Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5A

Orthogroup ID

OG0003382

Physical Location & Seq

Genomic Coordinates Reverse (-)

69763571 .. 69767776

Gene Structure 4206 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5AG403200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1464 bp

ATGTTGGATCTTAATCTCAGCGTGGTGGGATCGTCGTCGGAACAAAACGACGTCTTCGTCGTCGGCTCGGTTCACGGTATGTTTCCGGAAGGCTCCGGCAGCGCGACGCAAATGGACGAGTCCGGGACGTCGAACTCGTCCGTAGTCAATGCCGCCGACGCCTCCAGCACCAACGACGACTCGTGCTCCGCACGCGCCGCCGTGACGACGTTTAACTTCGATATTCTCAAGGTCGATGGAGGAGGAGAAGAAGACGACGTCGCTGTGACGAAGGAGCTGTTTCCGGTGAACAGTTGGCCGGGGAAGGGGCAGGGGCAGCAGTACTCGCCGGCATCATCGTCGGCGAGGCACAAGTTGATCGAGCTTGGTGGGCCCGCGGAGGTTCAGCAGAAACAGCCACAGCCACAACCACCGCCACCGCCACCGCCACCACAACAACCGCAGGTGAAGAAGAGCAGGAGGGGGCCCAGGTCTCGGAGTTCTCAGTACAGAGGGGTCACTTTCTATAGAAGAACTGGTAGATGGGAATCGCATATTTGGGATTGTGGCAAACAAGTGTATTTGGGTGGATTTGACACTGCTCATGCTGCTGCTAGAGCCTACGATCGAGCTGCGATTAAGTTCAGGGGAGTTGATGCTGATATCAATTACAATCTCAGTGATTATGAGGAGGATATGAAACAGATGAAGAATTTGACCAAGGAAGAATTCGTGCACATACTACGTCGGCAGAGCACTGGTTTCTCGAGGGGGAGCTCAAGATATAGAGGGGTTACACTGCACAAATGTGGTCGTTGGGAAGCTCGAATGGGGCAATTCCTCGGCAAAAAGTATATATATCTTGGGCTATTCGACAGTGAAGTAGAAGCTGCAAGGGCTTATGACAAGGCAGCTATCAAATGTAATGGAAGGGAAGCTGTCACCAACTTTGAGGCAAGTACTTACGAAGGGGAGATGATATCTGACGCTGTTAATGAAGATGGCAATCACAATCTTGATCTGAATTTGGGAATATCTCCTCCTTCATTTGGTAATGGTCAGAAGCAAGGCGAGGGGCATCTTCAGTTCCATTCTGGCCCTTATGAGGGGCAAAATGGAAAGAATATGAGGATGGTGCCCAATGCAAATGCAACAATGACTGCTCCACCTTTCAGAGGCGTAATAATGACATCAGAGCACCCTCCTTTATGGAATGGTGTATATCCTAGTTTCCTTCCGAATCAGGAAAGAGCAATAGAGAAGAGAATTGCATTAGGATCTCAAGGACCTCCCAATTGGGCTTGGCAAATGCATGGCCAGGTCAGTGCCCCAATGCCACTGTTCTCTACTGCAGCATCATCAGGATTCTCATTTACAGCTACCACTCCGTCCGCTGCTGTCCTCCCCATAATCCCCTCGAACCCAACCGCCGTCAACCTCTGTTTTACATCTTCAGCCACGGCCGCCCACCATACGTCTCAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AP2

Protein Analysis

487

Amino Acids

52.93

Weight (kDa)

6.68

Isoelectric Point (pI)

