Rh3AG261800

UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase-like

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3A
Physical Location & Seq
Reverse (-)
29114932 .. 29123163
8232 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3AG261800.1

Sequence Viewer

Length: 1272 bp
ATGGCAGCTCGGAAGCGAGCTTCAACAAACTCGTCCTCCTCGACTCAAACCAAACCAAGCGATCGCGAGCCACCCAAAACCCAAGAAGCAGCAGCAGAAGCGCCAATCTCAGCACCCAAGTCTGGTGTGATTCTGAAGCTGACGGCGTTGTTCTCCGTCCCCTACTTTTACCTGGTCTTGTACCATTACAAGATTGAGCAGGAGCTCAGAAATTCGATTCTGATCAATGCCGCCCTCAGCCTCGCGGCGTTCTTCGTCACCGTTAAGATGATCCCTGTGGCTTCTAGATACGTTCTCAGGCGCAATCTGTTTGGCTACGATATTAACAAAAAGGGTACTCCTCAGGGTACTATTAAAGTGCCAGAGTCGTTGGGCATTGTTGTTGGAATTGTCTTCTTGGTCTTTTCGATATTATTTCAGTATTTCAACTTCACTGCAGATTCAAATTGGCTTGTTGAGTACAATGCAGCATTAGCCTCCATATGCTTTATGGTATTGCTGGGATTTGTAGATGATGTTCTTGATGGAGAGTCTTTACCTCTGCTGGTGGCTTATGCTGGACATACAACTATTATCATACCAAAGCCTCTTGTTCCATATGTTGGGCTAGAGGTCTGGGATCTAGGATGGATGTATAAACTATATATGGGACTTTTGGCGGTTTTCTGTACAAACTCAATTAATATTCATGCTGGATTGAATGGTCTTGAAGTTGGCCAGACAGTTGTAATTGCATCTGCTATTTTAATACACAATATCATGCAAATTGGAGCATCTGTAGATTTTGAGTACAAGATGGCACACGCATTCTCTATATATCTTGCCCAACCCTTACTGGCAACCTCCTTGGCATTGTTCTCTTACAACTGGTATCCTTCTTCAGCTTTTGTTGGAGATACTTACACATACTTTGCTGGGATGACTATGGCTGTAGTTGGGATTCTTGGCCATTTTAGTGAAACGCTCCTGATTTTCTTTCTCCCTCAAGTCTTGAACTTTCTCTTGTCGCTGCCCCAGCTTGCTGGGATCATTCCATGTCCGCGCCATCGTCTCCCAAGGTTCGATCCTGAAACTGGACTGCTGACTGGGACAAATGATGGGACGCTTGTAAACTTGTTCCTAAGACAATTTGGCAGGATGACAGAGAAGAAACTTTGTGTTTATCTTCTCGTTTTCCAGTCTCTACAGTCTCTGCTTGCCTTTGACCCAGTTTCATTCTCATCCAAGCTTAACACAAATATCATGTTTACAAACCGAGCCACTAAAGCATAA

Protein Analysis

423

Amino Acids

46.79

Weight (kDa)

8.7

Isoelectric Point (pI)

