pycom13g15200

Inosine-uridine preferring nucleoside hydrolase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
Physical Location & Seq
Forward (+)
11074895 .. 11079813
4919 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom13g15200.5

Sequence Viewer

Length: 1677 bp
ATGTTGTTGCAGAAGCAGAAACGTTTTGATTGGTTAGTGCAGATGCTAGTTGTTGTGGGATCAGTATTGGTTGTGATTGGAGCTAGCAATTTGCGGACTGTGGAAGGCAGGCCTCACCGGATTCTTTTCGATACAGATGTTGATACCGATGATTTCTTCGGTCTCTTGTACATCTTGAAACTTAACAGATCAGAGTTTGAGTTGGAGGCAGTGACTGTAAATGCAAATGCTTGGACCAATCCTGGACATGCTGTGCATCAAATCTATGACATTTTATACATGATGGGGCGTGATGACGTGGCAGTTGGAGTGGGTGGTGAAGGTGGGATCAAAGAAGATGGTACAATTTTGCCAAATGTCGGTGGATATCTTCCAATTATTGAACAGGGGACTACGACAGCAGGAGGATGCAGATATAGACAAGCCATTCCTGTAGGTGCTAGAGGTCGATTGGATGTTGATTCTAATTTTGGCCTCAGAAAATCTTTCCTCCCCCAGGGGAGCAGGAGATATACTCCCTTTCGACAACCTACTGCTCAGCAAGTGATGATTGACAACATATCTGCAGGTCCCATTACTGTATTTCTGATAGGAGCACACACAAACTTTGCCCTTTTCCTTATGAACAATCCACACCTAAAGAAGAATATTGAGCACATTTATGTCATGGGTGGTGGTGTGAGATCGAAAAACCCTACTGGTTGTTGCCCGGAAAATTCTACGCCCTGTGTTCCTCGGCAGTGTAGTGATCCTGGCAATGTCTTCACAGACTACACAAGTAATCCTTATGCTGAGTTCAATTTCCTTGGTGATCCCTTTGCTGCATACCAGGTTATACATTCTGGGATTTCAGTCACCCTTGTTCCTCTGGATGCAACAAACACCATTCCCGTTAGTCAAAACTTCTTTGAGGCCTTTGAGAAGAGCCAGAACACATATGAGGCACAATATGTCTTCCAGTCCTTGAAAATGGCTCGTGATACTTGGTTTGACAAACAATTCTACACGAGCTATTTCATGTGGGATTCATTTACAGCTGGTGTGGCGGTATCAATCATGCGAAACAACTTGAATAACCCTAATGGAGAAAATGAATTTGCGGAAATGGAGTATATGAATATAACTGTGATTACTTCAAATGAACCTTATGGAGTAACTGATGGCTCTAATCCTTTCTTTGATGGCGTCAAAGTTCCAAAGTTCAACTTAGACAAGAATGGTGTGCATAGTGGTCATGTTCAAAAGGGACTAAGAGATCCATTTTGCATTGGGGAGAATGGCAAAGGGAAATGCAGGGATGGTTATACAGAAGAAGTAACAGGATCAGAGGCTGTGTCTGTGCTTGTTGCTACAAAAGCCAAACCAAATCAGGACCCTCAAAGCCCACTTAACAGAGAATTCTTCGTAAGCTTCCTGGAGGTTCTGAACAACCCCAAACAGAAAGGGAGATTCAATTTAACCACACAATTTCCATTTTACAAGGAAGTGACATATAAACCAGAATTTGGAAACAAAAAACTTGGTAAACCTGTTGTCTTTGACATGGATATGAGTGCTGGAGACTTTGCAGCTCTCTTCTACCTCCTCAAAGTACCTATTCAAGTGATTAATCTCAGGGTAGTTTTTTGCTTCTTCTTCTCTTTTTCCCAACAGGCTGGGCAAATGCTGCAACAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

