39S ribosomal protein L47
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G07830 |
| fragaria_vesca | FvH4_5g16620 |
| malus_domestica | MD06G1178500.v1.1 MD14G1184900.v1.1 |
| prunus_persica | Prupe.5G177600_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr2g0130991 RchiOBHm_Chr3g0484341 RchiOBHm_Chr3g0484351 RchiOBHm_Chr3g0484411 RchiOBHm_Chr7g0179521 RchiOBHm_Chr7g0240791 |
| rosa_laevigata | RLG00000005345 |
| rosa_multiflora | Rmu_sc0007821.1_g000005 |
| rosa_roxburghii | Rroxscaffold_2G00113410 Rroxscaffold_3G00273790 Rroxscaffold_6G00397760 |
| rosa_rugosa | Rorug02G0294400 Rorug03G0211000 Rorug06G0425100.1 Rorug06G0425200.1 |
| rosa_samantha | Rh2AG345800 Rh2BG353900 Rh2CG332400 Rh2DG372000 Rh3BG296700 Rh6AG067700 Rh7AG025100 Rh7BG024600 Rh7CG025700 Rh7DG025800 |
| rosa_wichuraiana | Rw0G018990 Rw3G023460 Rw7G002010 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcuI | CTGAAG | 1 cut(s) | 65 |
| AfaI | GTAC | 1 cut(s) | 204 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 174, 237 |
| AgsI | TTSAA | 1 cut(s) | 224 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 114 |
| AjnI | CCWGG | 2 cut(s) | 50, 236 |
| AluBI | AGCT | 1 cut(s) | 70 |
| AluI | AGCT | 1 cut(s) | 70 |
| AspLEI | GCGC | 1 cut(s) | 162 |
| BciT130I | CCWGG | 2 cut(s) | 52, 238 |
| BfoI | RGCGCY | 1 cut(s) | 163 |
| Bme1390I | CCNGG | 2 cut(s) | 52, 238 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 114 |
| BmrFI | CCNGG | 2 cut(s) | 52, 238 |
| BmsI | GCATC | 2 cut(s) | 38, 111 |
| Bpu10I | CCTNAGC | 1 cut(s) | 156 |
| BsaAI | YACGTR | 1 cut(s) | 202 |
| BsaJI | CCNNGG | 1 cut(s) | 51 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 174, 237 |
| BseBI | CCWGG | 2 cut(s) | 52, 238 |
| BseDI | CCNNGG | 1 cut(s) | 51 |
| BseGI | GGATG | 2 cut(s) | 61, 267 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 174, 237 |
| BseMII | CTCAG | 2 cut(s) | 147, 201 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 174, 237 |
| Bsp143I | GATC | 1 cut(s) | 58 |
| BspCNI | CTCAG | 2 cut(s) | 148, 202 |
| BssECI | CCNNGG | 1 cut(s) | 51 |
| BssMI | GATC | 1 cut(s) | 58 |
| Bst2UI | CCWGG | 2 cut(s) | 52, 238 |
| Bst6I | CTCTTC | 1 cut(s) | 251 |
| BstBAI | YACGTR | 1 cut(s) | 202 |
| BstDEI | CTNAG | 3 cut(s) | 156, 210, 249 |
| BstF5I | GGATG | 2 cut(s) | 61, 267 |
| BstH2I | RGCGCY | 1 cut(s) | 163 |
| BstHHI | GCGC | 1 cut(s) | 162 |
| BstKTI | GATC | 1 cut(s) | 61 |
| BstMBI | GATC | 1 cut(s) | 58 |
| BstNI | CCWGG | 2 cut(s) | 52, 238 |
| BstNSI | RCATGY | 1 cut(s) | 103 |
| BstSCI | CCNGG | 2 cut(s) | 50, 236 |
| BtsCI | GGATG | 2 cut(s) | 61, 267 |
| BtsIMutI | CAGTG | 1 cut(s) | 207 |
| CfoI | GCGC | 1 cut(s) | 162 |
| CseI | GACGC | 1 cut(s) | 29 |
| Csp6I | GTAC | 1 cut(s) | 203 |
| CviAII | CATG | 1 cut(s) | 100 |
| CviJI | RGCY | 1 cut(s) | 70 |
| CviKI_1 | RGCY | 1 cut(s) | 70 |
| CviQI | GTAC | 1 cut(s) | 203 |
