Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr12

Orthogroup ID

OG0001810

Physical Location & Seq

Genomic Coordinates Reverse (-)

30265797 .. 30270673

Gene Structure 4877 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD12G1227000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2595 bp

ATGATGGTGGGAAGAGCTGTTTGGATGCTGACTGTGATTGGATGGCTTGGAGGTGTGCAGCTAAACCCAGTGGAAGCTCACCCTCACCGGATTCTTGTCGATACAGATGTGAACGTTGACGATGTTCTTGCTTTATTTTATCTCTTGAAGCAAAACAAGATGGAATTCGACTTAAAGGCAATTACTATTAATACAAATGGATGGAACGTGATGCAGGGCACGCTGTTCAATTATATATATGACATTCTTTCTGTGATGGATCGTGATGACATTCCGGTTGGTGTTGGAGGTGAAGGTGGTATTTTGCCAAATGACACCATCCAGCCTAATGTTGGAGGTTATCTTCCTATTATTGACCAGGGACCGTCCACTGCAGGTGGCTGTAGATACAGACAATCAATACCACCGGGTCCAAAGTGGTCGTCTAGATGTAAATACAAACTATGGCTATGCGCAAGGCTTTACTTCCTAAGAGGTAACAGAAAATATGTACCGCTTCAGCAACCTACGGCTCAGCAAGTGATGAAAGACGCGATATCTGCAGGTCCCATCACTGTGTTTCTTATGGGTATTCAGACGAATTTTGCCATTTTTCTTATGACGAATCCTCATTTAAAGAAAAATATTAAGCATATATATGCCATGGGAGGTGCTGTCAGATCAACCTTGCTCCGGAAATGCCCACTTCAGTGCTGTGCGGTGACATTGGTAATCTGTTTCGACAAGACAGCGACCCGTATGGAGAGTACAATATCTTTGGAGATCCTTTTGCTGCATACACGGTATATAGTATTGCATTCTGGTATTCCAGTTACGCTCGTTCCTCTGGATGCAACAAGAACGATTCCTCTAGATGAGCCTTTTTTCAAAGCATTTGAGAAGAAACAGGATACATATGAGGCACAATATTGCTTCCAGTCCTTGAAAATGGTTCGTGATACATGGTCGAACGATGAATTTTATAAGGAATTTTGCATCTGGGATGCTTTTATGGTTGGTGCAGCGTTATCTCAAATGCGTAGTTTAGAGAGAGATCACAGAGAAAATGAATTTGCTAAATTTGTGTACATGAACCTCACAGTGATTACTTCAAACAGACCTTATGGAATATCTGACGGCTCAAACCCTCTCATCGATGGGCGTTTGATCCCAAAGTTTGGCGTACAGAAGAATGGGGTGCATAGTGGTCATGTTCAGATGGGAATGGAAGACCCGTTTTGCCTCGTCAAAGAGGGGAAAGGAAAATGTCAGGATGGTTACACAAAGGAGACAACTGGTGCGGAAGCAGTTAGCGTACTTGTTGCAACAGGAGCTAAGCGAGATCATGACAGTAACAGTACTCGTGCCAAATATTTCTACGACAGTTTCTTGGATGTTATAAATCGACCTAAGAAAACTGAACGGCCGAATATTAGAACACAGCTTCCACTCCACGAGAGTGTACTTCACAAACCAGATTTCGGAAAGAAATTGATGGGTAAAGCTCTAGTATTTGATATGGATATGAGTGCTGGGGACTTTGTAGTTCTTCTATATCTCCTAAAATTACCTGTGGAAAGGATCAACCTCAAGGGAATACTTGTTAGTGCTAATGGGTGGGCAACCGCTGCAACCATAGACGTTGTTTACGACATACTGCATATGATGGGCCGTGATGATATTCCAGTTGGTCTAGGAAATGTATTTGCAGTTGGGCAATCTTATTTATCTTTCACTTCTCTTGGAGACTGCACGTACATCAGTTCCATTCCTCAGGGTAGTGGTGGCTCCTTGGACTCTGACACACTCTATGGATTTGCTCGTGCCTTACCTAGTAGTCCTAGGAGATACGGACTAGCAACCAAGGAATTCCCCGGACTTGGACAGCCAACTGCACTAGATGTTTGGAGGTCCATTGTAAAATCACTCGATCCAGGATCCAAGATTACTTTGTTGACCAATGGGCCTTTGACAAATTTAGCCGAAATCATTCTTTCTGAGAACACAGACTCAGTGGTCCAGGATGTATATATTGTTGGGGGACACATTCGCCATGATAACGAGCAAGGAAATCTGTTTACTGTTCCTTCAAACAAATATGCAGAATTCAACATGTTTCTTGACCCTTTGGCTGCAAAAGCAGTTTTTGATTCGAAACTGAACATAACATTGATTCCATTGGGGATACAGAAGCAAGTCAGTTCCTTTCAGAATATTCTTGATAAATTAAAGCTAACAGATTCGACTCCTGAAGCTGTATTTGCCCAGCATCTGCTTTCAAGGCTATGGAAACTGAAACAGAAGCATCATAGATACCTTCACATGGATACATATCTAGGGGAAATCCTTGGTGCCGTAATCTTGGGTAGCAGTCATCCTCAACTAAACCCAACCTTTAAGTTTATGCCCCTCAAGGTGGTGGCTGAGGGAGATGTATCGGTGATCGGGCAGCTACTTGTTGATGAACATCAATCAAAGATGGTGAAGATACTGAGCAGTGTAAATCCAGAGGCATATCATGAAGAATTTGCTAACAAATTAGGTGAACAAAAGAAGTTTGCTGTTGTAGCAAGCTTTGTTGAGGAAAAAAAAATTATCGGGTGCCCAACGAAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

