Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr13

Orthogroup ID

OG0008516

Physical Location & Seq

Genomic Coordinates Forward (+)

1272157 .. 1275485

Gene Structure 3329 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD13G1020200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1119 bp

ATGTCATCGGAATCGTCAACTACGGCGGCGGCGGCGGCGCCCGAGTCACGTGCGCCGCTTCTTCTCCCCCGCCAGGGGAGCAACGGCCGGGACTCGTCCGACCTCGGCTCCCCGACCGCCCGGACCGGCACGCTGGCGATGCTGCTGGGACGGGCCACCGGGCGCAGGGGGGCGTCGATGCTGGTGCGGGAGACGGCGGCGCGGGAGCTGGACGAGCGGCGAGCCGACTGGGGGTACTCGAAGCCGGTGGTGGCTCTGGACATGATGTGGAACACGGCGTTCGTGGTGGTGTCGGTGGTGATGCTGATATGGACGGAGGACGAGCGCCCGAACACGCCGATCCGGCTGTGGATCTACGGGTATGCGCTCCAGTGTTTTGCACACGTGGTGCTGGTGTGGGTGGAGTACCGGAGGAGGAATAATATTGCTTGGAGGCTTAGTAGGAGAAACCAGGAGGCCCAGCAGGAGGAGCACCAGGTGGATATCGATGCTGTCGATACCGACGATGAAGAAGCAGCTAGGGAATTGGCGACTTCCACTCGCTCCAGTGTCTCTAAACGACTTGAAACGATGAATACAATGGCATCATTTCTCTGGTGGATAGTTGGCTTCTATTGGGTAGTTTCTGGGGGTGAAGTTCTTCTGCAAAATGCTCCGCGTTTGTACTGGTTGGCTGTGGTTTTTCTGGCATTTGATGTCTTCTTTGCCATCTTTTGTGTTGTCCTGGCATGTTTGATTGGAGTTGCTCTTTGTTGCTGTTTGCCATGCATCATTGCAATTCTTTACACCGTTGCAGGACAGGAAGGTGCATCCGAAGCAGATCTCACTATTCTGCCAAAATACTGGTTTCGAGCGAACAGTGAGGAAAAACCTAGTGTTGGAGCAGGGAAAATGATTCCGGCAGAAACAAGCAGCGGGTACCTAGCAGTTGAGCGTGTTCTTTTACCTGAGGATGCGGAATGTTGTATATGTCTCAGCCCGTATGAGGATGGGGCAGAGCTTCATACGCTTCCCTGTAATCATCATTTCCACGCTACGTGCATTGTGAAATGGCTTAAAATGAATGCAACATGTCCTCTCTGCAAGTACAACATTCTCAAGGGAAATGATCCGGTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004842 GO:0006464 GO:0006508 GO:0006511 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010154 GO:0010498 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0019941 GO:0022414 GO:0030163 GO:0032446 GO:0032501 GO:0032502 GO:0036211 GO:0043161 GO:0043170 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0051603 GO:0061458 GO:0061630 GO:0061659 GO:0070647 GO:0071704 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-RING_2

Protein Analysis

373

Amino Acids

41.38

Weight (kDa)

5.4

Isoelectric Point (pI)

48.47

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-rbx1	PF12678	319 - 362	8.1e-09	RING-H2 zinc finger domain
zf-RING_2	PF13639	320 - 362	4.8e-15	Ring finger domain
zf-RING_11	PF17123	320 - 348	5.6e-09	RING-like zinc finger
zf-C3HC4_2	PF13923	320 - 361	1.2e-06	Zinc finger, C3HC4 type (RING finger)
zf-C3HC4	PF00097	321 - 361	2.5e-06	Zinc finger, C3HC4 type (RING finger)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008516)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G68070 AT2G01735 AT2G01735
fragaria_vesca	FvH4_4g33530 FvH4_5g19942 FvH4_6g33182
malus_domestica	MD13G1020200.v1.1 MD16G1018400.v1.1
prunus_persica	Prupe.1G333500_v2.0.a1 Prupe.1G333500_v2.0.a1
pyrus_communis	pycom16g01680
rosa_chinensis	RchiOBHm_Chr4g0443041
rosa_laevigata	RLG00000005960
rosa_multiflora	Rmu_co8232139.1_g000001 Rmu_sc0008055.1_g000003 Rmu_sc0015292.1_g000001
rosa_roxburghii	Rroxscaffold_5G00383670
rosa_rugosa	Rorug04G0344000
rosa_samantha	Rh4AG398200 Rh4BG409700 Rh4CG425200 Rh4DG404500
rosa_wichuraiana	Rw4G034310

