Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr16

Orthogroup ID

OG0001810

Physical Location & Seq

Genomic Coordinates Forward (+)

15205059 .. 15211504

Gene Structure 6446 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD16G1178000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2367 bp

ATGATGGGACGTGATGACGTGAGAGTTGGAGTGGGTGGTGAAGGTGGGATCAAAGAAGATGGTACGATTTTGCCAAATGTTGGAGGATGCAGATATAGACAAGCCATTCCTGTAGGTGCTGGAGGTCGATTGGATATTGATTCTAATTTTGGCCTCAGAAAATCATTTCTCCCCCAGGGCAGCAGGAGATATACTCCCTTTCGACAACCTACTGCTCAGCAAGTGATGATTGACAAAATATCTGCAGGTCCCATTACTGTATTTCTGATAGGAGCACACACAAATTTTGCCCTTTTCCTCATGAGCAATCCACACCTAAAGAAGAATGTTGAGCACATTTATGTCATGGGTGGTGGTGTGAGATCGAAAAACCCTACTGGTTGTTGCCCGGAAAATTCCACGTCATGTGTTCCTCGGCAGTGTGGTGATCCTGGCAATGTCTTCACAGACTACACTAGTAATCCTTATGCAGAGTTCAATTTCCTTGGTGATCCCTTTGCTGCGTACCAGGTTATACACTCTGGGATTCCAGTCACCCTTGTTCCTCTGGATGCAACAAACACCATTCCCATTAGTCAAAACTTCTTTGATGCCTTTGAGAAGAGCCAGAACACATATGAGGCACAATATATCTTCCAGTCCTTGAAAATGGCTCGTGATACTTGGTTTGATGATCAATTCTACACGAGCTATTTCATGTGGGATTCATTCACAGCTGGTGTGGCGGTATCAATCATGCGAAACAACTCGAATAATCCTAATGGAGAAAATGAGTTTGCGGAAATGGAGTATATGAATATAACTGTGATTACTTCAAATGAACCTTATGGGGTAACTGATGGCTCTAATCCTTTCTTTGATGGCCTCAAAGTTCCAAAGTTCAACTTAGACAAAAATGGTGTGCATAGTGGTCATGTTCAAAAGGGACTAAGAGATCCATTTTGCATTGGGGAGAATGGCAAAGGGAAATGCAAGGATGGTTATACAGAAGAAGTAACAGGATCAGAGGCAGTGTCTGTGCTTGTTGCTACAAAAGCCAAACCAAATCAGGACCCTCAAAGCCCACTTGACAGAGAATTCTTCATAAGTTTCTTGGATGTTCTGAACAACCCTCAACAAAAAGGGAGATTCAATTTAACAACCCAATTTCCATTTTACAAGGAAGTTACATACAAACCAGAATTTGGAAACAGAAAACTTGGAAAACCTGTTGTCTTTGACATGGATATGAGTGCTGGAGACTTTGCAGCTCTCTTCTACCTCCTCAAAGTACCTATTGAAGTGATTAATCTCAAGGCAATAATAGTAAGCCCAACAGGATGGGCAAATGCTGCAACAATAGATGTGATTTATGACTTGCTGCATATGATGGGCCGTGATGACATCCCAGTAGGTCTTGGAGATGTATTTGCTACAAACCAGTCTGATTCAATCTTCTCTGCTGTTGGAGACTGCAAATACCTGCAGGCCATCCCTCATGGCAATGGTGGATTGCTGGACTCAGACACTCTCTACGGCCTTGCTCGCGATTTGCCACGAAGCCCACGAAGGTATACAGCAGAAAATTCTTTAGAATTTGGAGCCCCTCGGGATACAGATCAACCTGAACTCAGGCAACCACTGGCATTGGAGGTTTGGAAGGCTGTGGTGAAAACACTGGATCCAGGATCCAAGATTACCGTACTGACCAATGGACCCTTGACTAATTTAGCAAAGATCATTTCATCGGAAAAGAATACCACCTCTCTAATGCAGGATGTATATATTGTTGGAGGGCATCTCAGCAGCAATGACAGGGACAAAGGAAATGTGTTTACAATTCCTTCCAATGAATATGCAGAGTTCAACATATTTCTTGACCCTTTGGCTGCAAAAACAGTCTTTGAGTCCTCACTTAACATCACACTCATTCCCCTCGGCATCCAGCGCAAAGTTAGTTCGTTCTCGAAAATCTTAGAAAGGATGCGCTGGAAGAAGAAGACACCTGAGGCCAATTTTGCCCGGCGTTTGCTGTCAAGGCTCTACCGTTTGCAGCAATTGCACCATAGATATCATCACATGCAAACTTTTTTGGGGGAAATTCTTGGAGCAGTCCTCATAGCTGGTGATTCCCATCTGAATGAAACCTTCCAAGTGGAGCCCATCAAAGTTTATGCTGAAGGTTCTGAATCCAGTGATGGACAGCTTATGATCGATGAAAATCAACAGAAACTGGTCAGACTATTGGACAGTGTAGATCCTGAGGCTTATTACGATCTTTTTGCAGACCGGCTTAGCGATTCAAACCAGTCTGCTGTATTAGCTAGTTTCGAAGAGCAAGTAAACTTCTGGCGGAAGCCTCCGAATCAGTCCGGCACTGCTCCGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko03013 map03013