IU_nuc_hydro

Protein Analysis

865

Amino Acids

96.24

Weight (kDa)

8.34

Isoelectric Point (pI)

34.5

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
IU_nuc_hydro	PF01156	31 - 361	1.1e-23	Inosine-uridine preferring nucleoside hydrolase
IU_nuc_hydro	PF01156	496 - 833	1e-31	Inosine-uridine preferring nucleoside hydrolase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001810)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G18860 AT5G18860 AT5G18870 AT5G18890
fragaria_vesca	FvH4_4g16830 FvH4_4g16830 FvH4_4g16850 FvH4_4g16850 FvH4_4g16850 FvH4_4g16850 FvH4_4g16850
malus_domestica	MD12G1227000.v1.1 MD13G1176200.v1.1 MD16G1178000.v1.1
prunus_persica	Prupe.1G145300_v2.0.a1 Prupe.1G145300_v2.0.a1 Prupe.6G332600_v2.0.a1 Prupe.6G332600_v2.0.a1
pyrus_communis	pycom12g21140 pycom12g21170 pycom13g15200 pycom16g14950
rosa_chinensis	RchiOBHm_Chr3g0453471 RchiOBHm_Chr4g0420411 RchiOBHm_Chr4g0420421
rosa_laevigata	RLG00000007765 RLG00000025511
rosa_multiflora	Rmu_sc0000510.1_g000010 Rmu_sc0002248.1_g000022
rosa_roxburghii	Rroxscaffold_5G00363050 Rroxscaffold_6G00430440
rosa_rugosa	Rorug02G0649300 Rorug04G0163700
rosa_samantha	Rh3AG052100 Rh3AG052300 Rh3BG053600 Rh3BG053700 Rh3CG052900 Rh3CG053100 Rh3DG053700 Rh3DG053900 Rh4AG225200 Rh4BG228000 Rh4CG239500 Rh4DG223700
rosa_wichuraiana	Rw3G004020 Rw4G019440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	963, 1379
AarI	CACCTGC	1 cut(s)	365
AasI	GACNNNNNNGTC	1 cut(s)	1994
Acc16I	TGCGCA	1 cut(s)	454
Acc36I	ACCTGC	2 cut(s)	365, 533
AccB1I	GGYRCC	2 cut(s)	2330, 2580
AccB7I	CCANNNNNTGG	1 cut(s)	1157
AccII	CGCG	1 cut(s)	533
AccIII	TCCGGA	1 cut(s)	672
AciI	CCGC	4 cut(s)	494, 698, 1280, 1605
AclI	AACGTT	1 cut(s)	114
AclWI	GGATC	7 cut(s)	267, 757, 1141, 1568, 1904, 1911, 1924
AcoI	YGGCCR	1 cut(s)	1403
AcuI	CTGAAG	3 cut(s)	482, 671, 2250
AfaI	GTAC	8 cut(s)	492, 748, 1067, 1164, 1296, 1339, 1443, 1736
AfiI	CCNNNNNNNGG	7 cut(s)	332, 672, 1157, 1460, 1859, 2302, 2395
AflIII	ACRYGT	1 cut(s)	2091
AgsI	TTSAA	8 cut(s)	148, 229, 868, 925, 1092, 2070, 2089, 2259
AjnI	CCWGG	3 cut(s)	357, 1912, 1998
AjuI	GAANNNNNNNTTGG	1 cut(s)	36
AleI	CACNNNNGTG	2 cut(s)	688, 1437
AloI	GAACNNNNNNTCC	2 cut(s)	1408, 1440