559

Amino Acids

62.32

Weight (kDa)

6.04

Isoelectric Point (pI)

33.34

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 557
AccB7I CCANNNNNTGG 1 cut(s) 1505
AciI CCGC 3 cut(s) 94, 1046, 1100
AclI AACGTT 1 cut(s) 22
AclWI GGATC 6 cut(s) 67, 335, 743, 806, 1250, 1330
AcsI RAATTY 4 cut(s) 715, 1094, 1397, 1502
AcyI GRCGYC 1 cut(s) 1185
AfaI GTAC 3 cut(s) 170, 343, 1593
AfiI CCNNNNNNNGG 3 cut(s) 359, 496, 1505
AjiI CACGTC 1 cut(s) 298
AjnI CCWGG 5 cut(s) 241, 495, 751, 828, 1413
AluBI AGCT 5 cut(s) 83, 1011, 1037, 1410, 1571
AluI AGCT 5 cut(s) 83, 1011, 1037, 1410, 1571
Alw21I GWGCWC 2 cut(s) 598, 657
Alw26I GTCTC 2 cut(s) 167, 1554
AlwI GGATC 6 cut(s) 67, 335, 743, 806, 1250, 1330
AlwNI CAGNNNCTG 2 cut(s) 215, 1331
AoxI GGCC 3 cut(s) 110, 472, 912
ApeKI GCWGC 3 cut(s) 821, 1568, 1666
ApoI RAATTY 4 cut(s) 715, 1094, 1397, 1502
AseI ATTAAT 1 cut(s) 1608
AspS9I GGNCC 3 cut(s) 234, 569, 1372
AsuC2I CCSGG 1 cut(s) 710
AsuHPI GGTGA 4 cut(s) 107, 329, 821, 847
AsuNHI GCTAGC 1 cut(s) 83
AvaII GGWCC 3 cut(s) 234, 569, 1372
BaeI ACNNNNGTAYC 2 cut(s) 123, 156
BauI CACGAG 2 cut(s) 975, 1006
BbsI GAAGAC 2 cut(s) 754, 946
Bbv12I GWGCWC 2 cut(s) 598, 657
BbvI GCAGC 3 cut(s) 808, 1580, 1653
BccI CCATC 5 cut(s) 277, 332, 1154, 1175, 1292
BciT130I CCWGG 5 cut(s) 243, 497, 753, 830, 1415
BcnI CCSGG 1 cut(s) 710
BcoDI GTCTC 2 cut(s) 167, 1554
BfaI CTAG 3 cut(s) 47, 84, 441
BfmI CTRYAG 2 cut(s) 432, 564
BfuAI ACCTGC 1 cut(s) 557
BisI GCNGC 3 cut(s) 822, 1569, 1667
BlpI GCTNAGC 1 cut(s) 537
BlsI GCNGC 3 cut(s) 823, 1570, 1668
Bme1390I CCNGG 6 cut(s) 243, 497, 710, 753, 830, 1415
Bme18I GGWCC 3 cut(s) 234, 569, 1372
BmgBI CACGTC 1 cut(s) 298
BmgT120I GGNCC 3 cut(s) 234, 569, 1372
BmiI GGNNCC 2 cut(s) 571, 1374
BmrFI CCNGG 6 cut(s) 243, 497, 710, 753, 830, 1415
BmsI GCATC 4 cut(s) 33, 265, 398, 862
BmtI GCTAGC 1 cut(s) 87
BpiI GAAGAC 2 cut(s) 754, 946
BplI GAGNNNNNCTC 2 cut(s) 499, 531
BpmI CTGGAG 2 cut(s) 1436, 1578
Bpu1102I GCTNAGC 1 cut(s) 537
BpuMI CCSGG 1 cut(s) 710
BsaHI GRCGYC 1 cut(s) 1185
BsaI GGTCTC 1 cut(s) 167
