Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5B

Orthogroup ID

OG0003382

Physical Location & Seq

Genomic Coordinates Reverse (-)

67363887 .. 67368444

Gene Structure 4558 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5BG415600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1434 bp

ATGTTGGATCTTAATCTCAGCGTGCTGGGATCGTCGTCGGAACAAAACGACGTCTTCGTCGTCGGCTCGTTTCCGGAAGGCTCCGGCAGCGCGACGCAAATGGACGAGTCCGGGACGTCCAACTCGTCCGTCGTCAATGCCGACGCCTCCAGCACCAACGACGACTCGTGCTCCGCACGCGCCGCCGTGACGACGTTCAACTTCGATATTCTCAAGGTCGGTGGAGGAGAAGAAGACGACGTCGCTGTGACGAAGGAGCTGTTTCCGGTGAACAGTTGGCCGGGGAAGGGGCAGGGGCAGCAGTACTCGCCGGCATCATCGTCGGCGAGGCACAACTTGATCGAGCTTGGTGGGCCCGCGGAGGTTCAGCAGAAACAGCCACAACCACCGCCACCGCCACCACAACAACCGCAGGTGAAGAAGAGCAGGAGGGGGCCCAGGTCTCGGAGTTCTCAGTACAGAGGGGTCACTTTCTATAGAAGAACTGGTAGATGGGAATCGCATATTTGGGATTGTGGCAAACAAGTGTATTTGGGTGGATTTGACACTGCTCATGCTGCTGCTAGAGCCTACGATCGAGCTGCGATTAAGTTCAGGGGAGTTGATGCTGATATCAATTACAATCTCAGTGATTATGAGGAGGATATGAAACAGATGAAGAATTTGACCAAGGAAGAATTCGTGCACATACTACGTCGGCAGAGCACTGGTTTCTCGAGGGGGAGCTCAAGATATAGAGGGGTTACACTGCACAAATGTGGTCGTTGGGAAGCTCGAATGGGGCAATTCCTCGGCAAAAAGTATATATATCTTGGGCTATTCGACAGTGAAGTAGAAGCTGCAAGGGCTTATGACAAGGCAGCTATCAAATGTAATGGAAGGGAAGCTGTCACCAACTTTGAGGCAAGTACTTACGAAGGGGAGATGATATCTGACGCTGTTAATGAAGATGGCAATCACAATCTTGATCTGAATTTGGGAATATCTCCTCCTTCATTTGGTAATGGTCAGAAGCAAGGCGAGGGGCATCTTCAGTTCCATTCTGGCCCTTATGAGGGGCAAAATGGAAAGAATATGAGGATGGTGCCCAATGCAAATGCAACAATGACTGCTCCACCTTTCAGAGGCGTAATAATGACATCAGAGCACCCTCCTTTATGGAATGGTGTATATCCTAGTTTCCTTCCGAATCAGGAAAGAGCAATAGAGAAGAGAATTGCATTAGGATCTCAAGGACCTCCCAATTGGGCTTGGCAAATGCATGGCCAGGTCAGTGCCCCAATGCCACTGTTCTCTACTGCAGCATCATCAGGATTCTCATTTACAGCTACCACTCCGTCCGCTGCTGTCCTCCCCATAATCCCCTCAAACCCAACCGCCCTCAATCTCTGTTTTACATCTTCAGCCACGGCCGCCCACCATACGTCTCAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AP2

Protein Analysis

477

Amino Acids

51.91

Weight (kDa)

6.65

Isoelectric Point (pI)

