Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0004187

Physical Location & Seq

Genomic Coordinates Reverse (-)

18841905 .. 18846987

Gene Structure 5083 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0211000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1428 bp

ATGTCCGGCTGCGCTCGAGCTCCCAACCGACAACCAGGGCCGCCGCCGCCGCCGGCAACCGGAGGCGGCAGCCAGATCGTGCCGCCGATGAGGCGCCACCTAGTGTTCGAGTCGAATAAGCCGCCGTTTTTTCCTCCGGCTGATTATCATCAATTTTCCGGGGGAGCTCAGAGGCCGGCGGACCAGGAGCCGGAAGCTATTGTTGTTCGATCTCCGCAATTTATAAGGAAGGGTGCAGTGGACAACAATGAAGCGGAGAACAACGATTGGACTAGCAGTCCAGGATATAATAATATGATTCAAAGTCCCCTTCAAACTCCTGTGTCTACTACAAAAGCAGGAAAGACAAACAATAGAACAAAGGCTTCAAGGGGCAAATCTGGGCCTCAGACACCTGCGTCAAATGCTGGTTCTCCTTGTCCTCTTACTCCAGCTGGCAGCTGTCGTTTTGACAGTTCTCTAGGTCTATTGACAAAAAAATTCATCAATTTGATTAAGCAAGCAGAAGATGGAATCCTTGATCTAAACAAAGCAGCAGAAACTTTAGAGGTGCAGAAGAGGCGGATATATGACATCACAAATGTCTTGGAAGGCATAGGTCTCATAGAAAAGAAGCTCAAGAACAGAATACGTTGGAAGGGATTTGATGCTTCAAGGCCAGGAGATCTGGATGCTGATCTCTCTATATTACAGGGAGAAGTGGAAAACCTATCTTTAAAAGAGCGCAGCTTAGATGACCGAATAAGAGAGATGGAAGAAAAGTTGAGGGATTTAAGTGGAGATGAAAACAACCGAAAGTGGCTTTTTGTGACTGAAGAAGACATTAAGGGCCTACCGTGCTTCCAGAATGAAACCCTGATAGCAATTAAAGCTCCACATGGAACCACCTTGGAAGTCCCAGATCCCGATGAAGCTGTCGACTATCCACAACGGAGATACAGGATAATACTTAGAAGCACAATGGGACCCATTGACGTGTACCTTGTCAGTCAATTTGAGGAGAAGTTTGATGACATCAATGGAGTTGAGCCACCTGTTAGCTTCCCAATTGCTTCTGGTTCTGGCTCTAATGAGCAATCAACAACAGAAATGGTCAATGGACAAAACAGAGGAAAGGAAATTGATCCTAGGGCGCAACAAGCTCAAGTTGATCAGACGTGCTCTGATGTAAATGCTTCTCAGGAGTTTGGTGGGGGAATGATGAGGATTGTTCCTTCTGATGTTGATAATGATGCAGACTACTGGCTTTTGTCTGGTGTTGATGTTAGCATTACGGATATGTGGAGAACAGACTCTATTGAATGGAATGGGGAAGACATGCTTAATGCTGATTTTGGACTGCCCGATGTAAGTACCCCAAGGCCACAAACACCACCATCTGGAATTGTTGAAGTTCCATCTCATGCTGTTAACTTTTCCCAAAGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003975 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0006464 GO:0006486 GO:0006487 GO:0006488 GO:0006489 GO:0006490 GO:0006629 GO:0006644 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0008610 GO:0008654 GO:0009058 GO:0009059 GO:0009100 GO:0009101 GO:0009987 GO:0012505 GO:0016020 GO:0016021 GO:0016740 GO:0016772 GO:0016780 GO:0019538 GO:0019637 GO:0031224 GO:0031984 GO:0034645 GO:0036211 GO:0042175 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043413 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0046465 GO:0070085 GO:0071704 GO:0090407 GO:0098827 GO:1901135 GO:1901137 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00510 ko01100 map00510 map01100

