Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0008516

Physical Location & Seq

Genomic Coordinates Forward (+)

63288058 .. 63291410

Gene Structure 3353 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00383670.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1011 bp

ATGTCATCGGGCTCTTCAGCTACGGCGACGTCGACCGAGTCACGCGCGCCGCTTCTGCTTCCGCGGCAGGGGAGCGACGGCCGTGACTCGTCGGAGCTCGGCTCCCCGACCCGCCCGGCCACGCTGGCCATGCTGCTGGGCCGGGCCACGGGCCGGCGCGGGCCGTCCATGCTGGTGAGGGAGACGGCGGCGCGTGAGCTGGACGAGCGGCGCGCCGACTGGGGGTACTCGAAGCCGGTGGTGGCGCTGGACATGATGTGGAACACGGCGTTCGTGGTGGTCTCGGTGGTGATGCTGATTCTGACCCGAGACGAGAACCCGAACACGCCGATCCGGCTGTGGATCTGCGGCTACGCGCTGCAGTGCTTTGTCCACGTGGCGCTTGTGTGGATTGAGTACCGGAGGAGGAATACGAGGAGAGGGAGGAGAGGGCCGGAGGTGCAGCAGAGCTCGAAGCTGCCGAGGCTAATGATACTGATGATGATGAAACAGCTACGGTTCCGAGTCGTTCCAGTGTCCGGTGGTGATTTGCTCCTGCAAAATGCTCCGCGTTTGTACTGGTTGTCTGTGGTTTTCCTGGCATTTGACGTCTTCTTTGCCATCTTTTGTGTTGTTCTGGCATGTTTGATCGGAATTGCTCTTTGTTGCTGTTTGCCATGCATCATTGCAATTCTATATGCTGTGGCAGGACAGGAAGGTGCATCCGAAGCAGATCTCAGTGTTCTTCCAAAATACAGATTTAGAATATCAGGCAATGAAAAATCTAGTGTAGGAGCAGGGAAAATGATTCCAATGGAATCAACCAGTGGGTACCTGGCAGTCGAGCGTATTCTTTTACCCGAGGATGCGGAATGTTGTATATGTCTCAGCCAATATGAGGATGGGGCAGATCTTCACACTCTTCCCTGTAACCATCACTTCCATGCTAATTGCATTGTGAAATGGCTTAAAATGAATGCAACATGTCCTCTCTGCAAATACAATATTCTCAAGGGAAGTGAACAGGTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000741 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006996 GO:0006997 GO:0007275 GO:0008150 GO:0009553 GO:0009559 GO:0009561 GO:0009987 GO:0010197 GO:0016043 GO:0030154 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048229 GO:0048284 GO:0048856 GO:0048869 GO:0071840

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Beta-Casp Lactamase_B_6 RMMBL zf-RING_2

Protein Analysis

336

Amino Acids

37.27

Weight (kDa)

8.81

Isoelectric Point (pI)

52.74

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-RING_2	PF13639	284 - 326	3.2e-15	Ring finger domain
zf-RING_11	PF17123	284 - 312	7.3e-09	RING-like zinc finger
zf-rbx1	PF12678	284 - 326	9.8e-09	RING-H2 zinc finger domain
zf-C3HC4_2	PF13923	284 - 325	1.6e-07	Zinc finger, C3HC4 type (RING finger)
zf-C3HC4	PF00097	285 - 325	1.1e-06	Zinc finger, C3HC4 type (RING finger)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008516)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G68070 AT2G01735 AT2G01735
fragaria_vesca	FvH4_4g33530 FvH4_5g19942 FvH4_6g33182
malus_domestica	MD13G1020200.v1.1 MD16G1018400.v1.1
prunus_persica	Prupe.1G333500_v2.0.a1 Prupe.1G333500_v2.0.a1
pyrus_communis	pycom16g01680
rosa_chinensis	RchiOBHm_Chr4g0443041
rosa_laevigata	RLG00000005960
rosa_multiflora	Rmu_co8232139.1_g000001 Rmu_sc0008055.1_g000003 Rmu_sc0015292.1_g000001
rosa_roxburghii	Rroxscaffold_5G00383670
rosa_rugosa	Rorug04G0344000
rosa_samantha	Rh4AG398200 Rh4BG409700 Rh4CG425200 Rh4DG404500
rosa_wichuraiana	Rw4G034310