Pfam Domains

Protein Families

IU_nuc_hydro

Protein Analysis

789

Amino Acids

87.55

Weight (kDa)

5.59

Isoelectric Point (pI)

32.76

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
IU_nuc_hydro	PF01156	36 - 276	2e-27	Inosine-uridine preferring nucleoside hydrolase
IU_nuc_hydro	PF01156	404 - 751	1.3e-36	Inosine-uridine preferring nucleoside hydrolase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001810)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G18860 AT5G18860 AT5G18870 AT5G18890
fragaria_vesca	FvH4_4g16830 FvH4_4g16830 FvH4_4g16850 FvH4_4g16850 FvH4_4g16850 FvH4_4g16850 FvH4_4g16850
malus_domestica	MD12G1227000.v1.1 MD13G1176200.v1.1 MD16G1178000.v1.1
prunus_persica	Prupe.1G145300_v2.0.a1 Prupe.1G145300_v2.0.a1 Prupe.6G332600_v2.0.a1 Prupe.6G332600_v2.0.a1
pyrus_communis	pycom12g21140 pycom12g21170 pycom13g15200 pycom16g14950
rosa_chinensis	RchiOBHm_Chr3g0453471 RchiOBHm_Chr4g0420411 RchiOBHm_Chr4g0420421
rosa_laevigata	RLG00000007765 RLG00000025511
rosa_multiflora	Rmu_sc0000510.1_g000010 Rmu_sc0002248.1_g000022
rosa_roxburghii	Rroxscaffold_5G00363050 Rroxscaffold_6G00430440
rosa_rugosa	Rorug02G0649300 Rorug04G0163700
rosa_samantha	Rh3AG052100 Rh3AG052300 Rh3BG053600 Rh3BG053700 Rh3CG052900 Rh3CG053100 Rh3DG053700 Rh3DG053900 Rh4AG225200 Rh4BG228000 Rh4CG239500 Rh4DG223700
rosa_wichuraiana	Rw3G004020 Rw4G019440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	236, 1470
AccB7I	CCANNNNNTGG	2 cut(s)	80, 1184
AccI	GTMKAC	1 cut(s)	1553
AccII	CGCG	1 cut(s)	1527
AciI	CCGC	3 cut(s)	725, 779, 2332
AcsI	RAATTY	7 cut(s)	283, 394, 1076, 1181, 1564, 1574, 2079
AcuI	CTGAAG	1 cut(s)	2178
AfaI	GTAC	4 cut(s)	64, 506, 1272, 1683
AfiI	CCNNNNNNNGG	2 cut(s)	80, 1184
AhlI	ACTAGT	1 cut(s)	455
AjiI	CACGTC	3 cut(s)	11, 19, 402
AjnI	CCWGG	4 cut(s)	174, 430, 507, 1663
AluBI	AGCT	6 cut(s)	690, 716, 1250, 2102, 2185, 2303
AluI	AGCT	6 cut(s)	690, 716, 1250, 2102, 2185, 2303
Alw21I	GWGCWC	2 cut(s)	277, 336
