Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr5

Orthogroup ID

OG0005009

Physical Location & Seq

Genomic Coordinates Forward (+)

20219530 .. 20228328

Gene Structure 8799 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000023230

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1725 bp

ATGGCAGCTCGGAAGCGAGCTTCAACAAGCTCGTCCTCCTCGACTCAAACCAAACCAAGCGAGCCAGCCAAAACCCAAGAAGCAGCAGAAGCGCCAATCTCAGCACCCAAGTCCGGTGTGATTCTCAAGCTGACGGCGTTGTTCTCCGTCCCCTACTTTTACCTGGTCTTGTACCATTACAAGATTGAGCAGGAGCTCAGAAATTCGATTCTGATCAATGCCGCCCTCAGCCTGGCGGCGTTCTTCGTCACCGTTAAGTTGATCCCTGTGGCTTCTAGATACGTTCTCAGGCGCAATCTGTTTGGCTACGACATTAACAAAAAGGGTACTCCTCAGGGTACTATTAAAGTGCCAGAGTCGTTGGGCATTGTTGTTGGAATTGTCTTCTTGGTCTTTTCGATATTATTTCAGTATTTCAACTTCACTGCAGATTCAAATTGGCTTGTTGAGTACAATGCAGCATTAGCCTCCATATGCTTTATGGTATTGCTGGGATTTGTAGATGATGTTCTTGATGTACCTTGGAGAGTGAAATTAATACTGCCATCAATTGCAGCTTTACCTCTGCTGATGGCTTATGCTGGACATACAACTATTATCATACCGAAGCCTCTTGTTCCATATGTTGGGCTAGAGGTCTGGGATCTAGGATGGATGTATAAACTATATATGGGACTTTTGGCGGTTTTCTGTACAAACTCAATTAATATTCATGCTGGATTGAATGGTCTTGAAGTTGGCCAGACAGTTGTAATTGCATCTGCTATTTTAGTACACAATATCATGCAAATTGGAGCATCTGCAGATTTTGAGTACAAGATGGCTCATGCATTCTCTATATATCTTGCCCAACCCTTACTGGCAACCTCCTTGGCATTGTTCTCTTACAACTGGTATCCTTCTTCAGCTTTTGTTGGAGATACTTACACATACTTTGCTGGGATGACTATGGCTGTAGTTGGGATTCTTGGCCATTTTAGTGAAACACTCCTGATTTTCTTTCTCCCTCAAGTCTTGAACTTTCTCTTGTCGCTGCCCCAGCTTGCTGGGATCATTCCATGTCCGCGCCATCGTCTCCCAAGGTTCGATCCTCAAACTGGACTGCTGACTGGGACAAATGATGGGACCCTTGTAAACTTGTTCCTAAGACAATTTGGCAGGATGACAGAGAAGAAACTTTGTGTTTATCTTCTCGTTTTCCAGGCTCTAGCATGCTGCTTCTGTTTCCTGTTGAGATACTTCCTTGCTGGCATCTGGTCACCAACAACAAAAGCCCACCTCCAAAAGAGCAATATTACAATGATGATGGTGGCAAGGTATTTCAGGCGAACACTGTTTGCTGCAGCCAAATCAGAAGGTTCTGGTGCTGCTTCTATGGCTAGGACGACGGCCCACAATCCGCTTGAGGAGTTCTTTGAAGCAGATAGGAAGCCTGATGAAGAAAAGCCAGTTGTATATGGTCGAAGTTGGAAGGCATCTGAACTGCGTCTGAAGTCTTGGGATGATCTCAATAAGCTATGGTTTGTTCTGCTTAAAGAGAAAAACATGCTGATGACTCAACGTCAGATGCTTCACGCACAGAATCTTCGTTTTCCTAACCCTGAGCGCCTTCCCAAAGTGAGGAAGTCAATGTGTCGTATCAAGCACGTACTCACTGAGAGAGCAATTGAAGAACCCGATTCCAGGAGGTCTGCTGAGATGAAGAGGATGATAAATGCATTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003975 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0006464 GO:0006486 GO:0006487 GO:0006488 GO:0006489 GO:0006490 GO:0006629 GO:0006644 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0008610 GO:0008654 GO:0009058 GO:0009059 GO:0009100 GO:0009101 GO:0009987 GO:0012505 GO:0016020 GO:0016021 GO:0016740 GO:0016772 GO:0016780 GO:0019538 GO:0019637 GO:0031224 GO:0031984 GO:0034645 GO:0036211 GO:0042175 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043413 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0046465 GO:0070085 GO:0071704 GO:0090407 GO:0098827 GO:1901135 GO:1901137 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00510 ko01100 map00510 map01100