Pfam Domains

Protein Families

Glycos_transf_4

Protein Analysis

475

Amino Acids

52.28

Weight (kDa)

4.92

Isoelectric Point (pI)

50.22

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WHD_E2F_TDP	PF02319	151 - 214	1.8e-27	E2F/DP family winged-helix DNA-binding domain
E2F_CC-MB	PF16421	230 - 330	1e-33	E2F transcription factor CC-MB domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004187)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G07830
fragaria_vesca	FvH4_5g16620
malus_domestica	MD06G1178500.v1.1 MD14G1184900.v1.1
prunus_persica	Prupe.5G177600_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0130991 RchiOBHm_Chr3g0484341 RchiOBHm_Chr3g0484351 RchiOBHm_Chr3g0484411 RchiOBHm_Chr7g0179521 RchiOBHm_Chr7g0240791
rosa_laevigata	RLG00000005345
rosa_multiflora	Rmu_sc0007821.1_g000005
rosa_roxburghii	Rroxscaffold_2G00113410 Rroxscaffold_3G00273790 Rroxscaffold_6G00397760
rosa_rugosa	Rorug02G0294400 Rorug03G0211000 Rorug06G0425100.1 Rorug06G0425200.1
rosa_samantha	Rh2AG345800 Rh2BG353900 Rh2CG332400 Rh2DG372000 Rh3BG296700 Rh6AG067700 Rh7AG025100 Rh7BG024600 Rh7CG025700 Rh7DG025800
rosa_wichuraiana	Rw0G018990 Rw3G023460 Rw7G002010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	224
AarI	CACCTGC	1 cut(s)	403
AasI	GACNNNNNNGTC	1 cut(s)	397
Acc36I	ACCTGC	1 cut(s)	403
AccB1I	GGYRCC	1 cut(s)	93
AccB7I	CCANNNNNTGG	1 cut(s)	1379
AccI	GTMKAC	2 cut(s)	326, 918
AclWI	GGATC	2 cut(s)	896, 1118
AcsI	RAATTY	1 cut(s)	479
AcuI	CTGAAG	1 cut(s)	834
AcyI	GRCGYC	1 cut(s)	94
AdeI	CACNNNGTG	1 cut(s)	103
AfaI	GTAC	2 cut(s)	980, 1354
AfiI	CCNNNNNNNGG	3 cut(s)	59, 190, 1379
AflIII	ACRYGT	1 cut(s)	975
AgsI	TTSAA	6 cut(s)	302, 314, 369, 654, 1301, 1391
AhdI	GACNNNNNGTC	1 cut(s)	276
AjiI	CACGTC	2 cut(s)	976, 1158
AjnI	CCWGG	4 cut(s)	34, 183, 280, 658
Alw21I	GWGCWC	3 cut(s)	22, 169, 1163
Alw26I	GTCTC	1 cut(s)	605
AlwI	GGATC	2 cut(s)	896, 1118
Ama87I	CYCGRG	1 cut(s)	15
AoxI	GGCC	6 cut(s)	38, 173, 383, 656, 829, 1361
ApeKI	GCWGC	5 cut(s)	9, 69, 438, 533, 726
ApoI	RAATTY	1 cut(s)	479
AspA2I	CCTAGG	1 cut(s)	1127
AspLEI	GCGC	4 cut(s)	14, 96, 726, 1135
