MD13G1000100.v1.1

sphingoid long-chain bases kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr13
Physical Location & Seq
Reverse (-)
10113 .. 17802
7690 bp
Loading structure...
UTR
Exon/CDS
Intron
MD13G1000100.v1.1.491

Sequence Viewer

Length: 2319 bp
ATGCAGAAGAGTGGGAGTGTTTCCAAGAACAGTTTGAGAGTAACGACGCCCCAGCAGTCTCTCAGGCGACTGGGATTGTGCTCCCAGATAGCTACTGCAACTGGGGGCCAACACTCCTCCCCAATTGTCTTCCCTGAGAAACAGAAGCGACAGAAGATCAAGGCTTCCAAGACTCCAACCCCTGCCTCCACTGAGGATCCCAACACACTAAAGACCTTCGAGCACAGGATTGACATTCCGGCTTCTGCTGCTGGAGATGAAAAGTCTGATCTGTTGGGTTATGTCGTCTTCACCGGAAAATTAGTGTTGGACAAAAGAAAAACCAGCAGTATAAACACTTCTTCTTCTACTGATGCACAACAAACCACCTCCTCCTCTGCTGATATTCCCAACCAGGAAGCTGTTGCTGGCAAGCTTACCAGTAAGGCTTTAATTTGGGGTTCTCACATGCTGCATCTTGATGATGTCATCTCAGTTTCGTACCATGTTGGTCTCAGACATTTCACCGTGCATTCTTATCCCTTGAAAAAGGGTTCTTGTGGCCTTCCATGTTTTATAAAGCCTCGCAGAAGACGTAAGGACTTTCGATTCTCGGCTTCTAGCATAGAAGAGGCAGTTCAGTGGGTTGGGGGGTTTGCTGATCAGCAGTGTTATGTGAATTGCTTGCCTCATCCATTGCTATCTTCTAAAAAGCAGGCTTCTTCAGAATTAATCCCAATTGATACTCCTCCTGAATTAATTTTCAAATGTAAGAGTCCGCCAAAAATGCTTGTTATATTAAATCCACGATCCGGACGTGGCCGTTCAAGTAAGGTTTTTCACAACGTCGTTGAACCTATATTTAAGCTTGCAGGTTTCAAAGTGGAGGTAGTTAAAACAACGTCTGCAGGTCATGCTAGGAAACTTGCCTCTACTGTTGACATTAGCACTTGTCCTGATGGAATCATTTGTGTTGGGGGTGATGGAATTATTAATGAGGTTCTAAATGGTTTACTAAGTAGAGACAACCAACAAGAAGGAATTTCTATACCAATTGGGATTATACCTGCTGGTTCTGATAATTCATTAGTTTGGACAGTCCTTGGAGTTAGAGATCCAGTTTCTGCTGCAATGGCCATTGTCAAGGGGGGTCTTACAGCTACAGATGTTTTTGCTGTTGAGTGGATTCAGACTGGCGTTATTCACTTTGGGATGACAGTCTCATATTATGGTTTTGTGAGTGATGTATTGGAGCTCTCTGAGAAATACCAAAAGCGCTTTGGTCCTCTTCGTTATTTTGTTGCTGGATTTCTCAAATTCTTGTGCCTACCAAAGTACAGCTATGAAGTTGAGTATCTTCCAGCTTTAAAAGAGGACGTAGAAGGAAAACTCTCAGAAAGGGAAGTAGTTGACATGTCAGAACTATACAGAGACATCATGAGGAGATCAAACACGGATGGGATTCCAAGAGCCTCTAGTTTGTCAAGTATCGACTCCATCATGACTCCTACTCGAATGTCTGGTGGAGACTTGGATACAAACTGCAGTAGCAGTCATGCTAGCATTGAACCATCTGAGTACGTACGTGGCCTAGATCCGAAATCAAAACGACTTTCAACGGGAAGGAGCAATGTAACTGCAGAGCCAGAAGTTATTCATCCTCAGCTTCCTCTGTCAACAACTCCAAATTGGCCAAGGACCCGCTCTAAGTCGAGAGCAGATAAAGGATGGTCTGGATTGACAGCCACACATGATGCCTCCAGATCTTCTTGGTGCAATGCTGGAACAAATGATAAAGAGGATATATCATCAACGCTGTCTGATCCAGGTCCAATTTGGGATGCGGAACCCAAGTGGGACAGTGAACCTAATTGGGATGTGGAAAATCCTATTGAATTACCAGGGCCATCAGATGATGTGGAAGCAGGAAAAAAGGAAGTTGTTCCTAGGTATGAAGATAAATGGGTTGTTACGAAGGGTCAATTCCTCGGTATTCTGGTTTGCAATCATGCTTGCAGAACTGTTCAGAGTTCTCAAGTGGTGGCGCCAAAAGCTGAGCATGATGACAACACCTTGGATTTGCTCCTAGTTCATGGAAGTGGGCGGTTAAGGCTTTTGAGATTTTTCATGCTACTGCAGATGGGTAAACACCTTTCACTGCCATACGTGGAAAATGTCAAGGCAAAGTCAGTGAAGATTAAGGTATCAGGAAAGCACACCCAAAATGGTTGTGGTATTGATGGAGAGCTTTTTCCACTCAACGGGCAAGTCATTTCTTCTTTGCTTCCAGAACAGTGCAGACTTATTGGTCGCTCCCTTCCCGCTAACCCTCACGTCTGA

Protein Analysis

773

Amino Acids

84.45

Weight (kDa)

8.75

Isoelectric Point (pI)

37.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DAGK_cat PF00781 255 - 385 7.5e-30 Diacylglycerol kinase catalytic domain
YegS_C PF19279 670 - 748 8.8e-11 YegS C-terminal NAD kinase beta sandwich-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 557
AasI GACNNNNNNGTC 1 cut(s) 2286
Acc36I ACCTGC 3 cut(s) 842, 878, 1054
AccB1I GGYRCC 1 cut(s) 2023
AccBSI CCGCTC 1 cut(s) 1683
AccIII TCCGGA 1 cut(s) 791
AciI CCGC 5 cut(s) 758, 1681, 1823, 2083, 2301
AclWI GGATC 6 cut(s) 191, 204, 783, 1088, 1568, 1796
AcoI YGGCCR 3 cut(s) 799, 1113, 1670
AcsI RAATTY 2 cut(s) 1020, 1295
AcuI CTGAAG 1 cut(s) 687
AcyI GRCGYC 2 cut(s) 47, 2024
AfaI GTAC 4 cut(s) 482, 1316, 1559, 1563
AfeI AGCGCT 1 cut(s) 1256
AfiI CCNNNNNNNGG 2 cut(s) 791, 2240
AflIII ACRYGT 1 cut(s) 1392
AgsI TTSAA 8 cut(s) 526, 745, 807, 833, 859, 1547, 1596, 1874
AjiI CACGTC 2 cut(s) 797, 2314
AjnI CCWGG 3 cut(s) 393, 1804, 1879
Alw21I GWGCWC 3 cut(s) 83, 225, 1236
Alw26I GTCTC 6 cut(s) 63, 497, 996, 1204, 1404, 1500
AlwI GGATC 6 cut(s) 191, 204, 783, 1088, 1568, 1796
AlwNI CAGNNNCTG 1 cut(s) 1103
Aor13HI TCCGGA 1 cut(s) 791
Aor51HI AGCGCT 1 cut(s) 1256
AoxI GGCC 7 cut(s) 106, 541, 799, 1113, 1567, 1670, 1883
ApeKI GCWGC 3 cut(s) 248, 451, 1106
ApoI RAATTY 2 cut(s) 1020, 1295
AseI ATTAAT 3 cut(s) 710, 737, 972
Asp700I GAANNNNTTC 2 cut(s) 1632, 1920
AspA2I CCTAGG 1 cut(s) 1925
AspLEI GCGC 2 cut(s) 1257, 2026
AspS9I GGNCC 5 cut(s) 106, 1262, 1677, 1808, 1883
AsuHPI GGTGA 3 cut(s) 283, 496, 971
AsuNHI GCTAGC 1 cut(s) 1538
AvaII GGWCC 3 cut(s) 1262, 1677, 1808
AvrII CCTAGG 1 cut(s) 1925
BalI TGGCCA 2 cut(s) 1115, 1672
BamHI GGATCC 1 cut(s) 196
BanI GGYRCC 1 cut(s) 2023
BanII GRGCYC 1 cut(s) 1236
BarI GAAGNNNNNNTAC 2 cut(s) 322, 354