51.45

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AP2	PF00847	162 - 210	6.3e-10	AP2 domain
AP2	PF00847	253 - 303	1.1e-08	AP2 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003382)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G28550 AT2G28550 AT2G28550 AT2G28550 AT2G28550 AT2G28550 AT5G67180 AT5G67180 AT5G67180
fragaria_vesca	FvH4_3g33940 FvH4_3g33940 FvH4_3g33940 FvH4_3g33940 FvH4_3g33940 FvH4_3g33940 FvH4_3g33940
malus_domestica	MD03G1107900.v1.1 MD11G1121200.v1.1
prunus_persica	Prupe.6G091100_v2.0.a1 Prupe.6G091100_v2.0.a1 Prupe.6G091100_v2.0.a1
pyrus_communis	pycom03g08790 pycom11g10230
rosa_chinensis	RchiOBHm_Chr5g0061491 RchiOBHm_Chr5g0061501
rosa_laevigata	RLG00000035482
rosa_multiflora	Rmu_sc0006126.1_g000010
rosa_roxburghii	Rroxscaffold_1G00019170
rosa_rugosa	Rorug05G0341000 Rorug05G0341100 Rorug05G0341200
rosa_samantha	Rh5AG403200 Rh5BG415600 Rh5CG440300 Rh5DG430100
rosa_wichuraiana	Rw5G037920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	433
AasI	GACNNNNNNGTC	1 cut(s)	56
AatII	GACGTC	3 cut(s)	54, 131, 261
Acc36I	ACCTGC	1 cut(s)	433
AccB1I	GGYRCC	1 cut(s)	1114
AccII	CGCG	3 cut(s)	104, 195, 377
AccIII	TCCGGA	1 cut(s)	85
AclWI	GGATC	3 cut(s)	15, 37, 1264
AcoI	YGGCCR	3 cut(s)	296, 1294, 1440
AcsI	RAATTY	3 cut(s)	691, 707, 1003
AcuI	CTGAAG	2 cut(s)	1046, 1416
AcyI	GRCGYC	4 cut(s)	51, 128, 159, 258
AfaI	GTAC	3 cut(s)	323, 488, 940
AfiI	CCNNNNNNNGG	6 cut(s)	305, 474, 1028, 1084, 1085, 1154
AjnI	CCWGG	2 cut(s)	467, 1296
AjuI	GAANNNNNNNTTGG	2 cut(s)	692, 724
AleI	CACNNNNGTG	1 cut(s)	786
AluBI	AGCT	9 cut(s)	277, 364, 611, 756, 803, 869, 893, 917, 1358
AluI	AGCT	9 cut(s)	277, 364, 611, 756, 803, 869, 893, 917, 1358
Alw21I	GWGCWC	5 cut(s)	188, 717, 737, 758, 1179
Alw26I	GTCTC	1 cut(s)	477
Alw44I	GTGCAC	1 cut(s)	713
AlwI	GGATC	3 cut(s)	15, 37, 1264
Ama87I	CYCGRG	1 cut(s)	745
Aor13HI	TCCGGA	1 cut(s)	85
AoxI	GGCC	6 cut(s)	296, 371, 464, 1075, 1294, 1440
ApaI	GGGCCC	2 cut(s)	375, 468
ApaLI	GTGCAC	1 cut(s)	713
ApeKI	GCWGC	9 cut(s)	99, 316, 587, 590, 611, 869, 890, 1331, 1373
ApoI	RAATTY	3 cut(s)	691, 707, 1003
AspLEI	GCGC	2 cut(s)	104, 197
AspS9I	GGNCC	6 cut(s)	371, 372, 464, 465, 1076, 1265
AsuC2I	CCSGG	2 cut(s)	124, 300
AsuHPI	GGTGA	3 cut(s)	298, 457, 913
AvaI	CYCGRG	1 cut(s)	745
AvaII	GGWCC	1 cut(s)	1265
