Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3A

Orthogroup ID

OG0005009

Physical Location & Seq

Genomic Coordinates Reverse (-)

29049370 .. 29057322

Gene Structure 7953 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3AG261100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1332 bp

ATGCATATCACTAATACCTGGGTCCCAAACAAGATTGAGCAGGAGCTCAGAAATTCGATTCTGATCAATGCCGCCCTCAGCCTCGCGGCGTTCTTCGTCACCGTTAAGATGATCCCTGTGGCTTCTAGATACGTTCTCAGGCGCAATCTGTTTGGCTACGATATTAACAAAAAGGGTACTCCTCAGGGTACTATTAAAGTGCCAGAGTCGTTGGGCATTGTTGTTGGAATTGTCTTCTTGGTCTTTTCGATATTATTTCAGTATTTCAACTTCACTGCAGATTCAAATTGGCTTGTTGAGTACAATGCAGCATTAGCCTCCATATGCTTTATGGTATTGCTGGGATTTGTAGATGATGTTCTTGATGGAGAGTCTTTACCTCTGCTGATGGCTTATGCTGGACATACAACTATTATCATACCAAAGCCTCTTGTTCCATATGTTGGGCTACAGGTCTGGGATCTAGGATGGATGTATAAACTATATATGGGACTTTTGGCGGTTTTCTGTACAAACTCAATTAATATTCATGCTGGATTGAATGGTCTTGAAGTTGGCCAGACAGTTGTAATTGCATCTGCTATTTTAATACACAATATCATGCAAATTGGAGCATCTGTAGATTTTGAGTACAAGATGGCACACGCATTCTCTATATATCTTGCCCAACCCTTACTGGCAACCTCCTTGGCATTGTTCTCTTACAACTGGTATCCTTCTTCAGCTTTTGTTGGAGATACTTACACATACTTTGCTGGGATGACTATGGCTGTAGTTGGGATTCTTGGCCATTTTAGTGAAACGCTCCTGATTTTCTTTCTCCCTCAAGTCTTGAACTTTCTCTTGTCACTGCCCCAGCTTGCTGGGATCATTCCATGTCCGCGCCATCGTCTCCCAAGGTTCGATCCTGAAACTGGACTGCTGACTGGGACAAATGATGGGACACTTGTAAACTTGTTCCTAAGACAATTTGGCAGGATGACAGAGAAGAAACTTTGTGTTTATCTTCTCGTTTTCCAGGCTCTAGCATGCTGCTTCTGTTTCCTGTTGAGATACTTCCTTGCTGGTCGAAGTTGGAAGGCATCTGAACTGCGTCTGAAGTCCTGGGATGATCTCAATAAGCTATGGTTTGTCCTGCTTAAAGAGAAAAACATGCTGATGACTCAACGTCAGATGCTTCACGCACAGAATCTTCGTTTTCCTAATCCTGAGCGCCTTCCCAAAGTGAGGAAGTCAATGTGTCGTATCAAGCACGTACTCACTGAGAGAGCAATTGAAGAACCCGATTCCAGGAGGTCTGCTAAGATGAAGAGGATGATAAATGCGTTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003975 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0006464 GO:0006486 GO:0006487 GO:0006488 GO:0006489 GO:0006490 GO:0006629 GO:0006644 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0008610 GO:0008654 GO:0009058 GO:0009059 GO:0009100 GO:0009101 GO:0009987 GO:0012505 GO:0016020 GO:0016021 GO:0016740 GO:0016772 GO:0016780 GO:0019538 GO:0019637 GO:0031224 GO:0031984 GO:0034645 GO:0036211 GO:0042175 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043413 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0046465 GO:0070085 GO:0071704 GO:0090407 GO:0098827 GO:1901135 GO:1901137 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00510 ko01100 map00510 map01100

Pfam Domains

Protein Families

Glycos_transf_4

Protein Analysis

443

Amino Acids

50.22

Weight (kDa)

9.28

Isoelectric Point (pI)