BsaJI CCNNGG 4 cut(s) 495, 496, 734, 805
BsaWI WCCGGW 1 cut(s) 117
Bsc4I CCNNNNNNNGG 3 cut(s) 359, 496, 1505
Bse1I ACTGG 2 cut(s) 703, 958
Bse3DI GCAATG 1 cut(s) 763
BseBI CCWGG 5 cut(s) 243, 497, 753, 830, 1415
BseDI CCNNGG 4 cut(s) 495, 496, 734, 805
BseGI GGATG 4 cut(s) 413, 460, 877, 1303
BseLI CCNNNNNNNGG 3 cut(s) 359, 496, 1505
BseMI GCAATG 1 cut(s) 763
BseMII CTCAG 4 cut(s) 490, 551, 783, 1627
BseNI ACTGG 2 cut(s) 703, 958
BseRI GAGGAG 1 cut(s) 1574
BseXI GCAGC 3 cut(s) 808, 1580, 1653
BseYI CCCAGC 1 cut(s) 1655
BsgI GTGCAG 1 cut(s) 59
BshFI GGCC 3 cut(s) 112, 474, 914
BsiHKAI GWGCWC 2 cut(s) 598, 657
BsiSI CCGG 2 cut(s) 118, 710
BslFI GGGAC 3 cut(s) 403, 555, 1260
BslI CCNNNNNNNGG 3 cut(s) 359, 496, 1505
BsmAI GTCTC 2 cut(s) 167, 1554
BsmFI GGGAC 3 cut(s) 403, 555, 1260
BsnI GGCC 3 cut(s) 112, 474, 914
Bso31I GGTCTC 1 cut(s) 167
Bsp1286I GDGCHC 2 cut(s) 598, 657
Bsp1407I TGTACA 1 cut(s) 168
Bsp143I GATC 8 cut(s) 59, 188, 327, 683, 748, 811, 1255, 1322
Bsp1720I GCTNAGC 1 cut(s) 537
BspACI CCGC 3 cut(s) 94, 1046, 1100
BspANI GGCC 3 cut(s) 112, 474, 914
BspCNI CTCAG 4 cut(s) 489, 550, 784, 1626
BspLI GGNNCC 2 cut(s) 571, 1374
BspMAI CTGCAG 1 cut(s) 568
BspMI ACCTGC 1 cut(s) 557
BspOI GCTAGC 1 cut(s) 87
BspPI GGATC 6 cut(s) 67, 335, 743, 806, 1250, 1330
BspQI GCTCTTC 1 cut(s) 917
BspTNI GGTCTC 1 cut(s) 167
BsrDI GCAATG 1 cut(s) 763
BsrGI TGTACA 1 cut(s) 168
BsrI ACTGG 2 cut(s) 703, 958
BssECI CCNNGG 4 cut(s) 495, 496, 734, 805
BssMI GATC 8 cut(s) 59, 188, 327, 683, 748, 811, 1255, 1322
BssNI GRCGYC 1 cut(s) 1185
BssSI CACGAG 2 cut(s) 975, 1006
BssT1I CCWWGG 1 cut(s) 805
Bst2BI CACGAG 2 cut(s) 975, 1006
Bst2UI CCWGG 5 cut(s) 243, 497, 753, 830, 1415
Bst4CI ACNGT 4 cut(s) 100, 217, 580, 1126
Bst6I CTCTTC 2 cut(s) 917, 1580
BstACI GRCGYC 1 cut(s) 1185
BstAPI GCANNNNNTGC 1 cut(s) 1666
BstAUI TGTACA 1 cut(s) 168
BstC8I GCNNGC 2 cut(s) 85, 110
BstDEI CTNAG 6 cut(s) 476, 537, 792, 1207, 1250, 1613
BstENI CCTNNNNNAGG 1 cut(s) 494
BstF5I GGATG 4 cut(s) 413, 460, 877, 1303
BstKTI GATC 8 cut(s) 62, 191, 330, 686, 751, 814, 1258, 1325