Pfam Domains

Protein Families

Glycos_transf_4

Protein Analysis

575

Amino Acids

64.56

Weight (kDa)

9.47

Isoelectric Point (pI)

41.12

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glycos_transf_4	PF00953	154 - 324	1.9e-26	Glycosyl transferase family 4
MRP-L47	PF06984	468 - 554	1.5e-33	Mitochondrial 39-S ribosomal protein L47 (MRP-L47)
Ribosomal_L29	PF00831	493 - 554	6.7e-08	Ribosomal L29 protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005009)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G41490 AT3G57220
fragaria_vesca	FvH4_6g24760 FvH4_6g24760 FvH4_6g24760 FvH4_6g24760 FvH4_6g24760
malus_domestica	MD12G1086200.v1.1 MD14G1080600.v1.1
prunus_persica	Prupe.1G032300_v2.0.a1 Prupe.7G050100_v2.0.a1
pyrus_communis	pycom12g07300 pycom14g06990
rosa_chinensis	RchiOBHm_Chr3g0484361 RchiOBHm_Chr3g0484421 RchiOBHm_Chr3g0484511
rosa_laevigata	RLG00000023230
rosa_multiflora	Rmu_sc0002910.1_g000009
rosa_roxburghii	Rroxscaffold_6G00397750
rosa_rugosa	Rorug03G0211000 Rorug03G0211100 Rorug03G0211200
rosa_samantha	Rh3AG260100 Rh3AG260600 Rh3AG261100 Rh3AG261800 Rh3BG296800 Rh3CG294300 Rh3DG290400
rosa_wichuraiana	Rw3G023470