| DdeI | CTNAG | 3 cut(s) | 156, 210, 249 |
| DpnI | GATC | 1 cut(s) | 60 |
| DpnII | GATC | 1 cut(s) | 58 |
| DriI | GACNNNNNGTC | 1 cut(s) | 114 |
| Eam1104I | CTCTTC | 1 cut(s) | 251 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 114 |
| EarI | CTCTTC | 1 cut(s) | 251 |
| Eco57I | CTGAAG | 1 cut(s) | 65 |
| EcoRII | CCWGG | 2 cut(s) | 50, 236 |
| FaeI | CATG | 1 cut(s) | 103 |
| FaiI | YATR | 2 cut(s) | 73, 101 |
| FatI | CATG | 1 cut(s) | 99 |
| FokI | GGATG | 2 cut(s) | 68, 274 |
| GlaI | GCGC | 1 cut(s) | 161 |
| HaeII | RGCGCY | 1 cut(s) | 163 |
| HgaI | GACGC | 1 cut(s) | 29 |
| HhaI | GCGC | 1 cut(s) | 162 |
| Hin1II | CATG | 1 cut(s) | 103 |
| Hin6I | GCGC | 1 cut(s) | 160 |
| HinP1I | GCGC | 1 cut(s) | 160 |
| HinfI | GANTC | 3 cut(s) | 109, 136, 233 |
| Hpy188I | TCNGA | 3 cut(s) | 34, 45, 120 |
| Hpy188III | TCNNGA | 1 cut(s) | 155 |
| HpyAV | CCTTC | 2 cut(s) | 19, 173 |
| HpyCH4IV | ACGT | 2 cut(s) | 115, 201 |
| HpyF3I | CTNAG | 3 cut(s) | 156, 210, 249 |
| HpySE526I | ACGT | 2 cut(s) | 115, 201 |
| Hsp92II | CATG | 1 cut(s) | 103 |
| HspAI | GCGC | 1 cut(s) | 160 |
| Kzo9I | GATC | 1 cut(s) | 58 |
| LpnPI | CCDG | 6 cut(s) | 37, 64, 95, 168, 223, 250 |
| LweI | GCATC | 2 cut(s) | 38, 111 |
| MaeII | ACGT | 2 cut(s) | 115, 201 |
| MalI | GATC | 1 cut(s) | 60 |
| MboI | GATC | 1 cut(s) | 58 |
| MboII | GAAGA | 3 cut(s) | 131, 236, 268 |
| MfeI | CAATTG | 1 cut(s) | 219 |
| MluCI | AATT | 1 cut(s) | 219 |
| MlyI | GAGTC | 1 cut(s) | 103 |
| MnlI | CCTC | 3 cut(s) | 168, 234, 252 |
| MseI | TTAA | 1 cut(s) | 87 |
| MslI | CAYNNNNRTG | 1 cut(s) | 104 |
| MspR9I | CCNGG | 2 cut(s) | 52, 238 |
| MunI | CAATTG | 1 cut(s) | 219 |
| MvaI | CCWGG | 2 cut(s) | 52, 238 |
| NdeII | GATC | 1 cut(s) | 58 |
| NlaIII | CATG | 1 cut(s) | 103 |
| NspI | RCATGY | 1 cut(s) | 103 |
| PfeI | GAWTC | 2 cut(s) | 136, 233 |
| PfoI | TCCNGGA | 1 cut(s) | 236 |
| PleI | GAGTC | 1 cut(s) | 103 |
| PpsI | GAGTC | 1 cut(s) | 103 |
| Ppu21I | YACGTR | 1 cut(s) | 202 |
| Psp6I | CCWGG | 2 cut(s) | 50, 236 |
| PspGI | CCWGG | 2 cut(s) | 50, 236 |
| RsaI | GTAC | 1 cut(s) | 204 |
| RsaNI | GTAC | 1 cut(s) | 203 |
| RseI | CAYNNNNRTG | 1 cut(s) | 104 |
| SaqAI | TTAA | 1 cut(s) | 87 |
| Sau3AI | GATC | 1 cut(s) | 58 |
| SchI | GAGTC | 1 cut(s) | 103 |
| ScrFI | CCNGG | 2 cut(s) | 52, 238 |
| SetI | ASST | 4 cut(s) | 72, 118, 204, 245 |
| SfaNI | GCATC | 2 cut(s) | 38, 111 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 104 |
| Sse9I | AATT | 1 cut(s) | 219 |
| StyD4I | CCNGG | 2 cut(s) | 50, 236 |
| TaiI | ACGT | 2 cut(s) | 118, 204 |
| TaqI | TCGA | 1 cut(s) | 16 |
| TasI | AATT | 1 cut(s) | 219 |
| TfiI | GAWTC | 2 cut(s) | 136, 233 |
| Tru1I | TTAA | 1 cut(s) | 87 |
| Tru9I | TTAA | 1 cut(s) | 87 |
| TscAI | CASTG | 1 cut(s) | 214 |
| TspDTI | ATGAA | 1 cut(s) | 269 |
| TspRI | CASTG | 1 cut(s) | 214 |
| XceI | RCATGY | 1 cut(s) | 103 |