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	918
AccB1I	GGYRCC	2 cut(s)	37, 918
AccBSI	CCGCTC	1 cut(s)	217
AccII	CGCG	2 cut(s)	202, 658
AclWI	GGATC	3 cut(s)	334, 359, 1103
AcoI	YGGCCR	1 cut(s)	85
AcvI	CACGTG	2 cut(s)	50, 385
AcyI	GRCGYC	2 cut(s)	38, 173
AdeI	CACNNNGTG	2 cut(s)	388, 478
AfaI	GTAC	5 cut(s)	236, 407, 665, 920, 1088
AfiI	CCNNNNNNNGG	8 cut(s)	73, 74, 75, 165, 231, 466, 878, 985
AflIII	ACRYGT	2 cut(s)	382, 1070
AgsI	TTSAA	1 cut(s)	566
AjnI	CCWGG	4 cut(s)	72, 450, 474, 723
AluBI	AGCT	3 cut(s)	208, 518, 1000
AluI	AGCT	3 cut(s)	208, 518, 1000
Alw21I	GWGCWC	1 cut(s)	474
Alw26I	GTCTC	3 cut(s)	185, 556, 977
AlwI	GGATC	3 cut(s)	334, 359, 1103
Ama87I	CYCGRG	1 cut(s)	41
AoxI	GGCC	3 cut(s)	85, 153, 456
ApeKI	GCWGC	3 cut(s)	142, 515, 912
Asp700I	GAANNNNTTC	1 cut(s)	639
Asp718I	GGTACC	1 cut(s)	918
AspLEI	GCGC	6 cut(s)	40, 55, 165, 202, 327, 367
AspS9I	GGNCC	3 cut(s)	123, 153, 457
AsuC2I	CCSGG	3 cut(s)	89, 121, 160
AsuHPI	GGTGA	2 cut(s)	310, 644
AvaI	CYCGRG	1 cut(s)	41
AvaII	GGWCC	1 cut(s)	123
AxyI	CCTNAGG	1 cut(s)	948
BanI	GGYRCC	2 cut(s)	37, 918
BbrPI	CACGTG	2 cut(s)	50, 385
BbsI	GAAGAC	1 cut(s)	691
Bbv12I	GWGCWC	1 cut(s)	474
BbvI	GCAGC	3 cut(s)	129, 527, 924
BccI	CCATC	2 cut(s)	716, 983
BceAI	ACGGC	4 cut(s)	39, 100, 210, 291
BcgI	CGANNNNNNTGC	4 cut(s)	32, 66, 166, 200
BciT130I	CCWGG	4 cut(s)	74, 452, 476, 725
BcnI	CCSGG	3 cut(s)	89, 121, 160
BcoDI	GTCTC	3 cut(s)	185, 556, 977
BfaI	CTAG	3 cut(s)	519, 873, 923
BfoI	RGCGCY	2 cut(s)	41, 328
BglI	GCCNNNNNGGC	1 cut(s)	343
BglII	AGATCT	1 cut(s)	820
Bme1390I	CCNGG	7 cut(s)	74, 89, 121, 160, 452, 476, 725
Bme18I	GGWCC	1 cut(s)	123
BmeT110I	CYCGRG	1 cut(s)	41
BmgT120I	GGNCC	3 cut(s)	123, 153, 457
BmiI	GGNNCC	3 cut(s)	39, 109, 920
BmrFI	CCNGG	7 cut(s)	74, 89, 121, 160, 452, 476, 725
BmrI	ACTGGG	1 cut(s)	238
BmsI	GCATC	8 cut(s)	129, 168, 291, 478, 593, 777, 818, 943
BmuI	ACTGGG	1 cut(s)	238
BpiI	GAAGAC	1 cut(s)	691
BpmI	CTGGAG	2 cut(s)	353, 529
BpuEI	CTTGAG	1 cut(s)	1082
BpuMI	CCSGG	3 cut(s)	89, 121, 160
Bsa29I	ATCGAT	1 cut(s)	486
BsaAI	YACGTR	3 cut(s)	50, 385, 1038
BsaHI	GRCGYC	2 cut(s)	38, 173
BsaJI	CCNNGG	2 cut(s)	73, 103
BsaWI	WCCGGW	2 cut(s)	408, 1111
BsaXI	ACNNNNNCTCC	4 cut(s)	92, 122, 424, 454