Alw26I	GTCTC	2 cut(s)	1262, 1719
AlwI	GGATC	7 cut(s)	267, 757, 1141, 1568, 1904, 1911, 1924
AlwNI	CAGNNNCTG	1 cut(s)	2251
Aor13HI	TCCGGA	1 cut(s)	672
AoxI	GGCC	3 cut(s)	1403, 1648, 1943
ApeKI	GCWGC	6 cut(s)	58, 772, 1001, 1607, 2111, 2428
ArsI	GACNNNNNNTTYG	2 cut(s)	407, 439
AseI	ATTAAT	1 cut(s)	189
Asp700I	GAANNNNTTC	1 cut(s)	1968
AspA2I	CCTAGG	1 cut(s)	1820
AspLEI	GCGC	1 cut(s)	455
AspS9I	GGNCC	7 cut(s)	362, 410, 545, 1648, 1890, 1943, 1996
AsuC2I	CCSGG	2 cut(s)	408, 1854
AsuHPI	GGTGA	7 cut(s)	71, 77, 302, 712, 2431, 2473, 2534
AsuII	TTCGAA	1 cut(s)	2132
AvaII	GGWCC	5 cut(s)	362, 410, 545, 1890, 1996
AvrII	CCTAGG	1 cut(s)	1820
AxyI	CCTNAGG	1 cut(s)	1752
BaeGI	GKGCMC	2 cut(s)	221, 2585
BaeI	ACNNNNGTAYC	2 cut(s)	93, 126
BamHI	GGATCC	1 cut(s)	1916
BanI	GGYRCC	2 cut(s)	2330, 2580
BauI	CACGAG	3 cut(s)	1341, 1433, 1800
BbsI	GAAGAC	1 cut(s)	1215
BbvCI	CCTCAGC	1 cut(s)	2403
BbvI	GCAGC	6 cut(s)	70, 759, 1013, 1594, 2098, 2440
BceAI	ACGGC	5 cut(s)	525, 1132, 1418, 1635, 2318
BcgI	CGANNNNNNTGC	2 cut(s)	110, 144
BciT130I	CCWGG	3 cut(s)	359, 1914, 2000
BciVI	GTATCC	3 cut(s)	883, 2157, 2299
BcnI	CCSGG	2 cut(s)	408, 1854
BcoDI	GTCTC	2 cut(s)	1262, 1719
BfaI	CTAG	9 cut(s)	426, 851, 1487, 1673, 1812, 1821, 1835, 1877, 2315
BfmI	CTRYAG	3 cut(s)	372, 382, 540
BfuAI	ACCTGC	2 cut(s)	365, 533
BfuI	GTATCC	3 cut(s)	883, 2157, 2299
BisI	GCNGC	6 cut(s)	59, 773, 1002, 1608, 2112, 2429
BlnI	CCTAGG	1 cut(s)	1820
BlpI	GCTNAGC	2 cut(s)	513, 1314
BlsI	GCNGC	6 cut(s)	60, 774, 1003, 1609, 2113, 2430
BmcAI	AGTACT	1 cut(s)	1339
Bme1390I	CCNGG	5 cut(s)	359, 408, 1854, 1914, 2000
Bme18I	GGWCC	5 cut(s)	362, 410, 545, 1890, 1996
BmgT120I	GGNCC	7 cut(s)	362, 410, 545, 1648, 1890, 1943, 1996
BmiI	GGNNCC	7 cut(s)	363, 411, 547, 1768, 1918, 2332, 2582
BmrFI	CCNGG	5 cut(s)	359, 408, 1854, 1914, 2000
BmrI	ACTGGG	1 cut(s)	62
BmsI	GCATC	7 cut(s)	15, 201, 820, 973, 984, 2257, 2293
BmuI	ACTGGG	1 cut(s)	62
BpiI	GAAGAC	1 cut(s)	1215
Bpu10I	CCTNAGC	1 cut(s)	2403
Bpu1102I	GCTNAGC	2 cut(s)	513, 1314
Bpu14I	TTCGAA	1 cut(s)	2132
BpuEI	CTTGAG	2 cut(s)	1553, 2375
BpuMI	CCSGG	2 cut(s)	408, 1854
Bsa29I	ATCGAT	1 cut(s)	1134
BsaAI	YACGTR	1 cut(s)	1734
BsaBI	GATNNNNATC	2 cut(s)	2310, 2445