Alw26I	GTCTC	2 cut(s)	1233, 1443
AlwNI	CAGNNNCTG	2 cut(s)	1016, 2212
Ama87I	CYCGRG	1 cut(s)	1587
AoxI	GGCC	6 cut(s)	151, 862, 1372, 1467, 1516, 1989
ApeKI	GCWGC	8 cut(s)	180, 500, 1247, 1331, 1360, 1785, 1868, 2032
ApoI	RAATTY	7 cut(s)	283, 394, 1076, 1181, 1564, 1574, 2079
AseI	ATTAAT	1 cut(s)	1287
AspLEI	GCGC	2 cut(s)	1929, 1968
AspS9I	GGNCC	4 cut(s)	248, 1051, 1372, 1694
AsuC2I	CCSGG	2 cut(s)	389, 2002
AsuHPI	GGTGA	6 cut(s)	50, 437, 500, 526, 1660, 2117
AsuII	TTCGAA	1 cut(s)	2310
AvaI	CYCGRG	1 cut(s)	1587
AvaII	GGWCC	3 cut(s)	248, 1051, 1694
AxyI	CCTNAGG	2 cut(s)	1986, 2241
BamHI	GGATCC	2 cut(s)	1660, 1667
BanII	GRGCYC	2 cut(s)	1585, 2142
BauI	CACGAG	2 cut(s)	654, 685
BbsI	GAAGAC	2 cut(s)	433, 1985
Bbv12I	GWGCWC	2 cut(s)	277, 336
BbvI	GCAGC	8 cut(s)	192, 487, 1259, 1318, 1347, 1797, 1855, 2044
BceAI	ACGGC	2 cut(s)	1359, 1531
BcgI	CGANNNNNNTGC	2 cut(s)	2243, 2277
BciT130I	CCWGG	4 cut(s)	176, 432, 509, 1665
BciVI	GTATCC	1 cut(s)	1585
BclI	TGATCA	1 cut(s)	673
BcnI	CCSGG	2 cut(s)	389, 2002
BcoDI	GTCTC	2 cut(s)	1233, 1443
BcuI	ACTAGT	1 cut(s)	455
BfaI	CTAG	2 cut(s)	456, 2304
BfmI	CTRYAG	3 cut(s)	111, 243, 1463
BfuAI	ACCTGC	2 cut(s)	236, 1470
BfuI	GTATCC	1 cut(s)	1585
BisI	GCNGC	8 cut(s)	181, 501, 1248, 1332, 1361, 1786, 1869, 2033
BlpI	GCTNAGC	2 cut(s)	216, 2273
BlsI	GCNGC	8 cut(s)	182, 502, 1249, 1333, 1362, 1787, 1870, 2034
Bme1390I	CCNGG	6 cut(s)	176, 389, 432, 509, 1665, 2002
Bme18I	GGWCC	3 cut(s)	248, 1051, 1694
BmeT110I	CYCGRG	1 cut(s)	1587
BmgBI	CACGTC	3 cut(s)	11, 19, 402
BmgT120I	GGNCC	4 cut(s)	248, 1051, 1372, 1694
BmiI	GGNNCC	7 cut(s)	250, 1053, 1582, 1662, 1669, 1696, 2139
BmrFI	CCNGG	6 cut(s)	176, 389, 432, 509, 1665, 2002
BmrI	ACTGGG	1 cut(s)	1382
BmsI	GCATC	6 cut(s)	77, 541, 580, 1786, 1929, 1953
BmuI	ACTGGG	1 cut(s)	1382
BpiI	GAAGAC	2 cut(s)	433, 1985
BplI	GAGNNNNNCTC	6 cut(s)	178, 210, 1764, 1796, 2079, 2111
BpmI	CTGGAG	2 cut(s)	141, 1257
Bpu1102I	GCTNAGC	2 cut(s)	216, 2273
Bpu14I	TTCGAA	1 cut(s)	2310
