Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr13

Orthogroup ID

OG0001810

Physical Location & Seq

Genomic Coordinates Forward (+)

14587361 .. 14594072

Gene Structure 6712 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD13G1176200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2688 bp

ATGTTGTTGCAGAAGCAGAAACGTTTTGATTGGTTGGTGCAGATGCTAGTTGTTGTGGGATCAGTATTAGTTGTGATTGGAGCTACCAATTTGCGGACTGTGGAAGGCAGGCCTCACCGGATTCTTTTCGATACAGATGTTGATACCGATGATTTATTCGGTCTCTTGTACATCTTGAAGCTTAACAGATCAGAGTTTGAGTTGGAGGCAGTGACTGTAAATGCAAATGCTTGGACCAATCCTGGGCATGCTGTGCATCAAATCTATGACATTTTATACATGATGGGGCGTGATGACGTGGCAGTTGGAGTGGGTGGTGAAGGTGGGATCAAAGAAGATGGTACAATTTTGCCAAATGTCGGTGGATATCTTCCAATTATTGAACAGGGGACTACGACAGCAGGAGGATGCAGATATAGACAAGCCATTCCTGTAGGTGCTAGAGGTCGGTTGGATATTGATTCTAATTTTGGCCTCAGAAAATCTTTCCTCCCCCAGGGGAGCAGGAGATATACTCCCTTTCGACAACCTACTGCTCAGCAAGTGATGATTGACAACATATCTGCAGGTCCCATTACTGTATTTCTGATAGGAGCACACACAAACTTTGCCCTTTTCCTTATGAACAATCCACACCTAAAGAAGAATATTGAGCACATTTATGTCATGGGTGGTGGTGTGAGATCGAAAAACCCTACTGGTTGTTGCCCGGAAAATTCTACGTCGTGTGTTCCTCGGCAGTGTGGTGATCCTGGCAATGTCTTCACAGACTACACAAGTAATCCTTATGCTGAGTTCAATTTCCTTGGTGATCCCTTTGCTGCATACCAGGTTATACATTCTGGGATTCCAGTCACCCTTGTTCCTCTGGATGCAACAAACACCATTCCCATTAGTCAAAACTTCTTTGAGGCCCTTGAGAAGAGCCAGAACACATATGAGGCACAATATGTCTTCCAGTCCTTGAAAATGGCTTGTGATACTTGGTTTGACAAACAATTCTACACGAGCTATTTCATGTGGGATTCATTTACAGCTGGTGTGGCGGTATCAATCATGCGAAACAACTTGAATAACCCTAATGGAGAAAATGAATTTGCGGAAATGGAGTATATGAATATAACTGTGATTACTTCAAATGAACCTTATGGAGTAACTGATGGCTCTAATCCTTTCTTTGATGGCCTCAAAGTTCCAAAGTTCAACTTAGACAAAAATGGTGTGCATAGTGGTCATGTTCAAAAGGGACTAAGAGATCCATTTTGCATTGGGGAGAATGGCAAAGGGAAATGCAGGGATGGTTATACAGATGAAGTAACAGGATCAGAGGCTGTGTCTGTGCTTGTTGCTACAAAAGCCAAACCAAATCAGGACCCTCAAAGCCCACTTAACAGAGAATTCTTCGTAAGCTTCCTGGAGGTTCTGAACAACCCCAAACAGAAAGGGAGATTCAATTTAACTACACAATTTCCATTTTACAAGGAAGTGACATATAAACCAGAATTTGGGAACAAAAAACTTGGTAAACCTGTTGTCTTTGACATGGATATGAGTGCTGGAGACTTTGCAGCTCTCTTCTACCTCCTCAAAGTACCTATTCAAGTGATTAATCTCAAGGCAATAATAGTGAGCCCAACAGGCTGGGCAAATGCTGCAACAATAGATGTGATTTATGACTTGCTGCATATGATGGGCCGTGATGACATCCCTGTAGGTCTTGGAGATGTATTTGCTACGAACCAGTCTGATCCAATTTTCCCTGCTGTTGGAGGCTGCAAATACCAACAGGCCATCCCTCATGGCAACGGTGGATTGCTGGACTCAGACACTCTCTACGGCCTTGCTCGTGATTTGCCACGAAGCCTACGAAGGTATACAACAGAAAATTCTTTAGAACACGGAGCCCCGAAGGATACAGATCACCCTGAGCTCAGACAACCACTGGCATTGGAGGTTTGTGAGACTCTGGTGAAAACACTGGAACCCGGATCCAAGATTACCATATTGACCAATGGACCCTTGACCAATTTAGCTAAGATGATCTCGTCCAAAAAGAACACCGTCTCTTTAATACAGGATGTGTATATTGTTGGAGGGCATATCAGCAGCAATGACAAGGACAAAGGAAATGTGTTTACTATTCCTTCCAATGAATATGCAGAGTTCAATATGTTTCTTGACCCTTTGGCTGCAAAGGCAGTGTTTGAGTCCTCACTTAACATCACACTCATTCCCCTCGGCATCCAACGCGAAGTTGGTTCGTTTTCCAAAATCTTAGAACGGATGCGCCGGAAGAAGAAGACACCCGAGGCCCTTTTTGTCCGGCGGTTGCTGTCAAGGCTCTACCGGTTGCAGCAATTGCACCATAGATATCATCACATGCAAACTTTCTTGGGGGAAATTCTTGGTGCAGTTCTCTTAGCTGGTGATTCCCATCTGAATCAAACCTTCCAAGCGAAGCCCATCAAAGTTTATGCCGAAGGTGTTGAATCCAGAGATGGACAGCTTTTGATTGACGAAAATCAACGGAAACTGGTCAGGGTATTGGACAGTGTAAATCCTCAGGCCTATTACAATCTTTTTGTAGACCGGCTTAGCGATTCAAACCAGTCAGCTATACTGGGTAGTTTTGAAGAACAAGTAAAATTCTGGCGTAAACCGCCGAATCAAACCGAGACCGCAGCGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko03013 map03013