BaeGI	GKGCMC	5 cut(s)	375, 468, 717, 1119, 1309
BalI	TGGCCA	1 cut(s)	1296
BanI	GGYRCC	1 cut(s)	1114
BanII	GRGCYC	3 cut(s)	375, 468, 758
BauI	CACGAG	1 cut(s)	181
BbsI	GAAGAC	2 cut(s)	46, 258
Bbv12I	GWGCWC	5 cut(s)	188, 717, 737, 758, 1179
BbvI	GCAGC	9 cut(s)	111, 328, 574, 577, 598, 856, 902, 1343, 1360
BccI	CCATC	4 cut(s)	230, 516, 974, 1105
BceAI	ACGGC	3 cut(s)	185, 1394, 1455
BcgI	CGANNNNNNTGC	4 cut(s)	321, 355, 593, 627
BciT130I	CCWGG	2 cut(s)	469, 1298
BcnI	CCSGG	2 cut(s)	124, 300
BcoDI	GTCTC	1 cut(s)	477
BfaI	CTAG	2 cut(s)	594, 1206
BfmI	CTRYAG	2 cut(s)	505, 1329
BfuAI	ACCTGC	1 cut(s)	433
BmcAI	AGTACT	2 cut(s)	323, 940
Bme1390I	CCNGG	4 cut(s)	124, 300, 469, 1298
Bme18I	GGWCC	1 cut(s)	1265
BmeT110I	CYCGRG	1 cut(s)	745
BmgT120I	GGNCC	6 cut(s)	371, 372, 464, 465, 1076, 1265
BmiI	GGNNCC	5 cut(s)	94, 373, 465, 466, 1116
BmrFI	CCNGG	4 cut(s)	124, 300, 469, 1298
BmsI	GCATC	4 cut(s)	341, 625, 1066, 1343
BpiI	GAAGAC	2 cut(s)	46, 258
BpmI	CTGGAG	1 cut(s)	148
BpuEI	CTTGAG	3 cut(s)	212, 742, 1245
BpuMI	CCSGG	2 cut(s)	124, 300
BsaBI	GATNNNNATC	3 cut(s)	12, 526, 984
BsaHI	GRCGYC	4 cut(s)	51, 128, 159, 258
BsaI	GGTCTC	1 cut(s)	477
BsaJI	CCNNGG	6 cut(s)	299, 375, 467, 699, 820, 1437
BsaWI	WCCGGW	2 cut(s)	85, 283
BsaXI	ACNNNNNCTCC	2 cut(s)	170, 200
Bsc4I	CCNNNNNNNGG	6 cut(s)	305, 474, 1028, 1084, 1085, 1154
Bse118I	RCCGGY	1 cut(s)	328
Bse1I	ACTGG	2 cut(s)	520, 742
Bse8I	GATNNNNATC	3 cut(s)	12, 526, 984
BseAI	TCCGGA	1 cut(s)	85
BseBI	CCWGG	2 cut(s)	469, 1298
BseDI	CCNNGG	6 cut(s)	299, 375, 467, 699, 820, 1437
BseGI	GGATG	1 cut(s)	1116
BseJI	GATNNNNATC	3 cut(s)	12, 526, 984
BseLI	CCNNNNNNNGG	6 cut(s)	305, 474, 1028, 1084, 1085, 1154
BseMII	CTCAG	3 cut(s)	31, 497, 670
BseNI	ACTGG	2 cut(s)	520, 742
BseRI	GAGGAG	4 cut(s)	255, 258, 683, 1008
BseSI	GKGCMC	5 cut(s)	375, 468, 717, 1119, 1309
BseX3I	CGGCCG	1 cut(s)	1440
BseXI	GCAGC	9 cut(s)	111, 328, 574, 577, 598, 856, 902, 1343, 1360
BsgI	GTGCAG	1 cut(s)	764
Bsh1236I	CGCG	3 cut(s)	104, 195, 377
Bsh1285I	CGRYCG	2 cut(s)	607, 1443
BshFI	GGCC	6 cut(s)	298, 373, 466, 1077, 1296, 1442
BshNI	GGYRCC	1 cut(s)	1114
BsiEI	CGRYCG	2 cut(s)	607, 1443
BsiHKAI	GWGCWC	5 cut(s)	188, 717, 737, 758, 1179
BsiHKCI	CYCGRG	1 cut(s)	745
BsiSI	CCGG	6 cut(s)	86, 96, 123, 284, 299, 329
BslFI	GGGAC	1 cut(s)	139
BslI	CCNNNNNNNGG	6 cut(s)	305, 474, 1028, 1084, 1085, 1154