BpuEI	CTTGAG	1 cut(s)	1277
BpuMI	CCSGG	2 cut(s)	389, 2002
Bsa29I	ATCGAT	1 cut(s)	2193
BsaBI	GATNNNNATC	3 cut(s)	1596, 2112, 2199
BsaJI	CCNNGG	6 cut(s)	174, 175, 413, 484, 1586, 1915
Bsc4I	CCNNNNNNNGG	2 cut(s)	80, 1184
Bse118I	RCCGGY	1 cut(s)	2268
Bse21I	CCTNAGG	2 cut(s)	1986, 2241
Bse3DI	GCAATG	3 cut(s)	442, 1489, 1795
Bse8I	GATNNNNATC	3 cut(s)	1596, 2112, 2199
BseBI	CCWGG	4 cut(s)	176, 432, 509, 1665
BseCI	ATCGAT	1 cut(s)	2193
BseDI	CCNNGG	6 cut(s)	174, 175, 413, 484, 1586, 1915
BseJI	GATNNNNATC	3 cut(s)	1596, 2112, 2199
BseLI	CCNNNNNNNGG	2 cut(s)	80, 1184
BseMI	GCAATG	3 cut(s)	442, 1489, 1795
BseMII	CTCAG	7 cut(s)	169, 230, 1515, 1624, 1795, 1977, 2232
BseRI	GAGGAG	1 cut(s)	1253
BseXI	GCAGC	8 cut(s)	192, 487, 1259, 1318, 1347, 1797, 1855, 2044
Bsh1236I	CGCG	1 cut(s)	1527
BshFI	GGCC	6 cut(s)	153, 864, 1374, 1469, 1518, 1991
BshVI	ATCGAT	1 cut(s)	2193
BsiHKAI	GWGCWC	2 cut(s)	277, 336
BsiHKCI	CYCGRG	1 cut(s)	1587
BsiSI	CCGG	4 cut(s)	389, 2002, 2269, 2352
BslFI	GGGAC	4 cut(s)	21, 234, 939, 1811
BslI	CCNNNNNNNGG	2 cut(s)	80, 1184
BsmAI	GTCTC	2 cut(s)	1233, 1443
BsmFI	GGGAC	4 cut(s)	21, 234, 939, 1811
BsnI	GGCC	6 cut(s)	153, 864, 1374, 1469, 1518, 1991
BsoBI	CYCGRG	1 cut(s)	1587
Bsp119I	TTCGAA	1 cut(s)	2310
Bsp1286I	GDGCHC	4 cut(s)	277, 336, 1585, 2142
Bsp1720I	GCTNAGC	2 cut(s)	216, 2273
Bsp68I	TCGCGA	1 cut(s)	1527
BspACI	CCGC	3 cut(s)	725, 779, 2332
BspANI	GGCC	6 cut(s)	153, 864, 1374, 1469, 1518, 1991
BspCNI	CTCAG	7 cut(s)	168, 229, 1514, 1623, 1794, 1978, 2233
BspDI	ATCGAT	1 cut(s)	2193
BspFNI	CGCG	1 cut(s)	1527
BspHI	TCATGA	1 cut(s)	300
BspLI	GGNNCC	7 cut(s)	250, 1053, 1582, 1662, 1669, 1696, 2139
BspMAI	CTGCAG	2 cut(s)	247, 1467
BspMI	ACCTGC	2 cut(s)	236, 1470
BspQI	GCTCTTC	2 cut(s)	596, 2307
BspT104I	TTCGAA	1 cut(s)	2310
BsrDI	GCAATG	3 cut(s)	442, 1489, 1795
BsrFI	RCCGGY	1 cut(s)	2268
BssAI	RCCGGY	1 cut(s)	2268
BssECI	CCNNGG	6 cut(s)	174, 175, 413, 484, 1586, 1915
BssNAI	GTATAC	1 cut(s)	1554