BsaJI	CCNNGG	7 cut(s)	358, 642, 1770, 1820, 1842, 1852, 2326
BsaWI	WCCGGW	3 cut(s)	87, 274, 672
BsaXI	ACNNNNNCTCC	2 cut(s)	639, 669
Bsc4I	CCNNNNNNNGG	7 cut(s)	332, 672, 1157, 1460, 1859, 2302, 2395
Bse1I	ACTGG	5 cut(s)	68, 809, 916, 1279, 1664
Bse21I	CCTNAGG	1 cut(s)	1752
Bse8I	GATNNNNATC	2 cut(s)	2310, 2445
BseAI	TCCGGA	1 cut(s)	672
BseBI	CCWGG	3 cut(s)	359, 1914, 2000
BseCI	ATCGAT	1 cut(s)	1134
BseDI	CCNNGG	7 cut(s)	358, 642, 1770, 1820, 1842, 1852, 2326
BseJI	GATNNNNATC	2 cut(s)	2310, 2445
BseLI	CCNNNNNNNGG	7 cut(s)	332, 672, 1157, 1460, 1859, 2302, 2395
BseMII	CTCAG	6 cut(s)	527, 1766, 1968, 2004, 2394, 2462
BseNI	ACTGG	5 cut(s)	68, 809, 916, 1279, 1664
BseSI	GKGCMC	2 cut(s)	221, 2585
BseX3I	CGGCCG	1 cut(s)	1403
BseXI	GCAGC	6 cut(s)	70, 759, 1013, 1594, 2098, 2440
BseYI	CCCAGC	2 cut(s)	1511, 2244
BsgI	GTGCAG	4 cut(s)	77, 1020, 1714, 1857
Bsh1236I	CGCG	1 cut(s)	533
Bsh1285I	CGRYCG	1 cut(s)	1406
BshFI	GGCC	3 cut(s)	1405, 1650, 1945
BshNI	GGYRCC	2 cut(s)	2330, 2580
BshVI	ATCGAT	1 cut(s)	1134
BsiEI	CGRYCG	1 cut(s)	1406
BsiSI	CCGG	5 cut(s)	88, 275, 407, 673, 1854
BslFI	GGGAC	4 cut(s)	375, 531, 1529, 2034
BslI	CCNNNNNNNGG	7 cut(s)	332, 672, 1157, 1460, 1859, 2302, 2395
BsmAI	GTCTC	2 cut(s)	1262, 1719
BsmFI	GGGAC	4 cut(s)	375, 531, 1529, 2034
BsmI	GAATGC	1 cut(s)	796
BsnI	GGCC	3 cut(s)	1405, 1650, 1945
Bsp119I	TTCGAA	1 cut(s)	2132
Bsp1286I	GDGCHC	2 cut(s)	221, 2585
Bsp13I	TCCGGA	1 cut(s)	672
Bsp1407I	TGTACA	1 cut(s)	1065
Bsp1720I	GCTNAGC	2 cut(s)	513, 1314
Bsp19I	CCATGG	1 cut(s)	642
BspACI	CCGC	4 cut(s)	494, 698, 1280, 1605
BspANI	GGCC	3 cut(s)	1405, 1650, 1945
BspCNI	CTCAG	6 cut(s)	526, 1765, 1969, 2003, 2395, 2463
BspDI	ATCGAT	1 cut(s)	1134
BspEI	TCCGGA	1 cut(s)	672
BspFNI	CGCG	1 cut(s)	533
BspHI	TCATGA	2 cut(s)	1324, 2497
BspLI	GGNNCC	7 cut(s)	363, 411, 547, 1768, 1918, 2332, 2582
BspMAI	CTGCAG	2 cut(s)	376, 544
BspMI	ACCTGC	2 cut(s)	365, 533
BspPI	GGATC	7 cut(s)	267, 757, 1141, 1568, 1904, 1911, 1924
BspQI	GCTCTTC	1 cut(s)	7
BspT104I	TTCGAA	1 cut(s)	2132
BspT107I	GGYRCC	2 cut(s)	2330, 2580
BsrGI	TGTACA	1 cut(s)	1065
BsrI	ACTGG	5 cut(s)	68, 809, 916, 1279, 1664
BssECI	CCNNGG	7 cut(s)	358, 642, 1770, 1820, 1842, 1852, 2326