Pfam Domains

Protein Families

IU_nuc_hydro

Protein Analysis

896

Amino Acids

99.63

Weight (kDa)

6.29

Isoelectric Point (pI)

33.65

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
IU_nuc_hydro	PF01156	41 - 383	1.4e-35	Inosine-uridine preferring nucleoside hydrolase
IU_nuc_hydro	PF01156	511 - 858	5e-37	Inosine-uridine preferring nucleoside hydrolase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001810)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G18860 AT5G18860 AT5G18870 AT5G18890
fragaria_vesca	FvH4_4g16830 FvH4_4g16830 FvH4_4g16850 FvH4_4g16850 FvH4_4g16850 FvH4_4g16850 FvH4_4g16850
malus_domestica	MD12G1227000.v1.1 MD13G1176200.v1.1 MD16G1178000.v1.1
prunus_persica	Prupe.1G145300_v2.0.a1 Prupe.1G145300_v2.0.a1 Prupe.6G332600_v2.0.a1 Prupe.6G332600_v2.0.a1
pyrus_communis	pycom12g21140 pycom12g21170 pycom13g15200 pycom16g14950
rosa_chinensis	RchiOBHm_Chr3g0453471 RchiOBHm_Chr4g0420411 RchiOBHm_Chr4g0420421
rosa_laevigata	RLG00000007765 RLG00000025511
rosa_multiflora	Rmu_sc0000510.1_g000010 Rmu_sc0002248.1_g000022
rosa_roxburghii	Rroxscaffold_5G00363050 Rroxscaffold_6G00430440
rosa_rugosa	Rorug02G0649300 Rorug04G0163700
rosa_samantha	Rh3AG052100 Rh3AG052300 Rh3BG053600 Rh3BG053700 Rh3CG052900 Rh3CG053100 Rh3DG053700 Rh3DG053900 Rh4AG225200 Rh4BG228000 Rh4CG239500 Rh4DG223700
rosa_wichuraiana	Rw3G004020 Rw4G019440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	557
AccB7I	CCANNNNNTGG	1 cut(s)	1505
AccI	GTMKAC	2 cut(s)	1874, 2586
AccII	CGCG	1 cut(s)	2250
AciI	CCGC	6 cut(s)	94, 1046, 1100, 2326, 2660, 2679
AclI	AACGTT	1 cut(s)	22
AclWI	GGATC	9 cut(s)	67, 335, 743, 806, 1250, 1330, 1742, 1983, 1996
AcsI	RAATTY	7 cut(s)	715, 1094, 1397, 1502, 1885, 2400, 2645
AfaI	GTAC	3 cut(s)	170, 343, 1593
AfiI	CCNNNNNNNGG	6 cut(s)	93, 243, 359, 496, 1505, 1766
AgeI	ACCGGT	1 cut(s)	2346
AjiI	CACGTC	1 cut(s)	298
AjnI	CCWGG	5 cut(s)	241, 495, 751, 828, 1413
Alw21I	GWGCWC	3 cut(s)	598, 657, 1932
Alw26I	GTCTC	5 cut(s)	167, 1554, 1955, 2068, 2669
AlwI	GGATC	9 cut(s)	67, 335, 743, 806, 1250, 1330, 1742, 1983, 1996
AlwNI	CAGNNNCTG	2 cut(s)	215, 1331
Ama87I	CYCGRG	1 cut(s)	2306