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	2 cut(s)	32, 591
Acc65I	GGTACC	1 cut(s)	810
AccB1I	GGYRCC	1 cut(s)	810
AccBSI	CCGCTC	1 cut(s)	208
AccI	GTMKAC	1 cut(s)	32
AccII	CGCG	8 cut(s)	45, 47, 64, 159, 193, 213, 356, 550
AclWI	GGATC	2 cut(s)	325, 350
AcoI	YGGCCR	3 cut(s)	79, 117, 126
AcvI	CACGTG	1 cut(s)	376
AcyI	GRCGYC	2 cut(s)	29, 588
AfaI	GTAC	4 cut(s)	227, 398, 557, 812
AfiI	CCNNNNNNNGG	6 cut(s)	68, 148, 153, 222, 518, 877
AflIII	ACRYGT	1 cut(s)	962
AjnI	CCWGG	2 cut(s)	576, 813
AluBI	AGCT	6 cut(s)	20, 97, 199, 450, 457, 493
AluI	AGCT	6 cut(s)	20, 97, 199, 450, 457, 493
Alw21I	GWGCWC	2 cut(s)	99, 452
Alw26I	GTCTC	4 cut(s)	176, 286, 303, 869
AlwI	GGATC	2 cut(s)	325, 350
Ama87I	CYCGRG	2 cut(s)	306, 839
AoxI	GGCC	8 cut(s)	79, 117, 126, 139, 144, 151, 161, 431
ApeKI	GCWGC	4 cut(s)	133, 358, 442, 457
ArsI	GACNNNNNNTTYG	2 cut(s)	578, 610
AscI	GGCGCGCC	1 cut(s)	211
Asp718I	GGTACC	1 cut(s)	810
AspLEI	GCGC	9 cut(s)	47, 49, 159, 193, 213, 215, 247, 358, 382
AspS9I	GGNCC	5 cut(s)	139, 144, 151, 161, 431
AsuC2I	CCSGG	2 cut(s)	116, 143
AsuHPI	GGTGA	3 cut(s)	187, 301, 536
AvaI	CYCGRG	2 cut(s)	306, 839
BalI	TGGCCA	1 cut(s)	128
BanI	GGYRCC	1 cut(s)	810
BanII	GRGCYC	3 cut(s)	14, 99, 452
BbrPI	CACGTG	1 cut(s)	376
BbsI	GAAGAC	1 cut(s)	583
Bbv12I	GWGCWC	2 cut(s)	99, 452
BbvI	GCAGC	4 cut(s)	120, 345, 444, 454
BccI	CCATC	3 cut(s)	608, 875, 921
BceAI	ACGGC	6 cut(s)	39, 66, 94, 148, 201, 282
BciT130I	CCWGG	2 cut(s)	578, 815
BcnI	CCSGG	2 cut(s)	116, 143
BcoDI	GTCTC	4 cut(s)	176, 286, 303, 869
BfaI	CTAG	1 cut(s)	765
BfmI	CTRYAG	1 cut(s)	359
BfoI	RGCGCY	2 cut(s)	248, 383
BglI	GCCNNNNNGGC	2 cut(s)	125, 334
BglII	AGATCT	2 cut(s)	712, 889
BisI	GCNGC	9 cut(s)	50, 65, 134, 189, 209, 349, 359, 443, 458
BlsI	GCNGC	9 cut(s)	51, 66, 135, 190, 210, 350, 360, 444, 459
Bme1390I	CCNGG	4 cut(s)	116, 143, 578, 815
BmeT110I	CYCGRG	2 cut(s)	306, 839
BmgT120I	GGNCC	5 cut(s)	139, 144, 151, 161, 431
BmiI	GGNNCC	3 cut(s)	103, 500, 812
BmrFI	CCNGG	4 cut(s)	116, 143, 578, 815
BmrI	ACTGGG	1 cut(s)	229
BmsI	GCATC	4 cut(s)	282, 669, 710, 835
BmuI	ACTGGG	1 cut(s)	229
BpiI	GAAGAC	1 cut(s)	583
BplI	GAGNNNNNCTC	2 cut(s)	86, 118
BpuEI	CTTGAG	1 cut(s)	974
BpuMI	CCSGG	2 cut(s)	116, 143
BsaAI	YACGTR	1 cut(s)	376
BsaHI	GRCGYC	2 cut(s)	29, 588
BsaI	GGTCTC	1 cut(s)	286
BsaJI	CCNNGG	4 cut(s)	62, 147, 461, 840
