Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000006

Orthogroup ID

OG0001810

Physical Location & Seq

Genomic Coordinates Forward (+)

50573157 .. 50577669

Gene Structure 4513 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_6G00430440.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2592 bp

ATGATGGTAGGATTTAGAGTCCTTTGGATGCTAAATGCTACACTATTTGGAGTTCTAATTGTGCTGACTTCAAAGCTATATCATGTCCATGATCATGTCGAAGCAGCTCAGCCTCACCGCATTCTTGTAGACACAGACGTCGATACAGATGATGTTCTTGCTCTTCTTTATCTCTTGAAGCAAAACAGGACGGAATTCGATTTGAAGGCGATCACTATAAACTCAAATGGATGGAGCGATGCCGGGCACGCTGTGAATTACATCTATGACATCCTTTTCGTGATGGATCGAGACGACATTGCTGTTGGTGTGGGAGGTGAAGGTGGCATCTTGCCTAATGGTACCTTCCTTCCAAATGTTGGGGGTTATCACCCTATTATTGACCAGGGCACGTCAACAGCCGGTGGTTGCAGATACAGACAAGCAATTCCACCGGGGAAATATGGTCGTCTATACACAAATACAAACTATGGCATACGCAAGGCCTTGCTTCCTCAGGGTGGGAGAAAATATGTACCTGTAGAACAAGCTACAGCTCAACAAGTGATGAAAGATGCAGTGTCTGCAGGTTCCATCAGTGTGTTTGTTCTAGGCACACATACAAATTTAGCAATTTTTCTTATGACTAATCCTCACCTTAAGAAAAATATTGAGCATATATATGTCATGGGAGGTGCTATTGAACCTGGCATCGGTAATTTGTTCCCCCCAGACTCCAATCCATATGCAGAGTTCAATTTCTTTGGTGATCCTTTTGCTGCATACACGGTATTGCATTCTGGCGTTCCAATCACACTCATTCCTTTAGATGCGACAAGGACGATTCCTGTAAACAAGAATTTCTTTGCTGCATTTGAACAGAAACAAGATACATTTGAGGCACAATATAGCTTCCAGACCTTGAAAATGGTTCGTGATACATGGCCTAACAATCAGTTTCATGAGGAATATTGCTTCTGGGATTCTTTTATGGTTGGTGTTGCGCTGTCTCAAATGCGTAACTTAGAGAGATCTGATCAAGATCATGGCGGAGAAAATGAGTTTGCGGAAATGGAATATATGAACATCTCAGTGGTTACTTCAAACACACCTTATGGAATCTCAGATGGCTCAAATCCCCTCATCAGTGGGGGTTTGATTCCAAAGTTCAATTTACAGAAGAATGGAGTGCATAGTGGTCATGTTCAGCTAGGTTTGCAAGACCCATTTTGCCTTGTCAACCGGGGTAAAGGAAAATGTCAGGATGGTTACACACAGAAGGCAACTGGTCCGGAAGCCGTTTCTGTTCTTGTTGCAACAGAAGCTAAACCAAATTGTGACATTGACGAGAAGATGCTTACGAAAGAGTTCTATAAAAGTTTCTTGGAAGTTATAAATCGACCTAATAAGCAAACCGCACGATTTAGTAACACTAGAGCAGCACAGTTTCTGCCCGATGAGTATGAAAGAGTAGTCCAAAAGCAAAAAGCAGATTTTGAAAAGAAAAACACGATGGGTAAACCTGTAGTTTTTGACATGGATATGAGTGCCGGGGATTTTCTAGCCCTTCTATATCTGCTAAATTTACCTGCAGAACTGATCAACCTCCAGGGAATACTAGTTACTCCAAATGGGTGGGCAACTGCTGCAACCATAGAAATTCTATATGACATACTGCATATGATGGAGCGTGATGATATTCAAGTTGGTCTTGGAAATGTATTTGCAGTTGGACAGTCTTATTCATCTGTGACTTTCACTTCGCTCGGAGACTGCATCTACTCTAAGTCCATTCCTCACGGCAGCGGCGGCTCCTTGGACTCTGATACACTCTATGGATTTGCTCGTGACTTGCCTCGTAGTCCTAGAAGATACAAACCAGAAATTAGAGGAAGCCCTGGATTTGGACAACCGACTGCACTAGATGTTTGGAAGTCCATCGTAAAATCACTGCATCCAGGATCCAAGATTACTTTGTTGACCAATGGACCGTTGACAAATTTAGCCGAAATCATTCTTTCTGAGAACAACACAGACTCAGTGGTCCGGGAAGTATTTATCGTTGGGGGACACATTGTGGATGGAAATGATAATGCAAGAGGGAATGTTTTCACTGTTGCTTCAAATGAATTTGCAGAGTTTAACATATTTCTTGACCCTTTGGCTGCAAAAGCAGTTTTCGATTCCAAACTGAACATTACAATGATTCCATGGAAAACCCAAAAGCAAGTCAGTTCTTTCCAGAACATTCTCAATACATTGCAACAGCAGCTAACAAATAGTCATAGGACTCCTCAAGCTGCATTTGCCCAAAATCTAATTTCTAGTCTATGGCAACTAAAACAAAATCATCATAGCTACCATCACATGGACACATTTTTAGGAGAAATACTTGGTGCTGTGACCTTGGCTGGAAATGGAAATCATTCTCAATTGAACCAGACCTTTAAGTTTATTCCCCTCAAGGTTGTGGTTGAGGGAGATGAATCAGTAATCGGGCAGATGCTTATTGATGACCAAAAGCAAGCAAAAATGGTGACGGTACTATCTTCCATAAAATCTATAGTTGGGGCCGTCTGGCGGTACTTCTATGGAAGTGCTTTTGTTCAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