AoxI	GGCC	9 cut(s)	110, 472, 912, 1183, 1693, 1788, 1837, 2310, 2565
ApeKI	GCWGC	9 cut(s)	821, 1568, 1652, 1681, 1773, 2106, 2189, 2353, 2681
ApoI	RAATTY	7 cut(s)	715, 1094, 1397, 1502, 1885, 2400, 2645
AseI	ATTAAT	1 cut(s)	1608
AsiGI	ACCGGT	1 cut(s)	2346
AspLEI	GCGC	1 cut(s)	2289
AspS9I	GGNCC	7 cut(s)	234, 569, 913, 1372, 1693, 2015, 2311
AsuC2I	CCSGG	2 cut(s)	710, 1986
AsuHPI	GGTGA	8 cut(s)	107, 329, 758, 821, 847, 1913, 1981, 2438
AvaI	CYCGRG	1 cut(s)	2306
AvaII	GGWCC	4 cut(s)	234, 569, 1372, 2015
AxyI	CCTNAGG	1 cut(s)	2562
BaeI	ACNNNNGTAYC	2 cut(s)	123, 156
BamHI	GGATCC	1 cut(s)	1988
BanII	GRGCYC	3 cut(s)	1634, 1906, 1932
BauI	CACGAG	2 cut(s)	1006, 1845
BbsI	GAAGAC	3 cut(s)	754, 946, 2306
Bbv12I	GWGCWC	3 cut(s)	598, 657, 1932
BbvI	GCAGC	8 cut(s)	808, 1580, 1639, 1668, 1760, 2118, 2176, 2365
BceAI	ACGGC	2 cut(s)	1680, 1852
BciT130I	CCWGG	5 cut(s)	243, 497, 753, 830, 1415
BciVI	GTATCC	1 cut(s)	1906
BcnI	CCSGG	2 cut(s)	710, 1986
BcoDI	GTCTC	5 cut(s)	167, 1554, 1955, 2068, 2669
BfaI	CTAG	2 cut(s)	47, 441
BfmI	CTRYAG	3 cut(s)	432, 564, 1710
BfuAI	ACCTGC	1 cut(s)	557
BfuI	GTATCC	1 cut(s)	1906
BglI	GCCNNNNNGGC	1 cut(s)	1638
BisI	GCNGC	9 cut(s)	822, 1569, 1653, 1682, 1774, 2107, 2190, 2354, 2682
BlpI	GCTNAGC	2 cut(s)	537, 2594
BlsI	GCNGC	9 cut(s)	823, 1570, 1654, 1683, 1775, 2108, 2191, 2355, 2683
Bme1390I	CCNGG	7 cut(s)	243, 497, 710, 753, 830, 1415, 1986
Bme18I	GGWCC	4 cut(s)	234, 569, 1372, 2015
BmeT110I	CYCGRG	1 cut(s)	2306
BmgBI	CACGTC	1 cut(s)	298
BmgT120I	GGNCC	7 cut(s)	234, 569, 913, 1372, 1693, 2015, 2311
BmiI	GGNNCC	6 cut(s)	571, 1374, 1903, 1983, 1990, 2017
BmrFI	CCNGG	7 cut(s)	243, 497, 710, 753, 830, 1415, 1986
BmrI	ACTGGG	1 cut(s)	2630
BmsI	GCATC	6 cut(s)	33, 265, 398, 862, 2250, 2274
BmuI	ACTGGG	1 cut(s)	2630
BpiI	GAAGAC	3 cut(s)	754, 946, 2306
BplI	GAGNNNNNCTC	2 cut(s)	499, 531
BpmI	CTGGAG	2 cut(s)	1436, 1578
Bpu10I	CCTNAGC	1 cut(s)	1926
Bpu1102I	GCTNAGC	2 cut(s)	537, 2594
BpuEI	CTTGAG	2 cut(s)	938, 1598
BpuMI	CCSGG	2 cut(s)	710, 1986
BsaBI	GATNNNNATC	2 cut(s)	1917, 2433
BsaI	GGTCTC	2 cut(s)	167, 2669
BsaJI	CCNNGG	7 cut(s)	242, 495, 496, 734, 805, 2236, 2307