AspS9I	GGNCC	5 cut(s)	38, 181, 383, 829, 965
AsuC2I	CCSGG	1 cut(s)	160
AvaI	CYCGRG	1 cut(s)	15
AvaII	GGWCC	2 cut(s)	181, 965
AvrII	CCTAGG	1 cut(s)	1127
BanI	GGYRCC	1 cut(s)	93
BanII	GRGCYC	2 cut(s)	22, 169
BbsI	GAAGAC	2 cut(s)	825, 1320
Bbv12I	GWGCWC	3 cut(s)	22, 169, 1163
BbvI	GCAGC	4 cut(s)	81, 450, 545, 738
BccI	CCATC	4 cut(s)	503, 745, 1384, 1405
BceAI	ACGGC	1 cut(s)	109
BcgI	CGANNNNNNTGC	2 cut(s)	58, 92
BciT130I	CCWGG	4 cut(s)	36, 185, 282, 660
BclI	TGATCA	1 cut(s)	1150
BcnI	CCSGG	1 cut(s)	160
BcoDI	GTCTC	1 cut(s)	605
BfaI	CTAG	4 cut(s)	101, 273, 461, 1128
BfoI	RGCGCY	1 cut(s)	97
BfuAI	ACCTGC	1 cut(s)	403
BglI	GCCNNNNNGGC	1 cut(s)	91
BglII	AGATCT	1 cut(s)	664
BlnI	CCTAGG	1 cut(s)	1127
Bme1390I	CCNGG	5 cut(s)	36, 160, 185, 282, 660
Bme18I	GGWCC	2 cut(s)	181, 965
BmeRI	GACNNNNNGTC	1 cut(s)	276
BmeT110I	CYCGRG	1 cut(s)	15
BmgBI	CACGTC	2 cut(s)	976, 1158
BmgT120I	GGNCC	5 cut(s)	38, 181, 383, 829, 965
BmiI	GGNNCC	5 cut(s)	95, 189, 883, 966, 967
BmrFI	CCNGG	5 cut(s)	36, 160, 185, 282, 660
BmsI	GCATC	3 cut(s)	637, 661, 1222
BpiI	GAAGAC	2 cut(s)	825, 1320
BpmI	CTGGAG	1 cut(s)	414
BpuEI	CTTGAG	2 cut(s)	602, 1128
BpuMI	CCSGG	1 cut(s)	160
BsaBI	GATNNNNATC	2 cut(s)	147, 675
BsaHI	GRCGYC	1 cut(s)	94
BsaI	GGTCTC	1 cut(s)	605
BsaJI	CCNNGG	5 cut(s)	35, 159, 888, 1127, 1358
BsaWI	WCCGGW	1 cut(s)	59
Bsc4I	CCNNNNNNNGG	3 cut(s)	59, 190, 1379
Bse118I	RCCGGY	2 cut(s)	52, 175
Bse1I	ACTGG	1 cut(s)	1247
Bse8I	GATNNNNATC	2 cut(s)	147, 675
BseBI	CCWGG	4 cut(s)	36, 185, 282, 660
BseDI	CCNNGG	5 cut(s)	35, 159, 888, 1127, 1358
BseGI	GGATG	1 cut(s)	676
BseJI	GATNNNNATC	2 cut(s)	147, 675
BseLI	CCNNNNNNNGG	3 cut(s)	59, 190, 1379
BseMII	CTCAG	3 cut(s)	182, 401, 1193
BseNI	ACTGG	1 cut(s)	1247
BseRI	GAGGAG	1 cut(s)	1013
BseXI	GCAGC	4 cut(s)	81, 450, 545, 738
BsgI	GTGCAG	2 cut(s)	255, 572
BshFI	GGCC	6 cut(s)	40, 175, 385, 658, 831, 1363
BshNI	GGYRCC	1 cut(s)	93
BsiHKAI	GWGCWC	3 cut(s)	22, 169, 1163
BsiHKCI	CYCGRG	1 cut(s)	15
BsiSI	CCGG	7 cut(s)	6, 53, 60, 137, 159, 176, 191
BslFI	GGGAC	3 cut(s)	291, 881, 978
BslI	CCNNNNNNNGG	3 cut(s)	59, 190, 1379
BsmAI	GTCTC	1 cut(s)	605