41.1

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glycos_transf_4	PF00953	104 - 263	1.1e-18	Glycosyl transferase family 4
MRP-L47	PF06984	355 - 423	1.8e-28	Mitochondrial 39-S ribosomal protein L47 (MRP-L47)
Ribosomal_L29	PF00831	362 - 423	4.6e-08	Ribosomal L29 protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005009)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G41490 AT3G57220
fragaria_vesca	FvH4_6g24760 FvH4_6g24760 FvH4_6g24760 FvH4_6g24760 FvH4_6g24760
malus_domestica	MD12G1086200.v1.1 MD14G1080600.v1.1
prunus_persica	Prupe.1G032300_v2.0.a1 Prupe.7G050100_v2.0.a1
pyrus_communis	pycom12g07300 pycom14g06990
rosa_chinensis	RchiOBHm_Chr3g0484361 RchiOBHm_Chr3g0484421 RchiOBHm_Chr3g0484511
rosa_laevigata	RLG00000023230
rosa_multiflora	Rmu_sc0002910.1_g000009
rosa_roxburghii	Rroxscaffold_6G00397750
rosa_rugosa	Rorug03G0211000 Rorug03G0211100 Rorug03G0211200
rosa_samantha	Rh3AG260100 Rh3AG260600 Rh3AG261100 Rh3AG261800 Rh3BG296800 Rh3CG294300 Rh3DG290400
rosa_wichuraiana	Rw3G023470

