Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0002248.1

Orthogroup ID

OG0001810

Physical Location & Seq

Genomic Coordinates Reverse (-)

78668 .. 87034

Gene Structure 8367 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0002248.1_g000022.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2844 bp

atgggtgcccagttgcctgggagcaaagagccgcgcttcttgggcttgggccttttttgctgcatcagttccaattttgacttcgggtcagatatggatccgcatttgagaccagggtcgtaccctaattcggatcttggatccgaaacagctgctcatattgttctggtattggttatgaagcacttttcttggggagtgcttgtggtactagttgtggttatcgggggtagcttgcagactgtggtggagggacgccctcgccggattcttttggataccgacgtcgacaccgatgatttctttgctctcttgtacctcttgaagctcaacagatcagagtttcagttggaggcagtaacagttaatgcaaatgcgtggaccaattcggggcatgctgtgaaccatatatatgacctcctttacatgatgggacgtgatgatgttgctgttggagttggaggtgagggtggtatactagaagatggtacaattctcccaaatgttggtggatatcttccattaatcgaacaggggactacaacagcaggaggatgcagatacagacaagctattcctgtaggacctggaggtcgattagatatcgatactaactttggcatccgaaaagcttttctcccacaggggagcaggagatatagtccatttcgacaacctactgctcagcaagtgatgattgacaaaatatctgcaggtcccaaaataactgtgattgttataggagcacatacaaactttgccatattccttatgaataatccacacttgaagaagaatgttgagcatatttatgtgatggggggtggtgtgagatcaaagaacccaactggttgttgccccaaaaatgccacctcgacttgtgtgcctgcacagtgtggtgatcctggtaacttgttcactgactataccagcaatccttatgcagagttcaatatctatggagacccttttgctgcttaccaggttattcattcaggaattcctgtcacccttgttcctttagatgcaacaaacaccattccgattaatcaaaacttctatgaagcatttgagaagagtcagactacatatgaggcacaatattgcttcaagtccttgaaaatgcaacatgatacttggttcgacaaccaattcttcactagctattttatgtgggactcttttacatctggtgtagcggtctcaatcatgcaaaactcgcataatagcagtcacccggagaatgaatttgctgaaatggcctacatgaacataactgttattacttcgaatgaaccttatggggtctctgatggctccaatcctttctttgacggccttaaaactccgaaattcaacttatcgaaaaatggtgtgcatagtggtcatgtccaaactggtcttagagatccattctgcattgtgaagaatgggaaaggaaaatgcaaggatggatatacagcagaagtaacaggtccagaggcagtgacagtgcttgttgctacaaaagcaaaaccaaataaggatgttgaaagcccacttaacagagaattctttaaaagcttcttggaagttctaaacagccctcaacaaacagggaaattcaattttacaacacaatttcctttctacaaggaagtgacatataaaccagattttggaaatactaaactgggcaaacctgttgtgtttgacatggatatgagtgctggagactttctagctttgctttacctcctcaaagttcctgttgaagagattaatctcaaggcaatactagtgacacctactggttgggcaaatgctgcaacaatagatatcatatatgacttgctgcatatgatgggtcgtgacgacattccagttggtcgaggagatgtatttgctatgaaccaatctgacccatctttctctgcagttggagactgcaaaaatgttaaggctgtcccacatgggggtggtgggttactggattcagacactctctacggccttgctcgtgacttacctcgaagcccaagaaggtatacagcggaaaattctgtgaaatatggagccctacgggatacagataaccctgaactcaggcaaccactagcatcggaagtttgggattctgtggtgaaaacattggatccaggatctaaggttaccatattgaccaatggaccattgactactctagcaagcattattttgtcggaaaataacactagctctctaattcaggatgtgtatatagttggaggacatatcagccgcagtgaaaatgacaaaggaaatgtgttttcgattccttccagtgaatatgccgagttcaatatgtttcttgaccctttggctgcaaagactgtgtttgattcctcacttaacatcacactcgttcctcttggcatccagcagagagttggttattttccaaaaatattaaaaaggctgcgcagcacgaagaagacaacaccagaagctctgtttgcccggcgattgctgtcaaggctataccgtttgcaacaattgcaccatagctatcaccacatgggaactttctcaggggaactccttggtgcagttctcttggacggtgattctcatctgagccaaagcttcaaactcaaacacttcaaagtgtttgctgacgatattgaatccagagatggggaaattttgacttatcaaaaccaaggaaaattagtcaaagtattggacaaagtaaatcccagggcatattatgaacttttcgcagaacggctaagtgattcaaagcagtctgctgtattagcaagttttgaagagcaaaaaaaattgtggcagaaaccaccaaatcaaactgagcctgcagagtag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko03013 map03013

