Rorug02G0649300

Inosine-uridine preferring nucleoside hydrolase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0001810
Physical Location & Seq
Reverse (-)
75832319 .. 75833465
1147 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0649300.1

Sequence Viewer

Length: 312 bp
ATGGATTGTGTTTCTGGGTTTGCTTCGGACGCCGTCGAAATTGACGTTGCCGGCGGTTGTTTTGGCTTCCTCGAATCGACTAGGCTGACTCCGGTTTGCTGTGTTCTTCGAAGGAGAGCCGACCTGCAATTTGGGATTTTGTTTGTGATCGAGTTTGATGGCAAGGACTCCAGCTACCCAAGGAACGGAAGGTTCGTGATCTCCGAACAACGTGAGATGGTAAAGCTTCGAAATCCAGTTAACGTGCGTATAAGATTGTTGATGGCGGTGTGTGAGAGCGGAAAGGTGGTCGATGACTTCCTTGGGGATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
IU_nuc_hydro

Protein Analysis

103

Amino Acids

11.47

Weight (kDa)

5.11

Isoelectric Point (pI)

46.0

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 132
AccBSI CCGCTC 1 cut(s) 279
AciI CCGC 3 cut(s) 54, 266, 279
AcyI GRCGYC 1 cut(s) 30
AfiI CCNNNNNNNGG 1 cut(s) 185
AluBI AGCT 2 cut(s) 174, 226
AluI AGCT 2 cut(s) 174, 226
ArsI GACNNNNNNTTYG 2 cut(s) 113, 145
AsuII TTCGAA 2 cut(s) 109, 229
BccI CCATC 3 cut(s) 152, 211, 256
BceAI ACGGC 1 cut(s) 17
BfaI CTAG 1 cut(s) 81
BfuAI ACCTGC 1 cut(s) 132
BpmI CTGGAG 1 cut(s) 154
Bpu14I TTCGAA 2 cut(s) 109, 229
BsaHI GRCGYC 1 cut(s) 30
BsaJI CCNNGG 2 cut(s) 179, 301
BsaWI WCCGGW 1 cut(s) 91
Bsc4I CCNNNNNNNGG 1 cut(s) 185
Bse118I RCCGGY 1 cut(s) 50
Bse1I ACTGG 1 cut(s) 236
BseDI CCNNGG 2 cut(s) 179, 301
BseLI CCNNNNNNNGG 1 cut(s) 185
BseNI ACTGG 1 cut(s) 236
BsiSI CCGG 2 cut(s) 51, 92
BslI CCNNNNNNNGG 1 cut(s) 185
Bsp119I TTCGAA 2 cut(s) 109, 229
Bsp143I GATC 2 cut(s) 147, 198
BspACI CCGC 3 cut(s) 54, 266, 279
BspMI ACCTGC 1 cut(s) 132
BspT104I TTCGAA 2 cut(s) 109, 229
BsrBI CCGCTC 1 cut(s) 279
BsrFI RCCGGY 1 cut(s) 50
BsrI ACTGG 1 cut(s) 236
BssAI RCCGGY 1 cut(s) 50
BssECI CCNNGG 2 cut(s) 179, 301
BssMI GATC 2 cut(s) 147, 198
BssNI GRCGYC 1 cut(s) 30
BssT1I CCWWGG 2 cut(s) 179, 301
BstACI GRCGYC 1 cut(s) 30
BstBI TTCGAA 2 cut(s) 109, 229
BstC8I GCNNGC 1 cut(s) 52
BstKTI GATC 2 cut(s) 150, 201
BstMBI GATC 2 cut(s) 147, 198
BstMWI GCNNNNNNNGC 1 cut(s) 29
BveI ACCTGC 1 cut(s) 132
Cac8I GCNNGC 1 cut(s) 52
Cfr10I RCCGGY 1 cut(s) 50
CseI GACGC 1 cut(s) 38
CviJI RGCY 5 cut(s) 66, 85, 119, 174, 226