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	626
AccII	CGCG	1 cut(s)	1066
AciI	CCGC	5 cut(s)	222, 236, 683, 1064, 1400
AclWI	GGATC	4 cut(s)	256, 651, 1058, 1082
AcoI	YGGCCR	2 cut(s)	739, 970
AcsI	RAATTY	1 cut(s)	202
AcuI	CTGAAG	2 cut(s)	888, 1511
AfaI	GTAC	9 cut(s)	173, 328, 340, 452, 519, 694, 774, 815, 1650
AfiI	CCNNNNNNNGG	6 cut(s)	113, 232, 626, 1097, 1620, 1683
AgsI	TTSAA	8 cut(s)	24, 418, 435, 724, 734, 1018, 1418, 1670
AhdI	GACNNNNNGTC	1 cut(s)	1560
AjnI	CCWGG	4 cut(s)	162, 231, 1200, 1682
AluBI	AGCT	9 cut(s)	8, 20, 30, 130, 196, 557, 908, 1042, 1516
AluI	AGCT	9 cut(s)	8, 20, 30, 130, 196, 557, 908, 1042, 1516
Alw21I	GWGCWC	1 cut(s)	198
Alw26I	GTCTC	1 cut(s)	1079
AlwI	GGATC	4 cut(s)	256, 651, 1058, 1082
AoxI	GGCC	3 cut(s)	739, 970, 1389
ApeKI	GCWGC	9 cut(s)	5, 83, 458, 554, 1033, 1215, 1340, 1343, 1367
ApoI	RAATTY	1 cut(s)	202
AseI	ATTAAT	2 cut(s)	536, 705
AspLEI	GCGC	4 cut(s)	94, 294, 1068, 1608
AspS9I	GGNCC	2 cut(s)	1125, 1390
AsuHPI	GGTGA	2 cut(s)	241, 1251
AvaII	GGWCC	1 cut(s)	1125
AxyI	CCTNAGG	1 cut(s)	333
BalI	TGGCCA	2 cut(s)	741, 972
BanII	GRGCYC	1 cut(s)	198
BarI	GAAGNNNNNNTAC	2 cut(s)	404, 436
BbsI	GAAGAC	1 cut(s)	376
Bbv12I	GWGCWC	1 cut(s)	198
BbvCI	CCTCAGC	1 cut(s)	227
BbvI	GCAGC	9 cut(s)	17, 95, 470, 566, 1020, 1202, 1327, 1354, 1355
BccI	CCATC	7 cut(s)	553, 565, 645, 814, 1077, 1115, 1300
BceAI	ACGGC	2 cut(s)	150, 1404
BciT130I	CCWGG	4 cut(s)	164, 233, 1202, 1684
BciVI	GTATCC	1 cut(s)	906
BclI	TGATCA	1 cut(s)	213
BcoDI	GTCTC	1 cut(s)	1079
BfaI	CTAG	5 cut(s)	276, 632, 647, 1208, 1380
BfmI	CTRYAG	4 cut(s)	426, 801, 954, 1341
BfoI	RGCGCY	2 cut(s)	95, 1609
BfuI	GTATCC	1 cut(s)	906
Bme1390I	CCNGG	4 cut(s)	164, 233, 1202, 1684
Bme18I	GGWCC	1 cut(s)	1125
BmeRI	GACNNNNNGTC	1 cut(s)	1560
BmgT120I	GGNCC	2 cut(s)	1125, 1390
BmiI	GGNNCC	2 cut(s)	1126, 1127
BmrFI	CCNGG	4 cut(s)	164, 233, 1202, 1684
BmrI	ACTGGG	1 cut(s)	1119
BmsI	GCATC	5 cut(s)	767, 806, 1260, 1484, 1557
BmuI	ACTGGG	1 cut(s)	1119
BpiI	GAAGAC	1 cut(s)	376
Bpu10I	CCTNAGC	2 cut(s)	227, 1602
BpuEI	CTTGAG	3 cut(s)	110, 993, 1424
BsaAI	YACGTR	1 cut(s)	1648
BsaBI	GATNNNNATC	1 cut(s)	212
BsaJI	CCNNGG	3 cut(s)	521, 870, 1079
BsaWI	WCCGGW	1 cut(s)	113
Bsc4I	CCNNNNNNNGG	6 cut(s)	113, 232, 626, 1097, 1620, 1683
Bse1I	ACTGG	5 cut(s)	864, 896, 1102, 1114, 1448
Bse21I	CCTNAGG	1 cut(s)	333
Bse8I	GATNNNNATC	1 cut(s)	212
BseBI	CCWGG	4 cut(s)	164, 233, 1202, 1684
