Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0003382

Physical Location & Seq

Genomic Coordinates Reverse (-)

41627109 .. 41631661

Gene Structure 4553 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0341200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1839 bp

ATGCTGGCGCGTAAAATGGTGCCGATCAACATTGAAAGCTGGCCTGCAGTGGACAAAGACTTGAAAGATAAAATTTGGATTGATGTCCAGGATACATTCAAAGTGGCCCCTGAAAGCAAGAAATTGGTGTTGACATCTGCCGGCACTAAATGGAGACAATTCAAGACCTACTTAACAAATAAGCATGTGCTGCCATACTTGGGGAAGAAGAAGAAACTGAGGAAGCCACCGAAGCAATATGCATTCGTTGGGTTACAACCATGGAAGGAATTTGTAACTCAGAGGAAGACAGAGGAATGGCTGAAACTTAACAATGACCAAAGGGAACGAGTCAAGAAGAGAAAATATCATCATAGATTATCAAGAAAGGGATATATTGGACTGGAGGAAGAATTGAGAGATACTTGGCCTGAAGGAGAGGTAATTGATCGCGCTATTATGTGGAAGAAAGCCCGTTTACTAAAAAATGGGGAGATAAGTGAAGAGGTCACACCGGTAGCAAGAAAGATAGATGAATTGTTGGAGAAGAAGAGTAAGGGTGAGCTAGAAATATCAGGGAGCGATGATGTTCTCAATCAAGCACTAGAAACTTCTGAACACTCGGGTAGGGTGAGGGGTGTTGGAGGCTTCGTCAATCCGTCCACCTACTTTAAGCTTCCAAAGCAGAAAAGGGTCAGAATTACCAAGGCAGAATTAATGGCACGTGATAGAGAGCGTAATCGGGAGTTGGAGGAGACAAAGAAAATGCTTATTGAAAAACAAGCAAAGGCAGAAGATCTCTTAAACAAAAGGATTGCTCAACTAGAAGCACTAATAACAGACAAGGCGAACTATGCACCCCATTCCCCTATATCAGATAAGGGCAGTTTTCATGATAGAGTGAAAAAAAATTCCCCTATATTAGATGACAAGGTGCAAGAAAATGTGGATGATTGTGAAATTGTTCCTCCACCTACTGATAAGGGTGGCGTATGTGAGTTGGCAGTGAATAACATCACCAACATAGTTGCTTTTGGTACCGTATTCGATGATGTGGATATTAATAAGATGATACATGGAGCTGCATTGAAGGAGGGATGCGTTAGAGTGTCAGTGGATGGTGAGATTCAAGGTGATGCACCACTTCCATGCCCTATAGCGGGTGAGATGGAATTGGTTCGAGAAGCCATTGGAAGTCACGTGGCTTGGCCTGAGGAGCTTGTAATTCGGAGACAGCCATCAAAGAAAAAGATAAGGAAGAATGATTTTGTCAAATCATTGTTCAATAAAGCTGAGGTCAACCCGTTTGTGCCCAAGCGCTGCAAGCTATTGTACAAACATGCCACAACAATCATGACACATACTAGTGAGGCAATATCCACAGTATTGGACGATAAAGTCTTTGGCGTACACAAAGAACTCTTCATCTTGACAGAGAATGTGATTGATCTGTTAGAAATGCAGAAGATTGGCCAAGGAGTGATAGCAGCATACATGGCCCACCTACATGAAGTTGTTACTGAAAGAGACGAGTTTGATAATTTTGCCTTTATTGATCCTGCTGCTACATATAACTGTGAGAGATCAGATTTTGGTTCCTATTTAGTGAATCGGTTGAAAGAGGGCAAGACTGATCGCATATTCTTTATGCCCTACAATCCAGGGGAACATTGGATATTGACAATCATATGGGAGGATGATATCTACATCTTGGACCCTTTGGGGAAATCAGTCCATTACCAAGCATGGGAGAACTCGGTGATAAATGCGGTTAAAAGTTTCAATGCTGAAACGGGTAGGGCTAACAAGGTGCTGAAATTGAAACTACTTCCGGTTAGTATGATATATGTGGTTGATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AP2