Bsc4I	CCNNNNNNNGG	8 cut(s)	73, 74, 75, 165, 231, 466, 878, 985
Bse118I	RCCGGY	2 cut(s)	125, 244
Bse1I	ACTGG	5 cut(s)	233, 370, 546, 671, 848
Bse21I	CCTNAGG	1 cut(s)	948
Bse3DI	GCAATG	1 cut(s)	771
BseBI	CCWGG	4 cut(s)	74, 452, 476, 725
BseCI	ATCGAT	1 cut(s)	486
BseDI	CCNNGG	2 cut(s)	73, 103
BseGI	GGATG	3 cut(s)	809, 958, 994
BseLI	CCNNNNNNNGG	8 cut(s)	73, 74, 75, 165, 231, 466, 878, 985
BseMI	GCAATG	1 cut(s)	771
BseMII	CTCAG	2 cut(s)	939, 988
BseNI	ACTGG	5 cut(s)	233, 370, 546, 671, 848
BseRI	GAGGAG	2 cut(s)	427, 482
BseX3I	CGGCCG	1 cut(s)	85
BseXI	GCAGC	3 cut(s)	129, 527, 924
BseYI	CCCAGC	2 cut(s)	145, 459
Bsh1236I	CGCG	2 cut(s)	202, 658
Bsh1285I	CGRYCG	2 cut(s)	88, 117
BshFI	GGCC	3 cut(s)	87, 155, 458
BshNI	GGYRCC	2 cut(s)	37, 918
BshVI	ATCGAT	1 cut(s)	486
BsiEI	CGRYCG	2 cut(s)	88, 117
BsiHKAI	GWGCWC	1 cut(s)	474
BsiHKCI	CYCGRG	1 cut(s)	41
BsiSI	CCGG	9 cut(s)	88, 121, 126, 159, 245, 343, 409, 899, 1112
BslFI	GGGAC	2 cut(s)	104, 162
BslI	CCNNNNNNNGG	8 cut(s)	73, 74, 75, 165, 231, 466, 878, 985
BsmAI	GTCTC	3 cut(s)	185, 556, 977
BsmBI	CGTCTC	1 cut(s)	185
BsmFI	GGGAC	2 cut(s)	104, 162
BsmI	GAATGC	1 cut(s)	1069
BsnI	GGCC	3 cut(s)	87, 155, 458
BsoBI	CYCGRG	1 cut(s)	41
Bsp1286I	GDGCHC	1 cut(s)	474
Bsp143I	GATC	4 cut(s)	339, 351, 820, 1108
BspANI	GGCC	3 cut(s)	87, 155, 458
BspCNI	CTCAG	2 cut(s)	940, 987
BspDI	ATCGAT	1 cut(s)	486
BspFNI	CGCG	2 cut(s)	202, 658
BspLI	GGNNCC	3 cut(s)	39, 109, 920
BspPI	GGATC	3 cut(s)	334, 359, 1103
BspT107I	GGYRCC	2 cut(s)	37, 918
BsrBI	CCGCTC	1 cut(s)	217
BsrDI	GCAATG	1 cut(s)	771
BsrFI	RCCGGY	2 cut(s)	125, 244
BsrI	ACTGG	5 cut(s)	233, 370, 546, 671, 848
BssAI	RCCGGY	2 cut(s)	125, 244
BssECI	CCNNGG	2 cut(s)	73, 103
BssMI	GATC	4 cut(s)	339, 351, 820, 1108
BssNI	GRCGYC	2 cut(s)	38, 173
Bst2UI	CCWGG	4 cut(s)	74, 452, 476, 725
Bst4CI	ACNGT	2 cut(s)	790, 860
BstACI	GRCGYC	2 cut(s)	38, 173
BstBAI	YACGTR	3 cut(s)	50, 385, 1038
BstC8I	GCNNGC	3 cut(s)	131, 135, 222
BstDEI	CTNAG	3 cut(s)	437, 948, 974
BstF5I	GGATG	3 cut(s)	809, 958, 994
BstFNI	CGCG	2 cut(s)	202, 658
BstH2I	RGCGCY	2 cut(s)	41, 328
BstHHI	GCGC	6 cut(s)	40, 55, 165, 202, 327, 367
BstKTI	GATC	4 cut(s)	342, 354, 823, 1111
BstMAI	GTCTC	3 cut(s)	185, 556, 977