BssSI	CACGAG	2 cut(s)	654, 685
BssT1I	CCWWGG	1 cut(s)	484
Bst1107I	GTATAC	1 cut(s)	1554
Bst2BI	CACGAG	2 cut(s)	654, 685
Bst2UI	CCWGG	4 cut(s)	176, 432, 509, 1665
Bst4CI	ACNGT	6 cut(s)	259, 805, 1681, 1879, 2027, 2231
Bst6I	CTCTTC	3 cut(s)	596, 1259, 2307
BstAPI	GCANNNNNTGC	2 cut(s)	1331, 2038
BstBI	TTCGAA	1 cut(s)	2310
BstC8I	GCNNGC	2 cut(s)	1467, 1525
BstFNI	CGCG	1 cut(s)	1527
BstHHI	GCGC	2 cut(s)	1929, 1968
BstMAI	GTCTC	2 cut(s)	1233, 1443
BstMWI	GCNNNNNNNGC	9 cut(s)	722, 1034, 1331, 1524, 1926, 1997, 2017, 2038, 2300
BstNI	CCWGG	4 cut(s)	176, 432, 509, 1665
BstNSI	RCATGY	1 cut(s)	2062
BstSCI	CCNGG	6 cut(s)	174, 387, 430, 507, 1663, 2000
BstSFI	CTRYAG	3 cut(s)	111, 243, 1463
BstUI	CGCG	1 cut(s)	1527
BstV1I	GCAGC	8 cut(s)	192, 487, 1259, 1318, 1347, 1797, 1855, 2044
BstV2I	GAAGAC	2 cut(s)	433, 1985
BstX2I	RGATCY	4 cut(s)	934, 1660, 1667, 2236
BstXI	CCANNNNNNTGG	1 cut(s)	1320
BstYI	RGATCY	4 cut(s)	934, 1660, 1667, 2236
BstZ17I	GTATAC	1 cut(s)	1554
Bsu15I	ATCGAT	1 cut(s)	2193
Bsu36I	CCTNAGG	2 cut(s)	1986, 2241
BsuI	GTATCC	1 cut(s)	1585
BsuRI	GGCC	6 cut(s)	153, 864, 1374, 1469, 1518, 1991
BsuTUI	ATCGAT	1 cut(s)	2193
BtrI	CACGTC	3 cut(s)	11, 19, 402
BtsI	GCAGTG	3 cut(s)	425, 1017, 2355
BtsIMutI	CAGTG	7 cut(s)	425, 1017, 1619, 1655, 2179, 2236, 2355
BtuMI	TCGCGA	1 cut(s)	1527
BveI	ACCTGC	2 cut(s)	236, 1470
Cac8I	GCNNGC	2 cut(s)	1467, 1525
CaiI	CAGNNNCTG	2 cut(s)	1016, 2212
CciI	TCATGA	1 cut(s)	300
CfoI	GCGC	2 cut(s)	1929, 1968
Cfr10I	RCCGGY	1 cut(s)	2268
Cfr13I	GGNCC	4 cut(s)	248, 1051, 1372, 1694
ClaI	ATCGAT	1 cut(s)	2193
CsiI	ACCWGGT	1 cut(s)	507
Csp6I	GTAC	4 cut(s)	63, 505, 1271, 1682
CspCI	CAANNNNNGTGG	2 cut(s)	1608, 1643
CviAII	CATG	9 cut(s)	301, 346, 405, 697, 736, 914, 1222, 1478, 2059
CviQI	GTAC	4 cut(s)	63, 505, 1271, 1682
Eam1104I	CTCTTC	3 cut(s)	596, 1259, 2307
EarI	CTCTTC	3 cut(s)	596, 1259, 2307
EciI	GGCGGA	1 cut(s)	2347
Eco130I	CCWWGG	1 cut(s)	484
Eco24I	GRGCYC	2 cut(s)	1585, 2142
Eco32I	GATATC	1 cut(s)	2051