37.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glycos_transf_4 PF00953 157 - 316 9.8e-19 Glycosyl transferase family 4
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 602
AccII CGCG 3 cut(s) 66, 245, 1042
AciI CCGC 4 cut(s) 231, 245, 659, 1040
AclWI GGATC 4 cut(s) 265, 627, 1034, 1058
AcoI YGGCCR 2 cut(s) 715, 946
AcsI RAATTY 1 cut(s) 211
AcuI CTGAAG 2 cut(s) 155, 864
AfaI GTAC 6 cut(s) 182, 337, 349, 461, 670, 791
AfiI CCNNNNNNNGG 3 cut(s) 122, 602, 1073
AgsI TTSAA 6 cut(s) 24, 427, 444, 700, 710, 994
AjnI CCWGG 1 cut(s) 171
AluBI AGCT 7 cut(s) 8, 20, 139, 205, 884, 1018, 1228
AluI AGCT 7 cut(s) 8, 20, 139, 205, 884, 1018, 1228
Alw21I GWGCWC 1 cut(s) 207
Alw26I GTCTC 3 cut(s) 1055, 1185, 1194
AlwI GGATC 4 cut(s) 265, 627, 1034, 1058
AlwNI CAGNNNCTG 1 cut(s) 1192
AoxI GGCC 2 cut(s) 715, 946
ApeKI GCWGC 5 cut(s) 5, 89, 92, 467, 1009
ApoI RAATTY 1 cut(s) 211
AseI ATTAAT 1 cut(s) 681
AsiSI GCGATCGC 1 cut(s) 64
AspLEI GCGC 3 cut(s) 103, 303, 1044
AsuHPI GGTGA 1 cut(s) 250
AxyI CCTNAGG 1 cut(s) 342
BalI TGGCCA 2 cut(s) 717, 948
BanII GRGCYC 1 cut(s) 207
BarI GAAGNNNNNNTAC 2 cut(s) 413, 445
BbsI GAAGAC 1 cut(s) 385
Bbv12I GWGCWC 1 cut(s) 207
BbvCI CCTCAGC 1 cut(s) 236
BbvI GCAGC 5 cut(s) 17, 101, 104, 479, 996
BccI CCATC 5 cut(s) 518, 621, 790, 1053, 1091
BceAI ACGGC 1 cut(s) 159
BciT130I CCWGG 1 cut(s) 173
BciVI GTATCC 1 cut(s) 882
BclI TGATCA 1 cut(s) 222
BcoDI GTCTC 3 cut(s) 1055, 1185, 1194
BfaI CTAG 3 cut(s) 285, 608, 623
BfmI CTRYAG 4 cut(s) 435, 777, 930, 1184
BfoI RGCGCY 1 cut(s) 104
BfuI GTATCC 1 cut(s) 882
BisI GCNGC 7 cut(s) 6, 90, 93, 231, 246, 468, 1010
BlsI GCNGC 7 cut(s) 7, 91, 94, 232, 247, 469, 1011
Bme1390I CCNGG 1 cut(s) 173
BmrFI CCNGG 1 cut(s) 173
BmrI ACTGGG 2 cut(s) 1095, 1202
BmsI GCATC 2 cut(s) 743, 782
BmuI ACTGGG 2 cut(s) 1095, 1202
BpiI GAAGAC 1 cut(s) 385
Bpu10I CCTNAGC 1 cut(s) 236
BpuEI CTTGAG 1 cut(s) 969
BsaBI GATNNNNATC 1 cut(s) 221
BsaJI CCNNGG 2 cut(s) 846, 1055
BsaXI ACNNNNNCTCC 4 cut(s) 20, 50, 762, 792
Bsc4I CCNNNNNNNGG 3 cut(s) 122, 602, 1073
Bse1I ACTGG 6 cut(s) 840, 872, 1078, 1090, 1177, 1208
Bse21I CCTNAGG 1 cut(s) 342
Bse8I GATNNNNATC 1 cut(s) 221
BseBI CCWGG 1 cut(s) 173
BseDI CCNNGG 2 cut(s) 846, 1055
BseGI GGATG 5 cut(s) 632, 636, 924, 1143, 1220
BseJI GATNNNNATC 1 cut(s) 221
BseLI CCNNNNNNNGG 3 cut(s) 122, 602, 1073
BseMII CTCAG 5 cut(s) 123, 220, 250, 310, 356
BseNI ACTGG 6 cut(s) 840, 872, 1078, 1090, 1177, 1208
BseRI GAGGAG 2 cut(s) 28, 330
BseXI GCAGC 5 cut(s) 17, 101, 104, 479, 996
BseYI CCCAGC 4 cut(s) 499, 914, 1014, 1022