BsmAI	GTCTC	1 cut(s)	477
BsmFI	GGGAC	1 cut(s)	139
BsnI	GGCC	6 cut(s)	298, 373, 466, 1077, 1296, 1442
Bso31I	GGTCTC	1 cut(s)	477
BsoBI	CYCGRG	1 cut(s)	745
Bsp120I	GGGCCC	2 cut(s)	371, 464
Bsp1286I	GDGCHC	9 cut(s)	188, 375, 468, 717, 737, 758, 1119, 1179, 1309
Bsp13I	TCCGGA	1 cut(s)	85
Bsp143I	GATC	6 cut(s)	7, 29, 357, 604, 997, 1256
BspANI	GGCC	6 cut(s)	298, 373, 466, 1077, 1296, 1442
BspCNI	CTCAG	3 cut(s)	30, 496, 669
BspEI	TCCGGA	1 cut(s)	85
BspFNI	CGCG	3 cut(s)	104, 195, 377
BspLI	GGNNCC	5 cut(s)	94, 373, 465, 466, 1116
BspMAI	CTGCAG	1 cut(s)	1333
BspMI	ACCTGC	1 cut(s)	433
BspPI	GGATC	3 cut(s)	15, 37, 1264
BspQI	GCTCTTC	1 cut(s)	446
BspT107I	GGYRCC	1 cut(s)	1114
BspTNI	GGTCTC	1 cut(s)	477
BsrFI	RCCGGY	1 cut(s)	328
BsrI	ACTGG	2 cut(s)	520, 742
BssAI	RCCGGY	1 cut(s)	328
BssECI	CCNNGG	6 cut(s)	299, 375, 467, 699, 820, 1437
BssMI	GATC	6 cut(s)	7, 29, 357, 604, 997, 1256
BssNI	GRCGYC	4 cut(s)	51, 128, 159, 258
BssSI	CACGAG	1 cut(s)	181
BssT1I	CCWWGG	1 cut(s)	699
Bst2BI	CACGAG	1 cut(s)	181
Bst2UI	CCWGG	2 cut(s)	469, 1298
Bst4CI	ACNGT	4 cut(s)	77, 293, 857, 1320
Bst6I	CTCTTC	2 cut(s)	446, 1235
BstACI	GRCGYC	4 cut(s)	51, 128, 159, 258
BstC8I	GCNNGC	3 cut(s)	193, 330, 375
BstDEI	CTNAG	3 cut(s)	17, 483, 656
BstDSI	CCRYGG	2 cut(s)	375, 1437
BstENI	CCTNNNNNAGG	1 cut(s)	1152
BstF5I	GGATG	1 cut(s)	1116
BstFNI	CGCG	3 cut(s)	104, 195, 377
BstHHI	GCGC	2 cut(s)	104, 197
BstKTI	GATC	6 cut(s)	10, 32, 360, 607, 1000, 1259
BstMAI	GTCTC	1 cut(s)	477
BstMBI	GATC	6 cut(s)	7, 29, 357, 604, 997, 1256
BstMCI	CGRYCG	2 cut(s)	607, 1443
BstNI	CCWGG	2 cut(s)	469, 1298
BstSCI	CCNGG	4 cut(s)	122, 298, 467, 1296
BstSFI	CTRYAG	2 cut(s)	505, 1329
BstSLI	GKGCMC	5 cut(s)	375, 468, 717, 1119, 1309
BstUI	CGCG	3 cut(s)	104, 195, 377
BstV1I	GCAGC	9 cut(s)	111, 328, 574, 577, 598, 856, 902, 1343, 1360
BstV2I	GAAGAC	2 cut(s)	46, 258
BstX2I	RGATCY	2 cut(s)	7, 1256
BstYI	RGATCY	2 cut(s)	7, 1256
BstZI	CGGCCG	1 cut(s)	1440
BsuRI	GGCC	6 cut(s)	298, 373, 466, 1077, 1296, 1442
BtgI	CCRYGG	2 cut(s)	375, 1437
BtsCI	GGATG	1 cut(s)	1116
BtsI	GCAGTG	2 cut(s)	576, 776
BtsIMutI	CAGTG	7 cut(s)	576, 664, 735, 776, 862, 1309, 1316
BveI	ACCTGC	1 cut(s)	433
Cac8I	GCNNGC	3 cut(s)	193, 330, 375
CfoI	GCGC	2 cut(s)	104, 197
Cfr10I	RCCGGY	1 cut(s)	328
Cfr13I	GGNCC	6 cut(s)	371, 372, 464, 465, 1076, 1265