BsaWI	WCCGGW	2 cut(s)	399, 518
Bsc4I	CCNNNNNNNGG	6 cut(s)	68, 148, 153, 222, 518, 877
Bse118I	RCCGGY	2 cut(s)	153, 235
Bse1I	ACTGG	4 cut(s)	224, 512, 563, 804
Bse3DI	GCAATG	2 cut(s)	663, 760
BseBI	CCWGG	2 cut(s)	578, 815
BseDI	CCNNGG	4 cut(s)	62, 147, 461, 840
BseGI	GGATG	3 cut(s)	701, 850, 886
BseLI	CCNNNNNNNGG	6 cut(s)	68, 148, 153, 222, 518, 877
BseMI	GCAATG	2 cut(s)	663, 760
BseMII	CTCAG	2 cut(s)	730, 880
BseNI	ACTGG	4 cut(s)	224, 512, 563, 804
BsePI	GCGCGC	2 cut(s)	45, 211
BseRI	GAGGAG	3 cut(s)	418, 430, 439
BseX3I	CGGCCG	1 cut(s)	79
BseXI	GCAGC	4 cut(s)	120, 345, 444, 454
BseYI	CCCAGC	1 cut(s)	136
BsgI	GTGCAG	1 cut(s)	461
Bsh1236I	CGCG	8 cut(s)	45, 47, 64, 159, 193, 213, 356, 550
Bsh1285I	CGRYCG	2 cut(s)	36, 82
BshFI	GGCC	8 cut(s)	81, 119, 128, 141, 146, 153, 163, 433
BshNI	GGYRCC	1 cut(s)	810
BsiEI	CGRYCG	2 cut(s)	36, 82
BsiHKAI	GWGCWC	2 cut(s)	99, 452
BsiHKCI	CYCGRG	2 cut(s)	306, 839
BsiSI	CCGG	8 cut(s)	116, 142, 154, 236, 334, 400, 434, 519
BslI	CCNNNNNNNGG	6 cut(s)	68, 148, 153, 222, 518, 877
BsmAI	GTCTC	4 cut(s)	176, 286, 303, 869
BsmBI	CGTCTC	2 cut(s)	176, 303
BsmI	GAATGC	1 cut(s)	961
BsnI	GGCC	8 cut(s)	81, 119, 128, 141, 146, 153, 163, 433
Bso31I	GGTCTC	1 cut(s)	286
BsoBI	CYCGRG	2 cut(s)	306, 839
Bsp1286I	GDGCHC	3 cut(s)	14, 99, 452
Bsp143I	GATC	5 cut(s)	330, 342, 627, 712, 889
BspANI	GGCC	8 cut(s)	81, 119, 128, 141, 146, 153, 163, 433
BspCNI	CTCAG	2 cut(s)	729, 879
BspFNI	CGCG	8 cut(s)	45, 47, 64, 159, 193, 213, 356, 550
BspLI	GGNNCC	3 cut(s)	103, 500, 812
BspMAI	CTGCAG	1 cut(s)	363
BspPI	GGATC	2 cut(s)	325, 350
BspQI	GCTCTTC	1 cut(s)	19
BspT107I	GGYRCC	1 cut(s)	810
BspTNI	GGTCTC	1 cut(s)	286
BsrBI	CCGCTC	1 cut(s)	208
BsrDI	GCAATG	2 cut(s)	663, 760
BsrFI	RCCGGY	2 cut(s)	153, 235
BsrI	ACTGG	4 cut(s)	224, 512, 563, 804
BssAI	RCCGGY	2 cut(s)	153, 235
BssECI	CCNNGG	4 cut(s)	62, 147, 461, 840
BssHII	GCGCGC	2 cut(s)	45, 211
BssMI	GATC	5 cut(s)	330, 342, 627, 712, 889
BssNI	GRCGYC	2 cut(s)	29, 588
Bst2UI	CCWGG	2 cut(s)	578, 815
Bst4CI	ACNGT	1 cut(s)	498
Bst6I	CTCTTC	2 cut(s)	19, 906
BstACI	GRCGYC	2 cut(s)	29, 588
BstBAI	YACGTR	1 cut(s)	376
BstC8I	GCNNGC	5 cut(s)	47, 126, 155, 161, 213
BstDEI	CTNAG	2 cut(s)	716, 866
BstDSI	CCRYGG	2 cut(s)	62, 147
BstF5I	GGATG	3 cut(s)	701, 850, 886
BstFNI	CGCG	8 cut(s)	45, 47, 64, 159, 193, 213, 356, 550