Protein Analysis

612

Amino Acids

70.13

Weight (kDa)

8.86

Isoelectric Point (pI)

34.32

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Transposase_24	PF03004	88 - 213	1.6e-07	Plant transposase (Ptta/En/Spm family)
DUF8039	PF26133	325 - 402	4.7e-12	Domain of unknown function (DUF8039)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003382)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G28550 AT2G28550 AT2G28550 AT2G28550 AT2G28550 AT2G28550 AT5G67180 AT5G67180 AT5G67180
fragaria_vesca	FvH4_3g33940 FvH4_3g33940 FvH4_3g33940 FvH4_3g33940 FvH4_3g33940 FvH4_3g33940 FvH4_3g33940
malus_domestica	MD03G1107900.v1.1 MD11G1121200.v1.1
prunus_persica	Prupe.6G091100_v2.0.a1 Prupe.6G091100_v2.0.a1 Prupe.6G091100_v2.0.a1
pyrus_communis	pycom03g08790 pycom11g10230
rosa_chinensis	RchiOBHm_Chr5g0061491 RchiOBHm_Chr5g0061501
rosa_laevigata	RLG00000035482
rosa_multiflora	Rmu_sc0006126.1_g000010
rosa_roxburghii	Rroxscaffold_1G00019170
rosa_rugosa	Rorug05G0341000 Rorug05G0341100 Rorug05G0341200
rosa_samantha	Rh5AG403200 Rh5BG415600 Rh5CG440300 Rh5DG430100
rosa_wichuraiana	Rw5G037920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1376
Acc65I	GGTACC	1 cut(s)	1016
AccB1I	GGYRCC	2 cut(s)	19, 1016
AccII	CGCG	2 cut(s)	10, 432
AciI	CCGC	2 cut(s)	1139, 1748
AclWI	GGATC	1 cut(s)	1529
AcoI	YGGCCR	1 cut(s)	1450
AcsI	RAATTY	3 cut(s)	72, 269, 889
AcuI	CTGAAG	1 cut(s)	432
AcvI	CACGTG	2 cut(s)	704, 1180
AfaI	GTAC	3 cut(s)	1018, 1313, 1389
AfeI	AGCGCT	1 cut(s)	1298
AfiI	CCNNNNNNNGG	4 cut(s)	200, 1138, 1139, 1726
AgeI	ACCGGT	1 cut(s)	493
AhlI	ACTAGT	1 cut(s)	1343
AjnI	CCWGG	2 cut(s)	87, 1639
AluBI	AGCT	7 cut(s)	39, 544, 655, 1061, 1198, 1271, 1306
AluI	AGCT	7 cut(s)	39, 544, 655, 1061, 1198, 1271, 1306
Alw26I	GTCTC	4 cut(s)	148, 728, 1204, 1500
AlwI	GGATC	1 cut(s)	1529
Ama87I	CYCGRG	1 cut(s)	601
Aor51HI	AGCGCT	1 cut(s)	1298
AoxI	GGCC	6 cut(s)	41, 105, 407, 1187, 1450, 1476
ApeKI	GCWGC	5 cut(s)	190, 1061, 1299, 1466, 1541
ApoI	RAATTY	3 cut(s)	72, 269, 889
AseI	ATTAAT	2 cut(s)	695, 1041
AsiGI	ACCGGT	1 cut(s)	493
Asp700I	GAANNNNTTC	2 cut(s)	942, 1155