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	443
AccII	CGCG	2 cut(s)	86, 883
AciI	CCGC	4 cut(s)	72, 86, 500, 881
AclWI	GGATC	4 cut(s)	106, 468, 875, 899
AcoI	YGGCCR	2 cut(s)	556, 787
AcsI	RAATTY	1 cut(s)	52
AcuI	CTGAAG	2 cut(s)	705, 1118
AfaI	GTAC	6 cut(s)	178, 190, 302, 511, 632, 1257
AfiI	CCNNNNNNNGG	4 cut(s)	443, 914, 1227, 1290
AgsI	TTSAA	6 cut(s)	268, 285, 541, 551, 835, 1277
AhdI	GACNNNNNGTC	1 cut(s)	1167
AjnI	CCWGG	4 cut(s)	17, 1017, 1103, 1289
AluBI	AGCT	4 cut(s)	46, 725, 859, 1123
AluI	AGCT	4 cut(s)	46, 725, 859, 1123
Alw21I	GWGCWC	1 cut(s)	48
Alw26I	GTCTC	1 cut(s)	896
AlwI	GGATC	4 cut(s)	106, 468, 875, 899
AoxI	GGCC	2 cut(s)	556, 787
ApeKI	GCWGC	2 cut(s)	308, 1032
ApoI	RAATTY	1 cut(s)	52
AseI	ATTAAT	1 cut(s)	522
AspLEI	GCGC	3 cut(s)	144, 885, 1215
AspS9I	GGNCC	1 cut(s)	22
AsuHPI	GGTGA	1 cut(s)	91
AvaII	GGWCC	1 cut(s)	22
AxyI	CCTNAGG	1 cut(s)	183
BalI	TGGCCA	2 cut(s)	558, 789
BanII	GRGCYC	1 cut(s)	48
BarI	GAAGNNNNNNTAC	2 cut(s)	254, 286
BbsI	GAAGAC	1 cut(s)	226
Bbv12I	GWGCWC	1 cut(s)	48
BbvCI	CCTCAGC	1 cut(s)	77
BbvI	GCAGC	2 cut(s)	320, 1019
BccI	CCATC	6 cut(s)	359, 382, 462, 631, 894, 932
BciT130I	CCWGG	4 cut(s)	19, 1019, 1105, 1291
BciVI	GTATCC	1 cut(s)	723
BclI	TGATCA	1 cut(s)	63
BcoDI	GTCTC	1 cut(s)	896
BfaI	CTAG	3 cut(s)	126, 464, 1025
BfmI	CTRYAG	4 cut(s)	276, 449, 618, 771
BfoI	RGCGCY	1 cut(s)	1216
BfuI	GTATCC	1 cut(s)	723
BisI	GCNGC	4 cut(s)	72, 87, 309, 1033
BlsI	GCNGC	4 cut(s)	73, 88, 310, 1034
Bme1390I	CCNGG	4 cut(s)	19, 1019, 1105, 1291
Bme18I	GGWCC	1 cut(s)	22
BmeRI	GACNNNNNGTC	1 cut(s)	1167
BmgT120I	GGNCC	1 cut(s)	22
BmiI	GGNNCC	2 cut(s)	23, 24
BmrFI	CCNGG	4 cut(s)	19, 1019, 1105, 1291
BmrI	ACTGGG	1 cut(s)	936
BmsI	GCATC	4 cut(s)	584, 623, 1091, 1164
BmuI	ACTGGG	1 cut(s)	936
BpiI	GAAGAC	1 cut(s)	226
Bpu10I	CCTNAGC	2 cut(s)	77, 1209
BpuEI	CTTGAG	1 cut(s)	810
BsaAI	YACGTR	1 cut(s)	1255
BsaBI	GATNNNNATC	1 cut(s)	62
BsaJI	CCNNGG	4 cut(s)	18, 687, 896, 1104
BsaXI	ACNNNNNCTCC	2 cut(s)	603, 633
Bsc4I	CCNNNNNNNGG	4 cut(s)	443, 914, 1227, 1290
Bse1I	ACTGG	4 cut(s)	681, 713, 919, 931
Bse21I	CCTNAGG	1 cut(s)	183
Bse8I	GATNNNNATC	1 cut(s)	62
BseBI	CCWGG	4 cut(s)	19, 1019, 1105, 1291
BseDI	CCNNGG	4 cut(s)	18, 687, 896, 1104
BseGI	GGATG	6 cut(s)	473, 477, 765, 984, 1114, 1320
BseJI	GATNNNNATC	1 cut(s)	62
BseLI	CCNNNNNNNGG	4 cut(s)	443, 914, 1227, 1290
BseMII	CTCAG	6 cut(s)	61, 91, 151, 197, 1200, 1254
BseNI	ACTGG	4 cut(s)	681, 713, 919, 931
BseRI	GAGGAG	1 cut(s)	171
BseXI	GCAGC	2 cut(s)	320, 1019
BseYI	CCCAGC	4 cut(s)	340, 755, 855, 863
Bsh1236I	CGCG	2 cut(s)	86, 883
BshFI	GGCC	2 cut(s)	558, 789
BsiHKAI	GWGCWC	1 cut(s)	48
BslFI	GGGAC	4 cut(s)	8, 504, 943, 955
BslI	CCNNNNNNNGG	4 cut(s)	443, 914, 1227, 1290