IU_nuc_hydro

Protein Analysis

863

Amino Acids

95.49

Weight (kDa)

5.9

Isoelectric Point (pI)

29.46

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
IU_nuc_hydro	PF01156	41 - 362	1.5e-39	Inosine-uridine preferring nucleoside hydrolase
IU_nuc_hydro	PF01156	502 - 842	9.3e-34	Inosine-uridine preferring nucleoside hydrolase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001810)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G18860 AT5G18860 AT5G18870 AT5G18890
fragaria_vesca	FvH4_4g16830 FvH4_4g16830 FvH4_4g16850 FvH4_4g16850 FvH4_4g16850 FvH4_4g16850 FvH4_4g16850
malus_domestica	MD12G1227000.v1.1 MD13G1176200.v1.1 MD16G1178000.v1.1
prunus_persica	Prupe.1G145300_v2.0.a1 Prupe.1G145300_v2.0.a1 Prupe.6G332600_v2.0.a1 Prupe.6G332600_v2.0.a1
pyrus_communis	pycom12g21140 pycom12g21170 pycom13g15200 pycom16g14950
rosa_chinensis	RchiOBHm_Chr3g0453471 RchiOBHm_Chr4g0420411 RchiOBHm_Chr4g0420421
rosa_laevigata	RLG00000007765 RLG00000025511
rosa_multiflora	Rmu_sc0000510.1_g000010 Rmu_sc0002248.1_g000022
rosa_roxburghii	Rroxscaffold_5G00363050 Rroxscaffold_6G00430440
rosa_rugosa	Rorug02G0649300 Rorug04G0163700
rosa_samantha	Rh3AG052100 Rh3AG052300 Rh3BG053600 Rh3BG053700 Rh3CG052900 Rh3CG053100 Rh3DG053700 Rh3DG053900 Rh4AG225200 Rh4BG228000 Rh4CG239500 Rh4DG223700
rosa_wichuraiana	Rw3G004020 Rw4G019440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1373
AasI	GACNNNNNNGTC	2 cut(s)	137, 2021
AatII	GACGTC	1 cut(s)	141
Acc36I	ACCTGC	2 cut(s)	557, 1576
Acc65I	GGTACC	1 cut(s)	341
AccB1I	GGYRCC	1 cut(s)	341
AccB7I	CCANNNNNTGG	2 cut(s)	359, 2347
AccI	GTMKAC	1 cut(s)	129
AccIII	TCCGGA	1 cut(s)	1270
AciI	CCGC	7 cut(s)	118, 1029, 1046, 1395, 1785, 1788, 2560
AclWI	GGATC	4 cut(s)	294, 743, 1935, 1948
AcsI	RAATTY	7 cut(s)	194, 604, 838, 1561, 1638, 1978, 2108
AcyI	GRCGYC	1 cut(s)	138
AdeI	CACNNNGTG	2 cut(s)	253, 2056
AfaI	GTAC	4 cut(s)	343, 516, 2523, 2564
AfiI	CCNNNNNNNGG	6 cut(s)	359, 500, 692, 1883, 2347, 2559