Cfr42I	CCGCGG	1 cut(s)	378
CseI	GACGC	3 cut(s)	115, 167, 974
Csp6I	GTAC	3 cut(s)	322, 487, 939
CviAII	CATG	2 cut(s)	584, 1292
CviQI	GTAC	3 cut(s)	322, 487, 939
DdeI	CTNAG	3 cut(s)	17, 483, 656
DpnI	GATC	6 cut(s)	9, 31, 359, 606, 999, 1258
DpnII	GATC	6 cut(s)	7, 29, 357, 604, 997, 1256
DrdI	GACNNNNNNGTC	1 cut(s)	56
DseDI	GACNNNNNNGTC	1 cut(s)	56
EaeI	YGGCCR	3 cut(s)	296, 1294, 1440
EagI	CGGCCG	1 cut(s)	1440
Eam1104I	CTCTTC	2 cut(s)	446, 1235
EarI	CTCTTC	2 cut(s)	446, 1235
Ecl136II	GAGCTC	1 cut(s)	756
EclXI	CGGCCG	1 cut(s)	1440
Eco130I	CCWWGG	1 cut(s)	699
Eco24I	GRGCYC	3 cut(s)	375, 468, 758
Eco31I	GGTCTC	1 cut(s)	477
Eco32I	GATATC	2 cut(s)	643, 960
Eco47I	GGWCC	1 cut(s)	1265
Eco52I	CGGCCG	1 cut(s)	1440
Eco53kI	GAGCTC	1 cut(s)	756
Eco57I	CTGAAG	2 cut(s)	1046, 1416
Eco88I	CYCGRG	1 cut(s)	745
EcoICRI	GAGCTC	1 cut(s)	756
EcoNI	CCTNNNNNAGG	1 cut(s)	1152
EcoO109I	RGGNCCY	2 cut(s)	464, 1265
EcoRI	GAATTC	1 cut(s)	707
EcoRII	CCWGG	2 cut(s)	467, 1296
EcoRV	GATATC	2 cut(s)	643, 960
EcoT14I	CCWWGG	1 cut(s)	699
EcoT22I	ATGCAT	1 cut(s)	1293
EcoT38I	GRGCYC	3 cut(s)	375, 468, 758
ErhI	CCWWGG	1 cut(s)	699
FaeI	CATG	2 cut(s)	587, 1295
FaqI	GGGAC	1 cut(s)	139
FatI	CATG	2 cut(s)	583, 1291
FauI	CCCGC	1 cut(s)	382
FokI	GGATG	1 cut(s)	1123
FriOI	GRGCYC	3 cut(s)	375, 468, 758
FspBI	CTAG	2 cut(s)	594, 1206
GlaI	GCGC	2 cut(s)	103, 196
GsuI	CTGGAG	1 cut(s)	148
HaeIII	GGCC	6 cut(s)	298, 373, 466, 1077, 1296, 1442
HapII	CCGG	6 cut(s)	86, 96, 123, 284, 299, 329
HgaI	GACGC	3 cut(s)	115, 167, 974
HhaI	GCGC	2 cut(s)	104, 197
Hin1I	GRCGYC	4 cut(s)	51, 128, 159, 258
Hin1II	CATG	2 cut(s)	587, 1295
Hin6I	GCGC	2 cut(s)	102, 195
HinP1I	GCGC	2 cut(s)	102, 195
HincII	GTYRAC	1 cut(s)	1414
HindII	GTYRAC	1 cut(s)	1414
HinfI	GANTC	5 cut(s)	119, 179, 527, 1219, 1344
HpaII	CCGG	6 cut(s)	86, 96, 123, 284, 299, 329
HphI	GGTGA	3 cut(s)	298, 457, 913
Hpy166II	GTNNAC	4 cut(s)	73, 289, 715, 1414
Hpy188I	TCNGA	8 cut(s)	40, 477, 964, 1002, 1041, 1154, 1174, 1218
Hpy188III	TCNNGA	6 cut(s)	86, 745, 759, 995, 1223, 1341
Hpy8I	GTNNAC	4 cut(s)	73, 289, 715, 1414
HpyAV	CCTTC	7 cut(s)	83, 265, 298, 903, 941, 1032, 1223
HpyCH4III	ACNGT	4 cut(s)	77, 293, 857, 1320
HpyCH4IV	ACGT	6 cut(s)	51, 128, 209, 258, 724, 1454
HpyCH4V	TGCA	8 cut(s)	715, 781, 872, 1124, 1130, 1250, 1291, 1331
