MaeII	ACGT	5 cut(s)	51, 116, 194, 240, 694
MaeIII	GTNAC	6 cut(s)	187, 247, 466, 742, 889, 1081
MalI	GATC	5 cut(s)	9, 31, 341, 576, 969
MboI	GATC	5 cut(s)	7, 29, 339, 574, 967
MflI	RGATCY	1 cut(s)	7
MhlI	GDGCHC	6 cut(s)	173, 357, 438, 687, 707, 728
MluCI	AATT	5 cut(s)	616, 661, 677, 785, 973
MlyI	GAGTC	2 cut(s)	116, 158
MmeI	TCCRAC	2 cut(s)	18, 144
MroI	TCCGGA	1 cut(s)	73
MroNI	GCCGGC	1 cut(s)	310
MseI	TTAA	4 cut(s)	12, 588, 942, 1087
MslI	CAYNNNNRTG	1 cut(s)	756
MspI	CCGG	7 cut(s)	74, 84, 111, 266, 281, 311, 357
MspR9I	CCNGG	5 cut(s)	112, 282, 357, 358, 439
MvaI	CCWGG	1 cut(s)	439
MvnI	CGCG	2 cut(s)	92, 180
NaeI	GCCGGC	1 cut(s)	312
NciI	CCSGG	4 cut(s)	112, 282, 357, 358
NdeII	GATC	5 cut(s)	7, 29, 339, 574, 967
NgoMIV	GCCGGC	1 cut(s)	310
NlaIII	CATG	1 cut(s)	557
NlaIV	GGNNCC	4 cut(s)	82, 355, 435, 436
NmeAIII	GCCGAG	1 cut(s)	771
NmuCI	GTSAC	4 cut(s)	187, 247, 466, 889
OliI	CACNNNNGTG	1 cut(s)	756
PaeR7I	CTCGAG	1 cut(s)	715
PaqCI	CACCTGC	1 cut(s)	403
PciSI	GCTCTTC	1 cut(s)	416
PcsI	WCGNNNNNNNCGW	4 cut(s)	54, 57, 122, 138
PdiI	GCCGGC	1 cut(s)	312
PfeI	GAWTC	1 cut(s)	497
PflFI	GACNNNGTC	1 cut(s)	239
PfoI	TCCNGGA	1 cut(s)	110
PkrI	GCNGC	8 cut(s)	89, 184, 300, 559, 562, 583, 841, 862
Ple19I	CGATCG	1 cut(s)	577
PleI	GAGTC	2 cut(s)	115, 158
PpsI	GAGTC	2 cut(s)	115, 158
Psp124BI	GAGCTC	1 cut(s)	728
Psp6I	CCWGG	1 cut(s)	437
PspFI	CCCAGC	1 cut(s)	25
PspGI	CCWGG	1 cut(s)	437
PspN4I	GGNNCC	4 cut(s)	82, 355, 435, 436
PspOMI	GGGCCC	2 cut(s)	353, 434
PspPI	GGNCC	5 cut(s)	353, 354, 434, 435, 1046
PstI	CTGCAG	1 cut(s)	303
PstNI	CAGNNNCTG	1 cut(s)	298
PsuI	RGATCY	1 cut(s)	7
PsyI	GACNNNGTC	1 cut(s)	239
PvuI	CGATCG	1 cut(s)	577
RsaI	GTAC	3 cut(s)	305, 458, 910
RsaNI	GTAC	3 cut(s)	304, 457, 909
RseI	CAYNNNNRTG	1 cut(s)	756
SacI	GAGCTC	1 cut(s)	728
SapI	GCTCTTC	1 cut(s)	416
SaqAI	TTAA	4 cut(s)	12, 588, 942, 1087
SatI	GCNGC	8 cut(s)	88, 183, 299, 558, 561, 582, 840, 861
Sau3AI	GATC	5 cut(s)	7, 29, 339, 574, 967
Sau96I	GGNCC	5 cut(s)	353, 354, 434, 435, 1046
ScaI	AGTACT	2 cut(s)	305, 910
SchI	GAGTC	2 cut(s)	116, 158
ScrFI	CCNGG	5 cut(s)	112, 282, 357, 358, 439
SduI	GDGCHC	6 cut(s)	173, 357, 438, 687, 707, 728
SfaNI	GCATC	3 cut(s)	323, 595, 1036
SfcI	CTRYAG	2 cut(s)	299, 475
Sfr274I	CTCGAG	1 cut(s)	715
SlaI	CTCGAG	1 cut(s)	715
SmaI	CCCGGG	1 cut(s)	358
SmiMI	CAYNNNNRTG	1 cut(s)	756
SmlI	CTYRAG	3 cut(s)	212, 715, 727
SmoI	CTYRAG	3 cut(s)	212, 715, 727
Sse9I	AATT	5 cut(s)	616, 661, 677, 785, 973
SsiI	CCGC	5 cut(s)	174, 183, 389, 395, 410
SspMI	CTAG	1 cut(s)	564
SstI	GAGCTC	1 cut(s)	728
StyD4I	CCNGG	5 cut(s)	110, 280, 355, 356, 437
StyI	CCWWGG	1 cut(s)	669
TaaI	ACNGT	2 cut(s)	275, 827
TaiI	ACGT	5 cut(s)	54, 119, 197, 243, 697
TaqI	TCGA	6 cut(s)	204, 342, 577, 716, 775, 822
TasI	AATT	5 cut(s)	616, 661, 677, 785, 973
TatI	WGTACW	3 cut(s)	303, 456, 908
TauI	GCSGC	1 cut(s)	185
TfiI	GAWTC	1 cut(s)	497
Tru1I	TTAA	4 cut(s)	12, 588, 942, 1087
Tru9I	TTAA	4 cut(s)	12, 588, 942, 1087
TscAI	CASTG	5 cut(s)	553, 634, 712, 753, 832
TseFI	GTSAC	4 cut(s)	187, 247, 466, 889
TseI	GCWGC	7 cut(s)	87, 298, 557, 560, 581, 839, 860
Tsp45I	GTSAC	4 cut(s)	187, 247, 466, 889
TspDTI	ATGAA	4 cut(s)	662, 671, 960, 984
TspGWI	ACGGA	1 cut(s)	118
TspMI	CCCGGG	1 cut(s)	356
TspRI	CASTG	5 cut(s)	553, 634, 712, 753, 832
Tth111I	GACNNNGTC	1 cut(s)	239
VneI	GTGCAC	1 cut(s)	683
XapI	RAATTY	3 cut(s)	661, 677, 973
XhoI	CTCGAG	1 cut(s)	715
XmaI	CCCGGG	1 cut(s)	356
XspI	CTAG	1 cut(s)	564
ZraI	GACGTC	3 cut(s)	52, 117, 241
ZrmI	AGTACT	2 cut(s)	305, 910

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.