AflII	CTTAAG	1 cut(s)	638
AhlI	ACTAGT	1 cut(s)	1597
AjiI	CACGTC	1 cut(s)	393
AjnI	CCWGG	5 cut(s)	384, 685, 1587, 1876, 1936
Alw26I	GTCTC	3 cut(s)	285, 993, 1743
AlwI	GGATC	4 cut(s)	294, 743, 1935, 1948
AlwNI	CAGNNNCTG	2 cut(s)	563, 1429
Aor13HI	TCCGGA	1 cut(s)	1270
AoxI	GGCC	3 cut(s)	483, 923, 2550
ApeKI	GCWGC	9 cut(s)	104, 758, 848, 1418, 1625, 1782, 2144, 2248, 2279
ApoI	RAATTY	7 cut(s)	194, 604, 838, 1561, 1638, 1978, 2108
ArsI	GACNNNNNNTTYG	4 cut(s)	260, 292, 1723, 1755
Asp700I	GAANNNNTTC	4 cut(s)	1346, 1992, 2087, 2404
Asp718I	GGTACC	1 cut(s)	341
AspLEI	GCGC	1 cut(s)	985
AspS9I	GGNCC	4 cut(s)	1268, 1967, 2023, 2550
AsuC2I	CCSGG	5 cut(s)	244, 435, 1223, 1531, 2027
AsuHPI	GGTGA	6 cut(s)	107, 329, 362, 626, 758, 2527
AvaII	GGWCC	3 cut(s)	1268, 1967, 2023
AxyI	CCTNAGG	1 cut(s)	495
BaeGI	GKGCMC	2 cut(s)	249, 392
BamHI	GGATCC	1 cut(s)	1940
BanI	GGYRCC	1 cut(s)	341
BauI	CACGAG	1 cut(s)	1824
BbvI	GCAGC	9 cut(s)	116, 745, 835, 1430, 1612, 1794, 2131, 2260, 2266
BceAI	ACGGC	3 cut(s)	1262, 1795, 2537
BciT130I	CCWGG	5 cut(s)	386, 687, 1589, 1878, 1938
BclI	TGATCA	3 cut(s)	91, 1015, 1578
BcnI	CCSGG	5 cut(s)	244, 435, 1223, 1531, 2027
BcoDI	GTCTC	3 cut(s)	285, 993, 1743
BcuI	ACTAGT	1 cut(s)	1597
BfaI	CTAG	8 cut(s)	590, 1190, 1413, 1541, 1598, 1845, 1901, 2304
BfmI	CTRYAG	6 cut(s)	519, 531, 564, 1503, 1569, 2541
BfrI	CTTAAG	1 cut(s)	638
BfuAI	ACCTGC	2 cut(s)	557, 1576
BglII	AGATCT	1 cut(s)	1010
BlpI	GCTNAGC	1 cut(s)	108
Bme18I	GGWCC	3 cut(s)	1268, 1967, 2023
BmgBI	CACGTC	1 cut(s)	393
BmgT120I	GGNCC	4 cut(s)	1268, 1967, 2023, 2550
BmiI	GGNNCC	5 cut(s)	343, 571, 1792, 1942, 2551
BpmI	CTGGAG	1 cut(s)	1571
Bpu1102I	GCTNAGC	1 cut(s)	108
BpuEI	CTTGAG	2 cut(s)	2259, 2426
BpuMI	CCSGG	5 cut(s)	244, 435, 1223, 1531, 2027
BsaBI	GATNNNNATC	1 cut(s)	1020
BsaHI	GRCGYC	1 cut(s)	138
BsaJI	CCNNGG	9 cut(s)	385, 434, 1222, 1530, 1588, 1794, 1876, 2189, 2385
BsaWI	WCCGGW	1 cut(s)	1270
Bsc4I	CCNNNNNNNGG	6 cut(s)	359, 500, 692, 1883, 2347, 2559
