RchiOBHm_Chr4g0443041

Cleavage and polyadenylation specificity factor subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
OG0008516
Physical Location & Seq
Forward (+)
64380871 .. 64384417
3547 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ41076

Sequence Viewer

Length: 1104 bp
ATGTCATCGGGCTCTTCAGCTACGGCGGCGACGGAGACGTCGACCGAGTCACGCGCGCCGCTTCTGCTTCCCCGGCAGGGGAGCGACGGCCGTGACTTGTCGGAGCTCGGCTCCCCGACCCGCCCGGCCACGCTGGCCATGCTGCTGGGCCGGGCCACGGGCCGGCGCGGGCCGTCCATGCTGGTGAGGGAGACGGCGGCGCGTGAGCTGGACGAGCGGCGCGCCGACTGGGGGTACTCGAAGCCGGTGGTGGCGCTGGACATGATGTGGAACACGGCCTTCGTGCTGGTCTCGGTGGTGATGCTGATTCTGACGCGAGACGAGAACCCGAACACGCCGATCCGGCTCTGGATCTGCGGCTACGCGCTGCAGTGCTTTGTCCACGTGGCGCTGGTGTGGATTGAGTACCGGAGGAGGAATACGAGGAGAGGGAGGAGAGGGCCGGAGGTGCAGCAGACCTCCGAAGCTGCCGAGGCTAATGATACTGATGATGATGAAACAGCTACGGATTTGGGGGCTCCGAGTCGTTCCAGTTTCTCTAAACGATGTGAATCAGTCAATACAATGGCATCCTTTCTCTGGTGGATAGTTGGCTTTTATTGGGTAGTCTCCGGTGGTGATTTGCTCCTGCAAAATGCTCCGCGTTTGTACTGGTTGTCTGTGGTTTTCCTGGCATTTGACGTCTTCTTTGCCATCTTTTGTGTTGTTCTGGCATGTTTGATCGGAATTGCTCTTTGTTGCTGTTTGCCATGCATCATTGCAATTCTATATGCTGTGGCAGGACAGGAAGGTGCATCCGAAGCAGATCTCAGTGTTCTTCCAAAATACAAATTTAGAATATCAGGCGATGAAAAATCTAGTGTAGGAGCAGGGAAAATGATTCCAATGGAATCAACCAGTGGGTACCTGGCAGTCGAGCGTATTCTTTTACCCGAGGATGCGGAATGTTGTATATGTCTCAGCCAATATGAGGATGGGGCAGATCTTCACACTCTTCCCTGTAACCATCACTTCCATGCTAATTGCATTGTGAAATGGCTTAAAATGAATGCAACATGTCCTCTCTGCAAATACAATATTCTCAAGGGAAGCGAACAGGTTTAA

Protein Analysis

367

Amino Acids

40.47

Weight (kDa)

5.67

Isoelectric Point (pI)

50.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-RING_2 PF13639 315 - 357 3.6e-15 Ring finger domain
zf-RING_11 PF17123 315 - 343 8.2e-09 RING-like zinc finger
zf-rbx1 PF12678 315 - 357 1.1e-08 RING-H2 zinc finger domain
zf-C3HC4_2 PF13923 315 - 356 1.8e-07 Zinc finger, C3HC4 type (RING finger)
zf-C3HC4 PF00097 316 - 356 1.3e-06 Zinc finger, C3HC4 type (RING finger)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 37
AatII GACGTC 2 cut(s) 41, 684
Acc65I GGTACC 1 cut(s) 903
AccB1I GGYRCC 1 cut(s) 903
AccBSI CCGCTC 1 cut(s) 217
AccI GTMKAC 1 cut(s) 41
