MD12G1086200.v1.1

UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase-like

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr12
Physical Location & Seq
Forward (+)
10572575 .. 10578974
6400 bp
Loading structure...
UTR
Exon/CDS
Intron
MD12G1086200.v1.1.491

Sequence Viewer

Length: 1272 bp
ATGGTAGCTCGAAAGCGAGCTTCAACAGACTCATCGGCACAAACCAAACCAGACGAGACCGCCGCACGGCCAAAACCCCAAGAACCCACATTAGCAGAGCCGCCGATTGCACCACCAAAGTCAGGCCTAATTCTGAAGCTCGTGCTCTTCTTCTCAGTCCCATACTTTTACCTCCTCTTCTACCACTACAAGATCGAAGCAGAGCTTCGCAAATCGATTCTCATCAATGCTGGTCTCAGCCTTGCCGGGTTCTTCGTCACCGTTAAGATGATCCCCGTCGCTTCCAGATACGTCCTCCGGCGCAATCTCTTTGGCTACGATATTAACAAGAAGGGTACCCCTCAGGGCACTGTCAAAGTGCCTGAGTCACTGGGTATTGTTGTTGGAATTGTCTTCTTGGTCTTGGGAATCTTATTTCAGTATTTTAACTTCACTGCAGATTCAAATTGGCTTGTCGAATACAATGCAGCATTAGCATCCATATGCTTTATGGTATTGCTTGGATTTGTAGATGATGTCCTTGATGTACCTTGGAGGGTGAAATTAGTTCTGCCATCCATTGCAGCTCTACCTCTGCTGATGGCCTATGCTGGACATACAACTATCGTCATACCAAAGCCTCTTGTTCCATATGCTGGGCTAGAGGTTTTGGATCTAGGATGGATTTATAAACTATACATGGGACTTTTGGCGGTTTTTTGTACAAACTCCATAAATATTCATGCTGGCTTGAATGGTCTTGAAGTTGGGCAGACGGTCGTTATTGCAGCTGCTATTTTAATACATAATATCATGCAAATTGGGGCATCTGCAGATTCTGAGTACAAGATGGCACATGCATTCTCTATTTATCTTGTCCAACCCTTACTAGCCACCTCTTTGGGATTGTTCGCTTACAACTGGTATCCTTCTTCAGCTTTTGTTGGAGATACTTACACATATTTTGCTGGAATGACGATGGCTGTAGCTGGGATTTTAGGCCATTTTAGCGAAACACTCCTGATATTCTTTGCACCTCAAGTATTGAACTTTCTCTTGTCAGTGCCCCAGCTTGCTGGAATTGTTCCATGTCCACGGCATCGTTTGCCTAGGTTTGATCCTGAAACTGGACTTCTGACTGGGACAAAGGATGGGACAGTTGTAAACCTTTTTCTAAGACAATTTGGCAGGATGACGGAGAAGTCACTTTGCGTCTCTCTTCTAGTTTTCCAGGCTATGGCATGCTGCTTCTGTTTCCTGCTGAGGTTTTTCCTTGCTGGCTGGTACAAATGA

Protein Analysis

424

Amino Acids

46.68

Weight (kDa)

8.92

Isoelectric Point (pI)