BstMBI	GATC	4 cut(s)	339, 351, 820, 1108
BstMCI	CGRYCG	2 cut(s)	88, 117
BstMWI	GCNNNNNNNGC	9 cut(s)	32, 35, 78, 139, 214, 343, 469, 815, 1006
BstNI	CCWGG	4 cut(s)	74, 452, 476, 725
BstNSI	RCATGY	2 cut(s)	732, 1074
BstSCI	CCNGG	7 cut(s)	72, 87, 119, 158, 450, 474, 723
BstUI	CGCG	2 cut(s)	202, 658
BstV1I	GCAGC	3 cut(s)	129, 527, 924
BstV2I	GAAGAC	1 cut(s)	691
BstX2I	RGATCY	2 cut(s)	351, 820
BstXI	CCANNNNNNTGG	1 cut(s)	843
BstYI	RGATCY	2 cut(s)	351, 820
BstZI	CGGCCG	1 cut(s)	85
Bsu15I	ATCGAT	1 cut(s)	486
Bsu36I	CCTNAGG	1 cut(s)	948
BsuRI	GGCC	3 cut(s)	87, 155, 458
BsuTUI	ATCGAT	1 cut(s)	486
BtgZI	GCGATG	1 cut(s)	152
BtsCI	GGATG	3 cut(s)	809, 958, 994
BtsIMutI	CAGTG	3 cut(s)	377, 553, 865
Cac8I	GCNNGC	3 cut(s)	131, 135, 222
CfoI	GCGC	6 cut(s)	40, 55, 165, 202, 327, 367
Cfr10I	RCCGGY	2 cut(s)	125, 244
Cfr13I	GGNCC	3 cut(s)	123, 153, 457
ClaI	ATCGAT	1 cut(s)	486
CpoI	CGGWCCG	1 cut(s)	123
CseI	GACGC	1 cut(s)	162
CsiI	ACCWGGT	1 cut(s)	474
Csp6I	GTAC	5 cut(s)	235, 406, 664, 919, 1087
CspI	CGGWCCG	1 cut(s)	123
CviAII	CATG	4 cut(s)	262, 729, 765, 1071
CviQI	GTAC	5 cut(s)	235, 406, 664, 919, 1087
DdeI	CTNAG	3 cut(s)	437, 948, 974
DinI	GGCGCC	1 cut(s)	39
DpnI	GATC	4 cut(s)	341, 353, 822, 1110
DpnII	GATC	4 cut(s)	339, 351, 820, 1108
DraIII	CACNNNGTG	2 cut(s)	388, 478
EaeI	YGGCCR	1 cut(s)	85
EagI	CGGCCG	1 cut(s)	85
EclXI	CGGCCG	1 cut(s)	85
Eco32I	GATATC	1 cut(s)	484
Eco47I	GGWCC	1 cut(s)	123
Eco52I	CGGCCG	1 cut(s)	85
Eco72I	CACGTG	2 cut(s)	50, 385
Eco81I	CCTNAGG	1 cut(s)	948
Eco88I	CYCGRG	1 cut(s)	41
EcoRII	CCWGG	4 cut(s)	72, 450, 474, 723
EcoRV	GATATC	1 cut(s)	484
EcoT22I	ATGCAT	1 cut(s)	770
EgeI	GGCGCC	1 cut(s)	39
EheI	GGCGCC	1 cut(s)	39
Esp3I	CGTCTC	1 cut(s)	185
FaeI	CATG	4 cut(s)	265, 732, 768, 1074
FaqI	GGGAC	2 cut(s)	104, 162
FatI	CATG	4 cut(s)	261, 728, 764, 1070
FauI	CCCGC	4 cut(s)	77, 180, 195, 908
FokI	GGATG	3 cut(s)	796, 965, 1001
FspBI	CTAG	3 cut(s)	519, 873, 923
GlaI	GCGC	6 cut(s)	39, 54, 164, 201, 326, 366
GsaI	CCCAGC	2 cut(s)	149, 463
GsuI	CTGGAG	2 cut(s)	353, 529
HaeII	RGCGCY	2 cut(s)	41, 328
HaeIII	GGCC	3 cut(s)	87, 155, 458
HapII	CCGG	9 cut(s)	88, 121, 126, 159, 245, 343, 409, 899, 1112
HgaI	GACGC	1 cut(s)	162