BstMAI GTCTC 2 cut(s) 167, 1554
BstMBI GATC 8 cut(s) 59, 188, 327, 683, 748, 811, 1255, 1322
BstMWI GCNNNNNNNGC 3 cut(s) 1043, 1355, 1666
BstNI CCWGG 5 cut(s) 243, 497, 753, 830, 1415
BstNSI RCATGY 1 cut(s) 251
BstSCI CCNGG 6 cut(s) 241, 495, 708, 751, 828, 1413
BstSFI CTRYAG 2 cut(s) 432, 564
BstV1I GCAGC 3 cut(s) 808, 1580, 1653
BstV2I GAAGAC 2 cut(s) 754, 946
BstX2I RGATCY 1 cut(s) 1255
BstXI CCANNNNNNTGG 1 cut(s) 1655
BstYI RGATCY 1 cut(s) 1255
BsuRI GGCC 3 cut(s) 112, 474, 914
BtrI CACGTC 1 cut(s) 298
BtsCI GGATG 4 cut(s) 413, 460, 877, 1303
BtsI GCAGTG 2 cut(s) 216, 746
BtsIMutI CAGTG 2 cut(s) 216, 746
BveI ACCTGC 1 cut(s) 557
Cac8I GCNNGC 2 cut(s) 85, 110
CaiI CAGNNNCTG 2 cut(s) 215, 1331
Cfr13I GGNCC 3 cut(s) 234, 569, 1372
CseI GACGC 1 cut(s) 1174
CsiI ACCWGGT 1 cut(s) 828
Csp6I GTAC 3 cut(s) 169, 342, 1592
CviAII CATG 7 cut(s) 248, 280, 667, 1018, 1057, 1235, 1543
CviQI GTAC 3 cut(s) 169, 342, 1592
DdeI CTNAG 6 cut(s) 476, 537, 792, 1207, 1250, 1613
DpnI GATC 8 cut(s) 61, 190, 329, 685, 750, 813, 1257, 1324
DpnII GATC 8 cut(s) 59, 188, 327, 683, 748, 811, 1255, 1322
Eam1104I CTCTTC 2 cut(s) 917, 1580
EarI CTCTTC 2 cut(s) 917, 1580
Eco130I CCWWGG 1 cut(s) 805
Eco147I AGGCCT 2 cut(s) 112, 914
Eco31I GGTCTC 1 cut(s) 167
Eco32I GATATC 1 cut(s) 368
Eco47I GGWCC 3 cut(s) 234, 569, 1372
EcoNI CCTNNNNNAGG 1 cut(s) 494
EcoO109I RGGNCCY 2 cut(s) 569, 1372
EcoRI GAATTC 1 cut(s) 1397
EcoRII CCWGG 5 cut(s) 241, 495, 751, 828, 1413
EcoRV GATATC 1 cut(s) 368
EcoT14I CCWWGG 1 cut(s) 805
ErhI CCWWGG 1 cut(s) 805
FaeI CATG 7 cut(s) 251, 283, 670, 1021, 1060, 1238, 1546
FalI AAGNNNNNCTT 4 cut(s) 769, 801, 1190, 1222
FaqI GGGAC 3 cut(s) 403, 555, 1260
FatI CATG 7 cut(s) 247, 279, 666, 1017, 1056, 1234, 1542
FauNDI CATATG 1 cut(s) 937
Fnu4HI GCNGC 3 cut(s) 822, 1569, 1667
FokI GGATG 4 cut(s) 420, 467, 884, 1310
Fsp4HI GCNGC 3 cut(s) 822, 1569, 1667
FspBI CTAG 3 cut(s) 47, 84, 441
GluI GCNGC 3 cut(s) 822, 1569, 1667
GsaI CCCAGC 1 cut(s) 1659
GsuI CTGGAG 2 cut(s) 1436, 1578
HaeIII GGCC 3 cut(s) 112, 474, 914
HapII CCGG 2 cut(s) 118, 710