38.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glycos_transf_4 PF00953 157 - 327 5.3e-28 Glycosyl transferase family 4
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 669
AasI GACNNNNNNGTC 1 cut(s) 1180
Acc65I GGTACC 1 cut(s) 335
AccB1I GGYRCC 1 cut(s) 335
AccB7I CCANNNNNTGG 2 cut(s) 635, 1216
AciI CCGC 4 cut(s) 60, 63, 101, 692
AclWI GGATC 3 cut(s) 265, 660, 1091
AcoI YGGCCR 1 cut(s) 68
AcuI CTGAAG 2 cut(s) 155, 897
AfaI GTAC 5 cut(s) 337, 528, 703, 824, 1265
AfiI CCNNNNNNNGG 5 cut(s) 66, 122, 635, 1106, 1216
AgsI TTSAA 5 cut(s) 24, 444, 733, 743, 1027
AjnI CCWGG 1 cut(s) 1209
AluBI AGCT 9 cut(s) 8, 20, 139, 205, 566, 770, 917, 968, 1051
AluI AGCT 9 cut(s) 8, 20, 139, 205, 566, 770, 917, 968, 1051
Alw21I GWGCWC 1 cut(s) 147
Alw26I GTCTC 3 cut(s) 50, 239, 1198
AlwI GGATC 3 cut(s) 265, 660, 1091
AlwNI CAGNNNCTG 1 cut(s) 818
AoxI GGCC 4 cut(s) 68, 124, 582, 979
ApeKI GCWGC 5 cut(s) 467, 563, 767, 770, 1224
Asp718I GGTACC 1 cut(s) 335
AspA2I CCTAGG 1 cut(s) 1088
AspLEI GCGC 1 cut(s) 303
AsuC2I CCSGG 1 cut(s) 247
AsuHPI GGTGA 2 cut(s) 250, 550
AvrII CCTAGG 1 cut(s) 1088
AxyI CCTNAGG 1 cut(s) 342
BaeGI GKGCMC 2 cut(s) 350, 1047
BanI GGYRCC 1 cut(s) 335
BarI GAAGNNNNNNTAC 2 cut(s) 413, 445
BauI CACGAG 1 cut(s) 140
BbsI GAAGAC 1 cut(s) 385
Bbv12I GWGCWC 1 cut(s) 147
BbvCI CCTCAGC 1 cut(s) 1241
BbvI GCAGC 5 cut(s) 479, 575, 757, 779, 1211
BccI CCATC 6 cut(s) 562, 574, 654, 823, 952, 1124
BceAI ACGGC 2 cut(s) 83, 1091
BcgI CGANNNNNNTGC 2 cut(s) 446, 480
BciT130I CCWGG 1 cut(s) 1211
BciVI GTATCC 1 cut(s) 915
BcnI CCSGG 1 cut(s) 247
BcoDI GTCTC 3 cut(s) 50, 239, 1198
BfaI CTAG 5 cut(s) 641, 656, 869, 1089, 1202
BfmI CTRYAG 3 cut(s) 435, 810, 963
BfuI GTATCC 1 cut(s) 915
BisI GCNGC 7 cut(s) 63, 101, 468, 564, 768, 771, 1225
BlnI CCTAGG 1 cut(s) 1088
BlsI GCNGC 7 cut(s) 64, 102, 469, 565, 769, 772, 1226
Bme1390I CCNGG 2 cut(s) 247, 1211
BmiI GGNNCC 1 cut(s) 337
BmrFI CCNGG 2 cut(s) 247, 1211
BmrI ACTGGG 2 cut(s) 380, 1128
BmsI GCATC 3 cut(s) 485, 815, 1087
BmuI ACTGGG 2 cut(s) 380, 1128
BpiI GAAGAC 1 cut(s) 385
Bpu10I CCTNAGC 1 cut(s) 1241
BpuEI CTTGAG 1 cut(s) 1002
BpuMI CCSGG 1 cut(s) 247
Bsa29I ATCGAT 1 cut(s) 215
BsaBI GATNNNNATC 1 cut(s) 221