BssSI	CACGAG	3 cut(s)	1341, 1433, 1800
BssT1I	CCWWGG	5 cut(s)	642, 1770, 1820, 1842, 2326
Bst2BI	CACGAG	3 cut(s)	1341, 1433, 1800
Bst2UI	CCWGG	3 cut(s)	359, 1914, 2000
Bst4CI	ACNGT	9 cut(s)	34, 366, 556, 783, 1081, 1331, 1337, 1364, 2062
Bst6I	CTCTTC	1 cut(s)	7
BstAPI	GCANNNNNTGC	1 cut(s)	1607
BstAUI	TGTACA	1 cut(s)	1065
BstBAI	YACGTR	1 cut(s)	1734
BstBI	TTCGAA	1 cut(s)	2132
BstC8I	GCNNGC	2 cut(s)	221, 2551
BstDEI	CTNAG	9 cut(s)	470, 513, 1314, 1389, 1752, 1977, 1990, 2403, 2471
BstDSI	CCRYGG	1 cut(s)	642
BstFNI	CGCG	1 cut(s)	533
BstHHI	GCGC	1 cut(s)	455
BstMAI	GTCTC	2 cut(s)	1262, 1719
BstMCI	CGRYCG	1 cut(s)	1406
BstMWI	GCNNNNNNNGC	8 cut(s)	220, 539, 1310, 1607, 2117, 2240, 2260, 2546
BstNI	CCWGG	3 cut(s)	359, 1914, 2000
BstNSI	RCATGY	1 cut(s)	2095
BstSCI	CCNGG	5 cut(s)	357, 406, 1852, 1912, 1998
BstSFI	CTRYAG	3 cut(s)	372, 382, 540
BstSLI	GKGCMC	2 cut(s)	221, 2585
BstUI	CGCG	1 cut(s)	533
BstV1I	GCAGC	6 cut(s)	70, 759, 1013, 1594, 2098, 2440
BstV2I	GAAGAC	1 cut(s)	1215
BstX2I	RGATCY	2 cut(s)	762, 1916
BstYI	RGATCY	2 cut(s)	762, 1916
BstZI	CGGCCG	1 cut(s)	1403
Bsu15I	ATCGAT	1 cut(s)	1134
Bsu36I	CCTNAGG	1 cut(s)	1752
BsuI	GTATCC	3 cut(s)	883, 2157, 2299
BsuRI	GGCC	3 cut(s)	1405, 1650, 1945
BsuTUI	ATCGAT	1 cut(s)	1134
BtgI	CCRYGG	1 cut(s)	642
BtsI	GCAGTG	2 cut(s)	369, 2482
BtsIMutI	CAGTG	7 cut(s)	75, 369, 552, 695, 1086, 1998, 2482
BveI	ACCTGC	2 cut(s)	365, 533
Cac8I	GCNNGC	2 cut(s)	221, 2551
CaiI	CAGNNNCTG	1 cut(s)	2251
CciI	TCATGA	2 cut(s)	1324, 2497
CfoI	GCGC	1 cut(s)	455
Cfr13I	GGNCC	7 cut(s)	362, 410, 545, 1648, 1890, 1943, 1996
ClaI	ATCGAT	1 cut(s)	1134
CseI	GACGC	1 cut(s)	539
Csp6I	GTAC	8 cut(s)	491, 747, 1066, 1163, 1295, 1338, 1442, 1735
CviAII	CATG	9 cut(s)	643, 942, 1069, 1190, 1325, 2033, 2092, 2302, 2498
CviQI	GTAC	8 cut(s)	491, 747, 1066, 1163, 1295, 1338, 1442, 1735
DdeI	CTNAG	9 cut(s)	470, 513, 1314, 1389, 1752, 1977, 1990, 2403, 2471
DraI	TTTAAA	1 cut(s)	615
DrdI	GACNNNNNNGTC	1 cut(s)	1994
DseDI	GACNNNNNNGTC	1 cut(s)	1994
EaeI	YGGCCR	1 cut(s)	1403
EagI	CGGCCG	1 cut(s)	1403
Eam1104I	CTCTTC	1 cut(s)	7
EarI	CTCTTC	1 cut(s)	7
EclXI	CGGCCG	1 cut(s)	1403
Eco130I	CCWWGG	5 cut(s)	642, 1770, 1820, 1842, 2326
Eco32I	GATATC	1 cut(s)	537