Asp718I	GGTACC	1 cut(s)	1016
AspLEI	GCGC	3 cut(s)	10, 434, 1299
AspS9I	GGNCC	3 cut(s)	106, 1477, 1693
AsuHPI	GGTGA	7 cut(s)	551, 622, 988, 1112, 1124, 1154, 1750
AvaI	CYCGRG	1 cut(s)	601
AvaII	GGWCC	1 cut(s)	1693
AxyI	CCTNAGG	1 cut(s)	1191
BaeGI	GKGCMC	1 cut(s)	1293
BalI	TGGCCA	1 cut(s)	1452
BanI	GGYRCC	2 cut(s)	19, 1016
BbrPI	CACGTG	2 cut(s)	704, 1180
BbsI	GAAGAC	1 cut(s)	293
BbvCI	CCTCAGC	1 cut(s)	1272
BbvI	GCAGC	5 cut(s)	177, 1048, 1286, 1478, 1528
BccI	CCATC	3 cut(s)	1091, 1141, 1225
BciT130I	CCWGG	2 cut(s)	89, 1641
BciVI	GTATCC	1 cut(s)	85
BcoDI	GTCTC	4 cut(s)	148, 728, 1204, 1500
BcuI	ACTAGT	1 cut(s)	1343
BfaI	CTAG	4 cut(s)	545, 584, 803, 1344
BfmI	CTRYAG	2 cut(s)	45, 1134
BfoI	RGCGCY	1 cut(s)	1300
BfuI	GTATCC	1 cut(s)	85
BglII	AGATCT	1 cut(s)	775
BisI	GCNGC	5 cut(s)	191, 1062, 1300, 1467, 1542
BlsI	GCNGC	5 cut(s)	192, 1063, 1301, 1468, 1543
Bme1390I	CCNGG	2 cut(s)	89, 1641
Bme18I	GGWCC	1 cut(s)	1693
BmeT110I	CYCGRG	1 cut(s)	601
BmgT120I	GGNCC	3 cut(s)	106, 1477, 1693
BmiI	GGNNCC	5 cut(s)	21, 108, 1018, 1576, 1695
BmrFI	CCNGG	2 cut(s)	89, 1641
BmsI	GCATC	2 cut(s)	1067, 1105
BpiI	GAAGAC	1 cut(s)	293
BpmI	CTGGAG	1 cut(s)	404
Bpu10I	CCTNAGC	1 cut(s)	1272
BsaAI	YACGTR	2 cut(s)	704, 1180
BsaJI	CCNNGG	4 cut(s)	260, 684, 1453, 1640
BsaWI	WCCGGW	2 cut(s)	493, 1810
BsaXI	ACNNNNNCTCC	2 cut(s)	615, 645
Bsc4I	CCNNNNNNNGG	4 cut(s)	200, 1138, 1139, 1726
Bse118I	RCCGGY	2 cut(s)	140, 493
Bse1I	ACTGG	1 cut(s)	387
Bse21I	CCTNAGG	1 cut(s)	1191
BseBI	CCWGG	2 cut(s)	89, 1641
BseDI	CCNNGG	4 cut(s)	260, 684, 1453, 1640
BseGI	GGATG	4 cut(s)	934, 1082, 1102, 1681
BseLI	CCNNNNNNNGG	4 cut(s)	200, 1138, 1139, 1726
BseMII	CTCAG	4 cut(s)	209, 293, 1182, 1263
BseNI	ACTGG	1 cut(s)	387
BseRI	GAGGAG	2 cut(s)	746, 1208
BseSI	GKGCMC	1 cut(s)	1293
BseXI	GCAGC	5 cut(s)	177, 1048, 1286, 1478, 1528
Bsh1236I	CGCG	2 cut(s)	10, 432
BshFI	GGCC	6 cut(s)	43, 107, 409, 1189, 1452, 1478
BshNI	GGYRCC	2 cut(s)	19, 1016
BshTI	ACCGGT	1 cut(s)	493
BsiHKCI	CYCGRG	1 cut(s)	601
BsiSI	CCGG	3 cut(s)	141, 494, 1811
BslI	CCNNNNNNNGG	4 cut(s)	200, 1138, 1139, 1726