BsaI GGTCTC 2 cut(s) 50, 239
BsaJI CCNNGG 3 cut(s) 530, 1073, 1088
Bsc4I CCNNNNNNNGG 5 cut(s) 66, 122, 635, 1106, 1216
Bse1I ACTGG 4 cut(s) 375, 905, 1111, 1123
Bse21I CCTNAGG 1 cut(s) 342
Bse3DI GCAATG 1 cut(s) 558
Bse8I GATNNNNATC 1 cut(s) 221
BseBI CCWGG 1 cut(s) 1211
BseCI ATCGAT 1 cut(s) 215
BseDI CCNNGG 3 cut(s) 530, 1073, 1088
BseGI GGATG 5 cut(s) 476, 554, 665, 1135, 1176
BseJI GATNNNNATC 1 cut(s) 221
BseLI CCNNNNNNNGG 5 cut(s) 66, 122, 635, 1106, 1216
BseMI GCAATG 1 cut(s) 558
BseMII CTCAG 6 cut(s) 168, 250, 354, 356, 810, 1232
BseNI ACTGG 4 cut(s) 375, 905, 1111, 1123
BseRI GAGGAG 1 cut(s) 164
BseSI GKGCMC 2 cut(s) 350, 1047
BseXI GCAGC 5 cut(s) 479, 575, 757, 779, 1211
BseYI CCCAGC 3 cut(s) 635, 968, 1047
Bsh1285I CGRYCG 1 cut(s) 759
BshFI GGCC 4 cut(s) 70, 126, 584, 981
BshNI GGYRCC 1 cut(s) 335
BshVI ATCGAT 1 cut(s) 215
BsiEI CGRYCG 1 cut(s) 759
BsiHKAI GWGCWC 1 cut(s) 147
BsiSI CCGG 2 cut(s) 246, 298
BslFI GGGAC 4 cut(s) 143, 696, 1135, 1147
BslI CCNNNNNNNGG 5 cut(s) 66, 122, 635, 1106, 1216
BsmAI GTCTC 3 cut(s) 50, 239, 1198
BsmBI CGTCTC 1 cut(s) 1198
BsmFI GGGAC 4 cut(s) 143, 696, 1135, 1147
BsmI GAATGC 1 cut(s) 839
BsnI GGCC 4 cut(s) 70, 126, 584, 981
Bso31I GGTCTC 2 cut(s) 50, 239
Bsp1286I GDGCHC 3 cut(s) 147, 350, 1047
Bsp1407I TGTACA 1 cut(s) 701
Bsp143I GATC 4 cut(s) 192, 270, 652, 1096
BspACI CCGC 4 cut(s) 60, 63, 101, 692
BspANI GGCC 4 cut(s) 70, 126, 584, 981
BspCNI CTCAG 6 cut(s) 167, 249, 355, 355, 811, 1233
BspDI ATCGAT 1 cut(s) 215
BspLI GGNNCC 1 cut(s) 337
BspMAI CTGCAG 2 cut(s) 439, 814
BspPI GGATC 3 cut(s) 265, 660, 1091
BspQI GCTCTTC 1 cut(s) 152
BspT107I GGYRCC 1 cut(s) 335
BspTNI GGTCTC 2 cut(s) 50, 239
BsrDI GCAATG 1 cut(s) 558
BsrGI TGTACA 1 cut(s) 701
BsrI ACTGG 4 cut(s) 375, 905, 1111, 1123
BssECI CCNNGG 3 cut(s) 530, 1073, 1088
BssMI GATC 4 cut(s) 192, 270, 652, 1096
BssSI CACGAG 1 cut(s) 140
BssT1I CCWWGG 2 cut(s) 530, 1088
Bst2BI CACGAG 1 cut(s) 140
Bst2UI CCWGG 1 cut(s) 1211
Bst4CI ACNGT 4 cut(s) 262, 352, 757, 1138
Bst6I CTCTTC 3 cut(s) 152, 182, 1203
BstAPI GCANNNNNTGC 1 cut(s) 1084
BstAUI TGTACA 1 cut(s) 701
BstC8I GCNNGC 5 cut(s) 18, 727, 1053, 1222, 1258
BstDEI CTNAG 7 cut(s) 154, 236, 342, 363, 819, 1154, 1241