Eco47I	GGWCC	5 cut(s)	362, 410, 545, 1890, 1996
Eco52I	CGGCCG	1 cut(s)	1403
Eco57I	CTGAAG	3 cut(s)	482, 671, 2250
Eco81I	CCTNAGG	1 cut(s)	1752
EcoO109I	RGGNCCY	1 cut(s)	545
EcoRI	GAATTC	3 cut(s)	164, 1847, 2084
EcoRII	CCWGG	3 cut(s)	357, 1912, 1998
EcoRV	GATATC	1 cut(s)	537
EcoT14I	CCWWGG	5 cut(s)	642, 1770, 1820, 1842, 2326
ErhI	CCWWGG	5 cut(s)	642, 1770, 1820, 1842, 2326
FaeI	CATG	9 cut(s)	646, 945, 1072, 1193, 1328, 2036, 2095, 2305, 2501
FaqI	GGGAC	4 cut(s)	375, 531, 1529, 2034
FatI	CATG	9 cut(s)	642, 941, 1068, 1189, 1324, 2032, 2091, 2301, 2497
FauNDI	CATATG	2 cut(s)	895, 1641
Fnu4HI	GCNGC	6 cut(s)	59, 773, 1002, 1608, 2112, 2429
Fsp4HI	GCNGC	6 cut(s)	59, 773, 1002, 1608, 2112, 2429
FspBI	CTAG	9 cut(s)	426, 851, 1487, 1673, 1812, 1821, 1835, 1877, 2315
FspI	TGCGCA	1 cut(s)	454
GlaI	GCGC	1 cut(s)	454
GluI	GCNGC	6 cut(s)	59, 773, 1002, 1608, 2112, 2429
GsaI	CCCAGC	2 cut(s)	1515, 2248
HaeIII	GGCC	3 cut(s)	1405, 1650, 1945
HapII	CCGG	5 cut(s)	88, 275, 407, 673, 1854
HgaI	GACGC	1 cut(s)	539
HhaI	GCGC	1 cut(s)	455
Hin1II	CATG	9 cut(s)	646, 945, 1072, 1193, 1328, 2036, 2095, 2305, 2501
Hin6I	GCGC	1 cut(s)	453
HinP1I	GCGC	1 cut(s)	453
HincII	GTYRAC	2 cut(s)	118, 1935
HindII	GTYRAC	2 cut(s)	118, 1935
HindIII	AAGCTT	1 cut(s)	2551
HinfI	GANTC	9 cut(s)	91, 604, 844, 1775, 1988, 2129, 2152, 2219, 2224
HpaII	CCGG	5 cut(s)	88, 275, 407, 673, 1854
HphI	GGTGA	7 cut(s)	71, 77, 302, 712, 2431, 2473, 2534
Hpy166II	GTNNAC	9 cut(s)	112, 118, 369, 1066, 1442, 1627, 1935, 2058, 2525
Hpy188I	TCNGA	8 cut(s)	576, 659, 1114, 1197, 1463, 1780, 1978, 2190
Hpy8I	GTNNAC	9 cut(s)	112, 118, 369, 1066, 1442, 1627, 1935, 2058, 2525
HpyAV	CCTTC	3 cut(s)	287, 2076, 2306
HpyCH4III	ACNGT	9 cut(s)	34, 366, 556, 783, 1081, 1331, 1337, 1364, 2062
HpyCH4IV	ACGT	4 cut(s)	114, 207, 1620, 1733
HpyF10VI	GCNNNNNNNGC	8 cut(s)	220, 539, 1310, 1607, 2117, 2240, 2260, 2546
HpyF3I	CTNAG	9 cut(s)	470, 513, 1314, 1389, 1752, 1977, 1990, 2403, 2471
HpySE526I	ACGT	4 cut(s)	114, 207, 1620, 1733
Hsp92II	CATG	9 cut(s)	646, 945, 1072, 1193, 1328, 2036, 2095, 2305, 2501
HspAI	GCGC	1 cut(s)	453
Kpn2I	TCCGGA	1 cut(s)	672
LguI	GCTCTTC	1 cut(s)	7
LmnI	GCTCC	3 cut(s)	675, 1310, 1772