BbsI GAAGAC 3 cut(s) 121, 280, 577
Bbv12I GWGCWC 3 cut(s) 83, 225, 1236
BbvCI CCTCAGC 1 cut(s) 1641
BbvI GCAGC 3 cut(s) 235, 438, 1093
BccI CCATC 9 cut(s) 932, 956, 1430, 1484, 1558, 1701, 1894, 2113, 2213
BceAI ACGGC 1 cut(s) 786
BciT130I CCWGG 3 cut(s) 395, 1806, 1881
BciVI GTATCC 1 cut(s) 1507
BclI TGATCA 1 cut(s) 640
BcoDI GTCTC 6 cut(s) 63, 497, 996, 1204, 1404, 1500
BfaI CTAG 7 cut(s) 600, 897, 1455, 1539, 1571, 1926, 2066
BfmI CTRYAG 5 cut(s) 885, 1140, 1522, 1617, 2114
BfoI RGCGCY 2 cut(s) 1258, 2027
BfuAI ACCTGC 3 cut(s) 842, 878, 1054
BfuI GTATCC 1 cut(s) 1507
BglII AGATCT 1 cut(s) 1742
BisI GCNGC 3 cut(s) 249, 452, 1107
BlnI CCTAGG 1 cut(s) 1925
BlpI GCTNAGC 1 cut(s) 2034
BlsI GCNGC 3 cut(s) 250, 453, 1108
Bme1390I CCNGG 3 cut(s) 395, 1806, 1881
Bme18I GGWCC 3 cut(s) 1262, 1677, 1808
BmgBI CACGTC 2 cut(s) 797, 2314
BmgT120I GGNCC 5 cut(s) 106, 1262, 1677, 1808, 1883
BmiI GGNNCC 5 cut(s) 107, 198, 1679, 1827, 2025
BmrFI CCNGG 3 cut(s) 395, 1806, 1881
BmrI ACTGGG 2 cut(s) 80, 111
BmsI GCATC 4 cut(s) 343, 463, 1723, 1810
BmtI GCTAGC 1 cut(s) 1542
BmuI ACTGGG 2 cut(s) 80, 111
BpiI GAAGAC 3 cut(s) 121, 280, 577
BpmI CTGGAG 2 cut(s) 273, 1723
Bpu10I CCTNAGC 1 cut(s) 1641
Bpu1102I GCTNAGC 1 cut(s) 2034
BpuEI CTTGAG 1 cut(s) 1998
BsaAI YACGTR 3 cut(s) 1561, 1565, 2146
BsaHI GRCGYC 2 cut(s) 47, 2024
BsaI GGTCTC 1 cut(s) 497
BsaJI CCNNGG 6 cut(s) 1081, 1673, 1880, 1925, 1966, 2052
BsaWI WCCGGW 2 cut(s) 293, 791
Bsc4I CCNNNNNNNGG 2 cut(s) 791, 2240
Bse1I ACTGG 5 cut(s) 75, 106, 420, 1097, 1177
Bse3DI GCAATG 4 cut(s) 674, 1116, 1615, 1762
BseAI TCCGGA 1 cut(s) 791
BseBI CCWGG 3 cut(s) 395, 1806, 1881
BseDI CCNNGG 6 cut(s) 1081, 1673, 1880, 1925, 1966, 2052
BseGI GGATG 7 cut(s) 670, 1197, 1441, 1636, 1712, 1825, 1861
BseLI CCNNNNNNNGG 2 cut(s) 791, 2240
BseMI GCAATG 4 cut(s) 674, 1116, 1615, 1762
BseNI ACTGG 5 cut(s) 75, 106, 420, 1097, 1177
BseRI GAGGAG 5 cut(s) 106, 361, 364, 717, 1435
BseXI GCAGC 3 cut(s) 235, 438, 1093
BseYI CCCAGC 1 cut(s) 51
BsgI GTGCAG 1 cut(s) 2296
BshFI GGCC 7 cut(s) 108, 543, 801, 1115, 1569, 1672, 1885
BshNI GGYRCC 1 cut(s) 2023
BsiHKAI GWGCWC 3 cut(s) 83, 225, 1236
BsiSI CCGG 3 cut(s) 239, 294, 792
BsiWI CGTACG 1 cut(s) 1561