BseDI	CCNNGG	3 cut(s)	521, 870, 1079
BseGI	GGATG	6 cut(s)	656, 660, 948, 1167, 1507, 1713
BseJI	GATNNNNATC	1 cut(s)	212
BseLI	CCNNNNNNNGG	6 cut(s)	113, 232, 626, 1097, 1620, 1683
BseMII	CTCAG	8 cut(s)	114, 211, 241, 301, 347, 1593, 1647, 1686
BseNI	ACTGG	5 cut(s)	864, 896, 1102, 1114, 1448
BseRI	GAGGAG	3 cut(s)	28, 321, 1421
BseXI	GCAGC	9 cut(s)	17, 95, 470, 566, 1020, 1202, 1327, 1354, 1355
BseYI	CCCAGC	4 cut(s)	490, 938, 1038, 1046
Bsh1236I	CGCG	1 cut(s)	1066
BshFI	GGCC	3 cut(s)	741, 972, 1391
BsiHKAI	GWGCWC	1 cut(s)	198
BsiSI	CCGG	1 cut(s)	114
BslFI	GGGAC	4 cut(s)	134, 687, 1126, 1138
BslI	CCNNNNNNNGG	6 cut(s)	113, 232, 626, 1097, 1620, 1683
BsmAI	GTCTC	1 cut(s)	1079
BsmBI	CGTCTC	1 cut(s)	1079
BsmFI	GGGAC	4 cut(s)	134, 687, 1126, 1138
BsmI	GAATGC	1 cut(s)	830
BsnI	GGCC	3 cut(s)	741, 972, 1391
Bsp1286I	GDGCHC	1 cut(s)	198
Bsp1407I	TGTACA	1 cut(s)	692
Bsp143I	GATC	6 cut(s)	213, 261, 643, 1050, 1087, 1504
BspACI	CCGC	5 cut(s)	222, 236, 683, 1064, 1400
BspANI	GGCC	3 cut(s)	741, 972, 1391
BspCNI	CTCAG	8 cut(s)	113, 210, 240, 300, 346, 1594, 1648, 1687
BspFNI	CGCG	1 cut(s)	1066
BspLI	GGNNCC	2 cut(s)	1126, 1127
BspMAI	CTGCAG	3 cut(s)	430, 805, 1345
BspPI	GGATC	4 cut(s)	256, 651, 1058, 1082
BsrGI	TGTACA	1 cut(s)	692
BsrI	ACTGG	5 cut(s)	864, 896, 1102, 1114, 1448
BssECI	CCNNGG	3 cut(s)	521, 870, 1079
BssMI	GATC	6 cut(s)	213, 261, 643, 1050, 1087, 1504
BssT1I	CCWWGG	3 cut(s)	521, 870, 1079
Bst2UI	CCWGG	4 cut(s)	164, 233, 1202, 1684
Bst4CI	ACNGT	3 cut(s)	253, 748, 1335
Bst6I	CTCTTC	1 cut(s)	1697
BstAUI	TGTACA	1 cut(s)	692
BstBAI	YACGTR	1 cut(s)	1648
BstC8I	GCNNGC	6 cut(s)	18, 62, 66, 1044, 1213, 1249
BstDEI	CTNAG	9 cut(s)	100, 197, 227, 287, 333, 1145, 1602, 1656, 1695
BstEII	GGTNACC	1 cut(s)	1257
BstF5I	GGATG	6 cut(s)	656, 660, 948, 1167, 1507, 1713
BstFNI	CGCG	1 cut(s)	1066
BstH2I	RGCGCY	2 cut(s)	95, 1609
BstHHI	GCGC	4 cut(s)	94, 294, 1068, 1608
BstKTI	GATC	6 cut(s)	216, 264, 646, 1053, 1090, 1507
BstMAI	GTCTC	1 cut(s)	1079
BstMBI	GATC	6 cut(s)	213, 261, 643, 1050, 1087, 1504
BstMWI	GCNNNNNNNGC	4 cut(s)	89, 464, 1039, 1376
BstNI	CCWGG	4 cut(s)	164, 233, 1202, 1684
BstNSI	RCATGY	2 cut(s)	1215, 1549
BstPI	GGTNACC	1 cut(s)	1257
BstSCI	CCNGG	4 cut(s)	162, 231, 1200, 1682
BstSFI	CTRYAG	4 cut(s)	426, 801, 954, 1341
BstUI	CGCG	1 cut(s)	1066
BstV1I	GCAGC	9 cut(s)	17, 95, 470, 566, 1020, 1202, 1327, 1354, 1355
BstV2I	GAAGAC	1 cut(s)	376