AccII CGCG 8 cut(s) 54, 56, 168, 202, 222, 316, 365, 643
AciI CCGC 9 cut(s) 26, 59, 121, 168, 197, 217, 357, 641, 941
AclWI GGATC 2 cut(s) 334, 359
AcoI YGGCCR 3 cut(s) 88, 126, 135
AcsI RAATTY 1 cut(s) 830
AcvI CACGTG 1 cut(s) 385
AcyI GRCGYC 2 cut(s) 38, 681
AfaI GTAC 4 cut(s) 236, 407, 650, 905
AfiI CCNNNNNNNGG 7 cut(s) 77, 78, 157, 162, 231, 579, 970
AflIII ACRYGT 1 cut(s) 1055
AjnI CCWGG 2 cut(s) 669, 906
AluBI AGCT 5 cut(s) 20, 106, 208, 467, 503
AluI AGCT 5 cut(s) 20, 106, 208, 467, 503
Alw21I GWGCWC 1 cut(s) 108
Alw26I GTCTC 6 cut(s) 29, 185, 295, 312, 613, 962
AlwI GGATC 2 cut(s) 334, 359
Ama87I CYCGRG 1 cut(s) 932
AoxI GGCC 9 cut(s) 88, 126, 135, 148, 153, 160, 170, 276, 440
ApeKI GCWGC 4 cut(s) 142, 367, 451, 467
ApoI RAATTY 1 cut(s) 830
ArsI GACNNNNNNTTYG 2 cut(s) 671, 703
AscI GGCGCGCC 1 cut(s) 220
Asp718I GGTACC 1 cut(s) 903
AspLEI GCGC 9 cut(s) 56, 58, 168, 202, 222, 224, 256, 367, 391
AspS9I GGNCC 5 cut(s) 148, 153, 160, 170, 440
AsuC2I CCSGG 3 cut(s) 73, 125, 152
AsuHPI GGTGA 3 cut(s) 196, 310, 629
AvaI CYCGRG 1 cut(s) 932
BalI TGGCCA 1 cut(s) 137
BanI GGYRCC 1 cut(s) 903
BanII GRGCYC 3 cut(s) 14, 108, 520
BbrPI CACGTG 1 cut(s) 385
BbsI GAAGAC 1 cut(s) 676
Bbv12I GWGCWC 1 cut(s) 108
BbvI GCAGC 4 cut(s) 129, 354, 454, 463
BccI CCATC 3 cut(s) 701, 968, 1014
BceAI ACGGC 6 cut(s) 39, 75, 103, 157, 210, 291
BciT130I CCWGG 2 cut(s) 671, 908
BcnI CCSGG 3 cut(s) 73, 125, 152
BcoDI GTCTC 6 cut(s) 29, 185, 295, 312, 613, 962
BfaI CTAG 1 cut(s) 858
BfmI CTRYAG 1 cut(s) 368
BfoI RGCGCY 2 cut(s) 257, 392
BglI GCCNNNNNGGC 2 cut(s) 134, 343
BglII AGATCT 2 cut(s) 805, 982
BisI GCNGC 9 cut(s) 27, 59, 143, 198, 218, 358, 368, 452, 468
BlsI GCNGC 9 cut(s) 28, 60, 144, 199, 219, 359, 369, 453, 469
Bme1390I CCNGG 5 cut(s) 73, 125, 152, 671, 908
BmeT110I CYCGRG 1 cut(s) 932
BmgT120I GGNCC 5 cut(s) 148, 153, 160, 170, 440
BmiI GGNNCC 3 cut(s) 112, 519, 905
BmrFI CCNGG 5 cut(s) 73, 125, 152, 671, 908
BmrI ACTGGG 1 cut(s) 238
BmsI GCATC 5 cut(s) 291, 578, 762, 803, 928
BmuI ACTGGG 1 cut(s) 238
BpiI GAAGAC 1 cut(s) 676
BplI GAGNNNNNCTC 2 cut(s) 95, 127