Bse118I	RCCGGY	1 cut(s)	401
Bse1I	ACTGG	1 cut(s)	1270
Bse21I	CCTNAGG	1 cut(s)	495
Bse3DI	GCAATG	2 cut(s)	297, 2237
Bse8I	GATNNNNATC	1 cut(s)	1020
BseAI	TCCGGA	1 cut(s)	1270
BseBI	CCWGG	5 cut(s)	386, 687, 1589, 1878, 1938
BseDI	CCNNGG	9 cut(s)	385, 434, 1222, 1530, 1588, 1794, 1876, 2189, 2385
BseGI	GGATG	6 cut(s)	33, 236, 270, 1249, 1933, 2065
BseJI	GATNNNNATC	1 cut(s)	1020
BseLI	CCNNNNNNNGG	6 cut(s)	359, 500, 692, 1883, 2347, 2559
BseMI	GCAATG	2 cut(s)	297, 2237
BseMII	CTCAG	6 cut(s)	122, 509, 1083, 1116, 1992, 2031
BseNI	ACTGG	1 cut(s)	1270
BseRI	GAGGAG	1 cut(s)	2262
BseSI	GKGCMC	2 cut(s)	249, 392
BseXI	GCAGC	9 cut(s)	116, 745, 835, 1430, 1612, 1794, 2131, 2260, 2266
BsgI	GTGCAG	1 cut(s)	1881
BshFI	GGCC	3 cut(s)	485, 925, 2552
BshNI	GGYRCC	1 cut(s)	341
BsiSI	CCGG	7 cut(s)	243, 402, 434, 1222, 1271, 1530, 2026
BslFI	GGGAC	1 cut(s)	2061
BslI	CCNNNNNNNGG	6 cut(s)	359, 500, 692, 1883, 2347, 2559
BsmAI	GTCTC	3 cut(s)	285, 993, 1743
BsmBI	CGTCTC	1 cut(s)	285
BsmFI	GGGAC	1 cut(s)	2061
BsmI	GAATGC	2 cut(s)	120, 775
BsnI	GGCC	3 cut(s)	485, 925, 2552
Bsp1286I	GDGCHC	2 cut(s)	249, 392
Bsp13I	TCCGGA	1 cut(s)	1270
Bsp143I	GATC	9 cut(s)	91, 210, 286, 748, 1010, 1015, 1021, 1578, 1940
Bsp1720I	GCTNAGC	1 cut(s)	108
Bsp19I	CCATGG	1 cut(s)	2189
BspACI	CCGC	7 cut(s)	118, 1029, 1046, 1395, 1785, 1788, 2560
BspANI	GGCC	3 cut(s)	485, 925, 2552
BspCNI	CTCAG	6 cut(s)	121, 508, 1082, 1115, 1993, 2030
BspEI	TCCGGA	1 cut(s)	1270
BspHI	TCATGA	1 cut(s)	940
BspLI	GGNNCC	5 cut(s)	343, 571, 1792, 1942, 2551
BspMAI	CTGCAG	2 cut(s)	568, 1573
BspMI	ACCTGC	2 cut(s)	557, 1576
BspPI	GGATC	4 cut(s)	294, 743, 1935, 1948
BspQI	GCTCTTC	1 cut(s)	168
BspT107I	GGYRCC	1 cut(s)	341
BspTI	CTTAAG	1 cut(s)	638
BsrDI	GCAATG	2 cut(s)	297, 2237
BsrFI	RCCGGY	1 cut(s)	401
BsrI	ACTGG	1 cut(s)	1270
BssAI	RCCGGY	1 cut(s)	401
BssECI	CCNNGG	9 cut(s)	385, 434, 1222, 1530, 1588, 1794, 1876, 2189, 2385
BssMI	GATC	9 cut(s)	91, 210, 286, 748, 1010, 1015, 1021, 1578, 1940