HgaI GACGC 1 cut(s) 1174
Hin1I GRCGYC 1 cut(s) 1185
Hin1II CATG 7 cut(s) 251, 283, 670, 1021, 1060, 1238, 1546
HindIII AAGCTT 1 cut(s) 1408
HinfI GANTC 4 cut(s) 121, 461, 1025, 1449
HpaII CCGG 2 cut(s) 118, 710
HphI GGTGA 4 cut(s) 107, 329, 821, 847
Hpy166II GTNNAC 1 cut(s) 1526
Hpy188I TCNGA 5 cut(s) 193, 479, 588, 1327, 1425
Hpy188III TCNNGA 4 cut(s) 175, 869, 977, 1370
Hpy8I GTNNAC 1 cut(s) 1526
HpyAV CCTTC 2 cut(s) 98, 314
HpyCH4III ACNGT 4 cut(s) 100, 217, 580, 1126
HpyCH4IV ACGT 2 cut(s) 22, 297
HpyF10VI GCNNNNNNNGC 3 cut(s) 1043, 1355, 1666
HpyF3I CTNAG 6 cut(s) 476, 537, 792, 1207, 1250, 1613
HpySE526I ACGT 2 cut(s) 22, 297
Hsp92I GRCGYC 1 cut(s) 1185
Hsp92II CATG 7 cut(s) 251, 283, 670, 1021, 1060, 1238, 1546
Kzo9I GATC 8 cut(s) 59, 188, 327, 683, 748, 811, 1255, 1322
LguI GCTCTTC 1 cut(s) 917
LmnI GCTCC 3 cut(s) 80, 501, 593
Lsp1109I GCAGC 3 cut(s) 808, 1580, 1653
LweI GCATC 4 cut(s) 33, 265, 398, 862
MabI ACCWGGT 1 cut(s) 828
MaeI CTAG 3 cut(s) 47, 84, 441
MaeII ACGT 2 cut(s) 22, 297
MaeIII GTNAC 5 cut(s) 211, 853, 1153, 1315, 1486
MalI GATC 8 cut(s) 61, 190, 329, 685, 750, 813, 1257, 1324
MboI GATC 8 cut(s) 59, 188, 327, 683, 748, 811, 1255, 1322
MflI RGATCY 1 cut(s) 1255
MhlI GDGCHC 2 cut(s) 598, 657
MmeI TCCRAC 2 cut(s) 183, 286
MseI TTAA 4 cut(s) 183, 1389, 1457, 1608
MslI CAYNNNNRTG 2 cut(s) 660, 1547
MspA1I CMGCKG 1 cut(s) 1037
MspI CCGG 2 cut(s) 118, 710
MspR9I CCNGG 6 cut(s) 243, 497, 710, 753, 830, 1415
MvaI CCWGG 5 cut(s) 243, 497, 753, 830, 1415
MwoI GCNNNNNNNGC 3 cut(s) 1043, 1355, 1666
NciI CCSGG 1 cut(s) 710
NdeI CATATG 1 cut(s) 937
NdeII GATC 8 cut(s) 59, 188, 327, 683, 748, 811, 1255, 1322
NheI GCTAGC 1 cut(s) 83
NlaIII CATG 7 cut(s) 251, 283, 670, 1021, 1060, 1238, 1546
NlaIV GGNNCC 2 cut(s) 571, 1374
NmeAIII GCCGAG 1 cut(s) 715
NmuCI GTSAC 3 cut(s) 211, 853, 1486
NspI RCATGY 1 cut(s) 251
PasI CCCWGGG 1 cut(s) 496
PceI AGGCCT 2 cut(s) 112, 914
PciSI GCTCTTC 1 cut(s) 917
PfeI GAWTC 4 cut(s) 121, 461, 1025, 1449
PflMI CCANNNNNTGG 1 cut(s) 1505
PfoI TCCNGGA 2 cut(s) 241, 1413