Lsp1109I	GCAGC	6 cut(s)	70, 759, 1013, 1594, 2098, 2440
LweI	GCATC	7 cut(s)	15, 201, 820, 973, 984, 2257, 2293
MaeI	CTAG	9 cut(s)	426, 851, 1487, 1673, 1812, 1821, 1835, 1877, 2315
MaeII	ACGT	4 cut(s)	114, 207, 1620, 1733
MaeIII	GTNAC	5 cut(s)	476, 700, 811, 1256, 1331
MboII	GAAGA	8 cut(s)	24, 335, 892, 1180, 1220, 1520, 2476, 2513
MflI	RGATCY	2 cut(s)	762, 1916
MhlI	GDGCHC	2 cut(s)	221, 2585
MlyI	GAGTC	3 cut(s)	1769, 1982, 2218
MmeI	TCCRAC	2 cut(s)	265, 313
MroI	TCCGGA	1 cut(s)	672
MroXI	GAANNNNTTC	1 cut(s)	1968
MseI	TTAA	6 cut(s)	173, 189, 614, 627, 2207, 2376
MslI	CAYNNNNRTG	4 cut(s)	554, 636, 688, 1437
MspA1I	CMGCKG	1 cut(s)	1607
MspI	CCGG	5 cut(s)	88, 275, 407, 673, 1854
MspR9I	CCNGG	5 cut(s)	359, 408, 1854, 1914, 2000
Mva1269I	GAATGC	1 cut(s)	796
MvaI	CCWGG	3 cut(s)	359, 1914, 2000
MvnI	CGCG	1 cut(s)	533
MwoI	GCNNNNNNNGC	8 cut(s)	220, 539, 1310, 1607, 2117, 2240, 2260, 2546
NciI	CCSGG	2 cut(s)	408, 1854
NcoI	CCATGG	1 cut(s)	642
NdeI	CATATG	2 cut(s)	895, 1641
NlaIII	CATG	9 cut(s)	646, 945, 1072, 1193, 1328, 2036, 2095, 2305, 2501
NlaIV	GGNNCC	7 cut(s)	363, 411, 547, 1768, 1918, 2332, 2582
NmuCI	GTSAC	1 cut(s)	700
NsbI	TGCGCA	1 cut(s)	454
NspI	RCATGY	1 cut(s)	2095
NspV	TTCGAA	1 cut(s)	2132
OliI	CACNNNNGTG	2 cut(s)	688, 1437
PagI	TCATGA	2 cut(s)	1324, 2497
PaqCI	CACCTGC	1 cut(s)	365
PciI	ACATGT	1 cut(s)	2091
PciSI	GCTCTTC	1 cut(s)	7
PcsI	WCGNNNNNNNCGW	1 cut(s)	1626
PctI	GAATGC	1 cut(s)	796
PdmI	GAANNNNTTC	1 cut(s)	1968
PfeI	GAWTC	6 cut(s)	91, 604, 844, 2129, 2152, 2219
PflMI	CCANNNNNTGG	1 cut(s)	1157
PfoI	TCCNGGA	2 cut(s)	1912, 1998
PkrI	GCNGC	6 cut(s)	60, 774, 1003, 1609, 2113, 2430
PleI	GAGTC	3 cut(s)	1769, 1982, 2218
PpsI	GAGTC	3 cut(s)	1769, 1982, 2218
Ppu21I	YACGTR	1 cut(s)	1734
PpuMI	RGGWCCY	1 cut(s)	545
PscI	ACATGT	1 cut(s)	2091
PshBI	ATTAAT	1 cut(s)	189
PsiI	TTATAA	2 cut(s)	963, 1379
Psp1406I	AACGTT	1 cut(s)	114
Psp5II	RGGWCCY	1 cut(s)	545
Psp6I	CCWGG	3 cut(s)	357, 1912, 1998
PspFI	CCCAGC	2 cut(s)	1511, 2244
PspGI	CCWGG	3 cut(s)	357, 1912, 1998
PspN4I	GGNNCC	7 cut(s)	363, 411, 547, 1768, 1918, 2332, 2582
PspPI	GGNCC	7 cut(s)	362, 410, 545, 1648, 1890, 1943, 1996
PspPPI	RGGWCCY	1 cut(s)	545
PstI	CTGCAG	2 cut(s)	376, 544