BssNI	GRCGYC	1 cut(s)	138
BssSI	CACGAG	1 cut(s)	1824
BssT1I	CCWWGG	3 cut(s)	1794, 2189, 2385
Bst2BI	CACGAG	1 cut(s)	1824
Bst2UI	CCWGG	5 cut(s)	386, 687, 1589, 1878, 1938
Bst4CI	ACNGT	6 cut(s)	769, 1425, 1716, 1971, 2095, 2521
Bst6I	CTCTTC	1 cut(s)	168
BstACI	GRCGYC	1 cut(s)	138
BstAFI	CTTAAG	1 cut(s)	638
BstAPI	GCANNNNNTGC	2 cut(s)	563, 1625
BstC8I	GCNNGC	2 cut(s)	249, 2505
BstDEI	CTNAG	8 cut(s)	108, 495, 1003, 1069, 1102, 1764, 2001, 2017
BstDSI	CCRYGG	1 cut(s)	2189
BstF5I	GGATG	6 cut(s)	33, 236, 270, 1249, 1933, 2065
BstHHI	GCGC	1 cut(s)	985
BstKTI	GATC	9 cut(s)	94, 213, 289, 751, 1013, 1018, 1024, 1581, 1943
BstMAI	GTCTC	3 cut(s)	285, 993, 1743
BstMBI	GATC	9 cut(s)	91, 210, 286, 748, 1010, 1015, 1021, 1578, 1940
BstMWI	GCNNNNNNNGC	9 cut(s)	248, 563, 1195, 1301, 1625, 1788, 2150, 2248, 2285
BstNI	CCWGG	5 cut(s)	386, 687, 1589, 1878, 1938
BstSFI	CTRYAG	6 cut(s)	519, 531, 564, 1503, 1569, 2541
BstSLI	GKGCMC	2 cut(s)	249, 392
BstV1I	GCAGC	9 cut(s)	116, 745, 835, 1430, 1612, 1794, 2131, 2260, 2266
BstX2I	RGATCY	2 cut(s)	1010, 1940
BstXI	CCANNNNNNTGG	1 cut(s)	1614
BstYI	RGATCY	2 cut(s)	1010, 1940
Bsu36I	CCTNAGG	1 cut(s)	495
BsuRI	GGCC	3 cut(s)	485, 925, 2552
BtgI	CCRYGG	1 cut(s)	2189
BtgZI	GCGATG	1 cut(s)	252
BtrI	CACGTC	1 cut(s)	393
BtsCI	GGATG	6 cut(s)	33, 236, 270, 1249, 1933, 2065
BtsI	GCAGTG	2 cut(s)	564, 1928
BtsIMutI	CAGTG	7 cut(s)	564, 583, 1077, 1132, 1928, 2025, 2091
BveI	ACCTGC	2 cut(s)	557, 1576
Cac8I	GCNNGC	2 cut(s)	249, 2505
CaiI	CAGNNNCTG	2 cut(s)	563, 1429
CciI	TCATGA	1 cut(s)	940
CfoI	GCGC	1 cut(s)	985
Cfr10I	RCCGGY	1 cut(s)	401
Cfr13I	GGNCC	4 cut(s)	1268, 1967, 2023, 2550
Csp6I	GTAC	4 cut(s)	342, 515, 2522, 2563
CviQI	GTAC	4 cut(s)	342, 515, 2522, 2563
DdeI	CTNAG	8 cut(s)	108, 495, 1003, 1069, 1102, 1764, 2001, 2017
DpnI	GATC	9 cut(s)	93, 212, 288, 750, 1012, 1017, 1023, 1580, 1942
DpnII	GATC	9 cut(s)	91, 210, 286, 748, 1010, 1015, 1021, 1578, 1940
DraIII	CACNNNGTG	2 cut(s)	253, 2056
DrdI	GACNNNNNNGTC	2 cut(s)	137, 2021