BstH2I	RGCGCY	2 cut(s)	248, 383
BstHHI	GCGC	9 cut(s)	47, 49, 159, 193, 213, 215, 247, 358, 382
BstKTI	GATC	5 cut(s)	333, 345, 630, 715, 892
BstMAI	GTCTC	4 cut(s)	176, 286, 303, 869
BstMBI	GATC	5 cut(s)	330, 342, 627, 712, 889
BstMCI	CGRYCG	2 cut(s)	36, 82
BstNI	CCWGG	2 cut(s)	578, 815
BstNSI	RCATGY	2 cut(s)	624, 966
BstSCI	CCNGG	4 cut(s)	114, 141, 576, 813
BstSFI	CTRYAG	1 cut(s)	359
BstUI	CGCG	8 cut(s)	45, 47, 64, 159, 193, 213, 356, 550
BstV1I	GCAGC	4 cut(s)	120, 345, 444, 454
BstV2I	GAAGAC	1 cut(s)	583
BstX2I	RGATCY	3 cut(s)	342, 712, 889
BstXI	CCANNNNNNTGG	1 cut(s)	136
BstYI	RGATCY	3 cut(s)	342, 712, 889
BstZI	CGGCCG	1 cut(s)	79
BsuRI	GGCC	8 cut(s)	81, 119, 128, 141, 146, 153, 163, 433
BtgI	CCRYGG	2 cut(s)	62, 147
BtsCI	GGATG	3 cut(s)	701, 850, 886
BtsI	GCAGTG	1 cut(s)	368
BtsIMutI	CAGTG	4 cut(s)	368, 519, 724, 811
Cac8I	GCNNGC	5 cut(s)	47, 126, 155, 161, 213
CfoI	GCGC	9 cut(s)	47, 49, 159, 193, 213, 215, 247, 358, 382
Cfr10I	RCCGGY	2 cut(s)	153, 235
Cfr13I	GGNCC	5 cut(s)	139, 144, 151, 161, 431
Cfr42I	CCGCGG	1 cut(s)	65
Csp6I	GTAC	4 cut(s)	226, 397, 556, 811
CviAII	CATG	7 cut(s)	130, 169, 253, 621, 657, 923, 963
CviQI	GTAC	4 cut(s)	226, 397, 556, 811
DdeI	CTNAG	2 cut(s)	716, 866
DpnI	GATC	5 cut(s)	332, 344, 629, 714, 891
DpnII	GATC	5 cut(s)	330, 342, 627, 712, 889
EaeI	YGGCCR	3 cut(s)	79, 117, 126
EagI	CGGCCG	1 cut(s)	79
Eam1104I	CTCTTC	2 cut(s)	19, 906
EarI	CTCTTC	2 cut(s)	19, 906
Ecl136II	GAGCTC	2 cut(s)	97, 450
EclXI	CGGCCG	1 cut(s)	79
Eco24I	GRGCYC	3 cut(s)	14, 99, 452
Eco31I	GGTCTC	1 cut(s)	286
Eco52I	CGGCCG	1 cut(s)	79
Eco53kI	GAGCTC	2 cut(s)	97, 450
Eco72I	CACGTG	1 cut(s)	376
Eco88I	CYCGRG	2 cut(s)	306, 839
EcoICRI	GAGCTC	2 cut(s)	97, 450
EcoRII	CCWGG	2 cut(s)	576, 813
EcoT22I	ATGCAT	1 cut(s)	662
EcoT38I	GRGCYC	3 cut(s)	14, 99, 452
Esp3I	CGTCTC	2 cut(s)	176, 303
FaeI	CATG	7 cut(s)	133, 172, 256, 624, 660, 926, 966
FatI	CATG	7 cut(s)	129, 168, 252, 620, 656, 922, 962
FauI	CCCGC	2 cut(s)	119, 152
FblI	GTMKAC	1 cut(s)	32
Fnu4HI	GCNGC	9 cut(s)	50, 65, 134, 189, 209, 349, 359, 443, 458
FokI	GGATG	3 cut(s)	688, 857, 893
FriOI	GRGCYC	3 cut(s)	14, 99, 452
Fsp4HI	GCNGC	9 cut(s)	50, 65, 134, 189, 209, 349, 359, 443, 458
FspBI	CTAG	1 cut(s)	765
GlaI	GCGC	9 cut(s)	46, 48, 158, 192, 212, 214, 246, 357, 381
GluI	GCNGC	9 cut(s)	50, 65, 134, 189, 209, 349, 359, 443, 458