Eco47I	GGWCC	3 cut(s)	248, 1051, 1694
Eco57I	CTGAAG	1 cut(s)	2178
Eco81I	CCTNAGG	2 cut(s)	1986, 2241
Eco88I	CYCGRG	1 cut(s)	1587
EcoO109I	RGGNCCY	2 cut(s)	248, 1051
EcoRI	GAATTC	1 cut(s)	1076
EcoRII	CCWGG	4 cut(s)	174, 430, 507, 1663
EcoRV	GATATC	1 cut(s)	2051
EcoT14I	CCWWGG	1 cut(s)	484
EcoT38I	GRGCYC	2 cut(s)	1585, 2142
ErhI	CCWWGG	1 cut(s)	484
FaeI	CATG	9 cut(s)	304, 349, 408, 700, 739, 917, 1225, 1481, 2062
FalI	AAGNNNNNCTT	2 cut(s)	869, 901
FaqI	GGGAC	4 cut(s)	21, 234, 939, 1811
FatI	CATG	9 cut(s)	300, 345, 404, 696, 735, 913, 1221, 1477, 2058
FauNDI	CATATG	2 cut(s)	616, 1365
FbaI	TGATCA	1 cut(s)	673
FblI	GTMKAC	1 cut(s)	1553
Fnu4HI	GCNGC	8 cut(s)	181, 501, 1248, 1332, 1361, 1786, 1869, 2033
FriOI	GRGCYC	2 cut(s)	1585, 2142
Fsp4HI	GCNGC	8 cut(s)	181, 501, 1248, 1332, 1361, 1786, 1869, 2033
FspBI	CTAG	2 cut(s)	456, 2304
GlaI	GCGC	2 cut(s)	1928, 1967
GluI	GCNGC	8 cut(s)	181, 501, 1248, 1332, 1361, 1786, 1869, 2033
GsuI	CTGGAG	2 cut(s)	141, 1257
HaeIII	GGCC	6 cut(s)	153, 864, 1374, 1469, 1518, 1991
HapII	CCGG	4 cut(s)	389, 2002, 2269, 2352
HhaI	GCGC	2 cut(s)	1929, 1968
Hin1II	CATG	9 cut(s)	304, 349, 408, 700, 739, 917, 1225, 1481, 2062
Hin6I	GCGC	2 cut(s)	1927, 1966
HinP1I	GCGC	2 cut(s)	1927, 1966
HpaII	CCGG	4 cut(s)	389, 2002, 2269, 2352
HphI	GGTGA	6 cut(s)	50, 437, 500, 526, 1660, 2117
Hpy166II	GTNNAC	3 cut(s)	1554, 1815, 2323
Hpy188III	TCNNGA	9 cut(s)	301, 548, 656, 1049, 1526, 1589, 1856, 1945, 2240
Hpy8I	GTNNAC	3 cut(s)	1554, 1815, 2323
HpyAV	CCTTC	6 cut(s)	35, 1542, 1633, 1833, 2137, 2153
HpyCH4III	ACNGT	6 cut(s)	259, 805, 1681, 1879, 2027, 2231
HpyCH4IV	ACGT	3 cut(s)	10, 18, 401
HpyF10VI	GCNNNNNNNGC	9 cut(s)	722, 1034, 1331, 1524, 1926, 1997, 2017, 2038, 2300
HpySE526I	ACGT	3 cut(s)	10, 18, 401
Hsp92II	CATG	9 cut(s)	304, 349, 408, 700, 739, 917, 1225, 1481, 2062
HspAI	GCGC	2 cut(s)	1927, 1966
Ksp22I	TGATCA	1 cut(s)	673
LguI	GCTCTTC	2 cut(s)	596, 2307
LmnI	GCTCC	5 cut(s)	272, 1580, 2087, 2137, 2365