BslFI GGGAC 1 cut(s) 1850
BslI CCNNNNNNNGG 2 cut(s) 791, 2240
BsmAI GTCTC 6 cut(s) 63, 497, 996, 1204, 1404, 1500
BsmFI GGGAC 1 cut(s) 1850
BsmI GAATGC 1 cut(s) 511
BsnI GGCC 7 cut(s) 108, 543, 801, 1115, 1569, 1672, 1885
Bso31I GGTCTC 1 cut(s) 497
Bsp1286I GDGCHC 3 cut(s) 83, 225, 1236
Bsp13I TCCGGA 1 cut(s) 791
Bsp1720I GCTNAGC 1 cut(s) 2034
BspACI CCGC 5 cut(s) 758, 1681, 1823, 2083, 2301
BspANI GGCC 7 cut(s) 108, 543, 801, 1115, 1569, 1672, 1885
BspEI TCCGGA 1 cut(s) 791
BspHI TCATGA 2 cut(s) 1416, 1479
BspLI GGNNCC 5 cut(s) 107, 198, 1679, 1827, 2025
BspMAI CTGCAG 4 cut(s) 889, 1526, 1621, 2118
BspMI ACCTGC 3 cut(s) 842, 878, 1054
BspOI GCTAGC 1 cut(s) 1542
BspPI GGATC 6 cut(s) 191, 204, 783, 1088, 1568, 1796
BspT107I GGYRCC 1 cut(s) 2023
BspTNI GGTCTC 1 cut(s) 497
BsrBI CCGCTC 1 cut(s) 1683
BsrDI GCAATG 4 cut(s) 674, 1116, 1615, 1762
BsrI ACTGG 5 cut(s) 75, 106, 420, 1097, 1177
BssECI CCNNGG 6 cut(s) 1081, 1673, 1880, 1925, 1966, 2052
BssNI GRCGYC 2 cut(s) 47, 2024
BssT1I CCWWGG 4 cut(s) 1081, 1673, 1925, 2052
Bst2UI CCWGG 3 cut(s) 395, 1806, 1881
Bst4CI ACNGT 8 cut(s) 32, 508, 916, 1078, 1198, 1841, 2002, 2274
Bst6I CTCTTC 3 cut(s) 2, 603, 1272
BstACI GRCGYC 2 cut(s) 47, 2024
BstAPI GCANNNNNTGC 1 cut(s) 893
BstBAI YACGTR 3 cut(s) 1561, 1565, 2146
BstC8I GCNNGC 7 cut(s) 409, 413, 665, 696, 849, 1540, 1993
BstF5I GGATG 7 cut(s) 670, 1197, 1441, 1636, 1712, 1825, 1861
BstH2I RGCGCY 2 cut(s) 1258, 2027
BstHHI GCGC 2 cut(s) 1257, 2026
BstMAI GTCTC 6 cut(s) 63, 497, 996, 1204, 1404, 1500
BstMWI GCNNNNNNNGC 6 cut(s) 248, 766, 893, 1112, 2030, 2089
BstNI CCWGG 3 cut(s) 395, 1806, 1881
BstNSI RCATGY 2 cut(s) 451, 1396
BstSCI CCNGG 3 cut(s) 393, 1804, 1879
BstSFI CTRYAG 5 cut(s) 885, 1140, 1522, 1617, 2114
BstSNI TACGTA 1 cut(s) 1561
BstV1I GCAGC 3 cut(s) 235, 438, 1093
BstV2I GAAGAC 3 cut(s) 121, 280, 577
BstX2I RGATCY 4 cut(s) 196, 1093, 1573, 1742
BstYI RGATCY 4 cut(s) 196, 1093, 1573, 1742
BsuI GTATCC 1 cut(s) 1507
BsuRI GGCC 7 cut(s) 108, 543, 801, 1115, 1569, 1672, 1885
BtrI CACGTC 2 cut(s) 797, 2314
BtsCI GGATG 7 cut(s) 670, 1197, 1441, 1636, 1712, 1825, 1861
BtsI GCAGTG 2 cut(s) 653, 2135
BtsIMutI CAGTG 7 cut(s) 189, 626, 653, 1846, 2135, 2175, 2279