BsmAI	GTCTC	4 cut(s)	148, 728, 1204, 1500
BsmBI	CGTCTC	1 cut(s)	1500
BsmI	GAATGC	1 cut(s)	242
BsnI	GGCC	6 cut(s)	43, 107, 409, 1189, 1452, 1478
BsoBI	CYCGRG	1 cut(s)	601
Bsp1286I	GDGCHC	1 cut(s)	1293
Bsp1407I	TGTACA	1 cut(s)	1311
Bsp143I	GATC	7 cut(s)	24, 427, 775, 1426, 1534, 1562, 1612
Bsp19I	CCATGG	1 cut(s)	260
BspACI	CCGC	2 cut(s)	1139, 1748
BspANI	GGCC	6 cut(s)	43, 107, 409, 1189, 1452, 1478
BspCNI	CTCAG	4 cut(s)	210, 292, 1183, 1264
BspFNI	CGCG	2 cut(s)	10, 432
BspHI	TCATGA	2 cut(s)	871, 1332
BspLI	GGNNCC	5 cut(s)	21, 108, 1018, 1576, 1695
BspMAI	CTGCAG	1 cut(s)	49
BspPI	GGATC	1 cut(s)	1529
BspT107I	GGYRCC	2 cut(s)	19, 1016
BsrFI	RCCGGY	2 cut(s)	140, 493
BsrGI	TGTACA	1 cut(s)	1311
BsrI	ACTGG	1 cut(s)	387
BssAI	RCCGGY	2 cut(s)	140, 493
BssECI	CCNNGG	4 cut(s)	260, 684, 1453, 1640
BssMI	GATC	7 cut(s)	24, 427, 775, 1426, 1534, 1562, 1612
BssT1I	CCWWGG	3 cut(s)	260, 684, 1453
Bst2UI	CCWGG	2 cut(s)	89, 1641
Bst4CI	ACNGT	3 cut(s)	1021, 1363, 1556
Bst6I	CTCTTC	4 cut(s)	332, 477, 524, 1406
BstAPI	GCANNNNNTGC	1 cut(s)	190
BstAUI	TGTACA	1 cut(s)	1311
BstBAI	YACGTR	2 cut(s)	704, 1180
BstC8I	GCNNGC	5 cut(s)	6, 41, 45, 142, 1304
BstDEI	CTNAG	4 cut(s)	218, 279, 1191, 1272
BstDSI	CCRYGG	1 cut(s)	260
BstF5I	GGATG	4 cut(s)	934, 1082, 1102, 1681
BstFNI	CGCG	2 cut(s)	10, 432
BstH2I	RGCGCY	1 cut(s)	1300
BstHHI	GCGC	3 cut(s)	10, 434, 1299
BstKTI	GATC	7 cut(s)	27, 430, 778, 1429, 1537, 1565, 1615
BstMAI	GTCTC	4 cut(s)	148, 728, 1204, 1500
BstMBI	GATC	7 cut(s)	24, 427, 775, 1426, 1534, 1562, 1612
BstMWI	GCNNNNNNNGC	7 cut(s)	190, 232, 661, 833, 1195, 1303, 1475
BstNI	CCWGG	2 cut(s)	89, 1641
BstNSI	RCATGY	2 cut(s)	188, 1322
BstSCI	CCNGG	2 cut(s)	87, 1639
BstSFI	CTRYAG	2 cut(s)	45, 1134
BstSLI	GKGCMC	1 cut(s)	1293
BstUI	CGCG	2 cut(s)	10, 432
BstV1I	GCAGC	5 cut(s)	177, 1048, 1286, 1478, 1528
BstV2I	GAAGAC	1 cut(s)	293
BstX2I	RGATCY	1 cut(s)	775
BstXI	CCANNNNNNTGG	1 cut(s)	1366
BstYI	RGATCY	1 cut(s)	775
Bsu36I	CCTNAGG	1 cut(s)	1191
BsuI	GTATCC	1 cut(s)	85
BsuRI	GGCC	6 cut(s)	43, 107, 409, 1189, 1452, 1478
BtgI	CCRYGG	1 cut(s)	260
BtgZI	GCGATG	1 cut(s)	576