BstX2I	RGATCY	1 cut(s)	643
BstXI	CCANNNNNNTGG	1 cut(s)	1046
BstYI	RGATCY	1 cut(s)	643
Bsu36I	CCTNAGG	1 cut(s)	333
BsuI	GTATCC	1 cut(s)	906
BsuRI	GGCC	3 cut(s)	741, 972, 1391
BtsCI	GGATG	6 cut(s)	656, 660, 948, 1167, 1507, 1713
BtsI	GCAGTG	1 cut(s)	423
BtsIMutI	CAGTG	3 cut(s)	423, 1331, 1653
Cac8I	GCNNGC	6 cut(s)	18, 62, 66, 1044, 1213, 1249
CfoI	GCGC	4 cut(s)	94, 294, 1068, 1608
Cfr13I	GGNCC	2 cut(s)	1125, 1390
CseI	GACGC	1 cut(s)	1475
CsiI	ACCWGGT	1 cut(s)	162
Csp6I	GTAC	9 cut(s)	172, 327, 339, 451, 518, 693, 773, 814, 1649
CviAII	CATG	6 cut(s)	713, 784, 827, 1059, 1212, 1546
CviQI	GTAC	9 cut(s)	172, 327, 339, 451, 518, 693, 773, 814, 1649
DdeI	CTNAG	9 cut(s)	100, 197, 227, 287, 333, 1145, 1602, 1656, 1695
DpnI	GATC	6 cut(s)	215, 263, 645, 1052, 1089, 1506
DpnII	GATC	6 cut(s)	213, 261, 643, 1050, 1087, 1504
DriI	GACNNNNNGTC	1 cut(s)	1560
EaeI	YGGCCR	2 cut(s)	739, 970
Eam1104I	CTCTTC	1 cut(s)	1697
Eam1105I	GACNNNNNGTC	1 cut(s)	1560
EarI	CTCTTC	1 cut(s)	1697
Ecl136II	GAGCTC	1 cut(s)	196
Eco130I	CCWWGG	3 cut(s)	521, 870, 1079
Eco24I	GRGCYC	1 cut(s)	198
Eco47I	GGWCC	1 cut(s)	1125
Eco53kI	GAGCTC	1 cut(s)	196
Eco57I	CTGAAG	2 cut(s)	888, 1511
Eco81I	CCTNAGG	1 cut(s)	333
Eco91I	GGTNACC	1 cut(s)	1257
EcoICRI	GAGCTC	1 cut(s)	196
EcoO109I	RGGNCCY	1 cut(s)	1125
EcoO65I	GGTNACC	1 cut(s)	1257
EcoRII	CCWGG	4 cut(s)	162, 231, 1200, 1682
EcoT14I	CCWWGG	3 cut(s)	521, 870, 1079
EcoT22I	ATGCAT	2 cut(s)	832, 1720
EcoT38I	GRGCYC	1 cut(s)	198
ErhI	CCWWGG	3 cut(s)	521, 870, 1079
Esp3I	CGTCTC	1 cut(s)	1079
FaeI	CATG	6 cut(s)	716, 787, 830, 1062, 1215, 1549
FaqI	GGGAC	4 cut(s)	134, 687, 1126, 1138
FatI	CATG	6 cut(s)	712, 783, 826, 1058, 1211, 1545
FauNDI	CATATG	2 cut(s)	473, 622
FbaI	TGATCA	1 cut(s)	213
FokI	GGATG	6 cut(s)	663, 667, 955, 1174, 1514, 1720
FriOI	GRGCYC	1 cut(s)	198
FspBI	CTAG	5 cut(s)	276, 632, 647, 1208, 1380
GlaI	GCGC	4 cut(s)	93, 293, 1067, 1607
GsaI	CCCAGC	4 cut(s)	494, 942, 1042, 1050
HaeII	RGCGCY	2 cut(s)	95, 1609
HaeIII	GGCC	3 cut(s)	741, 972, 1391
HapII	CCGG	1 cut(s)	114
HgaI	GACGC	1 cut(s)	1475
HhaI	GCGC	4 cut(s)	94, 294, 1068, 1608
Hin1II	CATG	6 cut(s)	716, 787, 830, 1062, 1215, 1549
Hin6I	GCGC	4 cut(s)	92, 292, 1066, 1606
HinP1I	GCGC	4 cut(s)	92, 292, 1066, 1606
HinfI	GANTC	9 cut(s)	43, 121, 208, 356, 431, 964, 1555, 1582, 1679
HpaII	CCGG	1 cut(s)	114
HphI	GGTGA	2 cut(s)	241, 1251
Hpy166II	GTNNAC	2 cut(s)	775, 1135
