39S ribosomal protein L47
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G07830 |
| fragaria_vesca | FvH4_5g16620 |
| malus_domestica | MD06G1178500.v1.1 MD14G1184900.v1.1 |
| prunus_persica | Prupe.5G177600_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr2g0130991 RchiOBHm_Chr3g0484341 RchiOBHm_Chr3g0484351 RchiOBHm_Chr3g0484411 RchiOBHm_Chr7g0179521 RchiOBHm_Chr7g0240791 |
| rosa_laevigata | RLG00000005345 |
| rosa_multiflora | Rmu_sc0007821.1_g000005 |
| rosa_roxburghii | Rroxscaffold_2G00113410 Rroxscaffold_3G00273790 Rroxscaffold_6G00397760 |
| rosa_rugosa | Rorug02G0294400 Rorug03G0211000 Rorug06G0425100.1 Rorug06G0425200.1 |
| rosa_samantha | Rh2AG345800 Rh2BG353900 Rh2CG332400 Rh2DG372000 Rh3BG296700 Rh6AG067700 Rh7AG025100 Rh7BG024600 Rh7CG025700 Rh7DG025800 |
| rosa_wichuraiana | Rw0G018990 Rw3G023460 Rw7G002010 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 110 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 106 |
| AgsI | TTSAA | 2 cut(s) | 119, 238 |
| AluBI | AGCT | 2 cut(s) | 211, 251 |
| AluI | AGCT | 2 cut(s) | 211, 251 |
| ApeKI | GCWGC | 3 cut(s) | 41, 44, 68 |
| ApoI | RAATTY | 1 cut(s) | 110 |
| BbsI | GAAGAC | 1 cut(s) | 172 |
| BbvI | GCAGC | 3 cut(s) | 28, 55, 56 |
| BceAI | ACGGC | 1 cut(s) | 105 |
| BfmI | CTRYAG | 1 cut(s) | 42 |
| BisI | GCNGC | 3 cut(s) | 42, 45, 69 |
| BlsI | GCNGC | 3 cut(s) | 43, 46, 70 |
| BoxI | GACNNNNGTC | 1 cut(s) | 187 |
| BpiI | GAAGAC | 1 cut(s) | 172 |
| BpuEI | CTTGAG | 1 cut(s) | 125 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 106 |
| Bse1I | ACTGG | 1 cut(s) | 149 |
| BseGI | GGATG | 1 cut(s) | 202 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 106 |
| BseNI | ACTGG | 1 cut(s) | 149 |
| BseXI | GCAGC | 3 cut(s) | 28, 55, 56 |
| BslFI | GGGAC | 1 cut(s) | 245 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 106 |
| BsmFI | GGGAC | 1 cut(s) | 245 |
| Bsp143I | GATC | 1 cut(s) | 199 |
| BspMAI | CTGCAG | 1 cut(s) | 46 |
| BsrI | ACTGG | 1 cut(s) | 149 |
| BssMI | GATC | 1 cut(s) | 199 |
| BstDEI | CTNAG | 1 cut(s) | 81 |
| BstF5I | GGATG | 1 cut(s) | 202 |
| BstKTI | GATC | 1 cut(s) | 202 |
| BstMBI | GATC | 1 cut(s) | 199 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 77 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 187 |
| BstSFI | CTRYAG | 1 cut(s) | 42 |
| BstV1I | GCAGC | 3 cut(s) | 28, 55, 56 |
| BstV2I | GAAGAC | 1 cut(s) | 172 |
| BtsCI | GGATG | 1 cut(s) | 202 |
| CviJI | RGCY | 7 cut(s) | 47, 80, 92, 133, 148, 211, 251 |
| CviKI_1 | RGCY | 7 cut(s) | 47, 80, 92, 133, 148, 211, 251 |
| DdeI | CTNAG | 1 cut(s) | 81 |
| DpnI | GATC | 1 cut(s) | 201 |
| DpnII | GATC | 1 cut(s) | 199 |
| EcoRI | GAATTC | 1 cut(s) | 110 |
| FaiI | YATR | 7 cut(s) | 77, 157, 159, 214, 285, 287, 295 |
| FaqI | GGGAC | 1 cut(s) | 245 |
| Fnu4HI | GCNGC | 3 cut(s) | 42, 45, 69 |
| FokI | GGATG | 1 cut(s) | 209 |
| Fsp4HI | GCNGC | 3 cut(s) | 42, 45, 69 |
| GluI | GCNGC | 3 cut(s) | 42, 45, 69 |
| HinfI | GANTC | 1 cut(s) | 226 |
| Hpy188I | TCNGA | 1 cut(s) | 55 |
| Hpy188III | TCNNGA | 1 cut(s) | 242 |
| HpyAV | CCTTC | 2 cut(s) | 69, 283 |
| HpyCH4V | TGCA | 1 cut(s) | 44 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 77 |
| HpyF3I | CTNAG | 1 cut(s) | 81 |
| Kzo9I | GATC | 1 cut(s) | 199 |
| LpnPI | CCDG | 8 cut(s) | 10, 48, 147, 162, 237, 255, 276, 282 |
| Lsp1109I | GCAGC | 3 cut(s) | 28, 55, 56 |
| MalI | GATC | 1 cut(s) | 201 |
| MboI | GATC | 1 cut(s) | 199 |
| MboII | GAAGA | 1 cut(s) | 177 |
| MluCI | AATT | 1 cut(s) | 110 |
| MmeI | TCCRAC | 1 cut(s) | 142 |
| MnlI | CCTC | 1 cut(s) | 100 |
| MslI | CAYNNNNRTG | 1 cut(s) | 284 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 77 |
| NdeII | GATC | 1 cut(s) | 199 |
| PfeI | GAWTC | 1 cut(s) | 226 |
| PkrI | GCNGC | 3 cut(s) | 43, 46, 70 |
| PshAI | GACNNNNGTC | 1 cut(s) | 187 |
| PstI | CTGCAG | 1 cut(s) | 46 |
| RseI | CAYNNNNRTG | 1 cut(s) | 284 |
| SatI | GCNGC | 3 cut(s) | 42, 45, 69 |
| Sau3AI | GATC | 1 cut(s) | 199 |
| SetI | ASST | 6 cut(s) | 20, 61, 127, 213, 253, 294 |
| SfcI | CTRYAG | 1 cut(s) | 42 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 284 |
| SmlI | CTYRAG | 1 cut(s) | 104 |
| SmoI | CTYRAG | 1 cut(s) | 104 |
| Sse9I | AATT | 1 cut(s) | 110 |
| TasI | AATT | 1 cut(s) | 110 |
| TfiI | GAWTC | 1 cut(s) | 226 |
| TseI | GCWGC | 3 cut(s) | 41, 44, 68 |
| XapI | RAATTY | 1 cut(s) | 110 |