HhaI	GCGC	6 cut(s)	40, 55, 165, 202, 327, 367
Hin1I	GRCGYC	2 cut(s)	38, 173
Hin1II	CATG	4 cut(s)	265, 732, 768, 1074
Hin6I	GCGC	6 cut(s)	38, 53, 163, 200, 325, 365
HinP1I	GCGC	6 cut(s)	38, 53, 163, 200, 325, 365
HincII	GTYRAC	1 cut(s)	18
HindII	GTYRAC	1 cut(s)	18
HinfI	GANTC	4 cut(s)	11, 44, 92, 895
HpaII	CCGG	9 cut(s)	88, 121, 126, 159, 245, 343, 409, 899, 1112
HphI	GGTGA	2 cut(s)	310, 644
Hpy166II	GTNNAC	1 cut(s)	18
Hpy188I	TCNGA	3 cut(s)	10, 100, 814
Hpy188III	TCNNGA	1 cut(s)	257
Hpy8I	GTNNAC	1 cut(s)	18
Hpy99I	CGWCG	2 cut(s)	178, 506
HpyAV	CCTTC	1 cut(s)	797
HpyCH4III	ACNGT	2 cut(s)	790, 860
HpyCH4IV	ACGT	3 cut(s)	49, 384, 1037
HpyCH4V	TGCA	9 cut(s)	380, 646, 768, 776, 794, 809, 1041, 1067, 1083
HpyF10VI	GCNNNNNNNGC	9 cut(s)	32, 35, 78, 139, 214, 343, 469, 815, 1006
HpyF3I	CTNAG	3 cut(s)	437, 948, 974
HpySE526I	ACGT	3 cut(s)	49, 384, 1037
Hsp92I	GRCGYC	2 cut(s)	38, 173
Hsp92II	CATG	4 cut(s)	265, 732, 768, 1074
HspAI	GCGC	6 cut(s)	38, 53, 163, 200, 325, 365
KasI	GGCGCC	1 cut(s)	37
KpnI	GGTACC	1 cut(s)	922
Kzo9I	GATC	4 cut(s)	339, 351, 820, 1108
LmnI	GCTCC	8 cut(s)	78, 113, 205, 372, 469, 548, 658, 881
Lsp1109I	GCAGC	3 cut(s)	129, 527, 924
LweI	GCATC	8 cut(s)	129, 168, 291, 478, 593, 777, 818, 943
MabI	ACCWGGT	1 cut(s)	474
MaeI	CTAG	3 cut(s)	519, 873, 923
MaeII	ACGT	3 cut(s)	49, 384, 1037
MaeIII	GTNAC	1 cut(s)	45
MalI	GATC	4 cut(s)	341, 353, 822, 1110
MbiI	CCGCTC	1 cut(s)	217
MboI	GATC	4 cut(s)	339, 351, 820, 1108
MboII	GAAGA	4 cut(s)	53, 521, 632, 691
MflI	RGATCY	2 cut(s)	351, 820
MhlI	GDGCHC	1 cut(s)	474
MluCI	AATT	2 cut(s)	524, 777
Mly113I	GGCGCC	1 cut(s)	38
MlyI	GAGTC	2 cut(s)	53, 86
MmeI	TCCRAC	2 cut(s)	123, 859
Mph1103I	ATGCAT	1 cut(s)	770
MroXI	GAANNNNTTC	1 cut(s)	639
MseI	TTAA	2 cut(s)	1056, 1117
MspA1I	CMGCKG	1 cut(s)	915
MspI	CCGG	9 cut(s)	88, 121, 126, 159, 245, 343, 409, 899, 1112
MspR9I	CCNGG	7 cut(s)	74, 89, 121, 160, 452, 476, 725
Mva1269I	GAATGC	1 cut(s)	1069
MvaI	CCWGG	4 cut(s)	74, 452, 476, 725
MvnI	CGCG	2 cut(s)	202, 658
MwoI	GCNNNNNNNGC	9 cut(s)	32, 35, 78, 139, 214, 343, 469, 815, 1006
NarI	GGCGCC	1 cut(s)	38
NciI	CCSGG	3 cut(s)	89, 121, 160
NdeII	GATC	4 cut(s)	339, 351, 820, 1108
NlaIII	CATG	4 cut(s)	265, 732, 768, 1074