BveI ACCTGC 3 cut(s) 842, 878, 1054
Cac8I GCNNGC 7 cut(s) 409, 413, 665, 696, 849, 1540, 1993
CaiI CAGNNNCTG 1 cut(s) 1103
CciI TCATGA 2 cut(s) 1416, 1479
CfoI GCGC 2 cut(s) 1257, 2026
Cfr13I GGNCC 5 cut(s) 106, 1262, 1677, 1808, 1883
CseI GACGC 1 cut(s) 55
Csp6I GTAC 4 cut(s) 481, 1315, 1558, 1562
CviQI GTAC 4 cut(s) 481, 1315, 1558, 1562
DinI GGCGCC 1 cut(s) 2025
DraI TTTAAA 1 cut(s) 1347
DrdI GACNNNNNNGTC 1 cut(s) 2286
DseDI GACNNNNNNGTC 1 cut(s) 2286
EaeI YGGCCR 3 cut(s) 799, 1113, 1670
Eam1104I CTCTTC 3 cut(s) 2, 603, 1272
EarI CTCTTC 3 cut(s) 2, 603, 1272
EciI GGCGGA 1 cut(s) 747
Ecl136II GAGCTC 1 cut(s) 1234
Eco105I TACGTA 1 cut(s) 1561
Eco130I CCWWGG 4 cut(s) 1081, 1673, 1925, 2052
Eco24I GRGCYC 1 cut(s) 1236
Eco31I GGTCTC 1 cut(s) 497
Eco47I GGWCC 3 cut(s) 1262, 1677, 1808
Eco47III AGCGCT 1 cut(s) 1256
Eco53kI GAGCTC 1 cut(s) 1234
Eco57I CTGAAG 1 cut(s) 687
EcoICRI GAGCTC 1 cut(s) 1234
EcoO109I RGGNCCY 1 cut(s) 1677
EcoRII CCWGG 3 cut(s) 393, 1804, 1879
EcoT14I CCWWGG 4 cut(s) 1081, 1673, 1925, 2052
EcoT38I GRGCYC 1 cut(s) 1236
EgeI GGCGCC 1 cut(s) 2025
EheI GGCGCC 1 cut(s) 2025
ErhI CCWWGG 4 cut(s) 1081, 1673, 1925, 2052
FaqI GGGAC 1 cut(s) 1850
FauI CCCGC 2 cut(s) 1688, 2308
FbaI TGATCA 1 cut(s) 640
Fnu4HI GCNGC 3 cut(s) 249, 452, 1107
FokI GGATG 7 cut(s) 657, 1204, 1448, 1623, 1719, 1832, 1868
FriOI GRGCYC 1 cut(s) 1236
Fsp4HI GCNGC 3 cut(s) 249, 452, 1107
FspBI CTAG 7 cut(s) 600, 897, 1455, 1539, 1571, 1926, 2066
GlaI GCGC 2 cut(s) 1256, 2025
GluI GCNGC 3 cut(s) 249, 452, 1107
GsaI CCCAGC 1 cut(s) 55
GsuI CTGGAG 2 cut(s) 273, 1723
HaeII RGCGCY 2 cut(s) 1258, 2027
HaeIII GGCC 7 cut(s) 108, 543, 801, 1115, 1569, 1672, 1885
HapII CCGG 3 cut(s) 239, 294, 792
HgaI GACGC 1 cut(s) 55
HhaI GCGC 2 cut(s) 1257, 2026
Hin1I GRCGYC 2 cut(s) 47, 2024
Hin6I GCGC 2 cut(s) 1255, 2024
HinP1I GCGC 2 cut(s) 1255, 2024
HincII GTYRAC 3 cut(s) 919, 1390, 1656
HindII GTYRAC 3 cut(s) 919, 1390, 1656
HindIII AAGCTT 2 cut(s) 413, 845
HinfI GANTC 8 cut(s) 172, 588, 754, 942, 1165, 1441, 1472, 1483
HpaII CCGG 3 cut(s) 239, 294, 792
HphI GGTGA 3 cut(s) 283, 496, 971
Hpy166II GTNNAC 6 cut(s) 919, 992, 1390, 1656, 1844, 2126