BsmFI	GGGAC	3 cut(s)	291, 881, 978
BsnI	GGCC	6 cut(s)	40, 175, 385, 658, 831, 1363
Bso31I	GGTCTC	1 cut(s)	605
BsoBI	CYCGRG	1 cut(s)	15
Bsp1286I	GDGCHC	3 cut(s)	22, 169, 1163
Bsp143I	GATC	8 cut(s)	75, 209, 520, 664, 676, 901, 1123, 1150
BspANI	GGCC	6 cut(s)	40, 175, 385, 658, 831, 1363
BspCNI	CTCAG	3 cut(s)	181, 400, 1192
BspLI	GGNNCC	5 cut(s)	95, 189, 883, 966, 967
BspMI	ACCTGC	1 cut(s)	403
BspPI	GGATC	2 cut(s)	896, 1118
BspT107I	GGYRCC	1 cut(s)	93
BspTNI	GGTCTC	1 cut(s)	605
BsrFI	RCCGGY	2 cut(s)	52, 175
BsrI	ACTGG	1 cut(s)	1247
BssAI	RCCGGY	2 cut(s)	52, 175
BssECI	CCNNGG	5 cut(s)	35, 159, 888, 1127, 1358
BssMI	GATC	8 cut(s)	75, 209, 520, 664, 676, 901, 1123, 1150
BssNI	GRCGYC	1 cut(s)	94
BssT1I	CCWWGG	3 cut(s)	888, 1127, 1358
Bst2UI	CCWGG	4 cut(s)	36, 185, 282, 660
Bst4CI	ACNGT	2 cut(s)	455, 837
Bst6I	CTCTTC	1 cut(s)	551
BstACI	GRCGYC	1 cut(s)	94
BstC8I	GCNNGC	4 cut(s)	54, 177, 436, 501
BstDEI	CTNAG	5 cut(s)	168, 387, 730, 950, 1179
BstF5I	GGATG	1 cut(s)	676
BstH2I	RGCGCY	1 cut(s)	97
BstHHI	GCGC	4 cut(s)	14, 96, 726, 1135
BstKTI	GATC	8 cut(s)	78, 212, 523, 667, 679, 904, 1126, 1153
BstMAI	GTCTC	1 cut(s)	605
BstMBI	GATC	8 cut(s)	75, 209, 520, 664, 676, 901, 1123, 1150
BstMWI	GCNNNNNNNGC	8 cut(s)	46, 49, 91, 404, 559, 837, 869, 1139
BstNI	CCWGG	4 cut(s)	36, 185, 282, 660
BstNSI	RCATGY	1 cut(s)	1321
BstSCI	CCNGG	5 cut(s)	34, 158, 183, 280, 658
BstV1I	GCAGC	4 cut(s)	81, 450, 545, 738
BstV2I	GAAGAC	2 cut(s)	825, 1320
BstX2I	RGATCY	2 cut(s)	664, 901
BstYI	RGATCY	2 cut(s)	664, 901
BsuRI	GGCC	6 cut(s)	40, 175, 385, 658, 831, 1363
BtrI	CACGTC	2 cut(s)	976, 1158
BtsCI	GGATG	1 cut(s)	676
BtsI	GCAGTG	1 cut(s)	243
BtsIMutI	CAGTG	1 cut(s)	243
BveI	ACCTGC	1 cut(s)	403
Cac8I	GCNNGC	4 cut(s)	54, 177, 436, 501
CfoI	GCGC	4 cut(s)	14, 96, 726, 1135
Cfr10I	RCCGGY	2 cut(s)	52, 175
Cfr13I	GGNCC	5 cut(s)	38, 181, 383, 829, 965
CseI	GACGC	1 cut(s)	387
Csp6I	GTAC	2 cut(s)	979, 1353
CviAII	CATG	3 cut(s)	878, 1318, 1403
CviQI	GTAC	2 cut(s)	979, 1353
DdeI	CTNAG	5 cut(s)	168, 387, 730, 950, 1179
DinI	GGCGCC	1 cut(s)	95
DpnI	GATC	8 cut(s)	77, 211, 522, 666, 678, 903, 1125, 1152