BstDSI CCRYGG 1 cut(s) 1073
BstF5I GGATG 5 cut(s) 476, 554, 665, 1135, 1176
BstHHI GCGC 1 cut(s) 303
BstKTI GATC 4 cut(s) 195, 273, 655, 1099
BstMAI GTCTC 3 cut(s) 50, 239, 1198
BstMBI GATC 4 cut(s) 192, 270, 652, 1096
BstMCI CGRYCG 1 cut(s) 759
BstMWI GCNNNNNNNGC 3 cut(s) 473, 987, 1084
BstNI CCWGG 1 cut(s) 1211
BstNSI RCATGY 2 cut(s) 839, 1224
BstSCI CCNGG 2 cut(s) 245, 1209
BstSFI CTRYAG 3 cut(s) 435, 810, 963
BstSLI GKGCMC 2 cut(s) 350, 1047
BstV1I GCAGC 5 cut(s) 479, 575, 757, 779, 1211
BstV2I GAAGAC 1 cut(s) 385
BstX2I RGATCY 1 cut(s) 652
BstXI CCANNNNNNTGG 2 cut(s) 880, 1055
BstYI RGATCY 1 cut(s) 652
Bsu15I ATCGAT 1 cut(s) 215
Bsu36I CCTNAGG 1 cut(s) 342
BsuI GTATCC 1 cut(s) 915
BsuRI GGCC 4 cut(s) 70, 126, 584, 981
BsuTUI ATCGAT 1 cut(s) 215
BtgI CCRYGG 1 cut(s) 1073
BtsCI GGATG 5 cut(s) 476, 554, 665, 1135, 1176
BtsI GCAGTG 1 cut(s) 432
BtsIMutI CAGTG 4 cut(s) 348, 368, 432, 1047
Cac8I GCNNGC 5 cut(s) 18, 727, 1053, 1222, 1258
CaiI CAGNNNCTG 1 cut(s) 818
CfoI GCGC 1 cut(s) 303
ClaI ATCGAT 1 cut(s) 215
CseI GACGC 1 cut(s) 1180
Csp6I GTAC 5 cut(s) 336, 527, 702, 823, 1264
CviAII CATG 6 cut(s) 679, 722, 793, 836, 1068, 1221
CviQI GTAC 5 cut(s) 336, 527, 702, 823, 1264
DdeI CTNAG 7 cut(s) 154, 236, 342, 363, 819, 1154, 1241
DpnI GATC 4 cut(s) 194, 272, 654, 1098
DpnII GATC 4 cut(s) 192, 270, 652, 1096
DrdI GACNNNNNNGTC 1 cut(s) 1180
DseDI GACNNNNNNGTC 1 cut(s) 1180
EaeI YGGCCR 1 cut(s) 68
Eam1104I CTCTTC 3 cut(s) 152, 182, 1203
EarI CTCTTC 3 cut(s) 152, 182, 1203
Eco130I CCWWGG 2 cut(s) 530, 1088
Eco147I AGGCCT 1 cut(s) 126
Eco31I GGTCTC 2 cut(s) 50, 239
Eco57I CTGAAG 2 cut(s) 155, 897
Eco81I CCTNAGG 1 cut(s) 342
EcoRII CCWGG 1 cut(s) 1209
EcoT14I CCWWGG 2 cut(s) 530, 1088
EcoT22I ATGCAT 1 cut(s) 841
ErhI CCWWGG 2 cut(s) 530, 1088
Esp3I CGTCTC 1 cut(s) 1198
FaeI CATG 6 cut(s) 682, 725, 796, 839, 1071, 1224
FalI AAGNNNNNCTT 2 cut(s) 189, 221
FaqI GGGAC 4 cut(s) 143, 696, 1135, 1147
FatI CATG 6 cut(s) 678, 721, 792, 835, 1067, 1220
FauNDI CATATG 2 cut(s) 482, 631
Fnu4HI GCNGC 7 cut(s) 63, 101, 468, 564, 768, 771, 1225
FokI GGATG 5 cut(s) 463, 541, 672, 1142, 1183
Fsp4HI GCNGC 7 cut(s) 63, 101, 468, 564, 768, 771, 1225