BsaWI	WCCGGW	2 cut(s)	117, 2346
Bsc4I	CCNNNNNNNGG	6 cut(s)	93, 243, 359, 496, 1505, 1766
Bse118I	RCCGGY	2 cut(s)	2346, 2589
Bse1I	ACTGG	9 cut(s)	703, 851, 958, 1741, 1947, 1983, 2538, 2608, 2625
Bse21I	CCTNAGG	1 cut(s)	2562
Bse3DI	GCAATG	2 cut(s)	763, 2116
Bse8I	GATNNNNATC	2 cut(s)	1917, 2433
BseBI	CCWGG	5 cut(s)	243, 497, 753, 830, 1415
BseDI	CCNNGG	7 cut(s)	242, 495, 496, 734, 805, 2236, 2307
BseGI	GGATG	8 cut(s)	413, 877, 1303, 1704, 1791, 2083, 2241, 2289
BseJI	GATNNNNATC	2 cut(s)	1917, 2433
BseLI	CCNNNNNNNGG	6 cut(s)	93, 243, 359, 496, 1505, 1766
BseMI	GCAATG	2 cut(s)	763, 2116
BseMII	CTCAG	7 cut(s)	490, 551, 783, 1836, 1917, 1945, 2576
BseNI	ACTGG	9 cut(s)	703, 851, 958, 1741, 1947, 1983, 2538, 2608, 2625
BseRI	GAGGAG	1 cut(s)	1574
BseXI	GCAGC	8 cut(s)	808, 1580, 1639, 1668, 1760, 2118, 2176, 2365
BseYI	CCCAGC	1 cut(s)	1641
BsgI	GTGCAG	2 cut(s)	59, 2430
Bsh1236I	CGCG	1 cut(s)	2250
BshFI	GGCC	9 cut(s)	112, 474, 914, 1185, 1695, 1790, 1839, 2312, 2567
BshTI	ACCGGT	1 cut(s)	2346
BsiHKAI	GWGCWC	3 cut(s)	598, 657, 1932
BsiHKCI	CYCGRG	1 cut(s)	2306
BsiSI	CCGG	7 cut(s)	118, 710, 1986, 2290, 2323, 2347, 2590
BslFI	GGGAC	3 cut(s)	403, 555, 1260
BslI	CCNNNNNNNGG	6 cut(s)	93, 243, 359, 496, 1505, 1766
BsmAI	GTCTC	5 cut(s)	167, 1554, 1955, 2068, 2669
BsmBI	CGTCTC	1 cut(s)	2068
BsmFI	GGGAC	3 cut(s)	403, 555, 1260
BsnI	GGCC	9 cut(s)	112, 474, 914, 1185, 1695, 1790, 1839, 2312, 2567
Bso31I	GGTCTC	2 cut(s)	167, 2669
BsoBI	CYCGRG	1 cut(s)	2306
Bsp1286I	GDGCHC	5 cut(s)	598, 657, 1634, 1906, 1932
Bsp1407I	TGTACA	1 cut(s)	168
Bsp1720I	GCTNAGC	2 cut(s)	537, 2594
BspACI	CCGC	6 cut(s)	94, 1046, 1100, 2326, 2660, 2679
BspANI	GGCC	9 cut(s)	112, 474, 914, 1185, 1695, 1790, 1839, 2312, 2567
BspCNI	CTCAG	7 cut(s)	489, 550, 784, 1835, 1918, 1944, 2575
BspFNI	CGCG	1 cut(s)	2250
BspLI	GGNNCC	6 cut(s)	571, 1374, 1903, 1983, 1990, 2017
BspMAI	CTGCAG	1 cut(s)	568
BspMI	ACCTGC	1 cut(s)	557
BspPI	GGATC	9 cut(s)	67, 335, 743, 806, 1250, 1330, 1742, 1983, 1996
BspQI	GCTCTTC	1 cut(s)	917
BspTNI	GGTCTC	2 cut(s)	167, 2669
BsrDI	GCAATG	2 cut(s)	763, 2116
BsrFI	RCCGGY	2 cut(s)	2346, 2589
BsrGI	TGTACA	1 cut(s)	168