51.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AP2	PF00847	152 - 200	6.1e-10	AP2 domain
AP2	PF00847	243 - 293	1e-08	AP2 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003382)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G28550 AT2G28550 AT2G28550 AT2G28550 AT2G28550 AT2G28550 AT5G67180 AT5G67180 AT5G67180
fragaria_vesca	FvH4_3g33940 FvH4_3g33940 FvH4_3g33940 FvH4_3g33940 FvH4_3g33940 FvH4_3g33940 FvH4_3g33940
malus_domestica	MD03G1107900.v1.1 MD11G1121200.v1.1
prunus_persica	Prupe.6G091100_v2.0.a1 Prupe.6G091100_v2.0.a1 Prupe.6G091100_v2.0.a1
pyrus_communis	pycom03g08790 pycom11g10230
rosa_chinensis	RchiOBHm_Chr5g0061491 RchiOBHm_Chr5g0061501
rosa_laevigata	RLG00000035482
rosa_multiflora	Rmu_sc0006126.1_g000010
rosa_roxburghii	Rroxscaffold_1G00019170
rosa_rugosa	Rorug05G0341000 Rorug05G0341100 Rorug05G0341200
rosa_samantha	Rh5AG403200 Rh5BG415600 Rh5CG440300 Rh5DG430100
rosa_wichuraiana	Rw5G037920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	403
AasI	GACNNNNNNGTC	1 cut(s)	56
AatII	GACGTC	3 cut(s)	54, 119, 243
Acc36I	ACCTGC	1 cut(s)	403
AccB1I	GGYRCC	1 cut(s)	1084
AccII	CGCG	3 cut(s)	92, 180, 359
AccIII	TCCGGA	1 cut(s)	73
AclWI	GGATC	3 cut(s)	15, 37, 1234
AcoI	YGGCCR	3 cut(s)	278, 1264, 1410
AcsI	RAATTY	3 cut(s)	661, 677, 973
AcuI	CTGAAG	2 cut(s)	1016, 1386
AcyI	GRCGYC	4 cut(s)	51, 116, 144, 240
AfaI	GTAC	3 cut(s)	305, 458, 910
AfiI	CCNNNNNNNGG	6 cut(s)	287, 444, 998, 1054, 1055, 1124
AgsI	TTSAA	1 cut(s)	199
AjnI	CCWGG	2 cut(s)	437, 1266
AjuI	GAANNNNNNNTTGG	2 cut(s)	662, 694
AleI	CACNNNNGTG	1 cut(s)	756
AluBI	AGCT	9 cut(s)	259, 346, 581, 726, 773, 839, 863, 887, 1328
AluI	AGCT	9 cut(s)	259, 346, 581, 726, 773, 839, 863, 887, 1328
Alw21I	GWGCWC	5 cut(s)	173, 687, 707, 728, 1149
Alw26I	GTCTC	1 cut(s)	447
Alw44I	GTGCAC	1 cut(s)	683
AlwI	GGATC	3 cut(s)	15, 37, 1234
Ama87I	CYCGRG	1 cut(s)	715
Aor13HI	TCCGGA	1 cut(s)	73
AoxI	GGCC	6 cut(s)	278, 353, 434, 1045, 1264, 1410
ApaI	GGGCCC	2 cut(s)	357, 438
ApaLI	GTGCAC	1 cut(s)	683
ApeKI	GCWGC	9 cut(s)	87, 298, 557, 560, 581, 839, 860, 1301, 1343
ApoI	RAATTY	3 cut(s)	661, 677, 973
AspLEI	GCGC	2 cut(s)	92, 182
AspS9I	GGNCC	6 cut(s)	353, 354, 434, 435, 1046, 1235
AsuC2I	CCSGG	2 cut(s)	112, 282
AsuHPI	GGTGA	3 cut(s)	280, 427, 883
AvaI	CYCGRG	1 cut(s)	715
AvaII	GGWCC	1 cut(s)	1235