DseDI	GACNNNNNNGTC	2 cut(s)	137, 2021
Eam1104I	CTCTTC	1 cut(s)	168
EarI	CTCTTC	1 cut(s)	168
EciI	GGCGGA	1 cut(s)	1044
Eco130I	CCWWGG	3 cut(s)	1794, 2189, 2385
Eco147I	AGGCCT	1 cut(s)	485
Eco47I	GGWCC	3 cut(s)	1268, 1967, 2023
Eco81I	CCTNAGG	1 cut(s)	495
EcoRI	GAATTC	1 cut(s)	194
EcoRII	CCWGG	5 cut(s)	384, 685, 1587, 1876, 1936
EcoT14I	CCWWGG	3 cut(s)	1794, 2189, 2385
ErhI	CCWWGG	3 cut(s)	1794, 2189, 2385
Esp3I	CGTCTC	1 cut(s)	285
FalI	AAGNNNNNCTT	4 cut(s)	827, 859, 1674, 1706
FaqI	GGGAC	1 cut(s)	2061
FauNDI	CATATG	2 cut(s)	724, 1659
FbaI	TGATCA	3 cut(s)	91, 1015, 1578
FblI	GTMKAC	1 cut(s)	129
FokI	GGATG	6 cut(s)	40, 243, 257, 1256, 1920, 2072
FspBI	CTAG	8 cut(s)	590, 1190, 1413, 1541, 1598, 1845, 1901, 2304
GlaI	GCGC	1 cut(s)	984
GsuI	CTGGAG	1 cut(s)	1571
HaeIII	GGCC	3 cut(s)	485, 925, 2552
HapII	CCGG	7 cut(s)	243, 402, 434, 1222, 1271, 1530, 2026
HhaI	GCGC	1 cut(s)	985
Hin1I	GRCGYC	1 cut(s)	138
Hin6I	GCGC	1 cut(s)	983
HinP1I	GCGC	1 cut(s)	983
HincII	GTYRAC	4 cut(s)	396, 1219, 1959, 1974
HindII	GTYRAC	4 cut(s)	396, 1219, 1959, 1974
HpaII	CCGG	7 cut(s)	243, 402, 434, 1222, 1271, 1530, 2026
HphI	GGTGA	6 cut(s)	107, 329, 362, 626, 758, 2527
Hpy166II	GTNNAC	7 cut(s)	130, 396, 832, 1219, 1499, 1959, 1974
Hpy188I	TCNGA	5 cut(s)	1015, 1105, 1748, 1804, 2002
Hpy8I	GTNNAC	7 cut(s)	130, 396, 832, 1219, 1499, 1959, 1974
Hpy99I	CGWCG	1 cut(s)	143
HpyAV	CCTTC	6 cut(s)	199, 314, 355, 359, 1252, 1556
HpyCH4III	ACNGT	6 cut(s)	769, 1425, 1716, 1971, 2095, 2521
HpyCH4IV	ACGT	2 cut(s)	138, 392
HpyF10VI	GCNNNNNNNGC	9 cut(s)	248, 563, 1195, 1301, 1625, 1788, 2150, 2248, 2285
HpyF3I	CTNAG	8 cut(s)	108, 495, 1003, 1069, 1102, 1764, 2001, 2017
HpySE526I	ACGT	2 cut(s)	138, 392
Hsp92I	GRCGYC	1 cut(s)	138
HspAI	GCGC	1 cut(s)	983
Kpn2I	TCCGGA	1 cut(s)	1270
KpnI	GGTACC	1 cut(s)	345
Ksp22I	TGATCA	3 cut(s)	91, 1015, 1578
Kzo9I	GATC	9 cut(s)	91, 210, 286, 748, 1010, 1015, 1021, 1578, 1940
LguI	GCTCTTC	1 cut(s)	168
LmnI	GCTCC	3 cut(s)	234, 1666, 1796