BpuEI CTTGAG 1 cut(s) 1067
BpuMI CCSGG 3 cut(s) 73, 125, 152
BsaAI YACGTR 1 cut(s) 385
BsaBI GATNNNNATC 1 cut(s) 550
BsaHI GRCGYC 2 cut(s) 38, 681
BsaI GGTCTC 1 cut(s) 295
BsaJI CCNNGG 4 cut(s) 71, 156, 471, 933
BsaWI WCCGGW 2 cut(s) 408, 611
Bsc4I CCNNNNNNNGG 7 cut(s) 77, 78, 157, 162, 231, 579, 970
Bse118I RCCGGY 2 cut(s) 162, 244
Bse1I ACTGG 4 cut(s) 233, 531, 656, 897
Bse3DI GCAATG 1 cut(s) 756
Bse8I GATNNNNATC 1 cut(s) 550
BseBI CCWGG 2 cut(s) 671, 908
BseDI CCNNGG 4 cut(s) 71, 156, 471, 933
BseGI GGATG 4 cut(s) 569, 794, 943, 979
BseJI GATNNNNATC 1 cut(s) 550
BseLI CCNNNNNNNGG 7 cut(s) 77, 78, 157, 162, 231, 579, 970
BseMI GCAATG 1 cut(s) 756
BseMII CTCAG 2 cut(s) 823, 973
BseNI ACTGG 4 cut(s) 233, 531, 656, 897
BsePI GCGCGC 2 cut(s) 54, 220
BseRI GAGGAG 3 cut(s) 427, 439, 448
BseX3I CGGCCG 1 cut(s) 88
BseXI GCAGC 4 cut(s) 129, 354, 454, 463
BseYI CCCAGC 1 cut(s) 145
BsgI GTGCAG 1 cut(s) 470
Bsh1236I CGCG 8 cut(s) 54, 56, 168, 202, 222, 316, 365, 643
Bsh1285I CGRYCG 2 cut(s) 45, 91
BshFI GGCC 9 cut(s) 90, 128, 137, 150, 155, 162, 172, 278, 442
BshNI GGYRCC 1 cut(s) 903
BsiEI CGRYCG 2 cut(s) 45, 91
BsiHKAI GWGCWC 1 cut(s) 108
BsiHKCI CYCGRG 1 cut(s) 932
BsiSI CCGG 9 cut(s) 73, 125, 151, 163, 245, 343, 409, 443, 612
BslI CCNNNNNNNGG 7 cut(s) 77, 78, 157, 162, 231, 579, 970
BsmAI GTCTC 6 cut(s) 29, 185, 295, 312, 613, 962
BsmBI CGTCTC 3 cut(s) 29, 185, 312
BsmI GAATGC 1 cut(s) 1054
BsnI GGCC 9 cut(s) 90, 128, 137, 150, 155, 162, 172, 278, 442
Bso31I GGTCTC 1 cut(s) 295
BsoBI CYCGRG 1 cut(s) 932
Bsp1286I GDGCHC 3 cut(s) 14, 108, 520
Bsp143I GATC 5 cut(s) 339, 351, 720, 805, 982
BspACI CCGC 9 cut(s) 26, 59, 121, 168, 197, 217, 357, 641, 941
BspANI GGCC 9 cut(s) 90, 128, 137, 150, 155, 162, 172, 278, 442
BspCNI CTCAG 2 cut(s) 822, 972
BspFNI CGCG 8 cut(s) 54, 56, 168, 202, 222, 316, 365, 643
BspLI GGNNCC 3 cut(s) 112, 519, 905
BspMAI CTGCAG 1 cut(s) 372
BspPI GGATC 2 cut(s) 334, 359
BspQI GCTCTTC 1 cut(s) 19
BspT107I GGYRCC 1 cut(s) 903
BspTNI GGTCTC 1 cut(s) 295
BsrBI CCGCTC 1 cut(s) 217
BsrDI GCAATG 1 cut(s) 756