Pfam Domains

Protein Families

IU_nuc_hydro

Protein Analysis

947

Amino Acids

104.51

Weight (kDa)

6.12

Isoelectric Point (pI)

33.63

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001810)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G18860 AT5G18860 AT5G18870 AT5G18890
fragaria_vesca	FvH4_4g16830 FvH4_4g16830 FvH4_4g16850 FvH4_4g16850 FvH4_4g16850 FvH4_4g16850 FvH4_4g16850
malus_domestica	MD12G1227000.v1.1 MD13G1176200.v1.1 MD16G1178000.v1.1
prunus_persica	Prupe.1G145300_v2.0.a1 Prupe.1G145300_v2.0.a1 Prupe.6G332600_v2.0.a1 Prupe.6G332600_v2.0.a1
pyrus_communis	pycom12g21140 pycom12g21170 pycom13g15200 pycom16g14950
rosa_chinensis	RchiOBHm_Chr3g0453471 RchiOBHm_Chr4g0420411 RchiOBHm_Chr4g0420421
rosa_laevigata	RLG00000007765 RLG00000025511
rosa_multiflora	Rmu_sc0000510.1_g000010 Rmu_sc0002248.1_g000022
rosa_roxburghii	Rroxscaffold_5G00363050 Rroxscaffold_6G00430440
rosa_rugosa	Rorug02G0649300 Rorug04G0163700
rosa_samantha	Rh3AG052100 Rh3AG052300 Rh3BG053600 Rh3BG053700 Rh3CG052900 Rh3CG053100 Rh3DG053700 Rh3DG053900 Rh4AG225200 Rh4BG228000 Rh4CG239500 Rh4DG223700
rosa_wichuraiana	Rw3G004020 Rw4G019440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	591
AatII	GACGTC	1 cut(s)	288
Acc16I	TGCGCA	1 cut(s)	2441
Acc36I	ACCTGC	1 cut(s)	704
AccB1I	GGYRCC	1 cut(s)	5
AccB7I	CCANNNNNTGG	2 cut(s)	506, 1658
AccI	GTMKAC	3 cut(s)	288, 475, 2027
AccII	CGCG	1 cut(s)	34
AciI	CCGC	5 cut(s)	32, 101, 1199, 2033, 2260
AcsI	RAATTY	7 cut(s)	999, 1247, 1352, 1550, 1601, 2038, 2661
AcyI	GRCGYC	2 cut(s)	256, 285
AdeI	CACNNNGTG	1 cut(s)	896
AfaI	GTAC	4 cut(s)	122, 210, 317, 490
AfiI	CCNNNNNNNGG	7 cut(s)	130, 390, 506, 1658, 1954, 1955, 2655
AhdI	GACNNNNNGTC	1 cut(s)	85
AhlI	ACTAGT	2 cut(s)	211, 1777
AjiI	CACGTC	1 cut(s)	437
AjnI	CCWGG	7 cut(s)	16, 112, 586, 904, 981, 2137, 2717
AjuI	GAANNNNNNNTTGG	2 cut(s)	65, 97
Alw21I	GWGCWC	1 cut(s)	748
Alw26I	GTCTC	6 cut(s)	103, 957, 1207, 1312, 1707, 1917
AoxI	GGCC	4 cut(s)	49, 1260, 1336, 1990
ApeKI	GCWGC	8 cut(s)	60, 152, 974, 1805, 1834, 2342, 2437, 2442
ApoI	RAATTY	7 cut(s)	999, 1247, 1352, 1550, 1601, 2038, 2661
AseI	ATTAAT	3 cut(s)	524, 1047, 1761
AspLEI	GCGC	2 cut(s)	36, 2442