FspBI CTAG 5 cut(s) 641, 656, 869, 1089, 1202
GlaI GCGC 1 cut(s) 302
GluI GCNGC 7 cut(s) 63, 101, 468, 564, 768, 771, 1225
GsaI CCCAGC 3 cut(s) 639, 972, 1051
HaeIII GGCC 4 cut(s) 70, 126, 584, 981
HapII CCGG 2 cut(s) 246, 298
HgaI GACGC 1 cut(s) 1180
HhaI GCGC 1 cut(s) 303
Hin1II CATG 6 cut(s) 682, 725, 796, 839, 1071, 1224
Hin6I GCGC 1 cut(s) 301
HinP1I GCGC 1 cut(s) 301
HinfI GANTC 6 cut(s) 29, 217, 365, 408, 440, 815
HpaII CCGG 2 cut(s) 246, 298
HphI GGTGA 2 cut(s) 250, 550
Hpy166II GTNNAC 2 cut(s) 1073, 1144
Hpy188I TCNGA 3 cut(s) 135, 820, 1116
Hpy188III TCNNGA 4 cut(s) 285, 740, 1000, 1100
Hpy8I GTNNAC 2 cut(s) 1073, 1144
Hpy99I CGWCG 1 cut(s) 281
HpyAV CCTTC 2 cut(s) 325, 918
HpyCH4III ACNGT 4 cut(s) 262, 352, 757, 1138
HpyCH4IV ACGT 1 cut(s) 291
HpyCH4V TGCA 9 cut(s) 110, 437, 467, 563, 767, 796, 812, 839, 1013
HpyF10VI GCNNNNNNNGC 3 cut(s) 473, 987, 1084
HpyF3I CTNAG 7 cut(s) 154, 236, 342, 363, 819, 1154, 1241
HpySE526I ACGT 1 cut(s) 291
Hsp92II CATG 6 cut(s) 682, 725, 796, 839, 1071, 1224
HspAI GCGC 1 cut(s) 301
KpnI GGTACC 1 cut(s) 339
Kzo9I GATC 4 cut(s) 192, 270, 652, 1096
LguI GCTCTTC 1 cut(s) 152
Lsp1109I GCAGC 5 cut(s) 479, 575, 757, 779, 1211
LweI GCATC 3 cut(s) 485, 815, 1087
MaeI CTAG 5 cut(s) 641, 656, 869, 1089, 1202
MaeII ACGT 1 cut(s) 291
MaeIII GTNAC 3 cut(s) 256, 366, 1182
MalI GATC 4 cut(s) 194, 272, 654, 1098
MboI GATC 4 cut(s) 192, 270, 652, 1096
MboII GAAGA 7 cut(s) 139, 142, 169, 244, 385, 903, 1190
MflI RGATCY 1 cut(s) 652
MhlI GDGCHC 3 cut(s) 147, 350, 1047
MluCI AATT 7 cut(s) 129, 387, 445, 542, 798, 1059, 1160
MlyI GAGTC 2 cut(s) 23, 374
MmeI TCCRAC 3 cut(s) 364, 883, 904
Mph1103I ATGCAT 1 cut(s) 841
MseI TTAA 4 cut(s) 264, 324, 426, 779
MslI CAYNNNNRTG 1 cut(s) 481
MspA1I CMGCKG 1 cut(s) 770
MspI CCGG 2 cut(s) 246, 298
MspR9I CCNGG 2 cut(s) 247, 1211
Mva1269I GAATGC 1 cut(s) 839
MvaI CCWGG 1 cut(s) 1211
MwoI GCNNNNNNNGC 3 cut(s) 473, 987, 1084
NciI CCSGG 1 cut(s) 247
NdeI CATATG 2 cut(s) 482, 631
NdeII GATC 4 cut(s) 192, 270, 652, 1096
NlaIII CATG 6 cut(s) 682, 725, 796, 839, 1071, 1224
NlaIV GGNNCC 1 cut(s) 337
NmuCI GTSAC 3 cut(s) 256, 366, 1182
NsiI ATGCAT 1 cut(s) 841
NspI RCATGY 2 cut(s) 839, 1224
PaeI GCATGC 1 cut(s) 1224