PstNI	CAGNNNCTG	1 cut(s)	2251
PsuI	RGATCY	2 cut(s)	762, 1916
RsaI	GTAC	8 cut(s)	492, 748, 1067, 1164, 1296, 1339, 1443, 1736
RsaNI	GTAC	8 cut(s)	491, 747, 1066, 1163, 1295, 1338, 1442, 1735
RseI	CAYNNNNRTG	4 cut(s)	554, 636, 688, 1437
SapI	GCTCTTC	1 cut(s)	7
SaqAI	TTAA	6 cut(s)	173, 189, 614, 627, 2207, 2376
SatI	GCNGC	6 cut(s)	59, 773, 1002, 1608, 2112, 2429
Sau96I	GGNCC	7 cut(s)	362, 410, 545, 1648, 1890, 1943, 1996
ScaI	AGTACT	1 cut(s)	1339
SchI	GAGTC	3 cut(s)	1769, 1982, 2218
ScrFI	CCNGG	5 cut(s)	359, 408, 1854, 1914, 2000
SduI	GDGCHC	2 cut(s)	221, 2585
SfaNI	GCATC	7 cut(s)	15, 201, 820, 973, 984, 2257, 2293
SfcI	CTRYAG	3 cut(s)	372, 382, 540
SfuI	TTCGAA	1 cut(s)	2132
SinI	GGWCC	5 cut(s)	362, 410, 545, 1890, 1996
SmiMI	CAYNNNNRTG	4 cut(s)	554, 636, 688, 1437
SmlI	CTYRAG	2 cut(s)	1568, 2390
SmoI	CTYRAG	2 cut(s)	1568, 2390
SsiI	CCGC	4 cut(s)	494, 698, 1280, 1605
SspI	AATATT	5 cut(s)	625, 908, 1352, 1411, 2194
SspMI	CTAG	9 cut(s)	426, 851, 1487, 1673, 1812, 1821, 1835, 1877, 2315
StyD4I	CCNGG	5 cut(s)	357, 406, 1852, 1912, 1998
StyI	CCWWGG	5 cut(s)	642, 1770, 1820, 1842, 2326
TaaI	ACNGT	9 cut(s)	34, 366, 556, 783, 1081, 1331, 1337, 1364, 2062
TaiI	ACGT	4 cut(s)	117, 210, 1623, 1736
TaqI	TCGA	9 cut(s)	99, 168, 720, 947, 1134, 1384, 1908, 2132, 2222
TatI	WGTACW	4 cut(s)	746, 1065, 1337, 1441
TfiI	GAWTC	6 cut(s)	91, 604, 844, 2129, 2152, 2219
Tru1I	TTAA	6 cut(s)	173, 189, 614, 627, 2207, 2376
Tru9I	TTAA	6 cut(s)	173, 189, 614, 627, 2207, 2376
TscAI	CASTG	7 cut(s)	75, 376, 559, 695, 1086, 1998, 2482
TseFI	GTSAC	1 cut(s)	700
TseI	GCWGC	6 cut(s)	58, 772, 1001, 1607, 2111, 2428
Tsp45I	GTSAC	1 cut(s)	700
TspDTI	ATGAA	6 cut(s)	539, 969, 1062, 1085, 2457, 2514
TspGWI	ACGGA	1 cut(s)	1845
TspRI	CASTG	7 cut(s)	75, 376, 559, 695, 1086, 1998, 2482
Van91I	CCANNNNNTGG	1 cut(s)	1157
VpaK11BI	GGWCC	5 cut(s)	362, 410, 545, 1890, 1996
VspI	ATTAAT	1 cut(s)	189
XbaI	TCTAGA	2 cut(s)	425, 850
XceI	RCATGY	1 cut(s)	2095
XcmI	CCANNNNNNNNNTGG	1 cut(s)	329
XmaJI	CCTAGG	1 cut(s)	1820
XmnI	GAANNNNTTC	1 cut(s)	1968
XspI	CTAG	9 cut(s)	426, 851, 1487, 1673, 1812, 1821, 1835, 1877, 2315
ZrmI	AGTACT	1 cut(s)	1339

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.