Lsp1109I	GCAGC	8 cut(s)	192, 487, 1259, 1318, 1347, 1797, 1855, 2044
LweI	GCATC	6 cut(s)	77, 541, 580, 1786, 1929, 1953
MabI	ACCWGGT	1 cut(s)	507
MaeI	CTAG	2 cut(s)	456, 2304
MaeII	ACGT	3 cut(s)	10, 18, 401
MaeIII	GTNAC	4 cut(s)	532, 832, 994, 1165
MfeI	CAATTG	1 cut(s)	2036
MflI	RGATCY	4 cut(s)	934, 1660, 1667, 2236
MhlI	GDGCHC	4 cut(s)	277, 336, 1585, 2142
MlyI	GAGTC	2 cut(s)	1493, 1895
MmeI	TCCRAC	4 cut(s)	7, 61, 1426, 1750
MseI	TTAA	3 cut(s)	1136, 1287, 1896
MslI	CAYNNNNRTG	4 cut(s)	339, 1226, 1482, 2118
MspA1I	CMGCKG	1 cut(s)	716
MspI	CCGG	4 cut(s)	389, 2002, 2269, 2352
MspR9I	CCNGG	6 cut(s)	176, 389, 432, 509, 1665, 2002
MunI	CAATTG	1 cut(s)	2036
MvaI	CCWGG	4 cut(s)	176, 432, 509, 1665
MvnI	CGCG	1 cut(s)	1527
MwoI	GCNNNNNNNGC	9 cut(s)	722, 1034, 1331, 1524, 1926, 1997, 2017, 2038, 2300
NciI	CCSGG	2 cut(s)	389, 2002
NdeI	CATATG	2 cut(s)	616, 1365
NlaIII	CATG	9 cut(s)	304, 349, 408, 700, 739, 917, 1225, 1481, 2062
NlaIV	GGNNCC	7 cut(s)	250, 1053, 1582, 1662, 1669, 1696, 2139
NmeAIII	GCCGAG	2 cut(s)	394, 1896
NmuCI	GTSAC	1 cut(s)	532
NruI	TCGCGA	1 cut(s)	1527
NspI	RCATGY	1 cut(s)	2062
NspV	TTCGAA	1 cut(s)	2310
PagI	TCATGA	1 cut(s)	300
PasI	CCCWGGG	1 cut(s)	175
PciSI	GCTCTTC	2 cut(s)	596, 2307
PcsI	WCGNNNNNNNCGW	1 cut(s)	1543
PfeI	GAWTC	9 cut(s)	140, 526, 704, 1128, 1427, 2108, 2168, 2279, 2344
PflMI	CCANNNNNTGG	2 cut(s)	80, 1184
PfoI	TCCNGGA	1 cut(s)	1663
PkrI	GCNGC	8 cut(s)	182, 502, 1249, 1333, 1362, 1787, 1870, 2034
PleI	GAGTC	2 cut(s)	1493, 1894
PpsI	GAGTC	2 cut(s)	1493, 1894
PpuMI	RGGWCCY	2 cut(s)	248, 1051
PshBI	ATTAAT	1 cut(s)	1287
Psp5II	RGGWCCY	2 cut(s)	248, 1051
Psp6I	CCWGG	4 cut(s)	174, 430, 507, 1663
PspGI	CCWGG	4 cut(s)	174, 430, 507, 1663
PspN4I	GGNNCC	7 cut(s)	250, 1053, 1582, 1662, 1669, 1696, 2139
PspPI	GGNCC	4 cut(s)	248, 1051, 1372, 1694
PspPPI	RGGWCCY	2 cut(s)	248, 1051
PstI	CTGCAG	2 cut(s)	247, 1467
PstNI	CAGNNNCTG	2 cut(s)	1016, 2212
PsuI	RGATCY	4 cut(s)	934, 1660, 1667, 2236