Hpy188I	TCNGA	7 cut(s)	12, 200, 213, 1354, 1480, 1491, 1566
Hpy188III	TCNNGA	5 cut(s)	276, 512, 731, 991, 1015
Hpy8I	GTNNAC	2 cut(s)	775, 1135
Hpy99I	CGWCG	1 cut(s)	1390
HpyAV	CCTTC	4 cut(s)	909, 1349, 1465, 1619
HpyCH4III	ACNGT	3 cut(s)	253, 748, 1335
HpyCH4IV	ACGT	3 cut(s)	282, 1561, 1647
HpyCH4V	TGCA	9 cut(s)	428, 458, 554, 758, 787, 803, 830, 1343, 1718
HpyF10VI	GCNNNNNNNGC	4 cut(s)	89, 464, 1039, 1376
HpyF3I	CTNAG	9 cut(s)	100, 197, 227, 287, 333, 1145, 1602, 1656, 1695
HpySE526I	ACGT	3 cut(s)	282, 1561, 1647
Hsp92II	CATG	6 cut(s)	716, 787, 830, 1062, 1215, 1549
HspAI	GCGC	4 cut(s)	92, 292, 1066, 1606
KflI	GGGWCCC	1 cut(s)	1125
Ksp22I	TGATCA	1 cut(s)	213
Kzo9I	GATC	6 cut(s)	213, 261, 643, 1050, 1087, 1504
LmnI	GCTCC	2 cut(s)	193, 794
Lsp1109I	GCAGC	9 cut(s)	17, 95, 470, 566, 1020, 1202, 1327, 1354, 1355
LweI	GCATC	5 cut(s)	767, 806, 1260, 1484, 1557
MabI	ACCWGGT	1 cut(s)	162
MaeI	CTAG	5 cut(s)	276, 632, 647, 1208, 1380
MaeII	ACGT	3 cut(s)	282, 1561, 1647
MaeIII	GTNAC	2 cut(s)	247, 1257
MalI	GATC	6 cut(s)	215, 263, 645, 1052, 1089, 1506
MboI	GATC	6 cut(s)	213, 261, 643, 1050, 1087, 1504
MboII	GAAGA	9 cut(s)	235, 376, 894, 1181, 1183, 1451, 1577, 1682, 1714
MfeI	CAATTG	2 cut(s)	549, 1665
MflI	RGATCY	1 cut(s)	643
MhlI	GDGCHC	1 cut(s)	198
MlsI	TGGCCA	2 cut(s)	741, 972
MluNI	TGGCCA	2 cut(s)	741, 972
MlyI	GAGTC	3 cut(s)	37, 365, 1549
MmeI	TCCRAC	3 cut(s)	355, 895, 1448
Mox20I	TGGCCA	2 cut(s)	741, 972
Mph1103I	ATGCAT	2 cut(s)	832, 1720
MscI	TGGCCA	2 cut(s)	741, 972
MseI	TTAA	6 cut(s)	255, 315, 345, 536, 705, 1533
MslI	CAYNNNNRTG	2 cut(s)	978, 1550
Msp20I	TGGCCA	2 cut(s)	741, 972
MspI	CCGG	1 cut(s)	114
MspR9I	CCNGG	4 cut(s)	164, 233, 1202, 1684
MunI	CAATTG	2 cut(s)	549, 1665
Mva1269I	GAATGC	1 cut(s)	830
MvaI	CCWGG	4 cut(s)	164, 233, 1202, 1684
MvnI	CGCG	1 cut(s)	1066
MwoI	GCNNNNNNNGC	4 cut(s)	89, 464, 1039, 1376
NdeI	CATATG	2 cut(s)	473, 622
NdeII	GATC	6 cut(s)	213, 261, 643, 1050, 1087, 1504
NlaIII	CATG	6 cut(s)	716, 787, 830, 1062, 1215, 1549
NlaIV	GGNNCC	2 cut(s)	1126, 1127
NmuCI	GTSAC	2 cut(s)	247, 1257
NsiI	ATGCAT	2 cut(s)	832, 1720
NspI	RCATGY	2 cut(s)	1215, 1549
PaeI	GCATGC	1 cut(s)	1215
PcsI	WCGNNNNNNNCGW	1 cut(s)	38
PctI	GAATGC	1 cut(s)	830
PfeI	GAWTC	6 cut(s)	121, 208, 431, 964, 1582, 1679
PflMI	CCANNNNNTGG	1 cut(s)	626
PfoI	TCCNGGA	1 cut(s)	1682
PleI	GAGTC	3 cut(s)	37, 364, 1549
PpsI	GAGTC	3 cut(s)	37, 364, 1549