AspS9I	GGNCC	6 cut(s)	49, 381, 584, 716, 1475, 2168
AsuC2I	CCSGG	2 cut(s)	1238, 2479
AsuHPI	GGTGA	7 cut(s)	476, 911, 1000, 1226, 2134, 2522, 2594
AsuII	TTCGAA	1 cut(s)	1289
AvaII	GGWCC	5 cut(s)	381, 584, 716, 1475, 2168
BaeGI	GKGCMC	1 cut(s)	10
BaeI	ACNNNNGTAYC	2 cut(s)	270, 303
BamHI	GGATCC	3 cut(s)	97, 140, 2134
BanI	GGYRCC	1 cut(s)	5
BanII	GRGCYC	1 cut(s)	2059
BauI	CACGAG	1 cut(s)	1998
BbsI	GAAGAC	1 cut(s)	2459
Bbv12I	GWGCWC	1 cut(s)	748
BbvI	GCAGC	8 cut(s)	47, 139, 961, 1792, 1821, 2329, 2424, 2454
BccI	CCATC	8 cut(s)	424, 479, 811, 1307, 1445, 1837, 1912, 2648
BceAI	ACGGC	3 cut(s)	1351, 2005, 2762
BcgI	CGANNNNNNTGC	4 cut(s)	134, 168, 865, 899
BciT130I	CCWGG	7 cut(s)	18, 114, 588, 906, 983, 2139, 2719
BciVI	GTATCC	2 cut(s)	271, 2059
BcnI	CCSGG	2 cut(s)	1238, 2479
BcoDI	GTCTC	6 cut(s)	103, 957, 1207, 1312, 1707, 1917
BcuI	ACTAGT	2 cut(s)	211, 1777
BfaI	CTAG	8 cut(s)	212, 479, 1161, 1721, 1778, 2096, 2183, 2214
BfmI	CTRYAG	4 cut(s)	579, 711, 1914, 2835
BfuAI	ACCTGC	1 cut(s)	704
BfuI	GTATCC	2 cut(s)	271, 2059
BlpI	GCTNAGC	1 cut(s)	684
Bme1390I	CCNGG	9 cut(s)	18, 114, 588, 906, 983, 1238, 2139, 2479, 2719
Bme18I	GGWCC	5 cut(s)	381, 584, 716, 1475, 2168
BmeRI	GACNNNNNGTC	1 cut(s)	85
BmgBI	CACGTC	1 cut(s)	437
BmgT120I	GGNCC	6 cut(s)	49, 381, 584, 716, 1475, 2168
BmiI	GGNNCC	7 cut(s)	7, 99, 142, 718, 1318, 2056, 2136
BmrFI	CCNGG	9 cut(s)	18, 114, 588, 906, 983, 1238, 2139, 2479, 2719
BmrI	ACTGGG	2 cut(s)	4, 1682
BmsI	GCATC	6 cut(s)	72, 545, 630, 1015, 2108, 2403
BmuI	ACTGGG	2 cut(s)	4, 1682
BoxI	GACNNNNGTC	1 cut(s)	115
BpiI	GAAGAC	1 cut(s)	2459
BpmI	CTGGAG	2 cut(s)	609, 1731
Bpu1102I	GCTNAGC	1 cut(s)	684
Bpu14I	TTCGAA	1 cut(s)	1289
BpuEI	CTTGAG	1 cut(s)	1751
BpuMI	CCSGG	2 cut(s)	1238, 2479
Bsa29I	ATCGAT	1 cut(s)	606
BsaBI	GATNNNNATC	2 cut(s)	96, 2589
BsaHI	GRCGYC	2 cut(s)	256, 285
BsaI	GGTCTC	4 cut(s)	103, 957, 1207, 1312
BsaJI	CCNNGG	6 cut(s)	17, 113, 2560, 2680, 2717, 2718
BsaXI	ACNNNNNCTCC	4 cut(s)	189, 219, 646, 676
Bsc4I	CCNNNNNNNGG	7 cut(s)	130, 390, 506, 1658, 1954, 1955, 2655
Bse1I	ACTGG	8 cut(s)	10, 853, 1402, 1677, 1795, 1862, 1974, 2301
Bse8I	GATNNNNATC	2 cut(s)	96, 2589