BsmAI	GTCTC	1 cut(s)	896
BsmBI	CGTCTC	1 cut(s)	896
BsmFI	GGGAC	4 cut(s)	8, 504, 943, 955
BsmI	GAATGC	1 cut(s)	647
BsnI	GGCC	2 cut(s)	558, 789
Bsp1286I	GDGCHC	1 cut(s)	48
Bsp1407I	TGTACA	1 cut(s)	509
Bsp143I	GATC	6 cut(s)	63, 111, 460, 867, 904, 1111
BspACI	CCGC	4 cut(s)	72, 86, 500, 881
BspANI	GGCC	2 cut(s)	558, 789
BspCNI	CTCAG	6 cut(s)	60, 90, 150, 196, 1201, 1255
BspFNI	CGCG	2 cut(s)	86, 883
BspLI	GGNNCC	2 cut(s)	23, 24
BspMAI	CTGCAG	1 cut(s)	280
BspPI	GGATC	4 cut(s)	106, 468, 875, 899
BsrGI	TGTACA	1 cut(s)	509
BsrI	ACTGG	4 cut(s)	681, 713, 919, 931
BssECI	CCNNGG	4 cut(s)	18, 687, 896, 1104
BssMI	GATC	6 cut(s)	63, 111, 460, 867, 904, 1111
BssT1I	CCWWGG	2 cut(s)	687, 896
Bst2UI	CCWGG	4 cut(s)	19, 1019, 1105, 1291
Bst4CI	ACNGT	2 cut(s)	103, 565
Bst6I	CTCTTC	1 cut(s)	1304
BstAUI	TGTACA	1 cut(s)	509
BstBAI	YACGTR	1 cut(s)	1255
BstC8I	GCNNGC	2 cut(s)	861, 1030
BstDEI	CTNAG	8 cut(s)	47, 77, 137, 183, 962, 1209, 1263, 1302
BstF5I	GGATG	6 cut(s)	473, 477, 765, 984, 1114, 1320
BstFNI	CGCG	2 cut(s)	86, 883
BstH2I	RGCGCY	1 cut(s)	1216
BstHHI	GCGC	3 cut(s)	144, 885, 1215
BstKTI	GATC	6 cut(s)	66, 114, 463, 870, 907, 1114
BstMAI	GTCTC	1 cut(s)	896
BstMBI	GATC	6 cut(s)	63, 111, 460, 867, 904, 1111
BstMWI	GCNNNNNNNGC	1 cut(s)	314
BstNI	CCWGG	4 cut(s)	19, 1019, 1105, 1291
BstNSI	RCATGY	2 cut(s)	1032, 1156
BstSCI	CCNGG	4 cut(s)	17, 1017, 1103, 1289
BstSFI	CTRYAG	4 cut(s)	276, 449, 618, 771
BstUI	CGCG	2 cut(s)	86, 883
BstV1I	GCAGC	2 cut(s)	320, 1019
BstV2I	GAAGAC	1 cut(s)	226
BstX2I	RGATCY	1 cut(s)	460
BstXI	CCANNNNNNTGG	1 cut(s)	863
BstYI	RGATCY	1 cut(s)	460
Bsu36I	CCTNAGG	1 cut(s)	183
BsuI	GTATCC	1 cut(s)	723
BsuRI	GGCC	2 cut(s)	558, 789
BtsCI	GGATG	6 cut(s)	473, 477, 765, 984, 1114, 1320
BtsI	GCAGTG	2 cut(s)	273, 848
BtsIMutI	CAGTG	3 cut(s)	273, 848, 1260
Cac8I	GCNNGC	2 cut(s)	861, 1030
CfoI	GCGC	3 cut(s)	144, 885, 1215
Cfr13I	GGNCC	1 cut(s)	22
CseI	GACGC	1 cut(s)	1082
Csp6I	GTAC	6 cut(s)	177, 189, 301, 510, 631, 1256
CviAII	CATG	5 cut(s)	530, 601, 876, 1029, 1153
CviQI	GTAC	6 cut(s)	177, 189, 301, 510, 631, 1256
DdeI	CTNAG	8 cut(s)	47, 77, 137, 183, 962, 1209, 1263, 1302
DpnI	GATC	6 cut(s)	65, 113, 462, 869, 906, 1113
DpnII	GATC	6 cut(s)	63, 111, 460, 867, 904, 1111
DriI	GACNNNNNGTC	1 cut(s)	1167
EaeI	YGGCCR	2 cut(s)	556, 787
Eam1104I	CTCTTC	1 cut(s)	1304
Eam1105I	GACNNNNNGTC	1 cut(s)	1167
EarI	CTCTTC	1 cut(s)	1304
Ecl136II	GAGCTC	1 cut(s)	46
Eco130I	CCWWGG	2 cut(s)	687, 896
Eco24I	GRGCYC	1 cut(s)	48
Eco47I	GGWCC	1 cut(s)	22
Eco53kI	GAGCTC	1 cut(s)	46
Eco57I	CTGAAG	2 cut(s)	705, 1118
Eco81I	CCTNAGG	1 cut(s)	183
EcoICRI	GAGCTC	1 cut(s)	46
EcoO109I	RGGNCCY	1 cut(s)	22
EcoRII	CCWGG	4 cut(s)	17, 1017, 1103, 1289