Bsh1236I CGCG 3 cut(s) 66, 245, 1042
Bsh1285I CGRYCG 1 cut(s) 64
BshFI GGCC 2 cut(s) 717, 948
BsiEI CGRYCG 1 cut(s) 64
BsiHKAI GWGCWC 1 cut(s) 207
BslFI GGGAC 4 cut(s) 143, 663, 1102, 1114
BslI CCNNNNNNNGG 3 cut(s) 122, 602, 1073
BsmAI GTCTC 3 cut(s) 1055, 1185, 1194
BsmBI CGTCTC 1 cut(s) 1055
BsmFI GGGAC 4 cut(s) 143, 663, 1102, 1114
BsmI GAATGC 1 cut(s) 806
BsnI GGCC 2 cut(s) 717, 948
Bsp1286I GDGCHC 1 cut(s) 207
Bsp1407I TGTACA 1 cut(s) 668
Bsp143I GATC 6 cut(s) 61, 222, 270, 619, 1026, 1063
Bsp68I TCGCGA 1 cut(s) 66
BspACI CCGC 4 cut(s) 231, 245, 659, 1040
BspANI GGCC 2 cut(s) 717, 948
BspCNI CTCAG 5 cut(s) 122, 219, 249, 309, 355
BspFNI CGCG 3 cut(s) 66, 245, 1042
BspMAI CTGCAG 1 cut(s) 439
BspPI GGATC 4 cut(s) 265, 627, 1034, 1058
BsrGI TGTACA 1 cut(s) 668
BsrI ACTGG 6 cut(s) 840, 872, 1078, 1090, 1177, 1208
BssECI CCNNGG 2 cut(s) 846, 1055
BssMI GATC 6 cut(s) 61, 222, 270, 619, 1026, 1063
BssT1I CCWWGG 2 cut(s) 846, 1055
Bst2UI CCWGG 1 cut(s) 173
Bst4CI ACNGT 3 cut(s) 262, 724, 1188
BstAUI TGTACA 1 cut(s) 668
BstC8I GCNNGC 4 cut(s) 18, 68, 1020, 1197
BstDEI CTNAG 6 cut(s) 109, 206, 236, 296, 342, 1121
BstF5I GGATG 5 cut(s) 632, 636, 924, 1143, 1220
BstFNI CGCG 3 cut(s) 66, 245, 1042
BstH2I RGCGCY 1 cut(s) 104
BstHHI GCGC 3 cut(s) 103, 303, 1044
BstKTI GATC 6 cut(s) 64, 225, 273, 622, 1029, 1066
BstMAI GTCTC 3 cut(s) 1055, 1185, 1194
BstMBI GATC 6 cut(s) 61, 222, 270, 619, 1026, 1063
BstMCI CGRYCG 1 cut(s) 64
BstMWI GCNNNNNNNGC 4 cut(s) 98, 473, 1015, 1265
BstNI CCWGG 1 cut(s) 173
BstSCI CCNGG 1 cut(s) 171
BstSFI CTRYAG 4 cut(s) 435, 777, 930, 1184
BstUI CGCG 3 cut(s) 66, 245, 1042
BstV1I GCAGC 5 cut(s) 17, 101, 104, 479, 996
BstV2I GAAGAC 1 cut(s) 385
BstX2I RGATCY 1 cut(s) 619
BstXI CCANNNNNNTGG 1 cut(s) 1022
BstYI RGATCY 1 cut(s) 619
Bsu36I CCTNAGG 1 cut(s) 342
BsuI GTATCC 1 cut(s) 882
BsuRI GGCC 2 cut(s) 717, 948
BtsCI GGATG 5 cut(s) 632, 636, 924, 1143, 1220
BtsI GCAGTG 1 cut(s) 432
BtsIMutI CAGTG 1 cut(s) 432
BtuMI TCGCGA 1 cut(s) 66
Cac8I GCNNGC 4 cut(s) 18, 68, 1020, 1197
CaiI CAGNNNCTG 1 cut(s) 1192
CfoI GCGC 3 cut(s) 103, 303, 1044
CseI GACGC 1 cut(s) 1111
CsiI ACCWGGT 1 cut(s) 171
Csp6I GTAC 6 cut(s) 181, 336, 348, 460, 669, 790
CviAII CATG 4 cut(s) 689, 760, 1035, 1243
CviQI GTAC 6 cut(s) 181, 336, 348, 460, 669, 790
DdeI CTNAG 6 cut(s) 109, 206, 236, 296, 342, 1121
DpnI GATC 6 cut(s) 63, 224, 272, 621, 1028, 1065
DpnII GATC 6 cut(s) 61, 222, 270, 619, 1026, 1063
EaeI YGGCCR 2 cut(s) 715, 946
Ecl136II GAGCTC 1 cut(s) 205
Eco130I CCWWGG 2 cut(s) 846, 1055