BsrFI RCCGGY 2 cut(s) 162, 244
BsrI ACTGG 4 cut(s) 233, 531, 656, 897
BssAI RCCGGY 2 cut(s) 162, 244
BssECI CCNNGG 4 cut(s) 71, 156, 471, 933
BssHII GCGCGC 2 cut(s) 54, 220
BssMI GATC 5 cut(s) 339, 351, 720, 805, 982
BssNI GRCGYC 2 cut(s) 38, 681
Bst2UI CCWGG 2 cut(s) 671, 908
Bst6I CTCTTC 2 cut(s) 19, 999
BstACI GRCGYC 2 cut(s) 38, 681
BstBAI YACGTR 1 cut(s) 385
BstC8I GCNNGC 5 cut(s) 56, 135, 164, 170, 222
BstDEI CTNAG 2 cut(s) 809, 959
BstDSI CCRYGG 1 cut(s) 156
BstF5I GGATG 4 cut(s) 569, 794, 943, 979
BstFNI CGCG 8 cut(s) 54, 56, 168, 202, 222, 316, 365, 643
BstH2I RGCGCY 2 cut(s) 257, 392
BstHHI GCGC 9 cut(s) 56, 58, 168, 202, 222, 224, 256, 367, 391
BstKTI GATC 5 cut(s) 342, 354, 723, 808, 985
BstMAI GTCTC 6 cut(s) 29, 185, 295, 312, 613, 962
BstMBI GATC 5 cut(s) 339, 351, 720, 805, 982
BstMCI CGRYCG 2 cut(s) 45, 91
BstNI CCWGG 2 cut(s) 671, 908
BstNSI RCATGY 2 cut(s) 717, 1059
BstSCI CCNGG 5 cut(s) 71, 123, 150, 669, 906
BstSFI CTRYAG 1 cut(s) 368
BstUI CGCG 8 cut(s) 54, 56, 168, 202, 222, 316, 365, 643
BstV1I GCAGC 4 cut(s) 129, 354, 454, 463
BstV2I GAAGAC 1 cut(s) 676
BstX2I RGATCY 3 cut(s) 351, 805, 982
BstXI CCANNNNNNTGG 1 cut(s) 145
BstYI RGATCY 3 cut(s) 351, 805, 982
BstZI CGGCCG 1 cut(s) 88
BsuRI GGCC 9 cut(s) 90, 128, 137, 150, 155, 162, 172, 278, 442
BtgI CCRYGG 1 cut(s) 156
BtgZI GCGATG 1 cut(s) 861
BtsCI GGATG 4 cut(s) 569, 794, 943, 979
BtsI GCAGTG 1 cut(s) 377
BtsIMutI CAGTG 3 cut(s) 377, 817, 904
Cac8I GCNNGC 5 cut(s) 56, 135, 164, 170, 222
CfoI GCGC 9 cut(s) 56, 58, 168, 202, 222, 224, 256, 367, 391
Cfr10I RCCGGY 2 cut(s) 162, 244
Cfr13I GGNCC 5 cut(s) 148, 153, 160, 170, 440
CseI GACGC 1 cut(s) 322
Csp6I GTAC 4 cut(s) 235, 406, 649, 904
CviAII CATG 7 cut(s) 139, 178, 262, 714, 750, 1016, 1056
CviQI GTAC 4 cut(s) 235, 406, 649, 904
DdeI CTNAG 2 cut(s) 809, 959
DpnI GATC 5 cut(s) 341, 353, 722, 807, 984
DpnII GATC 5 cut(s) 339, 351, 720, 805, 982
DrdI GACNNNNNNGTC 1 cut(s) 37
DseDI GACNNNNNNGTC 1 cut(s) 37
EaeI YGGCCR 3 cut(s) 88, 126, 135
EagI CGGCCG 1 cut(s) 88
Eam1104I CTCTTC 2 cut(s) 19, 999