HpyF3I	CTNAG	3 cut(s)	17, 483, 656
HpySE526I	ACGT	6 cut(s)	51, 128, 209, 258, 724, 1454
Hsp92I	GRCGYC	4 cut(s)	51, 128, 159, 258
Hsp92II	CATG	2 cut(s)	587, 1295
HspAI	GCGC	2 cut(s)	102, 195
Kpn2I	TCCGGA	1 cut(s)	85
KroI	GCCGGC	1 cut(s)	328
KroNI	GCCGGC	1 cut(s)	330
KspI	CCGCGG	1 cut(s)	378
Kzo9I	GATC	6 cut(s)	7, 29, 357, 604, 997, 1256
LguI	GCTCTTC	1 cut(s)	446
LmnI	GCTCC	5 cut(s)	98, 191, 274, 753, 1147
Lsp1109I	GCAGC	9 cut(s)	111, 328, 574, 577, 598, 856, 902, 1343, 1360
LweI	GCATC	4 cut(s)	341, 625, 1066, 1343
MaeI	CTAG	2 cut(s)	594, 1206
MaeII	ACGT	6 cut(s)	51, 128, 209, 258, 724, 1454
MaeIII	GTNAC	5 cut(s)	202, 265, 496, 772, 919
MalI	GATC	6 cut(s)	9, 31, 359, 606, 999, 1258
MboI	GATC	6 cut(s)	7, 29, 357, 604, 997, 1256
MfeI	CAATTG	1 cut(s)	1273
MflI	RGATCY	2 cut(s)	7, 1256
MhlI	GDGCHC	9 cut(s)	188, 375, 468, 717, 737, 758, 1119, 1179, 1309
MlsI	TGGCCA	1 cut(s)	1296
MluCI	AATT	7 cut(s)	646, 691, 707, 815, 1003, 1245, 1273
MluNI	TGGCCA	1 cut(s)	1296
MlyI	GAGTC	2 cut(s)	128, 173
MmeI	TCCRAC	1 cut(s)	18
Mox20I	TGGCCA	1 cut(s)	1296
Mph1103I	ATGCAT	1 cut(s)	1293
MroI	TCCGGA	1 cut(s)	85
MroNI	GCCGGC	1 cut(s)	328
MscI	TGGCCA	1 cut(s)	1296
MseI	TTAA	4 cut(s)	12, 213, 618, 972
MslI	CAYNNNNRTG	1 cut(s)	786
Msp20I	TGGCCA	1 cut(s)	1296
MspA1I	CMGCKG	2 cut(s)	377, 1373
MspI	CCGG	6 cut(s)	86, 96, 123, 284, 299, 329
MspR9I	CCNGG	4 cut(s)	124, 300, 469, 1298
MunI	CAATTG	1 cut(s)	1273
MvaI	CCWGG	2 cut(s)	469, 1298
MvnI	CGCG	3 cut(s)	104, 195, 377
NaeI	GCCGGC	1 cut(s)	330
NciI	CCSGG	2 cut(s)	124, 300
NdeII	GATC	6 cut(s)	7, 29, 357, 604, 997, 1256
NgoMIV	GCCGGC	1 cut(s)	328
NlaIII	CATG	2 cut(s)	587, 1295
NlaIV	GGNNCC	5 cut(s)	94, 373, 465, 466, 1116
NmeAIII	GCCGAG	1 cut(s)	801
NmuCI	GTSAC	4 cut(s)	202, 265, 496, 919
NsiI	ATGCAT	1 cut(s)	1293
OliI	CACNNNNGTG	1 cut(s)	786
PaeR7I	CTCGAG	1 cut(s)	745
PaqCI	CACCTGC	1 cut(s)	433
PciSI	GCTCTTC	1 cut(s)	446
PcsI	WCGNNNNNNNCGW	3 cut(s)	54, 57, 134
PdiI	GCCGGC	1 cut(s)	330
PfeI	GAWTC	3 cut(s)	527, 1219, 1344
PflFI	GACNNNGTC	1 cut(s)	257
PfoI	TCCNGGA	1 cut(s)	122
Ple19I	CGATCG	1 cut(s)	607
PleI	GAGTC	2 cut(s)	127, 173
PpsI	GAGTC	2 cut(s)	127, 173
PpuMI	RGGWCCY	1 cut(s)	1265
Psp124BI	GAGCTC	1 cut(s)	758
Psp5II	RGGWCCY	1 cut(s)	1265
Psp6I	CCWGG	2 cut(s)	467, 1296
PspGI	CCWGG	2 cut(s)	467, 1296
PspN4I	GGNNCC	5 cut(s)	94, 373, 465, 466, 1116