BtsCI	GGATG	4 cut(s)	934, 1082, 1102, 1681
BtsI	GCAGTG	2 cut(s)	54, 990
BtsIMutI	CAGTG	3 cut(s)	54, 990, 1098
Cac8I	GCNNGC	5 cut(s)	6, 41, 45, 142, 1304
CciI	TCATGA	2 cut(s)	871, 1332
CfoI	GCGC	3 cut(s)	10, 434, 1299
Cfr10I	RCCGGY	2 cut(s)	140, 493
Cfr13I	GGNCC	3 cut(s)	106, 1477, 1693
Csp6I	GTAC	3 cut(s)	1017, 1312, 1388
CspAI	ACCGGT	1 cut(s)	493
CviQI	GTAC	3 cut(s)	1017, 1312, 1388
DdeI	CTNAG	4 cut(s)	218, 279, 1191, 1272
DpnI	GATC	7 cut(s)	26, 429, 777, 1428, 1536, 1564, 1614
DpnII	GATC	7 cut(s)	24, 427, 775, 1426, 1534, 1562, 1612
DrdI	GACNNNNNNGTC	1 cut(s)	1376
DseDI	GACNNNNNNGTC	1 cut(s)	1376
EaeI	YGGCCR	1 cut(s)	1450
Eam1104I	CTCTTC	4 cut(s)	332, 477, 524, 1406
EarI	CTCTTC	4 cut(s)	332, 477, 524, 1406
Eco130I	CCWWGG	3 cut(s)	260, 684, 1453
Eco32I	GATATC	1 cut(s)	1681
Eco47I	GGWCC	1 cut(s)	1693
Eco47III	AGCGCT	1 cut(s)	1298
Eco57I	CTGAAG	1 cut(s)	432
Eco72I	CACGTG	2 cut(s)	704, 1180
Eco81I	CCTNAGG	1 cut(s)	1191
Eco88I	CYCGRG	1 cut(s)	601
EcoRII	CCWGG	2 cut(s)	87, 1639
EcoRV	GATATC	1 cut(s)	1681
EcoT14I	CCWWGG	3 cut(s)	260, 684, 1453
EcoT22I	ATGCAT	1 cut(s)	244
ErhI	CCWWGG	3 cut(s)	260, 684, 1453
Esp3I	CGTCTC	1 cut(s)	1500
FalI	AAGNNNNNCTT	2 cut(s)	155, 187
FauI	CCCGC	1 cut(s)	1132
FauNDI	CATATG	1 cut(s)	1667
Fnu4HI	GCNGC	5 cut(s)	191, 1062, 1300, 1467, 1542
FokI	GGATG	4 cut(s)	941, 1089, 1109, 1688
Fsp4HI	GCNGC	5 cut(s)	191, 1062, 1300, 1467, 1542
FspBI	CTAG	4 cut(s)	545, 584, 803, 1344
GlaI	GCGC	3 cut(s)	9, 433, 1298
GluI	GCNGC	5 cut(s)	191, 1062, 1300, 1467, 1542
GsuI	CTGGAG	1 cut(s)	404
HaeII	RGCGCY	1 cut(s)	1300
HaeIII	GGCC	6 cut(s)	43, 107, 409, 1189, 1452, 1478
HapII	CCGG	3 cut(s)	141, 494, 1811
HhaI	GCGC	3 cut(s)	10, 434, 1299
Hin6I	GCGC	3 cut(s)	8, 432, 1297
HinP1I	GCGC	3 cut(s)	8, 432, 1297
HincII	GTYRAC	2 cut(s)	132, 1279
HindII	GTYRAC	2 cut(s)	132, 1279
HindIII	AAGCTT	1 cut(s)	653
HinfI	GANTC	3 cut(s)	330, 1105, 1588
HpaII	CCGG	3 cut(s)	141, 494, 1811
HphI	GGTGA	7 cut(s)	551, 622, 988, 1112, 1124, 1154, 1750
Hpy166II	GTNNAC	6 cut(s)	52, 132, 458, 642, 1279, 1390
Hpy188I	TCNGA	6 cut(s)	282, 595, 677, 856, 1209, 1567