BaeGI	GKGCMC	5 cut(s)	357, 438, 687, 1089, 1279
BalI	TGGCCA	1 cut(s)	1266
BanI	GGYRCC	1 cut(s)	1084
BanII	GRGCYC	3 cut(s)	357, 438, 728
BauI	CACGAG	1 cut(s)	166
BbsI	GAAGAC	2 cut(s)	46, 240
Bbv12I	GWGCWC	5 cut(s)	173, 687, 707, 728, 1149
BbvI	GCAGC	9 cut(s)	99, 310, 544, 547, 568, 826, 872, 1313, 1330
BccI	CCATC	3 cut(s)	486, 944, 1075
BceAI	ACGGC	2 cut(s)	170, 1425
BcgI	CGANNNNNNTGC	4 cut(s)	303, 337, 563, 597
BciT130I	CCWGG	2 cut(s)	439, 1268
BcnI	CCSGG	2 cut(s)	112, 282
BcoDI	GTCTC	1 cut(s)	447
BfaI	CTAG	2 cut(s)	564, 1176
BfmI	CTRYAG	2 cut(s)	475, 1299
BfuAI	ACCTGC	1 cut(s)	403
BmcAI	AGTACT	2 cut(s)	305, 910
Bme1390I	CCNGG	4 cut(s)	112, 282, 439, 1268
Bme18I	GGWCC	1 cut(s)	1235
BmeT110I	CYCGRG	1 cut(s)	715
BmgT120I	GGNCC	6 cut(s)	353, 354, 434, 435, 1046, 1235
BmiI	GGNNCC	5 cut(s)	82, 355, 435, 436, 1086
BmrFI	CCNGG	4 cut(s)	112, 282, 439, 1268
BmsI	GCATC	4 cut(s)	323, 595, 1036, 1313
BpiI	GAAGAC	2 cut(s)	46, 240
BpmI	CTGGAG	1 cut(s)	133
BpuEI	CTTGAG	3 cut(s)	197, 712, 1215
BpuMI	CCSGG	2 cut(s)	112, 282
BsaBI	GATNNNNATC	3 cut(s)	12, 496, 954
BsaHI	GRCGYC	4 cut(s)	51, 116, 144, 240
BsaI	GGTCTC	1 cut(s)	447
BsaJI	CCNNGG	6 cut(s)	281, 357, 437, 669, 790, 1407
BsaWI	WCCGGW	2 cut(s)	73, 265
BsaXI	ACNNNNNCTCC	2 cut(s)	155, 185
Bsc4I	CCNNNNNNNGG	6 cut(s)	287, 444, 998, 1054, 1055, 1124
Bse118I	RCCGGY	1 cut(s)	310
Bse1I	ACTGG	2 cut(s)	490, 712
Bse8I	GATNNNNATC	3 cut(s)	12, 496, 954
BseAI	TCCGGA	1 cut(s)	73
BseBI	CCWGG	2 cut(s)	439, 1268
BseDI	CCNNGG	6 cut(s)	281, 357, 437, 669, 790, 1407
BseGI	GGATG	1 cut(s)	1086
BseJI	GATNNNNATC	3 cut(s)	12, 496, 954
BseLI	CCNNNNNNNGG	6 cut(s)	287, 444, 998, 1054, 1055, 1124
BseMII	CTCAG	3 cut(s)	31, 467, 640
BseNI	ACTGG	2 cut(s)	490, 712
BseRI	GAGGAG	3 cut(s)	240, 653, 978
BseSI	GKGCMC	5 cut(s)	357, 438, 687, 1089, 1279
BseX3I	CGGCCG	1 cut(s)	1410
BseXI	GCAGC	9 cut(s)	99, 310, 544, 547, 568, 826, 872, 1313, 1330
BseYI	CCCAGC	1 cut(s)	25
BsgI	GTGCAG	1 cut(s)	734
Bsh1236I	CGCG	3 cut(s)	92, 180, 359
Bsh1285I	CGRYCG	2 cut(s)	577, 1413
BshFI	GGCC	6 cut(s)	280, 355, 436, 1047, 1266, 1412
BshNI	GGYRCC	1 cut(s)	1084
BsiEI	CGRYCG	2 cut(s)	577, 1413
BsiHKAI	GWGCWC	5 cut(s)	173, 687, 707, 728, 1149
BsiHKCI	CYCGRG	1 cut(s)	715
BsiSI	CCGG	6 cut(s)	74, 84, 111, 266, 281, 311
BslFI	GGGAC	1 cut(s)	127