CviKI_1 RGCY 5 cut(s) 66, 85, 119, 174, 226
DpnI GATC 2 cut(s) 149, 200
DpnII GATC 2 cut(s) 147, 198
Eco130I CCWWGG 2 cut(s) 179, 301
EcoT14I CCWWGG 2 cut(s) 179, 301
ErhI CCWWGG 2 cut(s) 179, 301
FaiI YATR 1 cut(s) 251
FspBI CTAG 1 cut(s) 81
GsuI CTGGAG 1 cut(s) 154
HapII CCGG 2 cut(s) 51, 92
HgaI GACGC 1 cut(s) 38
Hin1I GRCGYC 1 cut(s) 30
HincII GTYRAC 1 cut(s) 241
HindII GTYRAC 1 cut(s) 241
HindIII AAGCTT 1 cut(s) 224
HinfI GANTC 3 cut(s) 74, 88, 167
HpaI GTTAAC 1 cut(s) 241
HpaII CCGG 2 cut(s) 51, 92
Hpy166II GTNNAC 1 cut(s) 241
Hpy188I TCNGA 2 cut(s) 28, 205
Hpy188III TCNNGA 1 cut(s) 196
Hpy8I GTNNAC 1 cut(s) 241
Hpy99I CGWCG 1 cut(s) 38
HpyAV CCTTC 2 cut(s) 105, 183
HpyCH4IV ACGT 3 cut(s) 45, 211, 243
HpyCH4V TGCA 1 cut(s) 127
HpyF10VI GCNNNNNNNGC 1 cut(s) 29
HpySE526I ACGT 3 cut(s) 45, 211, 243
Hsp92I GRCGYC 1 cut(s) 30
KroI GCCGGC 1 cut(s) 50
KroNI GCCGGC 1 cut(s) 52
KspAI GTTAAC 1 cut(s) 241
Kzo9I GATC 2 cut(s) 147, 198
LpnPI CCDG 5 cut(s) 64, 105, 137, 184, 249
MaeI CTAG 1 cut(s) 81
MaeII ACGT 3 cut(s) 45, 211, 243
MalI GATC 2 cut(s) 149, 200
MbiI CCGCTC 1 cut(s) 279
MboI GATC 2 cut(s) 147, 198
MboII GAAGA 1 cut(s) 98
MluCI AATT 2 cut(s) 39, 128
MlyI GAGTC 2 cut(s) 82, 161
MnlI CCTC 1 cut(s) 80
MroNI GCCGGC 1 cut(s) 50
MseI TTAA 1 cut(s) 240
MspI CCGG 2 cut(s) 51, 92
MwoI GCNNNNNNNGC 1 cut(s) 29
NaeI GCCGGC 1 cut(s) 52
NdeII GATC 2 cut(s) 147, 198
NgoMIV GCCGGC 1 cut(s) 50
NspV TTCGAA 2 cut(s) 109, 229
PcsI WCGNNNNNNNCGW 3 cut(s) 42, 192, 201
PdiI GCCGGC 1 cut(s) 52
PfeI GAWTC 1 cut(s) 74
PflFI GACNNNGTC 1 cut(s) 32
PleI GAGTC 2 cut(s) 82, 161
PpsI GAGTC 2 cut(s) 82, 161
PsyI GACNNNGTC 1 cut(s) 32
SaqAI TTAA 1 cut(s) 240
Sau3AI GATC 2 cut(s) 147, 198
SchI GAGTC 2 cut(s) 82, 161
SetI ASST 8 cut(s) 48, 126, 176, 194, 214, 228, 246, 288
SfuI TTCGAA 2 cut(s) 109, 229
Sse9I AATT 2 cut(s) 39, 128
SsiI CCGC 3 cut(s) 54, 266, 279
SspMI CTAG 1 cut(s) 81
StyI CCWWGG 2 cut(s) 179, 301
TaiI ACGT 3 cut(s) 48, 214, 246
TaqI TCGA 7 cut(s) 36, 72, 77, 109, 150, 229, 291
TasI AATT 2 cut(s) 39, 128
TfiI GAWTC 1 cut(s) 74
Tru1I TTAA 1 cut(s) 240
Tru9I TTAA 1 cut(s) 240
TspGWI ACGGA 1 cut(s) 201
Tth111I GACNNNGTC 1 cut(s) 32
XspI CTAG 1 cut(s) 81
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.