DpnII	GATC	8 cut(s)	75, 209, 520, 664, 676, 901, 1123, 1150
DraI	TTTAAA	1 cut(s)	717
DraIII	CACNNNGTG	1 cut(s)	103
DrdI	GACNNNNNNGTC	1 cut(s)	397
DriI	GACNNNNNGTC	1 cut(s)	276
DseDI	GACNNNNNNGTC	1 cut(s)	397
Eam1104I	CTCTTC	1 cut(s)	551
Eam1105I	GACNNNNNGTC	1 cut(s)	276
EarI	CTCTTC	1 cut(s)	551
EciI	GGCGGA	2 cut(s)	194, 577
Ecl136II	GAGCTC	2 cut(s)	20, 167
Eco130I	CCWWGG	3 cut(s)	888, 1127, 1358
Eco24I	GRGCYC	2 cut(s)	22, 169
Eco31I	GGTCTC	1 cut(s)	605
Eco47I	GGWCC	2 cut(s)	181, 965
Eco53kI	GAGCTC	2 cut(s)	20, 167
Eco57I	CTGAAG	1 cut(s)	834
Eco88I	CYCGRG	1 cut(s)	15
EcoICRI	GAGCTC	2 cut(s)	20, 167
EcoO109I	RGGNCCY	2 cut(s)	829, 965
EcoRII	CCWGG	4 cut(s)	34, 183, 280, 658
EcoT14I	CCWWGG	3 cut(s)	888, 1127, 1358
EcoT38I	GRGCYC	2 cut(s)	22, 169
EgeI	GGCGCC	1 cut(s)	95
EheI	GGCGCC	1 cut(s)	95
ErhI	CCWWGG	3 cut(s)	888, 1127, 1358
FaeI	CATG	3 cut(s)	881, 1321, 1406
FalI	AAGNNNNNCTT	2 cut(s)	1305, 1337
FaqI	GGGAC	3 cut(s)	291, 881, 978
FatI	CATG	3 cut(s)	877, 1317, 1402
FbaI	TGATCA	1 cut(s)	1150
FblI	GTMKAC	2 cut(s)	326, 918
FokI	GGATG	1 cut(s)	683
FriOI	GRGCYC	2 cut(s)	22, 169
FspBI	CTAG	4 cut(s)	101, 273, 461, 1128
GlaI	GCGC	4 cut(s)	13, 95, 725, 1134
GsuI	CTGGAG	1 cut(s)	414
HaeII	RGCGCY	1 cut(s)	97
HaeIII	GGCC	6 cut(s)	40, 175, 385, 658, 831, 1363
HapII	CCGG	7 cut(s)	6, 53, 60, 137, 159, 176, 191
HgaI	GACGC	1 cut(s)	387
HhaI	GCGC	4 cut(s)	14, 96, 726, 1135
Hin1I	GRCGYC	1 cut(s)	94
Hin1II	CATG	3 cut(s)	881, 1321, 1406
Hin6I	GCGC	4 cut(s)	12, 94, 724, 1133
HinP1I	GCGC	4 cut(s)	12, 94, 724, 1133
HincII	GTYRAC	2 cut(s)	919, 1411
HindII	GTYRAC	2 cut(s)	919, 1411
HinfI	GANTC	4 cut(s)	110, 298, 513, 1292
HpaI	GTTAAC	1 cut(s)	1411
HpaII	CCGG	7 cut(s)	6, 53, 60, 137, 159, 176, 191
Hpy166II	GTNNAC	5 cut(s)	241, 327, 919, 979, 1411
Hpy188I	TCNGA	5 cut(s)	171, 390, 1155, 1165, 1219
Hpy188III	TCNNGA	6 cut(s)	619, 668, 844, 905, 1181, 1380
Hpy8I	GTNNAC	5 cut(s)	241, 327, 919, 979, 1411
HpyAV	CCTTC	5 cut(s)	223, 320, 584, 631, 1224
HpyCH4III	ACNGT	2 cut(s)	455, 837
HpyCH4IV	ACGT	3 cut(s)	631, 975, 1157
HpyCH4V	TGCA	3 cut(s)	236, 553, 1235
HpyF10VI	GCNNNNNNNGC	8 cut(s)	46, 49, 91, 404, 559, 837, 869, 1139