BslI	CCNNNNNNNGG	6 cut(s)	287, 444, 998, 1054, 1055, 1124
BsmAI	GTCTC	1 cut(s)	447
BsmFI	GGGAC	1 cut(s)	127
BsnI	GGCC	6 cut(s)	280, 355, 436, 1047, 1266, 1412
Bso31I	GGTCTC	1 cut(s)	447
BsoBI	CYCGRG	1 cut(s)	715
Bsp120I	GGGCCC	2 cut(s)	353, 434
Bsp1286I	GDGCHC	9 cut(s)	173, 357, 438, 687, 707, 728, 1089, 1149, 1279
Bsp13I	TCCGGA	1 cut(s)	73
Bsp143I	GATC	6 cut(s)	7, 29, 339, 574, 967, 1226
BspANI	GGCC	6 cut(s)	280, 355, 436, 1047, 1266, 1412
BspCNI	CTCAG	3 cut(s)	30, 466, 639
BspEI	TCCGGA	1 cut(s)	73
BspFNI	CGCG	3 cut(s)	92, 180, 359
BspLI	GGNNCC	5 cut(s)	82, 355, 435, 436, 1086
BspMAI	CTGCAG	1 cut(s)	1303
BspMI	ACCTGC	1 cut(s)	403
BspPI	GGATC	3 cut(s)	15, 37, 1234
BspQI	GCTCTTC	1 cut(s)	416
BspT107I	GGYRCC	1 cut(s)	1084
BspTNI	GGTCTC	1 cut(s)	447
BsrFI	RCCGGY	1 cut(s)	310
BsrI	ACTGG	2 cut(s)	490, 712
BssAI	RCCGGY	1 cut(s)	310
BssECI	CCNNGG	6 cut(s)	281, 357, 437, 669, 790, 1407
BssMI	GATC	6 cut(s)	7, 29, 339, 574, 967, 1226
BssNI	GRCGYC	4 cut(s)	51, 116, 144, 240
BssSI	CACGAG	1 cut(s)	166
BssT1I	CCWWGG	1 cut(s)	669
Bst2BI	CACGAG	1 cut(s)	166
Bst2UI	CCWGG	2 cut(s)	439, 1268
Bst4CI	ACNGT	3 cut(s)	275, 827, 1290
Bst6I	CTCTTC	2 cut(s)	416, 1205
BstACI	GRCGYC	4 cut(s)	51, 116, 144, 240
BstC8I	GCNNGC	4 cut(s)	23, 178, 312, 357
BstDEI	CTNAG	3 cut(s)	17, 453, 626
BstDSI	CCRYGG	2 cut(s)	357, 1407
BstENI	CCTNNNNNAGG	1 cut(s)	1122
BstF5I	GGATG	1 cut(s)	1086
BstFNI	CGCG	3 cut(s)	92, 180, 359
BstHHI	GCGC	2 cut(s)	92, 182
BstKTI	GATC	6 cut(s)	10, 32, 342, 577, 970, 1229
BstMAI	GTCTC	1 cut(s)	447
BstMBI	GATC	6 cut(s)	7, 29, 339, 574, 967, 1226
BstMCI	CGRYCG	2 cut(s)	577, 1413
BstNI	CCWGG	2 cut(s)	439, 1268
BstSCI	CCNGG	4 cut(s)	110, 280, 437, 1266
BstSFI	CTRYAG	2 cut(s)	475, 1299
BstSLI	GKGCMC	5 cut(s)	357, 438, 687, 1089, 1279
BstUI	CGCG	3 cut(s)	92, 180, 359
BstV1I	GCAGC	9 cut(s)	99, 310, 544, 547, 568, 826, 872, 1313, 1330
BstV2I	GAAGAC	2 cut(s)	46, 240
BstX2I	RGATCY	2 cut(s)	7, 1226
BstYI	RGATCY	2 cut(s)	7, 1226
BstZI	CGGCCG	1 cut(s)	1410
BsuRI	GGCC	6 cut(s)	280, 355, 436, 1047, 1266, 1412
BtgI	CCRYGG	2 cut(s)	357, 1407
BtsCI	GGATG	1 cut(s)	1086
BtsI	GCAGTG	2 cut(s)	546, 746
BtsIMutI	CAGTG	7 cut(s)	546, 634, 705, 746, 832, 1279, 1286
BveI	ACCTGC	1 cut(s)	403
Cac8I	GCNNGC	4 cut(s)	23, 178, 312, 357
CfoI	GCGC	2 cut(s)	92, 182
Cfr10I	RCCGGY	1 cut(s)	310