BseBI	CCWGG	7 cut(s)	18, 114, 588, 906, 983, 2139, 2719
BseCI	ATCGAT	1 cut(s)	606
BseDI	CCNNGG	6 cut(s)	17, 113, 2560, 2680, 2717, 2718
BseGI	GGATG	6 cut(s)	560, 621, 1456, 1531, 2236, 2394
BseJI	GATNNNNATC	2 cut(s)	96, 2589
BseLI	CCNNNNNNNGG	7 cut(s)	130, 390, 506, 1658, 1954, 1955, 2655
BseMII	CTCAG	5 cut(s)	698, 2098, 2562, 2585, 2820
BseNI	ACTGG	8 cut(s)	10, 853, 1402, 1677, 1795, 1862, 1974, 2301
BseRI	GAGGAG	2 cut(s)	1727, 1887
BseSI	GKGCMC	1 cut(s)	10
BseXI	GCAGC	8 cut(s)	47, 139, 961, 1792, 1821, 2329, 2424, 2454
BsgI	GTGCAG	2 cut(s)	873, 2586
Bsh1236I	CGCG	1 cut(s)	34
BshFI	GGCC	4 cut(s)	51, 1262, 1338, 1992
BshNI	GGYRCC	1 cut(s)	5
BshVI	ATCGAT	1 cut(s)	606
BsiHKAI	GWGCWC	1 cut(s)	748
BsiSI	CCGG	3 cut(s)	265, 1238, 2479
BslFI	GGGAC	6 cut(s)	267, 447, 550, 702, 1190, 1931
BslI	CCNNNNNNNGG	7 cut(s)	130, 390, 506, 1658, 1954, 1955, 2655
BsmAI	GTCTC	6 cut(s)	103, 957, 1207, 1312, 1707, 1917
BsmFI	GGGAC	6 cut(s)	267, 447, 550, 702, 1190, 1931
BsnI	GGCC	4 cut(s)	51, 1262, 1338, 1992
Bso31I	GGTCTC	4 cut(s)	103, 957, 1207, 1312
Bsp119I	TTCGAA	1 cut(s)	1289
Bsp1286I	GDGCHC	3 cut(s)	10, 748, 2059
Bsp143I	GATC	9 cut(s)	97, 133, 140, 335, 833, 901, 1408, 2134, 2141
Bsp1720I	GCTNAGC	1 cut(s)	684
BspACI	CCGC	5 cut(s)	32, 101, 1199, 2033, 2260
BspANI	GGCC	4 cut(s)	51, 1262, 1338, 1992
BspCNI	CTCAG	5 cut(s)	697, 2097, 2561, 2586, 2821
BspDI	ATCGAT	1 cut(s)	606
BspFNI	CGCG	1 cut(s)	34
BspLI	GGNNCC	7 cut(s)	7, 99, 142, 718, 1318, 2056, 2136
BspMAI	CTGCAG	3 cut(s)	715, 1918, 2839
BspMI	ACCTGC	1 cut(s)	704
BspQI	GCTCTTC	1 cut(s)	2784
BspT104I	TTCGAA	1 cut(s)	1289
BspT107I	GGYRCC	1 cut(s)	5
BspTNI	GGTCTC	4 cut(s)	103, 957, 1207, 1312
BsrI	ACTGG	8 cut(s)	10, 853, 1402, 1677, 1795, 1862, 1974, 2301
BssECI	CCNNGG	6 cut(s)	17, 113, 2560, 2680, 2717, 2718
BssMI	GATC	9 cut(s)	97, 133, 140, 335, 833, 901, 1408, 2134, 2141
BssNAI	GTATAC	2 cut(s)	476, 2028
BssNI	GRCGYC	2 cut(s)	256, 285
BssSI	CACGAG	1 cut(s)	1998
BssT1I	CCWWGG	2 cut(s)	2560, 2680
Bst1107I	GTATAC	2 cut(s)	476, 2028
Bst2BI	CACGAG	1 cut(s)	1998
Bst2UI	CCWGG	7 cut(s)	18, 114, 588, 906, 983, 2139, 2719
Bst4CI	ACNGT	9 cut(s)	244, 364, 730, 894, 1279, 1492, 2353, 2504, 2582
Bst6I	CTCTTC	3 cut(s)	1070, 1749, 2784