HpyF3I	CTNAG	5 cut(s)	168, 387, 730, 950, 1179
HpySE526I	ACGT	3 cut(s)	631, 975, 1157
Hsp92I	GRCGYC	1 cut(s)	94
Hsp92II	CATG	3 cut(s)	881, 1321, 1406
HspAI	GCGC	4 cut(s)	12, 94, 724, 1133
KasI	GGCGCC	1 cut(s)	93
KflI	GGGWCCC	1 cut(s)	965
KroI	GCCGGC	2 cut(s)	52, 175
KroNI	GCCGGC	2 cut(s)	54, 177
Ksp22I	TGATCA	1 cut(s)	1150
KspAI	GTTAAC	1 cut(s)	1411
Kzo9I	GATC	8 cut(s)	75, 209, 520, 664, 676, 901, 1123, 1150
LmnI	GCTCC	4 cut(s)	25, 164, 187, 877
Lsp1109I	GCAGC	4 cut(s)	81, 450, 545, 738
LweI	GCATC	3 cut(s)	637, 661, 1222
MaeI	CTAG	4 cut(s)	101, 273, 461, 1128
MaeII	ACGT	3 cut(s)	631, 975, 1157
MaeIII	GTNAC	1 cut(s)	808
MalI	GATC	8 cut(s)	77, 211, 522, 666, 678, 903, 1125, 1152
MboI	GATC	8 cut(s)	75, 209, 520, 664, 676, 901, 1123, 1150
MboII	GAAGA	6 cut(s)	518, 568, 767, 827, 830, 1325
MfeI	CAATTG	1 cut(s)	1047
MflI	RGATCY	2 cut(s)	664, 901
MhlI	GDGCHC	3 cut(s)	22, 169, 1163
MluCI	AATT	9 cut(s)	152, 218, 479, 487, 864, 992, 1047, 1119, 1383
Mly113I	GGCGCC	1 cut(s)	94
MlyI	GAGTC	2 cut(s)	119, 1286
MmeI	TCCRAC	1 cut(s)	614
MroNI	GCCGGC	2 cut(s)	52, 175
MseI	TTAA	7 cut(s)	495, 716, 773, 825, 867, 1323, 1410
MslI	CAYNNNNRTG	1 cut(s)	974
MspA1I	CMGCKG	2 cut(s)	434, 441
MspI	CCGG	7 cut(s)	6, 53, 60, 137, 159, 176, 191
MspR9I	CCNGG	5 cut(s)	36, 160, 185, 282, 660
MunI	CAATTG	1 cut(s)	1047
MvaI	CCWGG	4 cut(s)	36, 185, 282, 660
MwoI	GCNNNNNNNGC	8 cut(s)	46, 49, 91, 404, 559, 837, 869, 1139
NaeI	GCCGGC	2 cut(s)	54, 177
NarI	GGCGCC	1 cut(s)	94
NciI	CCSGG	1 cut(s)	160
NdeII	GATC	8 cut(s)	75, 209, 520, 664, 676, 901, 1123, 1150
NgoMIV	GCCGGC	2 cut(s)	52, 175
NlaIII	CATG	3 cut(s)	881, 1321, 1406
NlaIV	GGNNCC	5 cut(s)	95, 189, 883, 966, 967
NmuCI	GTSAC	1 cut(s)	808
NspI	RCATGY	1 cut(s)	1321
PaeR7I	CTCGAG	1 cut(s)	15
PaqCI	CACCTGC	1 cut(s)	403
PdiI	GCCGGC	2 cut(s)	54, 177
PfeI	GAWTC	2 cut(s)	298, 513
PflMI	CCANNNNNTGG	1 cut(s)	1379
PfoI	TCCNGGA	1 cut(s)	280
PleI	GAGTC	2 cut(s)	118, 1286
PluTI	GGCGCC	1 cut(s)	97
PpsI	GAGTC	2 cut(s)	118, 1286
PpuMI	RGGWCCY	1 cut(s)	965
PsiI	TTATAA	1 cut(s)	224
Psp124BI	GAGCTC	2 cut(s)	22, 169
Psp5II	RGGWCCY	1 cut(s)	965