BsrI	ACTGG	9 cut(s)	703, 851, 958, 1741, 1947, 1983, 2538, 2608, 2625
BssAI	RCCGGY	2 cut(s)	2346, 2589
BssECI	CCNNGG	7 cut(s)	242, 495, 496, 734, 805, 2236, 2307
BssNAI	GTATAC	1 cut(s)	1875
BssSI	CACGAG	2 cut(s)	1006, 1845
BssT1I	CCWWGG	1 cut(s)	805
Bst1107I	GTATAC	1 cut(s)	1875
Bst2BI	CACGAG	2 cut(s)	1006, 1845
Bst2UI	CCWGG	5 cut(s)	243, 497, 753, 830, 1415
Bst4CI	ACNGT	7 cut(s)	100, 217, 580, 1126, 1808, 2062, 2552
Bst6I	CTCTTC	2 cut(s)	917, 1580
BstAPI	GCANNNNNTGC	3 cut(s)	253, 1652, 2359
BstAUI	TGTACA	1 cut(s)	168
BstC8I	GCNNGC	2 cut(s)	110, 249
BstENI	CCTNNNNNAGG	1 cut(s)	494
BstF5I	GGATG	8 cut(s)	413, 877, 1303, 1704, 1791, 2083, 2241, 2289
BstFNI	CGCG	1 cut(s)	2250
BstHHI	GCGC	1 cut(s)	2289
BstMAI	GTCTC	5 cut(s)	167, 1554, 1955, 2068, 2669
BstNI	CCWGG	5 cut(s)	243, 497, 753, 830, 1415
BstNSI	RCATGY	2 cut(s)	251, 2383
BstSCI	CCNGG	7 cut(s)	241, 495, 708, 751, 828, 1413, 1984
BstSFI	CTRYAG	3 cut(s)	432, 564, 1710
BstUI	CGCG	1 cut(s)	2250
BstV1I	GCAGC	8 cut(s)	808, 1580, 1639, 1668, 1760, 2118, 2176, 2365
BstV2I	GAAGAC	3 cut(s)	754, 946, 2306
BstX2I	RGATCY	2 cut(s)	1255, 1988
BstXI	CCANNNNNNTGG	1 cut(s)	1641
BstYI	RGATCY	2 cut(s)	1255, 1988
BstZ17I	GTATAC	1 cut(s)	1875
Bsu36I	CCTNAGG	1 cut(s)	2562
BsuI	GTATCC	1 cut(s)	1906
BsuRI	GGCC	9 cut(s)	112, 474, 914, 1185, 1695, 1790, 1839, 2312, 2567
BtrI	CACGTC	1 cut(s)	298
BtsCI	GGATG	8 cut(s)	413, 877, 1303, 1704, 1791, 2083, 2241, 2289
BtsI	GCAGTG	3 cut(s)	216, 746, 2205
BtsIMutI	CAGTG	6 cut(s)	216, 746, 1940, 1976, 2205, 2557
BveI	ACCTGC	1 cut(s)	557
Cac8I	GCNNGC	2 cut(s)	110, 249
CaiI	CAGNNNCTG	2 cut(s)	215, 1331
CfoI	GCGC	1 cut(s)	2289
Cfr10I	RCCGGY	2 cut(s)	2346, 2589
Cfr13I	GGNCC	7 cut(s)	234, 569, 913, 1372, 1693, 2015, 2311
CsiI	ACCWGGT	1 cut(s)	828
Csp6I	GTAC	3 cut(s)	169, 342, 1592
CspAI	ACCGGT	1 cut(s)	2346
CspCI	CAANNNNNGTGG	2 cut(s)	1929, 1964
CviAII	CATG	9 cut(s)	248, 280, 667, 1018, 1057, 1235, 1543, 1799, 2380
CviQI	GTAC	3 cut(s)	169, 342, 1592
Eam1104I	CTCTTC	2 cut(s)	917, 1580
EarI	CTCTTC	2 cut(s)	917, 1580
Ecl136II	GAGCTC	1 cut(s)	1930
Eco130I	CCWWGG	1 cut(s)	805
Eco147I	AGGCCT	2 cut(s)	112, 2567
Eco24I	GRGCYC	3 cut(s)	1634, 1906, 1932