BstACI	GRCGYC	2 cut(s)	256, 285
BstAPI	GCANNNNNTGC	2 cut(s)	1805, 2515
BstBI	TTCGAA	1 cut(s)	1289
BstC8I	GCNNGC	5 cut(s)	236, 396, 888, 2188, 2835
BstDEI	CTNAG	8 cut(s)	684, 1403, 2084, 2145, 2548, 2594, 2750, 2829
BstEII	GGTNACC	1 cut(s)	2149
BstF5I	GGATG	6 cut(s)	560, 621, 1456, 1531, 2236, 2394
BstFNI	CGCG	1 cut(s)	34
BstHHI	GCGC	2 cut(s)	36, 2442
BstKTI	GATC	9 cut(s)	100, 136, 143, 338, 836, 904, 1411, 2137, 2144
BstMAI	GTCTC	6 cut(s)	103, 957, 1207, 1312, 1707, 1917
BstMBI	GATC	9 cut(s)	97, 133, 140, 335, 833, 901, 1408, 2134, 2141
BstNI	CCWGG	7 cut(s)	18, 114, 588, 906, 983, 2139, 2719
BstNSI	RCATGY	1 cut(s)	398
BstPAI	GACNNNNGTC	1 cut(s)	115
BstPI	GGTNACC	1 cut(s)	2149
BstSCI	CCNGG	9 cut(s)	16, 112, 586, 904, 981, 1236, 2137, 2477, 2717
BstSFI	CTRYAG	4 cut(s)	579, 711, 1914, 2835
BstSLI	GKGCMC	1 cut(s)	10
BstUI	CGCG	1 cut(s)	34
BstV1I	GCAGC	8 cut(s)	47, 139, 961, 1792, 1821, 2329, 2424, 2454
BstV2I	GAAGAC	1 cut(s)	2459
BstX2I	RGATCY	6 cut(s)	97, 133, 140, 1408, 2134, 2141
BstXI	CCANNNNNNTGG	1 cut(s)	17
BstYI	RGATCY	6 cut(s)	97, 133, 140, 1408, 2134, 2141
BstZ17I	GTATAC	2 cut(s)	476, 2028
Bsu15I	ATCGAT	1 cut(s)	606
BsuI	GTATCC	2 cut(s)	271, 2059
BsuRI	GGCC	4 cut(s)	51, 1262, 1338, 1992
BsuTUI	ATCGAT	1 cut(s)	606
BtrI	CACGTC	1 cut(s)	437
BtsCI	GGATG	6 cut(s)	560, 621, 1456, 1531, 2236, 2394
BtsI	GCAGTG	2 cut(s)	1491, 2269
BtsIMutI	CAGTG	6 cut(s)	899, 918, 1491, 1497, 2269, 2308
BveI	ACCTGC	1 cut(s)	704
Cac8I	GCNNGC	5 cut(s)	236, 396, 888, 2188, 2835
CfoI	GCGC	2 cut(s)	36, 2442
Cfr13I	GGNCC	6 cut(s)	49, 381, 584, 716, 1475, 2168
ClaI	ATCGAT	1 cut(s)	606
CseI	GACGC	1 cut(s)	264
CsiI	ACCWGGT	1 cut(s)	981
Csp6I	GTAC	4 cut(s)	121, 209, 316, 489
CviAII	CATG	9 cut(s)	395, 427, 1130, 1210, 1267, 1388, 1696, 1952, 2536
CviQI	GTAC	4 cut(s)	121, 209, 316, 489
DdeI	CTNAG	8 cut(s)	684, 1403, 2084, 2145, 2548, 2594, 2750, 2829
DpnI	GATC	9 cut(s)	99, 135, 142, 337, 835, 903, 1410, 2136, 2143
DpnII	GATC	9 cut(s)	97, 133, 140, 335, 833, 901, 1408, 2134, 2141
DraI	TTTAAA	1 cut(s)	1558
DraIII	CACNNNGTG	1 cut(s)	896
DrdI	GACNNNNNNGTC	1 cut(s)	591
DriI	GACNNNNNGTC	1 cut(s)	85
DseDI	GACNNNNNNGTC	1 cut(s)	591