Hpy8I GTNNAC 6 cut(s) 919, 992, 1390, 1656, 1844, 2126
Hpy99I CGWCG 2 cut(s) 49, 830
HpyAV CCTTC 7 cut(s) 226, 554, 1010, 1355, 1596, 1948, 2306
HpyCH4III ACNGT 8 cut(s) 32, 508, 916, 1078, 1198, 1841, 2002, 2274
HpyCH4IV ACGT 9 cut(s) 574, 796, 825, 881, 1356, 1560, 1564, 2145, 2313
HpyF10VI GCNNNNNNNGC 6 cut(s) 248, 766, 893, 1112, 2030, 2089
HpySE526I ACGT 9 cut(s) 574, 796, 825, 881, 1356, 1560, 1564, 2145, 2313
Hsp92I GRCGYC 2 cut(s) 47, 2024
HspAI GCGC 2 cut(s) 1255, 2024
KasI GGCGCC 1 cut(s) 2023
Kpn2I TCCGGA 1 cut(s) 791
Ksp22I TGATCA 1 cut(s) 640
LmnI GCTCC 5 cut(s) 86, 1231, 1605, 2067, 2297
Lsp1109I GCAGC 3 cut(s) 235, 438, 1093
LweI GCATC 4 cut(s) 343, 463, 1723, 1810
MaeI CTAG 7 cut(s) 600, 897, 1455, 1539, 1571, 1926, 2066
MaeII ACGT 9 cut(s) 574, 796, 825, 881, 1356, 1560, 1564, 2145, 2313
MaeIII GTNAC 3 cut(s) 40, 1612, 1948
MbiI CCGCTC 1 cut(s) 1683
MfeI CAATTG 3 cut(s) 123, 717, 1032
MflI RGATCY 4 cut(s) 196, 1093, 1573, 1742
MhlI GDGCHC 3 cut(s) 83, 225, 1236
MlsI TGGCCA 2 cut(s) 1115, 1672
MluNI TGGCCA 2 cut(s) 1115, 1672
Mly113I GGCGCC 1 cut(s) 2024
MlyI GAGTC 4 cut(s) 166, 763, 1466, 1477
MmeI TCCRAC 2 cut(s) 200, 288
Mox20I TGGCCA 2 cut(s) 1115, 1672
MroI TCCGGA 1 cut(s) 791
MroXI GAANNNNTTC 2 cut(s) 1632, 1920
MscI TGGCCA 2 cut(s) 1115, 1672
MslI CAYNNNNRTG 2 cut(s) 459, 2076
Msp20I TGGCCA 2 cut(s) 1115, 1672
MspI CCGG 3 cut(s) 239, 294, 792
MspR9I CCNGG 3 cut(s) 395, 1806, 1881
MunI CAATTG 3 cut(s) 123, 717, 1032
Mva1269I GAATGC 1 cut(s) 511
MvaI CCWGG 3 cut(s) 395, 1806, 1881
MwoI GCNNNNNNNGC 6 cut(s) 248, 766, 893, 1112, 2030, 2089
NarI GGCGCC 1 cut(s) 2024
NheI GCTAGC 1 cut(s) 1538
NlaIV GGNNCC 5 cut(s) 107, 198, 1679, 1827, 2025
NmeAIII GCCGAG 1 cut(s) 572
NspI RCATGY 2 cut(s) 451, 1396
PagI TCATGA 2 cut(s) 1416, 1479
PciI ACATGT 1 cut(s) 1392
PcsI WCGNNNNNNNCGW 2 cut(s) 571, 793
PctI GAATGC 1 cut(s) 511
PdmI GAANNNNTTC 2 cut(s) 1632, 1920
PfeI GAWTC 4 cut(s) 588, 942, 1165, 1441
Pfl23II CGTACG 1 cut(s) 1561
PkrI GCNGC 3 cut(s) 250, 453, 1108
PleI GAGTC 4 cut(s) 166, 762, 1466, 1477
PluTI GGCGCC 1 cut(s) 2027
PpsI GAGTC 4 cut(s) 166, 762, 1466, 1477
Ppu21I YACGTR 3 cut(s) 1561, 1565, 2146
PpuMI RGGWCCY 1 cut(s) 1677
PscI ACATGT 1 cut(s) 1392