EcoT14I	CCWWGG	2 cut(s)	687, 896
EcoT22I	ATGCAT	1 cut(s)	6
EcoT38I	GRGCYC	1 cut(s)	48
ErhI	CCWWGG	2 cut(s)	687, 896
Esp3I	CGTCTC	1 cut(s)	896
FaeI	CATG	5 cut(s)	533, 604, 879, 1032, 1156
FaqI	GGGAC	4 cut(s)	8, 504, 943, 955
FatI	CATG	5 cut(s)	529, 600, 875, 1028, 1152
FauNDI	CATATG	2 cut(s)	323, 439
FbaI	TGATCA	1 cut(s)	63
Fnu4HI	GCNGC	4 cut(s)	72, 87, 309, 1033
FokI	GGATG	6 cut(s)	480, 484, 772, 991, 1121, 1327
FriOI	GRGCYC	1 cut(s)	48
Fsp4HI	GCNGC	4 cut(s)	72, 87, 309, 1033
FspBI	CTAG	3 cut(s)	126, 464, 1025
GlaI	GCGC	3 cut(s)	143, 884, 1214
GluI	GCNGC	4 cut(s)	72, 87, 309, 1033
GsaI	CCCAGC	4 cut(s)	344, 759, 859, 867
HaeII	RGCGCY	1 cut(s)	1216
HaeIII	GGCC	2 cut(s)	558, 789
HgaI	GACGC	1 cut(s)	1082
HhaI	GCGC	3 cut(s)	144, 885, 1215
Hin1II	CATG	5 cut(s)	533, 604, 879, 1032, 1156
Hin6I	GCGC	3 cut(s)	142, 883, 1213
HinP1I	GCGC	3 cut(s)	142, 883, 1213
HinfI	GANTC	8 cut(s)	58, 206, 281, 371, 781, 1162, 1189, 1286
HphI	GGTGA	1 cut(s)	91
Hpy166II	GTNNAC	1 cut(s)	952
Hpy188I	TCNGA	5 cut(s)	50, 63, 1087, 1098, 1173
Hpy188III	TCNNGA	7 cut(s)	126, 362, 548, 808, 832, 908, 1208
Hpy8I	GTNNAC	1 cut(s)	952
HpyAV	CCTTC	3 cut(s)	726, 1072, 1226
HpyCH4III	ACNGT	2 cut(s)	103, 565
HpyCH4IV	ACGT	3 cut(s)	132, 1168, 1254
HpyCH4V	TGCA	5 cut(s)	4, 278, 308, 575, 604
HpyF10VI	GCNNNNNNNGC	1 cut(s)	314
HpyF3I	CTNAG	8 cut(s)	47, 77, 137, 183, 962, 1209, 1263, 1302
HpySE526I	ACGT	3 cut(s)	132, 1168, 1254
Hsp92II	CATG	5 cut(s)	533, 604, 879, 1032, 1156
HspAI	GCGC	3 cut(s)	142, 883, 1213
KflI	GGGWCCC	1 cut(s)	22
Ksp22I	TGATCA	1 cut(s)	63
Kzo9I	GATC	6 cut(s)	63, 111, 460, 867, 904, 1111
LmnI	GCTCC	3 cut(s)	43, 611, 810
Lsp1109I	GCAGC	2 cut(s)	320, 1019
LweI	GCATC	4 cut(s)	584, 623, 1091, 1164
MaeI	CTAG	3 cut(s)	126, 464, 1025
MaeII	ACGT	3 cut(s)	132, 1168, 1254
MaeIII	GTNAC	2 cut(s)	97, 846
MalI	GATC	6 cut(s)	65, 113, 462, 869, 906, 1113
MboI	GATC	6 cut(s)	63, 111, 460, 867, 904, 1111
MboII	GAAGA	8 cut(s)	85, 226, 711, 998, 1000, 1184, 1289, 1321
MfeI	CAATTG	1 cut(s)	1272
MflI	RGATCY	1 cut(s)	460
MhlI	GDGCHC	1 cut(s)	48
MlsI	TGGCCA	2 cut(s)	558, 789
MluCI	AATT	8 cut(s)	52, 228, 286, 519, 570, 606, 968, 1272
MluNI	TGGCCA	2 cut(s)	558, 789
MlyI	GAGTC	3 cut(s)	215, 380, 1156
MmeI	TCCRAC	3 cut(s)	205, 712, 1055
Mox20I	TGGCCA	2 cut(s)	558, 789
Mph1103I	ATGCAT	1 cut(s)	6
MscI	TGGCCA	2 cut(s)	558, 789
MseI	TTAA	6 cut(s)	105, 165, 195, 522, 587, 1140
MslI	CAYNNNNRTG	2 cut(s)	795, 1157
Msp20I	TGGCCA	2 cut(s)	558, 789
MspR9I	CCNGG	4 cut(s)	19, 1019, 1105, 1291
MunI	CAATTG	1 cut(s)	1272
Mva1269I	GAATGC	1 cut(s)	647
MvaI	CCWGG	4 cut(s)	19, 1019, 1105, 1291
MvnI	CGCG	2 cut(s)	86, 883
MwoI	GCNNNNNNNGC	1 cut(s)	314
NdeI	CATATG	2 cut(s)	323, 439