EarI CTCTTC 2 cut(s) 19, 999
Ecl136II GAGCTC 1 cut(s) 106
EclXI CGGCCG 1 cut(s) 88
Eco24I GRGCYC 3 cut(s) 14, 108, 520
Eco31I GGTCTC 1 cut(s) 295
Eco52I CGGCCG 1 cut(s) 88
Eco53kI GAGCTC 1 cut(s) 106
Eco72I CACGTG 1 cut(s) 385
Eco88I CYCGRG 1 cut(s) 932
EcoICRI GAGCTC 1 cut(s) 106
EcoRII CCWGG 2 cut(s) 669, 906
EcoT22I ATGCAT 1 cut(s) 755
EcoT38I GRGCYC 3 cut(s) 14, 108, 520
Esp3I CGTCTC 3 cut(s) 29, 185, 312
FaeI CATG 7 cut(s) 142, 181, 265, 717, 753, 1019, 1059
FatI CATG 7 cut(s) 138, 177, 261, 713, 749, 1015, 1055
FauI CCCGC 2 cut(s) 128, 161
FblI GTMKAC 1 cut(s) 41
Fnu4HI GCNGC 9 cut(s) 27, 59, 143, 198, 218, 358, 368, 452, 468
FokI GGATG 4 cut(s) 556, 781, 950, 986
FriOI GRGCYC 3 cut(s) 14, 108, 520
Fsp4HI GCNGC 9 cut(s) 27, 59, 143, 198, 218, 358, 368, 452, 468
FspBI CTAG 1 cut(s) 858
GlaI GCGC 9 cut(s) 55, 57, 167, 201, 221, 223, 255, 366, 390
GluI GCNGC 9 cut(s) 27, 59, 143, 198, 218, 358, 368, 452, 468
GsaI CCCAGC 1 cut(s) 149
HaeII RGCGCY 2 cut(s) 257, 392
HaeIII GGCC 9 cut(s) 90, 128, 137, 150, 155, 162, 172, 278, 442
HapII CCGG 9 cut(s) 73, 125, 151, 163, 245, 343, 409, 443, 612
HgaI GACGC 1 cut(s) 322
HhaI GCGC 9 cut(s) 56, 58, 168, 202, 222, 224, 256, 367, 391
Hin1I GRCGYC 2 cut(s) 38, 681
Hin1II CATG 7 cut(s) 142, 181, 265, 717, 753, 1019, 1059
Hin6I GCGC 9 cut(s) 54, 56, 166, 200, 220, 222, 254, 365, 389
HinP1I GCGC 9 cut(s) 54, 56, 166, 200, 220, 222, 254, 365, 389
HincII GTYRAC 1 cut(s) 42
HindII GTYRAC 1 cut(s) 42
HinfI GANTC 6 cut(s) 47, 307, 523, 551, 880, 890
HpaII CCGG 9 cut(s) 73, 125, 151, 163, 245, 343, 409, 443, 612
HphI GGTGA 3 cut(s) 196, 310, 629
Hpy166II GTNNAC 2 cut(s) 42, 382
Hpy188I TCNGA 6 cut(s) 103, 312, 463, 522, 725, 799
Hpy188III TCNNGA 1 cut(s) 349
Hpy8I GTNNAC 2 cut(s) 42, 382
Hpy99I CGWCG 3 cut(s) 34, 43, 89
HpyAV CCTTC 2 cut(s) 289, 782
HpyCH4IV ACGT 3 cut(s) 38, 384, 681
HpyCH4V TGCA 9 cut(s) 370, 451, 631, 753, 761, 794, 1026, 1052, 1068
HpyF3I CTNAG 2 cut(s) 809, 959
HpySE526I ACGT 3 cut(s) 38, 384, 681
Hsp92I GRCGYC 2 cut(s) 38, 681
Hsp92II CATG 7 cut(s) 142, 181, 265, 717, 753, 1019, 1059