Ppu21I	YACGTR	1 cut(s)	1648
PpuMI	RGGWCCY	1 cut(s)	1125
PshBI	ATTAAT	2 cut(s)	536, 705
Psp124BI	GAGCTC	1 cut(s)	198
Psp5II	RGGWCCY	1 cut(s)	1125
Psp6I	CCWGG	4 cut(s)	162, 231, 1200, 1682
PspEI	GGTNACC	1 cut(s)	1257
PspFI	CCCAGC	4 cut(s)	490, 938, 1038, 1046
PspGI	CCWGG	4 cut(s)	162, 231, 1200, 1682
PspN4I	GGNNCC	2 cut(s)	1126, 1127
PspPI	GGNCC	2 cut(s)	1125, 1390
PspPPI	RGGWCCY	1 cut(s)	1125
PsrI	GAACNNNNNNTAC	2 cut(s)	492, 524
PstI	CTGCAG	3 cut(s)	430, 805, 1345
PsuI	RGATCY	1 cut(s)	643
RsaI	GTAC	9 cut(s)	173, 328, 340, 452, 519, 694, 774, 815, 1650
RsaNI	GTAC	9 cut(s)	172, 327, 339, 451, 518, 693, 773, 814, 1649
RseI	CAYNNNNRTG	2 cut(s)	978, 1550
SacI	GAGCTC	1 cut(s)	198
SaqAI	TTAA	6 cut(s)	255, 315, 345, 536, 705, 1533
Sau3AI	GATC	6 cut(s)	213, 261, 643, 1050, 1087, 1504
Sau96I	GGNCC	2 cut(s)	1125, 1390
SchI	GAGTC	3 cut(s)	37, 365, 1549
ScrFI	CCNGG	4 cut(s)	164, 233, 1202, 1684
SduI	GDGCHC	1 cut(s)	198
SexAI	ACCWGGT	1 cut(s)	162
SfaNI	GCATC	5 cut(s)	767, 806, 1260, 1484, 1557
SfcI	CTRYAG	4 cut(s)	426, 801, 954, 1341
SinI	GGWCC	1 cut(s)	1125
SmiMI	CAYNNNNRTG	2 cut(s)	978, 1550
SmlI	CTYRAG	3 cut(s)	125, 1008, 1403
SmoI	CTYRAG	3 cut(s)	125, 1008, 1403
SphI	GCATGC	1 cut(s)	1215
SsiI	CCGC	5 cut(s)	222, 236, 683, 1064, 1400
SspI	AATATT	2 cut(s)	709, 1294
SspMI	CTAG	5 cut(s)	276, 632, 647, 1208, 1380
SstI	GAGCTC	1 cut(s)	198
StyD4I	CCNGG	4 cut(s)	162, 231, 1200, 1682
StyI	CCWWGG	3 cut(s)	521, 870, 1079
TaaI	ACNGT	3 cut(s)	253, 748, 1335
TaiI	ACGT	3 cut(s)	285, 1564, 1650
TaqI	TCGA	5 cut(s)	41, 206, 398, 1086, 1462
TatI	WGTACW	4 cut(s)	450, 692, 772, 813
TauI	GCSGC	2 cut(s)	224, 239
TfiI	GAWTC	6 cut(s)	121, 208, 431, 964, 1582, 1679
Tru1I	TTAA	6 cut(s)	255, 315, 345, 536, 705, 1533
Tru9I	TTAA	6 cut(s)	255, 315, 345, 536, 705, 1533
TscAI	CASTG	3 cut(s)	430, 1338, 1660
TseFI	GTSAC	2 cut(s)	247, 1257
TseI	GCWGC	9 cut(s)	5, 83, 458, 554, 1033, 1215, 1340, 1343, 1367
Tsp45I	GTSAC	2 cut(s)	247, 1257
TspDTI	ATGAA	3 cut(s)	701, 1452, 1715
TspGWI	ACGGA	1 cut(s)	136
TspRI	CASTG	3 cut(s)	430, 1338, 1660
Van91I	CCANNNNNTGG	1 cut(s)	626
VpaK11BI	GGWCC	1 cut(s)	1125
VspI	ATTAAT	2 cut(s)	536, 705
XapI	RAATTY	1 cut(s)	202
XbaI	TCTAGA	1 cut(s)	275
XceI	RCATGY	2 cut(s)	1215, 1549
XcmI	CCANNNNNNNNNTGG	1 cut(s)	478
XspI	CTAG	5 cut(s)	276, 632, 647, 1208, 1380
Zsp2I	ATGCAT	2 cut(s)	832, 1720

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.