Eam1104I	CTCTTC	3 cut(s)	1070, 1749, 2784
Eam1105I	GACNNNNNGTC	1 cut(s)	85
EarI	CTCTTC	3 cut(s)	1070, 1749, 2784
Eco130I	CCWWGG	2 cut(s)	2560, 2680
Eco24I	GRGCYC	1 cut(s)	2059
Eco31I	GGTCTC	4 cut(s)	103, 957, 1207, 1312
Eco32I	GATATC	3 cut(s)	515, 604, 1819
Eco47I	GGWCC	5 cut(s)	381, 584, 716, 1475, 2168
Eco91I	GGTNACC	1 cut(s)	2149
EcoO109I	RGGNCCY	2 cut(s)	584, 716
EcoO65I	GGTNACC	1 cut(s)	2149
EcoRI	GAATTC	2 cut(s)	999, 1550
EcoRII	CCWGG	7 cut(s)	16, 112, 586, 904, 981, 2137, 2717
EcoRV	GATATC	3 cut(s)	515, 604, 1819
EcoT14I	CCWWGG	2 cut(s)	2560, 2680
EcoT38I	GRGCYC	1 cut(s)	2059
ErhI	CCWWGG	2 cut(s)	2560, 2680
FaeI	CATG	9 cut(s)	398, 430, 1133, 1213, 1270, 1391, 1699, 1955, 2539
FaqI	GGGAC	6 cut(s)	267, 447, 550, 702, 1190, 1931
FatI	CATG	9 cut(s)	394, 426, 1129, 1209, 1266, 1387, 1695, 1951, 2535
FauNDI	CATATG	2 cut(s)	1090, 1839
FblI	GTMKAC	3 cut(s)	288, 475, 2027
FokI	GGATG	6 cut(s)	567, 608, 1463, 1538, 2243, 2381
FriOI	GRGCYC	1 cut(s)	2059
FspBI	CTAG	8 cut(s)	212, 479, 1161, 1721, 1778, 2096, 2183, 2214
FspI	TGCGCA	1 cut(s)	2441
GlaI	GCGC	2 cut(s)	35, 2441
GsuI	CTGGAG	2 cut(s)	609, 1731
HaeIII	GGCC	4 cut(s)	51, 1262, 1338, 1992
HapII	CCGG	3 cut(s)	265, 1238, 2479
HgaI	GACGC	1 cut(s)	264
HhaI	GCGC	2 cut(s)	36, 2442
Hin1I	GRCGYC	2 cut(s)	256, 285
Hin1II	CATG	9 cut(s)	398, 430, 1133, 1213, 1270, 1391, 1699, 1955, 2539
Hin6I	GCGC	2 cut(s)	34, 2440
HinP1I	GCGC	2 cut(s)	34, 2440
HincII	GTYRAC	1 cut(s)	289
HindII	GTYRAC	1 cut(s)	289
HindIII	AAGCTT	3 cut(s)	630, 1561, 2602
HpaII	CCGG	3 cut(s)	265, 1238, 2479
HphI	GGTGA	7 cut(s)	476, 911, 1000, 1226, 2134, 2522, 2594
Hpy166II	GTNNAC	6 cut(s)	289, 381, 403, 476, 918, 2028
Hpy188III	TCNNGA	8 cut(s)	322, 996, 1478, 1850, 2000, 2228, 2330, 2649
Hpy8I	GTNNAC	6 cut(s)	289, 381, 403, 476, 918, 2028
Hpy99I	CGWCG	2 cut(s)	287, 290
HpyAV	CCTTC	2 cut(s)	2016, 2307
HpyCH4III	ACNGT	9 cut(s)	244, 364, 730, 894, 1279, 1492, 2353, 2504, 2582
HpyCH4IV	ACGT	2 cut(s)	285, 436
HpyF3I	CTNAG	8 cut(s)	684, 1403, 2084, 2145, 2548, 2594, 2750, 2829
HpySE526I	ACGT	2 cut(s)	285, 436
Hsp92I	GRCGYC	2 cut(s)	256, 285
Hsp92II	CATG	9 cut(s)	398, 430, 1133, 1213, 1270, 1391, 1699, 1955, 2539