Lsp1109I	GCAGC	9 cut(s)	116, 745, 835, 1430, 1612, 1794, 2131, 2260, 2266
MaeI	CTAG	8 cut(s)	590, 1190, 1413, 1541, 1598, 1845, 1901, 2304
MaeII	ACGT	2 cut(s)	138, 392
MalI	GATC	9 cut(s)	93, 212, 288, 750, 1012, 1017, 1023, 1580, 1942
MboI	GATC	9 cut(s)	91, 210, 286, 748, 1010, 1015, 1021, 1578, 1940
MboII	GAAGA	5 cut(s)	155, 1171, 1342, 1860, 2520
MfeI	CAATTG	1 cut(s)	2411
MflI	RGATCY	2 cut(s)	1010, 1940
MhlI	GDGCHC	2 cut(s)	249, 392
MlyI	GAGTC	5 cut(s)	27, 707, 1793, 2009, 2263
MmeI	TCCRAC	1 cut(s)	1690
MroI	TCCGGA	1 cut(s)	1270
MroXI	GAANNNNTTC	4 cut(s)	1346, 1992, 2087, 2404
MseI	TTAA	3 cut(s)	639, 2121, 2427
MslI	CAYNNNNRTG	7 cut(s)	87, 93, 578, 660, 1070, 1520, 2180
MspA1I	CMGCKG	1 cut(s)	1785
MspCI	CTTAAG	1 cut(s)	638
MspI	CCGG	7 cut(s)	243, 402, 434, 1222, 1271, 1530, 2026
MunI	CAATTG	1 cut(s)	2411
Mva1269I	GAATGC	2 cut(s)	120, 775
MvaI	CCWGG	5 cut(s)	386, 687, 1589, 1878, 1938
MwoI	GCNNNNNNNGC	9 cut(s)	248, 563, 1195, 1301, 1625, 1788, 2150, 2248, 2285
NciI	CCSGG	5 cut(s)	244, 435, 1223, 1531, 2027
NcoI	CCATGG	1 cut(s)	2189
NdeI	CATATG	2 cut(s)	724, 1659
NdeII	GATC	9 cut(s)	91, 210, 286, 748, 1010, 1015, 1021, 1578, 1940
NlaIV	GGNNCC	5 cut(s)	343, 571, 1792, 1942, 2551
NmuCI	GTSAC	5 cut(s)	1316, 1729, 1826, 2380, 2515
PagI	TCATGA	1 cut(s)	940
PceI	AGGCCT	1 cut(s)	485
PciSI	GCTCTTC	1 cut(s)	168
PctI	GAATGC	2 cut(s)	120, 775
PdmI	GAANNNNTTC	4 cut(s)	1346, 1992, 2087, 2404
PfeI	GAWTC	7 cut(s)	823, 962, 1098, 1138, 2162, 2185, 2465
PflMI	CCANNNNNTGG	2 cut(s)	359, 2347
PfoI	TCCNGGA	2 cut(s)	1936, 2025
PleI	GAGTC	5 cut(s)	26, 707, 1793, 2009, 2263
PpsI	GAGTC	5 cut(s)	26, 707, 1793, 2009, 2263
PsiI	TTATAA	1 cut(s)	1373
Psp6I	CCWGG	5 cut(s)	384, 685, 1587, 1876, 1936
PspGI	CCWGG	5 cut(s)	384, 685, 1587, 1876, 1936
PspN4I	GGNNCC	5 cut(s)	343, 571, 1792, 1942, 2551
PspPI	GGNCC	4 cut(s)	1268, 1967, 2023, 2550
PstI	CTGCAG	2 cut(s)	568, 1573
PstNI	CAGNNNCTG	2 cut(s)	563, 1429
PsuI	RGATCY	2 cut(s)	1010, 1940
