39S ribosomal protein L47
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G07830 |
| fragaria_vesca | FvH4_5g16620 |
| malus_domestica | MD06G1178500.v1.1 MD14G1184900.v1.1 |
| prunus_persica | Prupe.5G177600_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr2g0130991 RchiOBHm_Chr3g0484341 RchiOBHm_Chr3g0484351 RchiOBHm_Chr3g0484411 RchiOBHm_Chr7g0179521 RchiOBHm_Chr7g0240791 |
| rosa_laevigata | RLG00000005345 |
| rosa_multiflora | Rmu_sc0007821.1_g000005 |
| rosa_roxburghii | Rroxscaffold_2G00113410 Rroxscaffold_3G00273790 Rroxscaffold_6G00397760 |
| rosa_rugosa | Rorug02G0294400 Rorug03G0211000 Rorug06G0425100.1 Rorug06G0425200.1 |
| rosa_samantha | Rh2AG345800 Rh2BG353900 Rh2CG332400 Rh2DG372000 Rh3BG296700 Rh6AG067700 Rh7AG025100 Rh7BG024600 Rh7CG025700 Rh7DG025800 |
| rosa_wichuraiana | Rw0G018990 Rw3G023460 Rw7G002010 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 101 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 106 |
| AgsI | TTSAA | 1 cut(s) | 119 |
| AoxI | GGCC | 1 cut(s) | 90 |
| ApeKI | GCWGC | 3 cut(s) | 41, 44, 68 |
| AspS9I | GGNCC | 1 cut(s) | 91 |
| BbvI | GCAGC | 3 cut(s) | 28, 55, 56 |
| BceAI | ACGGC | 1 cut(s) | 105 |
| BfaI | CTAG | 1 cut(s) | 81 |
| BfmI | CTRYAG | 1 cut(s) | 42 |
| BisI | GCNGC | 3 cut(s) | 42, 45, 69 |
| BlsI | GCNGC | 3 cut(s) | 43, 46, 70 |
| BmgT120I | GGNCC | 1 cut(s) | 91 |
| BmsI | GCATC | 1 cut(s) | 184 |
| BpuEI | CTTGAG | 1 cut(s) | 125 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 106 |
| Bse1I | ACTGG | 1 cut(s) | 148 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 106 |
| BseNI | ACTGG | 1 cut(s) | 148 |
| BseRI | GAGGAG | 1 cut(s) | 122 |
| BseXI | GCAGC | 3 cut(s) | 28, 55, 56 |
| BshFI | GGCC | 1 cut(s) | 92 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 106 |
| BsnI | GGCC | 1 cut(s) | 92 |
| BspACI | CCGC | 1 cut(s) | 101 |
| BspANI | GGCC | 1 cut(s) | 92 |
| BspMAI | CTGCAG | 1 cut(s) | 46 |
| BsrI | ACTGG | 1 cut(s) | 148 |
| Bst4CI | ACNGT | 1 cut(s) | 36 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 77 |
| BstSFI | CTRYAG | 1 cut(s) | 42 |
| BstV1I | GCAGC | 3 cut(s) | 28, 55, 56 |
| BsuRI | GGCC | 1 cut(s) | 92 |
| BtsIMutI | CAGTG | 1 cut(s) | 32 |
| Cfr13I | GGNCC | 1 cut(s) | 91 |
| CseI | GACGC | 1 cut(s) | 175 |
| CviJI | RGCY | 5 cut(s) | 47, 80, 92, 132, 147 |
| CviKI_1 | RGCY | 5 cut(s) | 47, 80, 92, 132, 147 |
| FaiI | YATR | 3 cut(s) | 77, 156, 158 |
| FauI | CCCGC | 1 cut(s) | 108 |
| Fnu4HI | GCNGC | 3 cut(s) | 42, 45, 69 |
| Fsp4HI | GCNGC | 3 cut(s) | 42, 45, 69 |
| FspBI | CTAG | 1 cut(s) | 81 |
| GluI | GCNGC | 3 cut(s) | 42, 45, 69 |
| HaeIII | GGCC | 1 cut(s) | 92 |
| HgaI | GACGC | 1 cut(s) | 175 |
| Hpy188I | TCNGA | 3 cut(s) | 55, 180, 191 |
| Hpy99I | CGWCG | 1 cut(s) | 91 |
| HpyAV | CCTTC | 2 cut(s) | 50, 165 |
| HpyCH4III | ACNGT | 1 cut(s) | 36 |
| HpyCH4V | TGCA | 1 cut(s) | 44 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 77 |
| LpnPI | CCDG | 4 cut(s) | 10, 48, 146, 161 |
| Lsp1109I | GCAGC | 3 cut(s) | 28, 55, 56 |
| LweI | GCATC | 1 cut(s) | 184 |
| MaeI | CTAG | 1 cut(s) | 81 |
| MmeI | TCCRAC | 1 cut(s) | 148 |
| MnlI | CCTC | 1 cut(s) | 100 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 77 |
| PkrI | GCNGC | 3 cut(s) | 43, 46, 70 |
| PspPI | GGNCC | 1 cut(s) | 91 |
| PstI | CTGCAG | 1 cut(s) | 46 |
| SatI | GCNGC | 3 cut(s) | 42, 45, 69 |
| Sau96I | GGNCC | 1 cut(s) | 91 |
| SetI | ASST | 2 cut(s) | 20, 61 |
| SfaNI | GCATC | 1 cut(s) | 184 |
| SfcI | CTRYAG | 1 cut(s) | 42 |
| SgeI | CNNG | 8 cut(s) | 27, 37, 75, 93, 112, 116, 145, 160 |
| SmlI | CTYRAG | 1 cut(s) | 104 |
| SmoI | CTYRAG | 1 cut(s) | 104 |
| SsiI | CCGC | 1 cut(s) | 101 |
| SspMI | CTAG | 1 cut(s) | 81 |
| TaaI | ACNGT | 1 cut(s) | 36 |
| TaqI | TCGA | 1 cut(s) | 162 |
| TscAI | CASTG | 1 cut(s) | 39 |
| TseI | GCWGC | 3 cut(s) | 41, 44, 68 |
| TspDTI | ATGAA | 1 cut(s) | 152 |
| TspRI | CASTG | 1 cut(s) | 39 |
| XspI | CTAG | 1 cut(s) | 81 |