HspAI GCGC 9 cut(s) 54, 56, 166, 200, 220, 222, 254, 365, 389
KpnI GGTACC 1 cut(s) 907
KroI GCCGGC 1 cut(s) 162
KroNI GCCGGC 1 cut(s) 164
Kzo9I GATC 5 cut(s) 339, 351, 720, 805, 982
LguI GCTCTTC 1 cut(s) 19
LmnI GCTCC 7 cut(s) 81, 103, 116, 523, 630, 643, 866
Lsp1109I GCAGC 4 cut(s) 129, 354, 454, 463
LweI GCATC 5 cut(s) 291, 578, 762, 803, 928
MaeI CTAG 1 cut(s) 858
MaeII ACGT 3 cut(s) 38, 384, 681
MaeIII GTNAC 3 cut(s) 48, 92, 1001
MalI GATC 5 cut(s) 341, 353, 722, 807, 984
MbiI CCGCTC 1 cut(s) 217
MboI GATC 5 cut(s) 339, 351, 720, 805, 982
MboII GAAGA 5 cut(s) 6, 676, 809, 977, 986
MflI RGATCY 3 cut(s) 351, 805, 982
MhlI GDGCHC 3 cut(s) 14, 108, 520
MlsI TGGCCA 1 cut(s) 137
MluCI AATT 4 cut(s) 726, 762, 830, 1021
MluNI TGGCCA 1 cut(s) 137
MlyI GAGTC 2 cut(s) 56, 532
MmeI TCCRAC 1 cut(s) 81
Mox20I TGGCCA 1 cut(s) 137
Mph1103I ATGCAT 1 cut(s) 755
MroNI GCCGGC 1 cut(s) 162
MscI TGGCCA 1 cut(s) 137
MseI TTAA 2 cut(s) 1041, 1102
MslI CAYNNNNRTG 2 cut(s) 182, 1014
Msp20I TGGCCA 1 cut(s) 137
MspI CCGG 9 cut(s) 73, 125, 151, 163, 245, 343, 409, 443, 612
MspR9I CCNGG 5 cut(s) 73, 125, 152, 671, 908
Mva1269I GAATGC 1 cut(s) 1054
MvaI CCWGG 2 cut(s) 671, 908
MvnI CGCG 8 cut(s) 54, 56, 168, 202, 222, 316, 365, 643
NaeI GCCGGC 1 cut(s) 164
NciI CCSGG 3 cut(s) 73, 125, 152
NdeII GATC 5 cut(s) 339, 351, 720, 805, 982
NgoMIV GCCGGC 1 cut(s) 162
NlaIII CATG 7 cut(s) 142, 181, 265, 717, 753, 1019, 1059
NlaIV GGNNCC 3 cut(s) 112, 519, 905
NmeAIII GCCGAG 2 cut(s) 87, 496
NmuCI GTSAC 2 cut(s) 48, 92
NsiI ATGCAT 1 cut(s) 755
NspI RCATGY 2 cut(s) 717, 1059
PalAI GGCGCGCC 1 cut(s) 220
PauI GCGCGC 2 cut(s) 54, 220
PciI ACATGT 1 cut(s) 1055
PciSI GCTCTTC 1 cut(s) 19
PcsI WCGNNNNNNNCGW 1 cut(s) 38
PctI GAATGC 1 cut(s) 1054
PdiI GCCGGC 1 cut(s) 164
PfeI GAWTC 4 cut(s) 307, 551, 880, 890
PflFI GACNNNGTC 1 cut(s) 46
PkrI GCNGC 9 cut(s) 28, 60, 144, 199, 219, 359, 369, 453, 469
PleI GAGTC 2 cut(s) 55, 531
PmaCI CACGTG 1 cut(s) 385
PmlI CACGTG 1 cut(s) 385
PpsI GAGTC 2 cut(s) 55, 531
Ppu21I YACGTR 1 cut(s) 385
PscI ACATGT 1 cut(s) 1055