PceI AGGCCT 1 cut(s) 126
PciSI GCTCTTC 1 cut(s) 152
PctI GAATGC 1 cut(s) 839
PfeI GAWTC 4 cut(s) 217, 408, 440, 815
PflMI CCANNNNNTGG 2 cut(s) 635, 1216
PkrI GCNGC 7 cut(s) 64, 102, 469, 565, 769, 772, 1226
PleI GAGTC 2 cut(s) 23, 373
PpsI GAGTC 2 cut(s) 23, 373
PsiI TTATAA 1 cut(s) 669
Psp6I CCWGG 1 cut(s) 1209
PspFI CCCAGC 3 cut(s) 635, 968, 1047
PspGI CCWGG 1 cut(s) 1209
PspN4I GGNNCC 1 cut(s) 337
PstI CTGCAG 2 cut(s) 439, 814
PstNI CAGNNNCTG 1 cut(s) 818
PsuI RGATCY 1 cut(s) 652
PvuII CAGCTG 1 cut(s) 770
RsaI GTAC 5 cut(s) 337, 528, 703, 824, 1265
RsaNI GTAC 5 cut(s) 336, 527, 702, 823, 1264
RseI CAYNNNNRTG 1 cut(s) 481
SapI GCTCTTC 1 cut(s) 152
SaqAI TTAA 4 cut(s) 264, 324, 426, 779
SatI GCNGC 7 cut(s) 63, 101, 468, 564, 768, 771, 1225
Sau3AI GATC 4 cut(s) 192, 270, 652, 1096
SchI GAGTC 2 cut(s) 23, 374
ScrFI CCNGG 2 cut(s) 247, 1211
SduI GDGCHC 3 cut(s) 147, 350, 1047
SfaNI GCATC 3 cut(s) 485, 815, 1087
SfcI CTRYAG 3 cut(s) 435, 810, 963
SmiMI CAYNNNNRTG 1 cut(s) 481
SmlI CTYRAG 1 cut(s) 1017
SmoI CTYRAG 1 cut(s) 1017
SphI GCATGC 1 cut(s) 1224
Sse9I AATT 7 cut(s) 129, 387, 445, 542, 798, 1059, 1160
SseBI AGGCCT 1 cut(s) 126
SsiI CCGC 4 cut(s) 60, 63, 101, 692
SspI AATATT 1 cut(s) 718
SspMI CTAG 5 cut(s) 641, 656, 869, 1089, 1202
StuI AGGCCT 1 cut(s) 126
StyD4I CCNGG 2 cut(s) 245, 1209
StyI CCWWGG 2 cut(s) 530, 1088
TaaI ACNGT 4 cut(s) 262, 352, 757, 1138
TaiI ACGT 1 cut(s) 294
TaqI TCGA 4 cut(s) 10, 195, 215, 456
TasI AATT 7 cut(s) 129, 387, 445, 542, 798, 1059, 1160
TatI WGTACW 2 cut(s) 701, 822
TauI GCSGC 2 cut(s) 65, 103
TfiI GAWTC 4 cut(s) 217, 408, 440, 815
Tru1I TTAA 4 cut(s) 264, 324, 426, 779
Tru9I TTAA 4 cut(s) 264, 324, 426, 779
TscAI CASTG 4 cut(s) 355, 375, 439, 1047
TseFI GTSAC 3 cut(s) 256, 366, 1182
TseI GCWGC 5 cut(s) 467, 563, 767, 770, 1224
Tsp45I GTSAC 3 cut(s) 256, 366, 1182
TspDTI ATGAA 1 cut(s) 710
TspGWI ACGGA 1 cut(s) 1190
TspRI CASTG 4 cut(s) 355, 375, 439, 1047
Van91I CCANNNNNTGG 2 cut(s) 635, 1216
XceI RCATGY 2 cut(s) 839, 1224
XcmI CCANNNNNNNNNTGG 1 cut(s) 487
XmaJI CCTAGG 1 cut(s) 1088
XspI CTAG 5 cut(s) 641, 656, 869, 1089, 1202
Zsp2I ATGCAT 1 cut(s) 841
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.