HspAI	GCGC	2 cut(s)	34, 2440
Kzo9I	GATC	9 cut(s)	97, 133, 140, 335, 833, 901, 1408, 2134, 2141
LguI	GCTCTTC	1 cut(s)	2784
LmnI	GCTCC	5 cut(s)	21, 648, 743, 1322, 2054
Lsp1109I	GCAGC	8 cut(s)	47, 139, 961, 1792, 1821, 2329, 2424, 2454
LweI	GCATC	6 cut(s)	72, 545, 630, 1015, 2108, 2403
MabI	ACCWGGT	1 cut(s)	981
MaeI	CTAG	8 cut(s)	212, 479, 1161, 1721, 1778, 2096, 2183, 2214
MaeII	ACGT	2 cut(s)	285, 436
MalI	GATC	9 cut(s)	99, 135, 142, 337, 835, 903, 1410, 2136, 2143
MboI	GATC	9 cut(s)	97, 133, 140, 335, 833, 901, 1408, 2134, 2141
MfeI	CAATTG	1 cut(s)	2513
MflI	RGATCY	6 cut(s)	97, 133, 140, 1408, 2134, 2141
MhlI	GDGCHC	3 cut(s)	10, 748, 2059
MlyI	GAGTC	2 cut(s)	1087, 1172
MmeI	TCCRAC	6 cut(s)	330, 433, 439, 1900, 2181, 2224
MslI	CAYNNNNRTG	4 cut(s)	411, 810, 1700, 1956
MspA1I	CMGCKG	2 cut(s)	152, 2033
MspI	CCGG	3 cut(s)	265, 1238, 2479
MspR9I	CCNGG	9 cut(s)	18, 114, 588, 906, 983, 1238, 2139, 2479, 2719
MunI	CAATTG	1 cut(s)	2513
MvaI	CCWGG	7 cut(s)	18, 114, 588, 906, 983, 2139, 2719
MvnI	CGCG	1 cut(s)	34
NciI	CCSGG	2 cut(s)	1238, 2479
NdeI	CATATG	2 cut(s)	1090, 1839
NdeII	GATC	9 cut(s)	97, 133, 140, 335, 833, 901, 1408, 2134, 2141
NlaIII	CATG	9 cut(s)	398, 430, 1133, 1213, 1270, 1391, 1699, 1955, 2539
NlaIV	GGNNCC	7 cut(s)	7, 99, 142, 718, 1318, 2056, 2136
NmeAIII	GCCGAG	1 cut(s)	2338
NmuCI	GTSAC	7 cut(s)	1006, 1232, 1486, 1639, 1780, 1850, 2000
NsbI	TGCGCA	1 cut(s)	2441
NspI	RCATGY	1 cut(s)	398
NspV	TTCGAA	1 cut(s)	1289
PaeI	GCATGC	1 cut(s)	398
PasI	CCCWGGG	1 cut(s)	2718
PciSI	GCTCTTC	1 cut(s)	2784
PcsI	WCGNNNNNNNCGW	1 cut(s)	291
PfeI	GAWTC	8 cut(s)	268, 1973, 2114, 2293, 2360, 2585, 2645, 2756
PflMI	CCANNNNNTGG	2 cut(s)	506, 1658
PfoI	TCCNGGA	1 cut(s)	2137
PleI	GAGTC	2 cut(s)	1086, 1172
PpsI	GAGTC	2 cut(s)	1086, 1172
PpuMI	RGGWCCY	2 cut(s)	584, 716
PshAI	GACNNNNGTC	1 cut(s)	115
PshBI	ATTAAT	3 cut(s)	524, 1047, 1761
Psp5II	RGGWCCY	2 cut(s)	584, 716
Psp6I	CCWGG	7 cut(s)	16, 112, 586, 904, 981, 2137, 2717
PspEI	GGTNACC	1 cut(s)	2149
PspGI	CCWGG	7 cut(s)	16, 112, 586, 904, 981, 2137, 2717
PspN4I	GGNNCC	7 cut(s)	7, 99, 142, 718, 1318, 2056, 2136
PspPI	GGNCC	6 cut(s)	49, 381, 584, 716, 1475, 2168
PspPPI	RGGWCCY	2 cut(s)	584, 716