Cfr13I	GGNCC	6 cut(s)	353, 354, 434, 435, 1046, 1235
Cfr42I	CCGCGG	1 cut(s)	360
CseI	GACGC	3 cut(s)	103, 152, 944
Csp6I	GTAC	3 cut(s)	304, 457, 909
CspCI	CAANNNNNGTGG	2 cut(s)	202, 237
CviAII	CATG	2 cut(s)	554, 1262
CviQI	GTAC	3 cut(s)	304, 457, 909
DdeI	CTNAG	3 cut(s)	17, 453, 626
DpnI	GATC	6 cut(s)	9, 31, 341, 576, 969, 1228
DpnII	GATC	6 cut(s)	7, 29, 339, 574, 967, 1226
DrdI	GACNNNNNNGTC	1 cut(s)	56
DseDI	GACNNNNNNGTC	1 cut(s)	56
EaeI	YGGCCR	3 cut(s)	278, 1264, 1410
EagI	CGGCCG	1 cut(s)	1410
Eam1104I	CTCTTC	2 cut(s)	416, 1205
EarI	CTCTTC	2 cut(s)	416, 1205
Ecl136II	GAGCTC	1 cut(s)	726
EclXI	CGGCCG	1 cut(s)	1410
Eco130I	CCWWGG	1 cut(s)	669
Eco24I	GRGCYC	3 cut(s)	357, 438, 728
Eco31I	GGTCTC	1 cut(s)	447
Eco32I	GATATC	2 cut(s)	613, 930
Eco47I	GGWCC	1 cut(s)	1235
Eco52I	CGGCCG	1 cut(s)	1410
Eco53kI	GAGCTC	1 cut(s)	726
Eco57I	CTGAAG	2 cut(s)	1016, 1386
Eco88I	CYCGRG	1 cut(s)	715
EcoICRI	GAGCTC	1 cut(s)	726
EcoNI	CCTNNNNNAGG	1 cut(s)	1122
EcoO109I	RGGNCCY	2 cut(s)	434, 1235
EcoRI	GAATTC	1 cut(s)	677
EcoRII	CCWGG	2 cut(s)	437, 1266
EcoRV	GATATC	2 cut(s)	613, 930
EcoT14I	CCWWGG	1 cut(s)	669
EcoT22I	ATGCAT	1 cut(s)	1263
EcoT38I	GRGCYC	3 cut(s)	357, 438, 728
ErhI	CCWWGG	1 cut(s)	669
FaeI	CATG	2 cut(s)	557, 1265
FaqI	GGGAC	1 cut(s)	127
FatI	CATG	2 cut(s)	553, 1261
FauI	CCCGC	1 cut(s)	364
FokI	GGATG	1 cut(s)	1093
FriOI	GRGCYC	3 cut(s)	357, 438, 728
FspBI	CTAG	2 cut(s)	564, 1176
GlaI	GCGC	2 cut(s)	91, 181
GsaI	CCCAGC	1 cut(s)	29
GsuI	CTGGAG	1 cut(s)	133
HaeIII	GGCC	6 cut(s)	280, 355, 436, 1047, 1266, 1412
HapII	CCGG	6 cut(s)	74, 84, 111, 266, 281, 311
HgaI	GACGC	3 cut(s)	103, 152, 944
HhaI	GCGC	2 cut(s)	92, 182
Hin1I	GRCGYC	4 cut(s)	51, 116, 144, 240
Hin1II	CATG	2 cut(s)	557, 1265
Hin6I	GCGC	2 cut(s)	90, 180
HinP1I	GCGC	2 cut(s)	90, 180
HinfI	GANTC	5 cut(s)	107, 164, 497, 1189, 1314
HpaII	CCGG	6 cut(s)	74, 84, 111, 266, 281, 311
HphI	GGTGA	3 cut(s)	280, 427, 883
Hpy166II	GTNNAC	2 cut(s)	271, 685
Hpy188I	TCNGA	8 cut(s)	40, 447, 934, 972, 1011, 1124, 1144, 1188
Hpy188III	TCNNGA	6 cut(s)	74, 715, 729, 965, 1193, 1311
Hpy8I	GTNNAC	2 cut(s)	271, 685
HpyAV	CCTTC	7 cut(s)	71, 247, 280, 873, 911, 1002, 1193
HpyCH4III	ACNGT	3 cut(s)	275, 827, 1290
HpyCH4IV	ACGT	6 cut(s)	51, 116, 194, 240, 694, 1424
HpyCH4V	TGCA	8 cut(s)	685, 751, 842, 1094, 1100, 1220, 1261, 1301
