39S ribosomal protein L47
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G07830 |
| fragaria_vesca | FvH4_5g16620 |
| malus_domestica | MD06G1178500.v1.1 MD14G1184900.v1.1 |
| prunus_persica | Prupe.5G177600_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr2g0130991 RchiOBHm_Chr3g0484341 RchiOBHm_Chr3g0484351 RchiOBHm_Chr3g0484411 RchiOBHm_Chr7g0179521 RchiOBHm_Chr7g0240791 |
| rosa_laevigata | RLG00000005345 |
| rosa_multiflora | Rmu_sc0007821.1_g000005 |
| rosa_roxburghii | Rroxscaffold_2G00113410 Rroxscaffold_3G00273790 Rroxscaffold_6G00397760 |
| rosa_rugosa | Rorug02G0294400 Rorug03G0211000 Rorug06G0425100.1 Rorug06G0425200.1 |
| rosa_samantha | Rh2AG345800 Rh2BG353900 Rh2CG332400 Rh2DG372000 Rh3BG296700 Rh6AG067700 Rh7AG025100 Rh7BG024600 Rh7CG025700 Rh7DG025800 |
| rosa_wichuraiana | Rw0G018990 Rw3G023460 Rw7G002010 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcuI | CTGAAG | 1 cut(s) | 107 |
| AfaI | GTAC | 1 cut(s) | 246 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 216 |
| AgsI | TTSAA | 3 cut(s) | 37, 266, 279 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 156 |
| AluBI | AGCT | 2 cut(s) | 30, 112 |
| AluI | AGCT | 2 cut(s) | 30, 112 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 79 |
| AspLEI | GCGC | 2 cut(s) | 84, 204 |
| BccI | CCATC | 1 cut(s) | 11 |
| BfoI | RGCGCY | 1 cut(s) | 205 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 156 |
| BmsI | GCATC | 1 cut(s) | 153 |
| Bpu10I | CCTNAGC | 2 cut(s) | 72, 198 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 216 |
| Bse3DI | GCAATG | 1 cut(s) | 44 |
| BseGI | GGATG | 2 cut(s) | 103, 309 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 216 |
| BseMI | GCAATG | 1 cut(s) | 44 |
| BseMII | CTCAG | 4 cut(s) | 86, 189, 243, 282 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 216 |
| Bsp143I | GATC | 1 cut(s) | 100 |
| BspCNI | CTCAG | 4 cut(s) | 85, 190, 244, 283 |
| BsrDI | GCAATG | 1 cut(s) | 44 |
| BssMI | GATC | 1 cut(s) | 100 |
| Bst6I | CTCTTC | 1 cut(s) | 293 |
| BstDEI | CTNAG | 4 cut(s) | 72, 198, 252, 291 |
| BstF5I | GGATG | 2 cut(s) | 103, 309 |
| BstH2I | RGCGCY | 1 cut(s) | 205 |
| BstHHI | GCGC | 2 cut(s) | 84, 204 |
| BstKTI | GATC | 1 cut(s) | 103 |
| BstMBI | GATC | 1 cut(s) | 100 |
| BstNSI | RCATGY | 2 cut(s) | 145, 245 |
| BtsCI | GGATG | 2 cut(s) | 103, 309 |
| BtsIMutI | CAGTG | 1 cut(s) | 249 |
| CaiI | CAGNNNCTG | 1 cut(s) | 79 |
| CfoI | GCGC | 2 cut(s) | 84, 204 |
| Csp6I | GTAC | 1 cut(s) | 245 |
| CviAII | CATG | 2 cut(s) | 142, 242 |
| CviJI | RGCY | 3 cut(s) | 30, 71, 112 |
| CviKI_1 | RGCY | 3 cut(s) | 30, 71, 112 |
| CviQI | GTAC | 1 cut(s) | 245 |