Psp6I	CCWGG	4 cut(s)	34, 183, 280, 658
PspGI	CCWGG	4 cut(s)	34, 183, 280, 658
PspN4I	GGNNCC	5 cut(s)	95, 189, 883, 966, 967
PspPI	GGNCC	5 cut(s)	38, 181, 383, 829, 965
PspPPI	RGGWCCY	1 cut(s)	965
PspXI	VCTCGAGB	1 cut(s)	15
PsuI	RGATCY	2 cut(s)	664, 901
PvuII	CAGCTG	2 cut(s)	434, 441
RsaI	GTAC	2 cut(s)	980, 1354
RsaNI	GTAC	2 cut(s)	979, 1353
RseI	CAYNNNNRTG	1 cut(s)	974
SacI	GAGCTC	2 cut(s)	22, 169
SalI	GTCGAC	1 cut(s)	917
SaqAI	TTAA	7 cut(s)	495, 716, 773, 825, 867, 1323, 1410
Sau3AI	GATC	8 cut(s)	75, 209, 520, 664, 676, 901, 1123, 1150
Sau96I	GGNCC	5 cut(s)	38, 181, 383, 829, 965
SchI	GAGTC	2 cut(s)	119, 1286
ScrFI	CCNGG	5 cut(s)	36, 160, 185, 282, 660
SduI	GDGCHC	3 cut(s)	22, 169, 1163
SfaNI	GCATC	3 cut(s)	637, 661, 1222
SfoI	GGCGCC	1 cut(s)	95
Sfr274I	CTCGAG	1 cut(s)	15
SinI	GGWCC	2 cut(s)	181, 965
SlaI	CTCGAG	1 cut(s)	15
SmiMI	CAYNNNNRTG	1 cut(s)	974
SmlI	CTYRAG	3 cut(s)	15, 617, 1143
SmoI	CTYRAG	3 cut(s)	15, 617, 1143
Sse9I	AATT	9 cut(s)	152, 218, 479, 487, 864, 992, 1047, 1119, 1383
SspDI	GGCGCC	1 cut(s)	93
SspMI	CTAG	4 cut(s)	101, 273, 461, 1128
SstI	GAGCTC	2 cut(s)	22, 169
StyD4I	CCNGG	5 cut(s)	34, 158, 183, 280, 658
StyI	CCWWGG	3 cut(s)	888, 1127, 1358
TaaI	ACNGT	2 cut(s)	455, 837
TaiI	ACGT	3 cut(s)	634, 978, 1160
TaqI	TCGA	5 cut(s)	16, 108, 113, 208, 918
TaqII	GACCGA	1 cut(s)	753
TasI	AATT	9 cut(s)	152, 218, 479, 487, 864, 992, 1047, 1119, 1383
TauI	GCSGC	7 cut(s)	43, 46, 49, 52, 69, 85, 124
TfiI	GAWTC	2 cut(s)	298, 513
Tru1I	TTAA	7 cut(s)	495, 716, 773, 825, 867, 1323, 1410
Tru9I	TTAA	7 cut(s)	495, 716, 773, 825, 867, 1323, 1410
TscAI	CASTG	1 cut(s)	243
TseFI	GTSAC	1 cut(s)	808
TseI	GCWGC	5 cut(s)	9, 69, 438, 533, 726
Tsp45I	GTSAC	1 cut(s)	808
TspDTI	ATGAA	5 cut(s)	264, 472, 798, 864, 924
TspGWI	ACGGA	2 cut(s)	946, 1289
TspRI	CASTG	1 cut(s)	243
Van91I	CCANNNNNTGG	1 cut(s)	1379
VpaK11BI	GGWCC	2 cut(s)	181, 965
XapI	RAATTY	1 cut(s)	479
XceI	RCATGY	1 cut(s)	1321
XhoI	CTCGAG	1 cut(s)	15
XmaJI	CCTAGG	1 cut(s)	1127
XmiI	GTMKAC	2 cut(s)	326, 918
XspI	CTAG	4 cut(s)	101, 273, 461, 1128

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.