Eco24I GRGCYC 1 cut(s) 207
Eco53kI GAGCTC 1 cut(s) 205
Eco57I CTGAAG 2 cut(s) 155, 864
Eco81I CCTNAGG 1 cut(s) 342
EcoICRI GAGCTC 1 cut(s) 205
EcoRII CCWGG 1 cut(s) 171
EcoT14I CCWWGG 2 cut(s) 846, 1055
EcoT38I GRGCYC 1 cut(s) 207
ErhI CCWWGG 2 cut(s) 846, 1055
Esp3I CGTCTC 1 cut(s) 1055
FaeI CATG 4 cut(s) 692, 763, 1038, 1246
FaqI GGGAC 4 cut(s) 143, 663, 1102, 1114
FatI CATG 4 cut(s) 688, 759, 1034, 1242
FauNDI CATATG 2 cut(s) 482, 598
FbaI TGATCA 1 cut(s) 222
Fnu4HI GCNGC 7 cut(s) 6, 90, 93, 231, 246, 468, 1010
FokI GGATG 5 cut(s) 639, 643, 931, 1150, 1207
FriOI GRGCYC 1 cut(s) 207
Fsp4HI GCNGC 7 cut(s) 6, 90, 93, 231, 246, 468, 1010
FspBI CTAG 3 cut(s) 285, 608, 623
GlaI GCGC 3 cut(s) 102, 302, 1043
GluI GCNGC 7 cut(s) 6, 90, 93, 231, 246, 468, 1010
GsaI CCCAGC 4 cut(s) 503, 918, 1018, 1026
HaeII RGCGCY 1 cut(s) 104
HaeIII GGCC 2 cut(s) 717, 948
HgaI GACGC 1 cut(s) 1111
HhaI GCGC 3 cut(s) 103, 303, 1044
Hin1II CATG 4 cut(s) 692, 763, 1038, 1246
Hin6I GCGC 3 cut(s) 101, 301, 1042
HinP1I GCGC 3 cut(s) 101, 301, 1042
HindIII AAGCTT 1 cut(s) 1226
HinfI GANTC 7 cut(s) 43, 130, 217, 365, 440, 530, 940
HphI GGTGA 1 cut(s) 250
Hpy166II GTNNAC 2 cut(s) 1111, 1248
Hpy188I TCNGA 4 cut(s) 12, 135, 209, 222
Hpy188III TCNNGA 7 cut(s) 65, 285, 521, 707, 967, 991, 1067
Hpy8I GTNNAC 2 cut(s) 1111, 1248
HpyAV CCTTC 1 cut(s) 885
HpyCH4III ACNGT 3 cut(s) 262, 724, 1188
HpyCH4IV ACGT 1 cut(s) 291
HpyCH4V TGCA 4 cut(s) 437, 467, 734, 763
HpyF10VI GCNNNNNNNGC 4 cut(s) 98, 473, 1015, 1265
HpyF3I CTNAG 6 cut(s) 109, 206, 236, 296, 342, 1121
HpySE526I ACGT 1 cut(s) 291
Hsp92II CATG 4 cut(s) 692, 763, 1038, 1246
HspAI GCGC 3 cut(s) 101, 301, 1042
Ksp22I TGATCA 1 cut(s) 222
Kzo9I GATC 6 cut(s) 61, 222, 270, 619, 1026, 1063
LmnI GCTCC 3 cut(s) 202, 770, 969
Lsp1109I GCAGC 5 cut(s) 17, 101, 104, 479, 996
LweI GCATC 2 cut(s) 743, 782
MabI ACCWGGT 1 cut(s) 171
MaeI CTAG 3 cut(s) 285, 608, 623
MaeII ACGT 1 cut(s) 291
MaeIII GTNAC 1 cut(s) 256
MalI GATC 6 cut(s) 63, 224, 272, 621, 1028, 1065
MboI GATC 6 cut(s) 61, 222, 270, 619, 1026, 1063
MboII GAAGA 5 cut(s) 244, 385, 870, 1157, 1159
MflI RGATCY 1 cut(s) 619
MhlI GDGCHC 1 cut(s) 207
MlsI TGGCCA 2 cut(s) 717, 948
MluCI AATT 7 cut(s) 211, 387, 445, 678, 729, 765, 1127
MluNI TGGCCA 2 cut(s) 717, 948
MlyI GAGTC 3 cut(s) 37, 374, 539
MmeI TCCRAC 2 cut(s) 364, 871
Mox20I TGGCCA 2 cut(s) 717, 948
MscI TGGCCA 2 cut(s) 717, 948
MseI TTAA 6 cut(s) 264, 324, 354, 681, 746, 1230
MslI CAYNNNNRTG 1 cut(s) 954
Msp20I TGGCCA 2 cut(s) 717, 948
MspR9I CCNGG 1 cut(s) 173
Mva1269I GAATGC 1 cut(s) 806