PvuII	CAGCTG	1 cut(s)	716
RruI	TCGCGA	1 cut(s)	1527
RsaI	GTAC	4 cut(s)	64, 506, 1272, 1683
RsaNI	GTAC	4 cut(s)	63, 505, 1271, 1682
RseI	CAYNNNNRTG	4 cut(s)	339, 1226, 1482, 2118
SapI	GCTCTTC	2 cut(s)	596, 2307
SaqAI	TTAA	3 cut(s)	1136, 1287, 1896
SatI	GCNGC	8 cut(s)	181, 501, 1248, 1332, 1361, 1786, 1869, 2033
Sau96I	GGNCC	4 cut(s)	248, 1051, 1372, 1694
SbfI	CCTGCAGG	1 cut(s)	1467
SchI	GAGTC	2 cut(s)	1493, 1895
ScrFI	CCNGG	6 cut(s)	176, 389, 432, 509, 1665, 2002
SdaI	CCTGCAGG	1 cut(s)	1467
SduI	GDGCHC	4 cut(s)	277, 336, 1585, 2142
SexAI	ACCWGGT	1 cut(s)	507
SfaNI	GCATC	6 cut(s)	77, 541, 580, 1786, 1929, 1953
SfcI	CTRYAG	3 cut(s)	111, 243, 1463
SfuI	TTCGAA	1 cut(s)	2310
SinI	GGWCC	3 cut(s)	248, 1051, 1694
SmiMI	CAYNNNNRTG	4 cut(s)	339, 1226, 1482, 2118
SmlI	CTYRAG	1 cut(s)	1292
SmoI	CTYRAG	1 cut(s)	1292
SpeI	ACTAGT	1 cut(s)	455
Sse8387I	CCTGCAGG	1 cut(s)	1467
SsiI	CCGC	3 cut(s)	725, 779, 2332
SspMI	CTAG	2 cut(s)	456, 2304
StyD4I	CCNGG	6 cut(s)	174, 387, 430, 507, 1663, 2000
StyI	CCWWGG	1 cut(s)	484
TaaI	ACNGT	6 cut(s)	259, 805, 1681, 1879, 2027, 2231
TaiI	ACGT	3 cut(s)	13, 21, 404
TaqI	TCGA	7 cut(s)	127, 202, 365, 749, 1946, 2193, 2310
TfiI	GAWTC	9 cut(s)	140, 526, 704, 1128, 1427, 2108, 2168, 2279, 2344
Tru1I	TTAA	3 cut(s)	1136, 1287, 1896
Tru9I	TTAA	3 cut(s)	1136, 1287, 1896
TscAI	CASTG	7 cut(s)	425, 1017, 1626, 1662, 2179, 2236, 2362
TseFI	GTSAC	1 cut(s)	532
TseI	GCWGC	8 cut(s)	180, 500, 1247, 1331, 1360, 1785, 1868, 2032
Tsp45I	GTSAC	1 cut(s)	532
TspDTI	ATGAA	9 cut(s)	685, 696, 809, 834, 1072, 1713, 1845, 2136, 2211
TspGWI	ACGGA	1 cut(s)	2352
TspRI	CASTG	7 cut(s)	425, 1017, 1626, 1662, 2179, 2236, 2362
Van91I	CCANNNNNTGG	2 cut(s)	80, 1184
VpaK11BI	GGWCC	3 cut(s)	248, 1051, 1694
VspI	ATTAAT	1 cut(s)	1287
XapI	RAATTY	7 cut(s)	283, 394, 1076, 1181, 1564, 1574, 2079
XceI	RCATGY	1 cut(s)	2062
XmiI	GTMKAC	1 cut(s)	1553
XspI	CTAG	2 cut(s)	456, 2304

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.