PstI	CTGCAG	3 cut(s)	715, 1918, 2839
PsuI	RGATCY	6 cut(s)	97, 133, 140, 1408, 2134, 2141
PvuII	CAGCTG	1 cut(s)	152
RsaI	GTAC	4 cut(s)	122, 210, 317, 490
RsaNI	GTAC	4 cut(s)	121, 209, 316, 489
RseI	CAYNNNNRTG	4 cut(s)	411, 810, 1700, 1956
SalI	GTCGAC	1 cut(s)	287
SapI	GCTCTTC	1 cut(s)	2784
Sau3AI	GATC	9 cut(s)	97, 133, 140, 335, 833, 901, 1408, 2134, 2141
Sau96I	GGNCC	6 cut(s)	49, 381, 584, 716, 1475, 2168
SchI	GAGTC	2 cut(s)	1087, 1172
ScrFI	CCNGG	9 cut(s)	18, 114, 588, 906, 983, 1238, 2139, 2479, 2719
SduI	GDGCHC	3 cut(s)	10, 748, 2059
SexAI	ACCWGGT	1 cut(s)	981
SfaNI	GCATC	6 cut(s)	72, 545, 630, 1015, 2108, 2403
SfcI	CTRYAG	4 cut(s)	579, 711, 1914, 2835
SfuI	TTCGAA	1 cut(s)	1289
SinI	GGWCC	5 cut(s)	381, 584, 716, 1475, 2168
SmiMI	CAYNNNNRTG	4 cut(s)	411, 810, 1700, 1956
SmlI	CTYRAG	1 cut(s)	1766
SmoI	CTYRAG	1 cut(s)	1766
SpeI	ACTAGT	2 cut(s)	211, 1777
SphI	GCATGC	1 cut(s)	398
SsiI	CCGC	5 cut(s)	32, 101, 1199, 2033, 2260
SspI	AATATT	2 cut(s)	1103, 2427
SspMI	CTAG	8 cut(s)	212, 479, 1161, 1721, 1778, 2096, 2183, 2214
StyD4I	CCNGG	9 cut(s)	16, 112, 586, 904, 981, 1236, 2137, 2477, 2717
StyI	CCWWGG	2 cut(s)	2560, 2680
TaaI	ACNGT	9 cut(s)	244, 364, 730, 894, 1279, 1492, 2353, 2504, 2582
TaiI	ACGT	2 cut(s)	288, 439
TauI	GCSGC	2 cut(s)	34, 2262
TfiI	GAWTC	8 cut(s)	268, 1973, 2114, 2293, 2360, 2585, 2645, 2756
TscAI	CASTG	6 cut(s)	899, 925, 1491, 1497, 2269, 2308
TseFI	GTSAC	7 cut(s)	1006, 1232, 1486, 1639, 1780, 1850, 2000
TseI	GCWGC	8 cut(s)	60, 152, 974, 1805, 1834, 2342, 2437, 2442
Tsp45I	GTSAC	7 cut(s)	1006, 1232, 1486, 1639, 1780, 1850, 2000
TspDTI	ATGAA	9 cut(s)	194, 788, 980, 1077, 1260, 1283, 1308, 1904, 2745
TspRI	CASTG	6 cut(s)	899, 925, 1491, 1497, 2269, 2308
Van91I	CCANNNNNTGG	2 cut(s)	506, 1658
VpaK11BI	GGWCC	5 cut(s)	381, 584, 716, 1475, 2168
VspI	ATTAAT	3 cut(s)	524, 1047, 1761
XapI	RAATTY	7 cut(s)	999, 1247, 1352, 1550, 1601, 2038, 2661
XceI	RCATGY	1 cut(s)	398
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2405
XmiI	GTMKAC	3 cut(s)	288, 475, 2027
XspI	CTAG	8 cut(s)	212, 479, 1161, 1721, 1778, 2096, 2183, 2214
ZraI	GACGTC	1 cut(s)	286

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.