MvaI CCWGG 1 cut(s) 173
MvnI CGCG 3 cut(s) 66, 245, 1042
MwoI GCNNNNNNNGC 4 cut(s) 98, 473, 1015, 1265
NdeI CATATG 2 cut(s) 482, 598
NdeII GATC 6 cut(s) 61, 222, 270, 619, 1026, 1063
NlaIII CATG 4 cut(s) 692, 763, 1038, 1246
NmuCI GTSAC 1 cut(s) 256
NruI TCGCGA 1 cut(s) 66
PcsI WCGNNNNNNNCGW 1 cut(s) 38
PctI GAATGC 1 cut(s) 806
PfeI GAWTC 4 cut(s) 130, 217, 440, 940
PflMI CCANNNNNTGG 1 cut(s) 602
PkrI GCNGC 7 cut(s) 7, 91, 94, 232, 247, 469, 1011
Ple19I CGATCG 1 cut(s) 64
PleI GAGTC 3 cut(s) 37, 373, 538
PpsI GAGTC 3 cut(s) 37, 373, 538
PshBI ATTAAT 1 cut(s) 681
Psp124BI GAGCTC 1 cut(s) 207
Psp6I CCWGG 1 cut(s) 171
PspFI CCCAGC 4 cut(s) 499, 914, 1014, 1022
PspGI CCWGG 1 cut(s) 171
PsrI GAACNNNNNNTAC 2 cut(s) 501, 533
PstI CTGCAG 1 cut(s) 439
PstNI CAGNNNCTG 1 cut(s) 1192
PsuI RGATCY 1 cut(s) 619
PvuI CGATCG 1 cut(s) 64
RgaI GCGATCGC 1 cut(s) 64
RruI TCGCGA 1 cut(s) 66
RsaI GTAC 6 cut(s) 182, 337, 349, 461, 670, 791
RsaNI GTAC 6 cut(s) 181, 336, 348, 460, 669, 790
RseI CAYNNNNRTG 1 cut(s) 954
SacI GAGCTC 1 cut(s) 207
SaqAI TTAA 6 cut(s) 264, 324, 354, 681, 746, 1230
SatI GCNGC 7 cut(s) 6, 90, 93, 231, 246, 468, 1010
Sau3AI GATC 6 cut(s) 61, 222, 270, 619, 1026, 1063
SchI GAGTC 3 cut(s) 37, 374, 539
ScrFI CCNGG 1 cut(s) 173
SduI GDGCHC 1 cut(s) 207
SexAI ACCWGGT 1 cut(s) 171
SfaAI GCGATCGC 1 cut(s) 64
SfaNI GCATC 2 cut(s) 743, 782
SfcI CTRYAG 4 cut(s) 435, 777, 930, 1184
SgfI GCGATCGC 1 cut(s) 64
SmiMI CAYNNNNRTG 1 cut(s) 954
SmlI CTYRAG 1 cut(s) 984
SmoI CTYRAG 1 cut(s) 984
Sse9I AATT 7 cut(s) 211, 387, 445, 678, 729, 765, 1127
SsiI CCGC 4 cut(s) 231, 245, 659, 1040
SspI AATATT 1 cut(s) 685
SspMI CTAG 3 cut(s) 285, 608, 623
SstI GAGCTC 1 cut(s) 207
StyD4I CCNGG 1 cut(s) 171
StyI CCWWGG 2 cut(s) 846, 1055
TaaI ACNGT 3 cut(s) 262, 724, 1188
TaiI ACGT 1 cut(s) 294
TaqI TCGA 4 cut(s) 41, 215, 407, 1062
TasI AATT 7 cut(s) 211, 387, 445, 678, 729, 765, 1127
TatI WGTACW 3 cut(s) 459, 668, 789
TauI GCSGC 2 cut(s) 233, 248
TfiI GAWTC 4 cut(s) 130, 217, 440, 940
Tru1I TTAA 6 cut(s) 264, 324, 354, 681, 746, 1230
Tru9I TTAA 6 cut(s) 264, 324, 354, 681, 746, 1230
TscAI CASTG 1 cut(s) 439
TseFI GTSAC 1 cut(s) 256
TseI GCWGC 5 cut(s) 5, 89, 92, 467, 1009
Tsp45I GTSAC 1 cut(s) 256
TspDTI ATGAA 2 cut(s) 677, 1203
TspGWI ACGGA 1 cut(s) 145
TspRI CASTG 1 cut(s) 439
Van91I CCANNNNNTGG 1 cut(s) 602
VspI ATTAAT 1 cut(s) 681
XapI RAATTY 1 cut(s) 211
XbaI TCTAGA 1 cut(s) 284
XcmI CCANNNNNNNNNTGG 1 cut(s) 487
XspI CTAG 3 cut(s) 285, 608, 623
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.