NdeII	GATC	6 cut(s)	63, 111, 460, 867, 904, 1111
NlaIII	CATG	5 cut(s)	533, 604, 879, 1032, 1156
NlaIV	GGNNCC	2 cut(s)	23, 24
NmuCI	GTSAC	2 cut(s)	97, 846
NsiI	ATGCAT	1 cut(s)	6
NspI	RCATGY	2 cut(s)	1032, 1156
PaeI	GCATGC	1 cut(s)	1032
PctI	GAATGC	1 cut(s)	647
PfeI	GAWTC	5 cut(s)	58, 281, 781, 1189, 1286
PflMI	CCANNNNNTGG	1 cut(s)	443
PfoI	TCCNGGA	1 cut(s)	1289
PkrI	GCNGC	4 cut(s)	73, 88, 310, 1034
PleI	GAGTC	3 cut(s)	214, 379, 1156
PpsI	GAGTC	3 cut(s)	214, 379, 1156
Ppu21I	YACGTR	1 cut(s)	1255
PpuMI	RGGWCCY	1 cut(s)	22
PshBI	ATTAAT	1 cut(s)	522
Psp124BI	GAGCTC	1 cut(s)	48
Psp5II	RGGWCCY	1 cut(s)	22
Psp6I	CCWGG	4 cut(s)	17, 1017, 1103, 1289
PspFI	CCCAGC	4 cut(s)	340, 755, 855, 863
PspGI	CCWGG	4 cut(s)	17, 1017, 1103, 1289
PspN4I	GGNNCC	2 cut(s)	23, 24
PspPI	GGNCC	1 cut(s)	22
PspPPI	RGGWCCY	1 cut(s)	22
PsrI	GAACNNNNNNTAC	2 cut(s)	342, 374
PstI	CTGCAG	1 cut(s)	280
PsuI	RGATCY	1 cut(s)	460
RsaI	GTAC	6 cut(s)	178, 190, 302, 511, 632, 1257
RsaNI	GTAC	6 cut(s)	177, 189, 301, 510, 631, 1256
RseI	CAYNNNNRTG	2 cut(s)	795, 1157
SacI	GAGCTC	1 cut(s)	48
SaqAI	TTAA	6 cut(s)	105, 165, 195, 522, 587, 1140
SatI	GCNGC	4 cut(s)	72, 87, 309, 1033
Sau3AI	GATC	6 cut(s)	63, 111, 460, 867, 904, 1111
Sau96I	GGNCC	1 cut(s)	22
SchI	GAGTC	3 cut(s)	215, 380, 1156
ScrFI	CCNGG	4 cut(s)	19, 1019, 1105, 1291
SduI	GDGCHC	1 cut(s)	48
SfaNI	GCATC	4 cut(s)	584, 623, 1091, 1164
SfcI	CTRYAG	4 cut(s)	276, 449, 618, 771
SinI	GGWCC	1 cut(s)	22
SmiMI	CAYNNNNRTG	2 cut(s)	795, 1157
SmlI	CTYRAG	1 cut(s)	825
SmoI	CTYRAG	1 cut(s)	825
SphI	GCATGC	1 cut(s)	1032
Sse9I	AATT	8 cut(s)	52, 228, 286, 519, 570, 606, 968, 1272
SsiI	CCGC	4 cut(s)	72, 86, 500, 881
SspI	AATATT	1 cut(s)	526
SspMI	CTAG	3 cut(s)	126, 464, 1025
SstI	GAGCTC	1 cut(s)	48
StyD4I	CCNGG	4 cut(s)	17, 1017, 1103, 1289
StyI	CCWWGG	2 cut(s)	687, 896
TaaI	ACNGT	2 cut(s)	103, 565
TaiI	ACGT	3 cut(s)	135, 1171, 1257
TaqI	TCGA	4 cut(s)	56, 248, 903, 1069
TasI	AATT	8 cut(s)	52, 228, 286, 519, 570, 606, 968, 1272
TatI	WGTACW	3 cut(s)	300, 509, 630
TauI	GCSGC	2 cut(s)	74, 89
TfiI	GAWTC	5 cut(s)	58, 281, 781, 1189, 1286
Tru1I	TTAA	6 cut(s)	105, 165, 195, 522, 587, 1140
Tru9I	TTAA	6 cut(s)	105, 165, 195, 522, 587, 1140
TscAI	CASTG	3 cut(s)	280, 855, 1267
TseFI	GTSAC	2 cut(s)	97, 846
TseI	GCWGC	2 cut(s)	308, 1032
Tsp45I	GTSAC	2 cut(s)	97, 846
TspDTI	ATGAA	2 cut(s)	518, 1322
TspRI	CASTG	3 cut(s)	280, 855, 1267
Van91I	CCANNNNNTGG	1 cut(s)	443
VpaK11BI	GGWCC	1 cut(s)	22
VspI	ATTAAT	1 cut(s)	522
XapI	RAATTY	1 cut(s)	52
XbaI	TCTAGA	1 cut(s)	125
XceI	RCATGY	2 cut(s)	1032, 1156
XcmI	CCANNNNNNNNNTGG	1 cut(s)	328
XspI	CTAG	3 cut(s)	126, 464, 1025
Zsp2I	ATGCAT	1 cut(s)	6

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.