NlaIV	GGNNCC	3 cut(s)	39, 109, 920
NmeAIII	GCCGAG	1 cut(s)	84
NmuCI	GTSAC	1 cut(s)	45
NsiI	ATGCAT	1 cut(s)	770
NspI	RCATGY	2 cut(s)	732, 1074
PciI	ACATGT	1 cut(s)	1070
PcsI	WCGNNNNNNNCGW	2 cut(s)	492, 501
PctI	GAATGC	1 cut(s)	1069
PdmI	GAANNNNTTC	1 cut(s)	639
PfeI	GAWTC	2 cut(s)	11, 895
PleI	GAGTC	2 cut(s)	52, 86
PluTI	GGCGCC	1 cut(s)	41
PmaCI	CACGTG	2 cut(s)	50, 385
PmlI	CACGTG	2 cut(s)	50, 385
PpsI	GAGTC	2 cut(s)	52, 86
Ppu21I	YACGTR	3 cut(s)	50, 385, 1038
PscI	ACATGT	1 cut(s)	1070
Psp6I	CCWGG	4 cut(s)	72, 450, 474, 723
PspCI	CACGTG	2 cut(s)	50, 385
PspFI	CCCAGC	2 cut(s)	145, 459
PspGI	CCWGG	4 cut(s)	72, 450, 474, 723
PspN4I	GGNNCC	3 cut(s)	39, 109, 920
PspPI	GGNCC	3 cut(s)	123, 153, 457
PsuI	RGATCY	2 cut(s)	351, 820
RsaI	GTAC	5 cut(s)	236, 407, 665, 920, 1088
RsaNI	GTAC	5 cut(s)	235, 406, 664, 919, 1087
Rsr2I	CGGWCCG	1 cut(s)	123
RsrII	CGGWCCG	1 cut(s)	123
SaqAI	TTAA	2 cut(s)	1056, 1117
Sau3AI	GATC	4 cut(s)	339, 351, 820, 1108
Sau96I	GGNCC	3 cut(s)	123, 153, 457
SchI	GAGTC	2 cut(s)	53, 86
ScrFI	CCNGG	7 cut(s)	74, 89, 121, 160, 452, 476, 725
SduI	GDGCHC	1 cut(s)	474
SexAI	ACCWGGT	1 cut(s)	474
SfaNI	GCATC	8 cut(s)	129, 168, 291, 478, 593, 777, 818, 943
SfoI	GGCGCC	1 cut(s)	39
SinI	GGWCC	1 cut(s)	123
SmlI	CTYRAG	1 cut(s)	1097
SmoI	CTYRAG	1 cut(s)	1097
Sse9I	AATT	2 cut(s)	524, 777
SspDI	GGCGCC	1 cut(s)	37
SspI	AATATT	1 cut(s)	424
SspMI	CTAG	3 cut(s)	519, 873, 923
StyD4I	CCNGG	7 cut(s)	72, 87, 119, 158, 450, 474, 723
TaaI	ACNGT	2 cut(s)	790, 860
TaiI	ACGT	3 cut(s)	52, 387, 1040
TaqI	TCGA	5 cut(s)	176, 239, 486, 495, 850
TasI	AATT	2 cut(s)	524, 777
TatI	WGTACW	2 cut(s)	663, 1086
TauI	GCSGC	7 cut(s)	29, 32, 35, 38, 58, 200, 220
TfiI	GAWTC	2 cut(s)	11, 895
Tru1I	TTAA	2 cut(s)	1056, 1117
Tru9I	TTAA	2 cut(s)	1056, 1117
TscAI	CASTG	3 cut(s)	377, 553, 865
TseFI	GTSAC	1 cut(s)	45
TseI	GCWGC	3 cut(s)	142, 515, 912
Tsp45I	GTSAC	1 cut(s)	45
TspDTI	ATGAA	4 cut(s)	522, 587, 992, 1076
TspGWI	ACGGA	1 cut(s)	329
TspRI	CASTG	3 cut(s)	377, 553, 865
VpaK11BI	GGWCC	1 cut(s)	123
XceI	RCATGY	2 cut(s)	732, 1074
XmnI	GAANNNNTTC	1 cut(s)	639
XspI	CTAG	3 cut(s)	519, 873, 923
Zsp2I	ATGCAT	1 cut(s)	770

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.