Eco31I	GGTCTC	2 cut(s)	167, 2669
Eco32I	GATATC	2 cut(s)	368, 2372
Eco47I	GGWCC	4 cut(s)	234, 569, 1372, 2015
Eco53kI	GAGCTC	1 cut(s)	1930
Eco81I	CCTNAGG	1 cut(s)	2562
Eco88I	CYCGRG	1 cut(s)	2306
EcoICRI	GAGCTC	1 cut(s)	1930
EcoNI	CCTNNNNNAGG	1 cut(s)	494
EcoO109I	RGGNCCY	4 cut(s)	569, 913, 1372, 2311
EcoRI	GAATTC	1 cut(s)	1397
EcoRII	CCWGG	5 cut(s)	241, 495, 751, 828, 1413
EcoRV	GATATC	2 cut(s)	368, 2372
EcoT14I	CCWWGG	1 cut(s)	805
EcoT38I	GRGCYC	3 cut(s)	1634, 1906, 1932
ErhI	CCWWGG	1 cut(s)	805
Esp3I	CGTCTC	1 cut(s)	2068
FaeI	CATG	9 cut(s)	251, 283, 670, 1021, 1060, 1238, 1546, 1802, 2383
FalI	AAGNNNNNCTT	4 cut(s)	769, 801, 1190, 1222
FaqI	GGGAC	3 cut(s)	403, 555, 1260
FatI	CATG	9 cut(s)	247, 279, 666, 1017, 1056, 1234, 1542, 1798, 2379
FauNDI	CATATG	2 cut(s)	937, 1686
FblI	GTMKAC	2 cut(s)	1874, 2586
Fnu4HI	GCNGC	9 cut(s)	822, 1569, 1653, 1682, 1774, 2107, 2190, 2354, 2682
FokI	GGATG	8 cut(s)	420, 884, 1310, 1691, 1778, 2090, 2228, 2296
FriOI	GRGCYC	3 cut(s)	1634, 1906, 1932
Fsp4HI	GCNGC	9 cut(s)	822, 1569, 1653, 1682, 1774, 2107, 2190, 2354, 2682
FspBI	CTAG	2 cut(s)	47, 441
GlaI	GCGC	1 cut(s)	2288
GluI	GCNGC	9 cut(s)	822, 1569, 1653, 1682, 1774, 2107, 2190, 2354, 2682
GsaI	CCCAGC	1 cut(s)	1645
GsuI	CTGGAG	2 cut(s)	1436, 1578
HaeIII	GGCC	9 cut(s)	112, 474, 914, 1185, 1695, 1790, 1839, 2312, 2567
HapII	CCGG	7 cut(s)	118, 710, 1986, 2290, 2323, 2347, 2590
HhaI	GCGC	1 cut(s)	2289
Hin1II	CATG	9 cut(s)	251, 283, 670, 1021, 1060, 1238, 1546, 1802, 2383
Hin6I	GCGC	1 cut(s)	2287
HinP1I	GCGC	1 cut(s)	2287
HindIII	AAGCTT	2 cut(s)	179, 1408
HpaII	CCGG	7 cut(s)	118, 710, 1986, 2290, 2323, 2347, 2590
HphI	GGTGA	8 cut(s)	107, 329, 758, 821, 847, 1913, 1981, 2438
Hpy166II	GTNNAC	5 cut(s)	1526, 1875, 2136, 2587, 2657
Hpy188I	TCNGA	9 cut(s)	193, 479, 588, 1327, 1425, 1747, 1825, 1934, 2439
Hpy188III	TCNNGA	6 cut(s)	175, 869, 1370, 1847, 2177, 2493
Hpy8I	GTNNAC	5 cut(s)	1526, 1875, 2136, 2587, 2657
Hpy99I	CGWCG	1 cut(s)	727
HpyAV	CCTTC	7 cut(s)	98, 314, 1863, 1903, 2154, 2458, 2474
HpyCH4III	ACNGT	7 cut(s)	100, 217, 580, 1126, 1808, 2062, 2552
HpyCH4IV	ACGT	3 cut(s)	22, 297, 722
HpySE526I	ACGT	3 cut(s)	22, 297, 722