PkrI GCNGC 3 cut(s) 823, 1570, 1668
PpuMI RGGWCCY 2 cut(s) 569, 1372
PshBI ATTAAT 1 cut(s) 1608
Psp1406I AACGTT 1 cut(s) 22
Psp5II RGGWCCY 2 cut(s) 569, 1372
Psp6I CCWGG 5 cut(s) 241, 495, 751, 828, 1413
PspFI CCCAGC 1 cut(s) 1655
PspGI CCWGG 5 cut(s) 241, 495, 751, 828, 1413
PspN4I GGNNCC 2 cut(s) 571, 1374
PspPI GGNCC 3 cut(s) 234, 569, 1372
PspPPI RGGWCCY 2 cut(s) 569, 1372
PstI CTGCAG 1 cut(s) 568
PstNI CAGNNNCTG 2 cut(s) 215, 1331
PsuI RGATCY 1 cut(s) 1255
PvuII CAGCTG 1 cut(s) 1037
RsaI GTAC 3 cut(s) 170, 343, 1593
RsaNI GTAC 3 cut(s) 169, 342, 1592
RseI CAYNNNNRTG 2 cut(s) 660, 1547
SapI GCTCTTC 1 cut(s) 917
SaqAI TTAA 4 cut(s) 183, 1389, 1457, 1608
SatI GCNGC 3 cut(s) 822, 1569, 1667
Sau3AI GATC 8 cut(s) 59, 188, 327, 683, 748, 811, 1255, 1322
Sau96I GGNCC 3 cut(s) 234, 569, 1372
ScrFI CCNGG 6 cut(s) 243, 497, 710, 753, 830, 1415
SduI GDGCHC 2 cut(s) 598, 657
SexAI ACCWGGT 1 cut(s) 828
SfaNI GCATC 4 cut(s) 33, 265, 398, 862
SfcI CTRYAG 2 cut(s) 432, 564
SinI GGWCC 3 cut(s) 234, 569, 1372
SmiMI CAYNNNNRTG 2 cut(s) 660, 1547
SseBI AGGCCT 2 cut(s) 112, 914
SsiI CCGC 3 cut(s) 94, 1046, 1100
SspI AATATT 1 cut(s) 649
SspMI CTAG 3 cut(s) 47, 84, 441
StuI AGGCCT 2 cut(s) 112, 914
StyD4I CCNGG 6 cut(s) 241, 495, 708, 751, 828, 1413
StyI CCWWGG 1 cut(s) 805
TaaI ACNGT 4 cut(s) 100, 217, 580, 1126
TaiI ACGT 2 cut(s) 25, 300
TaqI TCGA 4 cut(s) 129, 448, 523, 686
TaqII GACCGA 1 cut(s) 149
TatI WGTACW 1 cut(s) 168
TfiI GAWTC 4 cut(s) 121, 461, 1025, 1449
Tru1I TTAA 4 cut(s) 183, 1389, 1457, 1608
Tru9I TTAA 4 cut(s) 183, 1389, 1457, 1608
TscAI CASTG 2 cut(s) 216, 746
TseFI GTSAC 3 cut(s) 211, 853, 1486
TseI GCWGC 3 cut(s) 821, 1568, 1666
Tsp45I GTSAC 3 cut(s) 211, 853, 1486
TspDTI ATGAA 6 cut(s) 638, 1006, 1017, 1107, 1130, 1155
TspRI CASTG 2 cut(s) 216, 746
Van91I CCANNNNNTGG 1 cut(s) 1505
VpaK11BI GGWCC 3 cut(s) 234, 569, 1372
VspI ATTAAT 1 cut(s) 1608
XagI CCTNNNNNAGG 1 cut(s) 494
XapI RAATTY 4 cut(s) 715, 1094, 1397, 1502
XceI RCATGY 1 cut(s) 251
XspI CTAG 3 cut(s) 47, 84, 441
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.