| DdeI | CTNAG | 4 cut(s) | 72, 198, 252, 291 |
| DpnI | GATC | 1 cut(s) | 102 |
| DpnII | GATC | 1 cut(s) | 100 |
| DriI | GACNNNNNGTC | 1 cut(s) | 156 |
| Eam1104I | CTCTTC | 1 cut(s) | 293 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 156 |
| EarI | CTCTTC | 1 cut(s) | 293 |
| Eco57I | CTGAAG | 1 cut(s) | 107 |
| FaeI | CATG | 2 cut(s) | 145, 245 |
| FaiI | YATR | 3 cut(s) | 115, 143, 243 |
| FatI | CATG | 2 cut(s) | 141, 241 |
| FokI | GGATG | 2 cut(s) | 110, 316 |
| GlaI | GCGC | 2 cut(s) | 83, 203 |
| HaeII | RGCGCY | 1 cut(s) | 205 |
| HhaI | GCGC | 2 cut(s) | 84, 204 |
| Hin1II | CATG | 2 cut(s) | 145, 245 |
| Hin6I | GCGC | 2 cut(s) | 82, 202 |
| HinP1I | GCGC | 2 cut(s) | 82, 202 |
| HinfI | GANTC | 3 cut(s) | 151, 178, 275 |
| Hpy188I | TCNGA | 1 cut(s) | 162 |
| Hpy188III | TCNNGA | 2 cut(s) | 74, 197 |
| HpyAV | CCTTC | 2 cut(s) | 61, 215 |
| HpyCH4IV | ACGT | 1 cut(s) | 157 |
| HpyF3I | CTNAG | 4 cut(s) | 72, 198, 252, 291 |
| HpySE526I | ACGT | 1 cut(s) | 157 |
| Hsp92II | CATG | 2 cut(s) | 145, 245 |
| HspAI | GCGC | 2 cut(s) | 82, 202 |
| Kzo9I | GATC | 1 cut(s) | 100 |
| LpnPI | CCDG | 4 cut(s) | 59, 98, 210, 285 |
| LweI | GCATC | 1 cut(s) | 153 |
| MaeII | ACGT | 1 cut(s) | 157 |
| MalI | GATC | 1 cut(s) | 102 |
| MboI | GATC | 1 cut(s) | 100 |
| MboII | GAAGA | 3 cut(s) | 173, 278, 310 |
| MfeI | CAATTG | 1 cut(s) | 261 |
| MluCI | AATT | 1 cut(s) | 261 |
| MlyI | GAGTC | 1 cut(s) | 145 |
| MmeI | TCCRAC | 1 cut(s) | 44 |
| MnlI | CCTC | 3 cut(s) | 210, 276, 294 |
| MseI | TTAA | 1 cut(s) | 129 |
| MslI | CAYNNNNRTG | 1 cut(s) | 146 |
| MunI | CAATTG | 1 cut(s) | 261 |
| NdeII | GATC | 1 cut(s) | 100 |
| NlaIII | CATG | 2 cut(s) | 145, 245 |
| NspI | RCATGY | 2 cut(s) | 145, 245 |
| PfeI | GAWTC | 2 cut(s) | 178, 275 |
| PleI | GAGTC | 1 cut(s) | 145 |
| PpsI | GAGTC | 1 cut(s) | 145 |
| PstNI | CAGNNNCTG | 1 cut(s) | 79 |
| RsaI | GTAC | 1 cut(s) | 246 |
| RsaNI | GTAC | 1 cut(s) | 245 |
| RseI | CAYNNNNRTG | 1 cut(s) | 146 |
| SaqAI | TTAA | 1 cut(s) | 129 |
| Sau3AI | GATC | 1 cut(s) | 100 |
| SchI | GAGTC | 1 cut(s) | 145 |
| SetI | ASST | 6 cut(s) | 32, 58, 114, 160, 274, 287 |
| SfaNI | GCATC | 1 cut(s) | 153 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 146 |
| Sse9I | AATT | 1 cut(s) | 261 |
| TaiI | ACGT | 1 cut(s) | 160 |
| TaqI | TCGA | 1 cut(s) | 58 |
| TasI | AATT | 1 cut(s) | 261 |
| TatI | WGTACW | 1 cut(s) | 244 |
| TfiI | GAWTC | 2 cut(s) | 178, 275 |
| Tru1I | TTAA | 1 cut(s) | 129 |
| Tru9I | TTAA | 1 cut(s) | 129 |
| TscAI | CASTG | 1 cut(s) | 256 |
| TspDTI | ATGAA | 2 cut(s) | 33, 311 |
| TspRI | CASTG | 1 cut(s) | 256 |
| XceI | RCATGY | 2 cut(s) | 145, 245 |