Hsp92II	CATG	9 cut(s)	251, 283, 670, 1021, 1060, 1238, 1546, 1802, 2383
HspAI	GCGC	1 cut(s)	2287
LguI	GCTCTTC	1 cut(s)	917
LmnI	GCTCC	4 cut(s)	80, 501, 593, 1901
Lsp1109I	GCAGC	8 cut(s)	808, 1580, 1639, 1668, 1760, 2118, 2176, 2365
LweI	GCATC	6 cut(s)	33, 265, 398, 862, 2250, 2274
MabI	ACCWGGT	1 cut(s)	828
MaeI	CTAG	2 cut(s)	47, 441
MaeII	ACGT	3 cut(s)	22, 297, 722
MaeIII	GTNAC	5 cut(s)	211, 853, 1153, 1315, 1486
MfeI	CAATTG	1 cut(s)	2357
MflI	RGATCY	2 cut(s)	1255, 1988
MhlI	GDGCHC	5 cut(s)	598, 657, 1634, 1906, 1932
MlyI	GAGTC	3 cut(s)	1814, 1957, 2216
MmeI	TCCRAC	6 cut(s)	183, 286, 432, 1747, 2071, 2269
MseI	TTAA	6 cut(s)	183, 1389, 1457, 1608, 2069, 2217
MslI	CAYNNNNRTG	2 cut(s)	660, 1547
MspA1I	CMGCKG	1 cut(s)	1037
MspI	CCGG	7 cut(s)	118, 710, 1986, 2290, 2323, 2347, 2590
MspR9I	CCNGG	7 cut(s)	243, 497, 710, 753, 830, 1415, 1986
MunI	CAATTG	1 cut(s)	2357
MvaI	CCWGG	5 cut(s)	243, 497, 753, 830, 1415
MvnI	CGCG	1 cut(s)	2250
NciI	CCSGG	2 cut(s)	710, 1986
NdeI	CATATG	2 cut(s)	937, 1686
NlaIII	CATG	9 cut(s)	251, 283, 670, 1021, 1060, 1238, 1546, 1802, 2383
NlaIV	GGNNCC	6 cut(s)	571, 1374, 1903, 1983, 1990, 2017
NmeAIII	GCCGAG	2 cut(s)	715, 2217
NmuCI	GTSAC	3 cut(s)	211, 853, 1486
NspI	RCATGY	2 cut(s)	251, 2383
PaeI	GCATGC	1 cut(s)	251
PasI	CCCWGGG	1 cut(s)	496
PceI	AGGCCT	2 cut(s)	112, 2567
PciSI	GCTCTTC	1 cut(s)	917
PcsI	WCGNNNNNNNCGW	1 cut(s)	1864
PflMI	CCANNNNNTGG	1 cut(s)	1505
PfoI	TCCNGGA	1 cut(s)	1413
PinAI	ACCGGT	1 cut(s)	2346
PkrI	GCNGC	9 cut(s)	823, 1570, 1654, 1683, 1775, 2108, 2191, 2355, 2683
PleI	GAGTC	3 cut(s)	1814, 1957, 2215
PpsI	GAGTC	3 cut(s)	1814, 1957, 2215
PpuMI	RGGWCCY	2 cut(s)	569, 1372
PshBI	ATTAAT	1 cut(s)	1608
Psp124BI	GAGCTC	1 cut(s)	1932
Psp1406I	AACGTT	1 cut(s)	22
Psp5II	RGGWCCY	2 cut(s)	569, 1372
Psp6I	CCWGG	5 cut(s)	241, 495, 751, 828, 1413
PspFI	CCCAGC	1 cut(s)	1641
PspGI	CCWGG	5 cut(s)	241, 495, 751, 828, 1413
PspN4I	GGNNCC	6 cut(s)	571, 1374, 1903, 1983, 1990, 2017
PspPI	GGNCC	7 cut(s)	234, 569, 913, 1372, 1693, 2015, 2311
PspPPI	RGGWCCY	2 cut(s)	569, 1372
PstI	CTGCAG	1 cut(s)	568
PstNI	CAGNNNCTG	2 cut(s)	215, 1331
PsuI	RGATCY	2 cut(s)	1255, 1988