Hpy188III	TCNNGA	8 cut(s)	163, 334, 363, 722, 872, 1160, 1333, 1408
Hpy8I	GTNNAC	6 cut(s)	52, 132, 458, 642, 1279, 1390
HpyAV	CCTTC	3 cut(s)	259, 407, 1063
HpyCH4III	ACNGT	3 cut(s)	1021, 1363, 1556
HpyCH4IV	ACGT	2 cut(s)	703, 1179
HpyCH4V	TGCA	8 cut(s)	47, 242, 836, 916, 1064, 1118, 1302, 1441
HpyF10VI	GCNNNNNNNGC	7 cut(s)	190, 232, 661, 833, 1195, 1303, 1475
HpyF3I	CTNAG	4 cut(s)	218, 279, 1191, 1272
HpySE526I	ACGT	2 cut(s)	703, 1179
HspAI	GCGC	3 cut(s)	8, 432, 1297
KpnI	GGTACC	1 cut(s)	1020
KroI	GCCGGC	1 cut(s)	140
KroNI	GCCGGC	1 cut(s)	142
Kzo9I	GATC	7 cut(s)	24, 427, 775, 1426, 1534, 1562, 1612
LmnI	GCTCC	3 cut(s)	558, 1058, 1195
Lsp1109I	GCAGC	5 cut(s)	177, 1048, 1286, 1478, 1528
LweI	GCATC	2 cut(s)	1067, 1105
MaeI	CTAG	4 cut(s)	545, 584, 803, 1344
MaeII	ACGT	2 cut(s)	703, 1179
MaeIII	GTNAC	5 cut(s)	252, 274, 487, 1175, 1495
MalI	GATC	7 cut(s)	26, 429, 777, 1428, 1536, 1564, 1614
MboI	GATC	7 cut(s)	24, 427, 775, 1426, 1534, 1562, 1612
MflI	RGATCY	1 cut(s)	775
MhlI	GDGCHC	1 cut(s)	1293
MlsI	TGGCCA	1 cut(s)	1452
MluNI	TGGCCA	1 cut(s)	1452
MlyI	GAGTC	1 cut(s)	339
MmeI	TCCRAC	3 cut(s)	501, 601, 708
Mox20I	TGGCCA	1 cut(s)	1452
Mph1103I	ATGCAT	1 cut(s)	244
MroNI	GCCGGC	1 cut(s)	140
MroXI	GAANNNNTTC	2 cut(s)	942, 1155
MscI	TGGCCA	1 cut(s)	1452
MseI	TTAA	8 cut(s)	173, 309, 651, 695, 782, 1041, 1752, 1837
MslI	CAYNNNNRTG	3 cut(s)	1126, 1344, 1485
Msp20I	TGGCCA	1 cut(s)	1452
MspI	CCGG	3 cut(s)	141, 494, 1811
MspR9I	CCNGG	2 cut(s)	89, 1641
Mva1269I	GAATGC	1 cut(s)	242
MvaI	CCWGG	2 cut(s)	89, 1641
MvnI	CGCG	2 cut(s)	10, 432
MwoI	GCNNNNNNNGC	7 cut(s)	190, 232, 661, 833, 1195, 1303, 1475
NaeI	GCCGGC	1 cut(s)	142
NcoI	CCATGG	1 cut(s)	260
NdeI	CATATG	1 cut(s)	1667
NdeII	GATC	7 cut(s)	24, 427, 775, 1426, 1534, 1562, 1612
NgoMIV	GCCGGC	1 cut(s)	140
NlaIV	GGNNCC	5 cut(s)	21, 108, 1018, 1576, 1695
NmuCI	GTSAC	2 cut(s)	487, 1175
NsiI	ATGCAT	1 cut(s)	244
NspI	RCATGY	2 cut(s)	188, 1322
PagI	TCATGA	2 cut(s)	871, 1332
PctI	GAATGC	1 cut(s)	242
PdiI	GCCGGC	1 cut(s)	142
PdmI	GAANNNNTTC	2 cut(s)	942, 1155
PfeI	GAWTC	2 cut(s)	1105, 1588