HpyF3I	CTNAG	3 cut(s)	17, 453, 626
HpySE526I	ACGT	6 cut(s)	51, 116, 194, 240, 694, 1424
Hsp92I	GRCGYC	4 cut(s)	51, 116, 144, 240
Hsp92II	CATG	2 cut(s)	557, 1265
HspAI	GCGC	2 cut(s)	90, 180
Kpn2I	TCCGGA	1 cut(s)	73
KroI	GCCGGC	1 cut(s)	310
KroNI	GCCGGC	1 cut(s)	312
KspI	CCGCGG	1 cut(s)	360
Kzo9I	GATC	6 cut(s)	7, 29, 339, 574, 967, 1226
LguI	GCTCTTC	1 cut(s)	416
LmnI	GCTCC	5 cut(s)	86, 176, 256, 723, 1117
Lsp1109I	GCAGC	9 cut(s)	99, 310, 544, 547, 568, 826, 872, 1313, 1330
LweI	GCATC	4 cut(s)	323, 595, 1036, 1313
MaeI	CTAG	2 cut(s)	564, 1176
MaeII	ACGT	6 cut(s)	51, 116, 194, 240, 694, 1424
MaeIII	GTNAC	5 cut(s)	187, 247, 466, 742, 889
MalI	GATC	6 cut(s)	9, 31, 341, 576, 969, 1228
MboI	GATC	6 cut(s)	7, 29, 339, 574, 967, 1226
MfeI	CAATTG	1 cut(s)	1243
MflI	RGATCY	2 cut(s)	7, 1226
MhlI	GDGCHC	9 cut(s)	173, 357, 438, 687, 707, 728, 1089, 1149, 1279
MlsI	TGGCCA	1 cut(s)	1266
MluCI	AATT	7 cut(s)	616, 661, 677, 785, 973, 1215, 1243
MluNI	TGGCCA	1 cut(s)	1266
MlyI	GAGTC	2 cut(s)	116, 158
MmeI	TCCRAC	2 cut(s)	18, 144
Mox20I	TGGCCA	1 cut(s)	1266
Mph1103I	ATGCAT	1 cut(s)	1263
MroI	TCCGGA	1 cut(s)	73
MroNI	GCCGGC	1 cut(s)	310
MscI	TGGCCA	1 cut(s)	1266
MseI	TTAA	3 cut(s)	12, 588, 942
MslI	CAYNNNNRTG	1 cut(s)	756
Msp20I	TGGCCA	1 cut(s)	1266
MspA1I	CMGCKG	2 cut(s)	359, 1343
MspI	CCGG	6 cut(s)	74, 84, 111, 266, 281, 311
MspR9I	CCNGG	4 cut(s)	112, 282, 439, 1268
MunI	CAATTG	1 cut(s)	1243
MvaI	CCWGG	2 cut(s)	439, 1268
MvnI	CGCG	3 cut(s)	92, 180, 359
NaeI	GCCGGC	1 cut(s)	312
NciI	CCSGG	2 cut(s)	112, 282
NdeII	GATC	6 cut(s)	7, 29, 339, 574, 967, 1226
NgoMIV	GCCGGC	1 cut(s)	310
NlaIII	CATG	2 cut(s)	557, 1265
NlaIV	GGNNCC	5 cut(s)	82, 355, 435, 436, 1086
NmeAIII	GCCGAG	1 cut(s)	771
NmuCI	GTSAC	4 cut(s)	187, 247, 466, 889
NsiI	ATGCAT	1 cut(s)	1263
OliI	CACNNNNGTG	1 cut(s)	756
PaeR7I	CTCGAG	1 cut(s)	715
PaqCI	CACCTGC	1 cut(s)	403
PciSI	GCTCTTC	1 cut(s)	416
PcsI	WCGNNNNNNNCGW	4 cut(s)	54, 57, 122, 138
PdiI	GCCGGC	1 cut(s)	312
PfeI	GAWTC	3 cut(s)	497, 1189, 1314
PflFI	GACNNNGTC	1 cut(s)	239
PfoI	TCCNGGA	1 cut(s)	110
Ple19I	CGATCG	1 cut(s)	577
PleI	GAGTC	2 cut(s)	115, 158
PpsI	GAGTC	2 cut(s)	115, 158
PpuMI	RGGWCCY	1 cut(s)	1235
Psp124BI	GAGCTC	1 cut(s)	728
Psp5II	RGGWCCY	1 cut(s)	1235
Psp6I	CCWGG	2 cut(s)	437, 1266
PspFI	CCCAGC	1 cut(s)	25
PspGI	CCWGG	2 cut(s)	437, 1266