PvuII	CAGCTG	1 cut(s)	1037
RsaI	GTAC	3 cut(s)	170, 343, 1593
RsaNI	GTAC	3 cut(s)	169, 342, 1592
RseI	CAYNNNNRTG	2 cut(s)	660, 1547
SacI	GAGCTC	1 cut(s)	1932
SapI	GCTCTTC	1 cut(s)	917
SaqAI	TTAA	6 cut(s)	183, 1389, 1457, 1608, 2069, 2217
SatI	GCNGC	9 cut(s)	822, 1569, 1653, 1682, 1774, 2107, 2190, 2354, 2682
Sau96I	GGNCC	7 cut(s)	234, 569, 913, 1372, 1693, 2015, 2311
SchI	GAGTC	3 cut(s)	1814, 1957, 2216
ScrFI	CCNGG	7 cut(s)	243, 497, 710, 753, 830, 1415, 1986
SduI	GDGCHC	5 cut(s)	598, 657, 1634, 1906, 1932
SexAI	ACCWGGT	1 cut(s)	828
SfaNI	GCATC	6 cut(s)	33, 265, 398, 862, 2250, 2274
SfcI	CTRYAG	3 cut(s)	432, 564, 1710
SinI	GGWCC	4 cut(s)	234, 569, 1372, 2015
SmiMI	CAYNNNNRTG	2 cut(s)	660, 1547
SmlI	CTYRAG	2 cut(s)	917, 1613
SmoI	CTYRAG	2 cut(s)	917, 1613
SphI	GCATGC	1 cut(s)	251
SseBI	AGGCCT	2 cut(s)	112, 2567
SsiI	CCGC	6 cut(s)	94, 1046, 1100, 2326, 2660, 2679
SspI	AATATT	1 cut(s)	649
SspMI	CTAG	2 cut(s)	47, 441
SstI	GAGCTC	1 cut(s)	1932
StuI	AGGCCT	2 cut(s)	112, 2567
StyD4I	CCNGG	7 cut(s)	241, 495, 708, 751, 828, 1413, 1984
StyI	CCWWGG	1 cut(s)	805
TaaI	ACNGT	7 cut(s)	100, 217, 580, 1126, 1808, 2062, 2552
TaiI	ACGT	3 cut(s)	25, 300, 725
TaqI	TCGA	3 cut(s)	129, 523, 686
TaqII	GACCGA	1 cut(s)	149
TatI	WGTACW	1 cut(s)	168
Tru1I	TTAA	6 cut(s)	183, 1389, 1457, 1608, 2069, 2217
Tru9I	TTAA	6 cut(s)	183, 1389, 1457, 1608, 2069, 2217
TscAI	CASTG	6 cut(s)	216, 746, 1947, 1983, 2205, 2557
TseFI	GTSAC	3 cut(s)	211, 853, 1486
TseI	GCWGC	9 cut(s)	821, 1568, 1652, 1681, 1773, 2106, 2189, 2353, 2681
Tsp45I	GTSAC	3 cut(s)	211, 853, 1486
TspDTI	ATGAA	8 cut(s)	638, 1006, 1017, 1107, 1130, 1155, 1326, 2166
TspGWI	ACGGA	3 cut(s)	1914, 2296, 2542
TspRI	CASTG	6 cut(s)	216, 746, 1947, 1983, 2205, 2557
Van91I	CCANNNNNTGG	1 cut(s)	1505
VpaK11BI	GGWCC	4 cut(s)	234, 569, 1372, 2015
VspI	ATTAAT	1 cut(s)	1608
XagI	CCTNNNNNAGG	1 cut(s)	494
XapI	RAATTY	7 cut(s)	715, 1094, 1397, 1502, 1885, 2400, 2645
XceI	RCATGY	2 cut(s)	251, 2383
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2252
XmiI	GTMKAC	2 cut(s)	1874, 2586
XspI	CTAG	2 cut(s)	47, 441

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.