RsaI	GTAC	4 cut(s)	343, 516, 2523, 2564
RsaNI	GTAC	4 cut(s)	342, 515, 2522, 2563
RseI	CAYNNNNRTG	7 cut(s)	87, 93, 578, 660, 1070, 1520, 2180
SapI	GCTCTTC	1 cut(s)	168
SaqAI	TTAA	3 cut(s)	639, 2121, 2427
Sau3AI	GATC	9 cut(s)	91, 210, 286, 748, 1010, 1015, 1021, 1578, 1940
Sau96I	GGNCC	4 cut(s)	1268, 1967, 2023, 2550
SchI	GAGTC	5 cut(s)	27, 707, 1793, 2009, 2263
SduI	GDGCHC	2 cut(s)	249, 392
SfcI	CTRYAG	6 cut(s)	519, 531, 564, 1503, 1569, 2541
SinI	GGWCC	3 cut(s)	1268, 1967, 2023
SmiMI	CAYNNNNRTG	7 cut(s)	87, 93, 578, 660, 1070, 1520, 2180
SmlI	CTYRAG	3 cut(s)	638, 2274, 2441
SmoI	CTYRAG	3 cut(s)	638, 2274, 2441
SpeI	ACTAGT	1 cut(s)	1597
SseBI	AGGCCT	1 cut(s)	485
SsiI	CCGC	7 cut(s)	118, 1029, 1046, 1395, 1785, 1788, 2560
SspI	AATATT	2 cut(s)	649, 950
SspMI	CTAG	8 cut(s)	590, 1190, 1413, 1541, 1598, 1845, 1901, 2304
StuI	AGGCCT	1 cut(s)	485
StyI	CCWWGG	3 cut(s)	1794, 2189, 2385
TaaI	ACNGT	6 cut(s)	769, 1425, 1716, 1971, 2095, 2521
TaiI	ACGT	2 cut(s)	141, 395
TaqI	TCGA	6 cut(s)	99, 141, 198, 289, 1378, 2160
TauI	GCSGC	2 cut(s)	1788, 1791
TfiI	GAWTC	7 cut(s)	823, 962, 1098, 1138, 2162, 2185, 2465
Tru1I	TTAA	3 cut(s)	639, 2121, 2427
Tru9I	TTAA	3 cut(s)	639, 2121, 2427
TscAI	CASTG	7 cut(s)	564, 583, 1077, 1132, 1935, 2025, 2098
TseFI	GTSAC	5 cut(s)	1316, 1729, 1826, 2380, 2515
TseI	GCWGC	9 cut(s)	104, 758, 848, 1418, 1625, 1782, 2144, 2248, 2279
Tsp45I	GTSAC	5 cut(s)	1316, 1729, 1826, 2380, 2515
TspDTI	ATGAA	7 cut(s)	563, 929, 1076, 1458, 1713, 2121, 2478
TspGWI	ACGGA	1 cut(s)	206
TspRI	CASTG	7 cut(s)	564, 583, 1077, 1132, 1935, 2025, 2098
Van91I	CCANNNNNTGG	2 cut(s)	359, 2347
Vha464I	CTTAAG	1 cut(s)	638
VpaK11BI	GGWCC	3 cut(s)	1268, 1967, 2023
XapI	RAATTY	7 cut(s)	194, 604, 838, 1561, 1638, 1978, 2108
XmiI	GTMKAC	1 cut(s)	129
XmnI	GAANNNNTTC	4 cut(s)	1346, 1992, 2087, 2404
XspI	CTAG	8 cut(s)	590, 1190, 1413, 1541, 1598, 1845, 1901, 2304
ZraI	GACGTC	1 cut(s)	139

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.