PfoI	TCCNGGA	1 cut(s)	87
PinAI	ACCGGT	1 cut(s)	493
PkrI	GCNGC	5 cut(s)	192, 1063, 1301, 1468, 1543
PleI	GAGTC	1 cut(s)	338
PmaCI	CACGTG	2 cut(s)	704, 1180
PmlI	CACGTG	2 cut(s)	704, 1180
PpsI	GAGTC	1 cut(s)	338
Ppu21I	YACGTR	2 cut(s)	704, 1180
PshBI	ATTAAT	2 cut(s)	695, 1041
Psp6I	CCWGG	2 cut(s)	87, 1639
PspCI	CACGTG	2 cut(s)	704, 1180
PspGI	CCWGG	2 cut(s)	87, 1639
PspN4I	GGNNCC	5 cut(s)	21, 108, 1018, 1576, 1695
PspPI	GGNCC	3 cut(s)	106, 1477, 1693
PstI	CTGCAG	1 cut(s)	49
PsuI	RGATCY	1 cut(s)	775
RsaI	GTAC	3 cut(s)	1018, 1313, 1389
RsaNI	GTAC	3 cut(s)	1017, 1312, 1388
RseI	CAYNNNNRTG	3 cut(s)	1126, 1344, 1485
SaqAI	TTAA	8 cut(s)	173, 309, 651, 695, 782, 1041, 1752, 1837
SatI	GCNGC	5 cut(s)	191, 1062, 1300, 1467, 1542
Sau3AI	GATC	7 cut(s)	24, 427, 775, 1426, 1534, 1562, 1612
Sau96I	GGNCC	3 cut(s)	106, 1477, 1693
SchI	GAGTC	1 cut(s)	339
ScrFI	CCNGG	2 cut(s)	89, 1641
SduI	GDGCHC	1 cut(s)	1293
SfaNI	GCATC	2 cut(s)	1067, 1105
SfcI	CTRYAG	2 cut(s)	45, 1134
SinI	GGWCC	1 cut(s)	1693
SmiMI	CAYNNNNRTG	3 cut(s)	1126, 1344, 1485
SpeI	ACTAGT	1 cut(s)	1343
SsiI	CCGC	2 cut(s)	1139, 1748
SspMI	CTAG	4 cut(s)	545, 584, 803, 1344
StyD4I	CCNGG	2 cut(s)	87, 1639
StyI	CCWWGG	3 cut(s)	260, 684, 1453
TaaI	ACNGT	3 cut(s)	1021, 1363, 1556
TaiI	ACGT	2 cut(s)	706, 1182
TaqI	TCGA	2 cut(s)	1026, 1159
TatI	WGTACW	1 cut(s)	1311
TfiI	GAWTC	2 cut(s)	1105, 1588
Tru1I	TTAA	8 cut(s)	173, 309, 651, 695, 782, 1041, 1752, 1837
Tru9I	TTAA	8 cut(s)	173, 309, 651, 695, 782, 1041, 1752, 1837
TscAI	CASTG	3 cut(s)	54, 990, 1098
TseFI	GTSAC	2 cut(s)	487, 1175
TseI	GCWGC	5 cut(s)	190, 1061, 1299, 1466, 1541
Tsp45I	GTSAC	2 cut(s)	487, 1175
TspDTI	ATGAA	4 cut(s)	528, 860, 1393, 1503
TspGWI	ACGGA	1 cut(s)	627
TspRI	CASTG	3 cut(s)	54, 990, 1098
VpaK11BI	GGWCC	1 cut(s)	1693
VspI	ATTAAT	2 cut(s)	695, 1041
XapI	RAATTY	3 cut(s)	72, 269, 889
XceI	RCATGY	2 cut(s)	188, 1322
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1647
XmnI	GAANNNNTTC	2 cut(s)	942, 1155
XspI	CTAG	4 cut(s)	545, 584, 803, 1344
Zsp2I	ATGCAT	1 cut(s)	244

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.