PspOMI	GGGCCC	2 cut(s)	371, 464
PspPI	GGNCC	6 cut(s)	371, 372, 464, 465, 1076, 1265
PspPPI	RGGWCCY	1 cut(s)	1265
PstI	CTGCAG	1 cut(s)	1333
PsuI	RGATCY	2 cut(s)	7, 1256
PsyI	GACNNNGTC	1 cut(s)	257
PvuI	CGATCG	1 cut(s)	607
RsaI	GTAC	3 cut(s)	323, 488, 940
RsaNI	GTAC	3 cut(s)	322, 487, 939
RseI	CAYNNNNRTG	1 cut(s)	786
SacI	GAGCTC	1 cut(s)	758
SacII	CCGCGG	1 cut(s)	378
SapI	GCTCTTC	1 cut(s)	446
SaqAI	TTAA	4 cut(s)	12, 213, 618, 972
Sau3AI	GATC	6 cut(s)	7, 29, 357, 604, 997, 1256
Sau96I	GGNCC	6 cut(s)	371, 372, 464, 465, 1076, 1265
ScaI	AGTACT	2 cut(s)	323, 940
SchI	GAGTC	2 cut(s)	128, 173
ScrFI	CCNGG	4 cut(s)	124, 300, 469, 1298
SduI	GDGCHC	9 cut(s)	188, 375, 468, 717, 737, 758, 1119, 1179, 1309
SfaNI	GCATC	4 cut(s)	341, 625, 1066, 1343
SfcI	CTRYAG	2 cut(s)	505, 1329
Sfr274I	CTCGAG	1 cut(s)	745
Sfr303I	CCGCGG	1 cut(s)	378
SgrBI	CCGCGG	1 cut(s)	378
SinI	GGWCC	1 cut(s)	1265
SlaI	CTCGAG	1 cut(s)	745
SmiMI	CAYNNNNRTG	1 cut(s)	786
SmlI	CTYRAG	4 cut(s)	227, 745, 757, 1260
SmoI	CTYRAG	4 cut(s)	227, 745, 757, 1260
Sse9I	AATT	7 cut(s)	646, 691, 707, 815, 1003, 1245, 1273
SspMI	CTAG	2 cut(s)	594, 1206
SstI	GAGCTC	1 cut(s)	758
StyD4I	CCNGG	4 cut(s)	122, 298, 467, 1296
StyI	CCWWGG	1 cut(s)	699
TaaI	ACNGT	4 cut(s)	77, 293, 857, 1320
TaiI	ACGT	6 cut(s)	54, 131, 212, 261, 727, 1457
TaqI	TCGA	9 cut(s)	131, 219, 234, 360, 607, 746, 805, 852, 1397
TasI	AATT	7 cut(s)	646, 691, 707, 815, 1003, 1245, 1273
TatI	WGTACW	3 cut(s)	321, 486, 938
TauI	GCSGC	3 cut(s)	155, 200, 1445
TfiI	GAWTC	3 cut(s)	527, 1219, 1344
Tru1I	TTAA	4 cut(s)	12, 213, 618, 972
Tru9I	TTAA	4 cut(s)	12, 213, 618, 972
TscAI	CASTG	7 cut(s)	583, 664, 742, 783, 862, 1309, 1323
TseFI	GTSAC	4 cut(s)	202, 265, 496, 919
TseI	GCWGC	9 cut(s)	99, 316, 587, 590, 611, 869, 890, 1331, 1373
Tsp45I	GTSAC	4 cut(s)	202, 265, 496, 919
TspDTI	ATGAA	4 cut(s)	692, 701, 990, 1014
TspGWI	ACGGA	2 cut(s)	130, 1356
TspRI	CASTG	7 cut(s)	583, 664, 742, 783, 862, 1309, 1323
Tth111I	GACNNNGTC	1 cut(s)	257
VneI	GTGCAC	1 cut(s)	713
VpaK11BI	GGWCC	1 cut(s)	1265
XagI	CCTNNNNNAGG	1 cut(s)	1152
XapI	RAATTY	3 cut(s)	691, 707, 1003
XhoI	CTCGAG	1 cut(s)	745
XspI	CTAG	2 cut(s)	594, 1206
ZraI	GACGTC	3 cut(s)	52, 129, 259
ZrmI	AGTACT	2 cut(s)	323, 940
Zsp2I	ATGCAT	1 cut(s)	1293

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.