PshBI ATTAAT 3 cut(s) 710, 737, 972
PsiI TTATAA 1 cut(s) 557
Psp124BI GAGCTC 1 cut(s) 1236
Psp5II RGGWCCY 1 cut(s) 1677
Psp6I CCWGG 3 cut(s) 393, 1804, 1879
PspFI CCCAGC 1 cut(s) 51
PspGI CCWGG 3 cut(s) 393, 1804, 1879
PspLI CGTACG 1 cut(s) 1561
PspN4I GGNNCC 5 cut(s) 107, 198, 1679, 1827, 2025
PspPI GGNCC 5 cut(s) 106, 1262, 1677, 1808, 1883
PspPPI RGGWCCY 1 cut(s) 1677
PstI CTGCAG 4 cut(s) 889, 1526, 1621, 2118
PstNI CAGNNNCTG 1 cut(s) 1103
PsuI RGATCY 4 cut(s) 196, 1093, 1573, 1742
RsaI GTAC 4 cut(s) 482, 1316, 1559, 1563
RsaNI GTAC 4 cut(s) 481, 1315, 1558, 1562
RseI CAYNNNNRTG 2 cut(s) 459, 2076
SacI GAGCTC 1 cut(s) 1236
SatI GCNGC 3 cut(s) 249, 452, 1107
Sau96I GGNCC 5 cut(s) 106, 1262, 1677, 1808, 1883
SchI GAGTC 4 cut(s) 166, 763, 1466, 1477
ScrFI CCNGG 3 cut(s) 395, 1806, 1881
SduI GDGCHC 3 cut(s) 83, 225, 1236
SfaNI GCATC 4 cut(s) 343, 463, 1723, 1810
SfcI CTRYAG 5 cut(s) 885, 1140, 1522, 1617, 2114
SfoI GGCGCC 1 cut(s) 2025
SinI GGWCC 3 cut(s) 1262, 1677, 1808
SmiMI CAYNNNNRTG 2 cut(s) 459, 2076
SmlI CTYRAG 1 cut(s) 2013
SmoI CTYRAG 1 cut(s) 2013
SnaBI TACGTA 1 cut(s) 1561
SsiI CCGC 5 cut(s) 758, 1681, 1823, 2083, 2301
SspDI GGCGCC 1 cut(s) 2023
SspMI CTAG 7 cut(s) 600, 897, 1455, 1539, 1571, 1926, 2066
SstI GAGCTC 1 cut(s) 1236
StyD4I CCNGG 3 cut(s) 393, 1804, 1879
StyI CCWWGG 4 cut(s) 1081, 1673, 1925, 2052
TaaI ACNGT 8 cut(s) 32, 508, 916, 1078, 1198, 1841, 2002, 2274
TaiI ACGT 9 cut(s) 577, 799, 828, 884, 1359, 1563, 1567, 2148, 2316
TaqI TCGA 5 cut(s) 219, 586, 1470, 1492, 1691
TatI WGTACW 1 cut(s) 1314
TfiI GAWTC 4 cut(s) 588, 942, 1165, 1441
TscAI CASTG 7 cut(s) 196, 626, 653, 1846, 2142, 2175, 2279
TseI GCWGC 3 cut(s) 248, 451, 1106
TspDTI ATGAA 7 cut(s) 273, 1053, 1338, 1625, 1947, 2060, 2095
TspGWI ACGGA 1 cut(s) 1448
TspRI CASTG 7 cut(s) 196, 626, 653, 1846, 2142, 2175, 2279
VpaK11BI GGWCC 3 cut(s) 1262, 1677, 1808
VspI ATTAAT 3 cut(s) 710, 737, 972
XapI RAATTY 2 cut(s) 1020, 1295
XceI RCATGY 2 cut(s) 451, 1396
XcmI CCANNNNNNNNNTGG 3 cut(s) 1256, 1812, 2207
XmaJI CCTAGG 1 cut(s) 1925
XmnI GAANNNNTTC 2 cut(s) 1632, 1920
XspI CTAG 7 cut(s) 600, 897, 1455, 1539, 1571, 1926, 2066
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.