PspN4I	GGNNCC	5 cut(s)	82, 355, 435, 436, 1086
PspOMI	GGGCCC	2 cut(s)	353, 434
PspPI	GGNCC	6 cut(s)	353, 354, 434, 435, 1046, 1235
PspPPI	RGGWCCY	1 cut(s)	1235
PstI	CTGCAG	1 cut(s)	1303
PsuI	RGATCY	2 cut(s)	7, 1226
PsyI	GACNNNGTC	1 cut(s)	239
PvuI	CGATCG	1 cut(s)	577
RsaI	GTAC	3 cut(s)	305, 458, 910
RsaNI	GTAC	3 cut(s)	304, 457, 909
RseI	CAYNNNNRTG	1 cut(s)	756
SacI	GAGCTC	1 cut(s)	728
SacII	CCGCGG	1 cut(s)	360
SapI	GCTCTTC	1 cut(s)	416
SaqAI	TTAA	3 cut(s)	12, 588, 942
Sau3AI	GATC	6 cut(s)	7, 29, 339, 574, 967, 1226
Sau96I	GGNCC	6 cut(s)	353, 354, 434, 435, 1046, 1235
ScaI	AGTACT	2 cut(s)	305, 910
SchI	GAGTC	2 cut(s)	116, 158
ScrFI	CCNGG	4 cut(s)	112, 282, 439, 1268
SduI	GDGCHC	9 cut(s)	173, 357, 438, 687, 707, 728, 1089, 1149, 1279
SfaNI	GCATC	4 cut(s)	323, 595, 1036, 1313
SfcI	CTRYAG	2 cut(s)	475, 1299
Sfr274I	CTCGAG	1 cut(s)	715
Sfr303I	CCGCGG	1 cut(s)	360
SgrBI	CCGCGG	1 cut(s)	360
SinI	GGWCC	1 cut(s)	1235
SlaI	CTCGAG	1 cut(s)	715
SmiMI	CAYNNNNRTG	1 cut(s)	756
SmlI	CTYRAG	4 cut(s)	212, 715, 727, 1230
SmoI	CTYRAG	4 cut(s)	212, 715, 727, 1230
Sse9I	AATT	7 cut(s)	616, 661, 677, 785, 973, 1215, 1243
SspMI	CTAG	2 cut(s)	564, 1176
SstI	GAGCTC	1 cut(s)	728
StyD4I	CCNGG	4 cut(s)	110, 280, 437, 1266
StyI	CCWWGG	1 cut(s)	669
TaaI	ACNGT	3 cut(s)	275, 827, 1290
TaiI	ACGT	6 cut(s)	54, 119, 197, 243, 697, 1427
TaqI	TCGA	6 cut(s)	204, 342, 577, 716, 775, 822
TasI	AATT	7 cut(s)	616, 661, 677, 785, 973, 1215, 1243
TatI	WGTACW	3 cut(s)	303, 456, 908
TauI	GCSGC	2 cut(s)	185, 1415
TfiI	GAWTC	3 cut(s)	497, 1189, 1314
Tru1I	TTAA	3 cut(s)	12, 588, 942
Tru9I	TTAA	3 cut(s)	12, 588, 942
TscAI	CASTG	7 cut(s)	553, 634, 712, 753, 832, 1279, 1293
TseFI	GTSAC	4 cut(s)	187, 247, 466, 889
TseI	GCWGC	9 cut(s)	87, 298, 557, 560, 581, 839, 860, 1301, 1343
Tsp45I	GTSAC	4 cut(s)	187, 247, 466, 889
TspDTI	ATGAA	4 cut(s)	662, 671, 960, 984
TspGWI	ACGGA	2 cut(s)	118, 1326
TspRI	CASTG	7 cut(s)	553, 634, 712, 753, 832, 1279, 1293
Tth111I	GACNNNGTC	1 cut(s)	239
VneI	GTGCAC	1 cut(s)	683
VpaK11BI	GGWCC	1 cut(s)	1235
XagI	CCTNNNNNAGG	1 cut(s)	1122
XapI	RAATTY	3 cut(s)	661, 677, 973
XhoI	CTCGAG	1 cut(s)	715
XspI	CTAG	2 cut(s)	564, 1176
ZraI	GACGTC	3 cut(s)	52, 117, 241
ZrmI	AGTACT	2 cut(s)	305, 910
Zsp2I	ATGCAT	1 cut(s)	1263

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.