Psp124BI GAGCTC 1 cut(s) 108
Psp6I CCWGG 2 cut(s) 669, 906
PspCI CACGTG 1 cut(s) 385
PspFI CCCAGC 1 cut(s) 145
PspGI CCWGG 2 cut(s) 669, 906
PspN4I GGNNCC 3 cut(s) 112, 519, 905
PspPI GGNCC 5 cut(s) 148, 153, 160, 170, 440
PstI CTGCAG 1 cut(s) 372
PsuI RGATCY 3 cut(s) 351, 805, 982
PsyI GACNNNGTC 1 cut(s) 46
PteI GCGCGC 2 cut(s) 54, 220
RsaI GTAC 4 cut(s) 236, 407, 650, 905
RsaNI GTAC 4 cut(s) 235, 406, 649, 904
RseI CAYNNNNRTG 2 cut(s) 182, 1014
SacI GAGCTC 1 cut(s) 108
SalI GTCGAC 1 cut(s) 40
SapI GCTCTTC 1 cut(s) 19
SaqAI TTAA 2 cut(s) 1041, 1102
SatI GCNGC 9 cut(s) 27, 59, 143, 198, 218, 358, 368, 452, 468
Sau3AI GATC 5 cut(s) 339, 351, 720, 805, 982
Sau96I GGNCC 5 cut(s) 148, 153, 160, 170, 440
SchI GAGTC 2 cut(s) 56, 532
ScrFI CCNGG 5 cut(s) 73, 125, 152, 671, 908
SduI GDGCHC 3 cut(s) 14, 108, 520
SfaNI GCATC 5 cut(s) 291, 578, 762, 803, 928
SfcI CTRYAG 1 cut(s) 368
SfiI GGCCNNNNNGGCC 1 cut(s) 134
SgsI GGCGCGCC 1 cut(s) 220
SmiMI CAYNNNNRTG 2 cut(s) 182, 1014
SmlI CTYRAG 1 cut(s) 1082
SmoI CTYRAG 1 cut(s) 1082
Sse9I AATT 4 cut(s) 726, 762, 830, 1021
SsiI CCGC 9 cut(s) 26, 59, 121, 168, 197, 217, 357, 641, 941
SspI AATATT 1 cut(s) 1078
SspMI CTAG 1 cut(s) 858
SstI GAGCTC 1 cut(s) 108
StyD4I CCNGG 5 cut(s) 71, 123, 150, 669, 906
TaiI ACGT 3 cut(s) 41, 387, 684
TaqI TCGA 3 cut(s) 41, 239, 915
TaqII GACCGA 1 cut(s) 59
TasI AATT 4 cut(s) 726, 762, 830, 1021
TatI WGTACW 1 cut(s) 648
TauI GCSGC 5 cut(s) 29, 61, 200, 220, 360
TfiI GAWTC 4 cut(s) 307, 551, 880, 890
Tru1I TTAA 2 cut(s) 1041, 1102
Tru9I TTAA 2 cut(s) 1041, 1102
TscAI CASTG 3 cut(s) 377, 817, 904
TseFI GTSAC 2 cut(s) 48, 92
TseI GCWGC 4 cut(s) 142, 367, 451, 467
Tsp45I GTSAC 2 cut(s) 48, 92
TspDTI ATGAA 3 cut(s) 510, 864, 1061
TspGWI ACGGA 2 cut(s) 47, 521
TspRI CASTG 3 cut(s) 377, 817, 904
Tth111I GACNNNGTC 1 cut(s) 46
XapI RAATTY 1 cut(s) 830
XceI RCATGY 2 cut(s) 717, 1059
XcmI CCANNNNNNNNNTGG 2 cut(s) 904, 971
XmiI GTMKAC 1 cut(s) 41
XspI CTAG 1 cut(s) 858
ZraI GACGTC 2 cut(s) 39, 682
Zsp2I ATGCAT 1 cut(s) 755
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.