GsaI	CCCAGC	1 cut(s)	140
HaeII	RGCGCY	2 cut(s)	248, 383
HaeIII	GGCC	8 cut(s)	81, 119, 128, 141, 146, 153, 163, 433
HapII	CCGG	8 cut(s)	116, 142, 154, 236, 334, 400, 434, 519
HhaI	GCGC	9 cut(s)	47, 49, 159, 193, 213, 215, 247, 358, 382
Hin1I	GRCGYC	2 cut(s)	29, 588
Hin1II	CATG	7 cut(s)	133, 172, 256, 624, 660, 926, 966
Hin6I	GCGC	9 cut(s)	45, 47, 157, 191, 211, 213, 245, 356, 380
HinP1I	GCGC	9 cut(s)	45, 47, 157, 191, 211, 213, 245, 356, 380
HincII	GTYRAC	1 cut(s)	33
HindII	GTYRAC	1 cut(s)	33
HinfI	GANTC	6 cut(s)	38, 86, 298, 504, 787, 797
HpaII	CCGG	8 cut(s)	116, 142, 154, 236, 334, 400, 434, 519
HphI	GGTGA	3 cut(s)	187, 301, 536
Hpy166II	GTNNAC	3 cut(s)	33, 373, 1001
Hpy188I	TCNGA	5 cut(s)	94, 303, 503, 632, 706
Hpy8I	GTNNAC	3 cut(s)	33, 373, 1001
Hpy99I	CGWCG	4 cut(s)	31, 34, 80, 94
HpyAV	CCTTC	1 cut(s)	689
HpyCH4III	ACNGT	1 cut(s)	498
HpyCH4IV	ACGT	3 cut(s)	29, 375, 588
HpyCH4V	TGCA	9 cut(s)	361, 442, 538, 660, 668, 701, 933, 959, 975
HpyF3I	CTNAG	2 cut(s)	716, 866
HpySE526I	ACGT	3 cut(s)	29, 375, 588
Hsp92I	GRCGYC	2 cut(s)	29, 588
Hsp92II	CATG	7 cut(s)	133, 172, 256, 624, 660, 926, 966
HspAI	GCGC	9 cut(s)	45, 47, 157, 191, 211, 213, 245, 356, 380
KpnI	GGTACC	1 cut(s)	814
KroI	GCCGGC	1 cut(s)	153
KroNI	GCCGGC	1 cut(s)	155
KspI	CCGCGG	1 cut(s)	65
Kzo9I	GATC	5 cut(s)	330, 342, 627, 712, 889
LguI	GCTCTTC	1 cut(s)	19
LmnI	GCTCC	6 cut(s)	72, 94, 107, 537, 550, 773
Lsp1109I	GCAGC	4 cut(s)	120, 345, 444, 454
LweI	GCATC	4 cut(s)	282, 669, 710, 835
MaeI	CTAG	1 cut(s)	765
MaeII	ACGT	3 cut(s)	29, 375, 588
MaeIII	GTNAC	3 cut(s)	39, 83, 908
MalI	GATC	5 cut(s)	332, 344, 629, 714, 891
MbiI	CCGCTC	1 cut(s)	208
MboI	GATC	5 cut(s)	330, 342, 627, 712, 889
MboII	GAAGA	5 cut(s)	6, 583, 716, 884, 893
MflI	RGATCY	3 cut(s)	342, 712, 889
MhlI	GDGCHC	3 cut(s)	14, 99, 452
MlsI	TGGCCA	1 cut(s)	128
MluCI	AATT	3 cut(s)	633, 669, 928
MluNI	TGGCCA	1 cut(s)	128
MlyI	GAGTC	3 cut(s)	47, 80, 513
MmeI	TCCRAC	1 cut(s)	72
Mox20I	TGGCCA	1 cut(s)	128
Mph1103I	ATGCAT	1 cut(s)	662
MroNI	GCCGGC	1 cut(s)	153
MscI	TGGCCA	1 cut(s)	128
MseI	TTAA	2 cut(s)	948, 1009
MslI	CAYNNNNRTG	2 cut(s)	173, 921
Msp20I	TGGCCA	1 cut(s)	128
MspA1I	CMGCKG	1 cut(s)	64
MspI	CCGG	8 cut(s)	116, 142, 154, 236, 334, 400, 434, 519
MspR9I	CCNGG	4 cut(s)	116, 143, 578, 815
Mva1269I	GAATGC	1 cut(s)	961
MvaI	CCWGG	2 cut(s)	578, 815
MvnI	CGCG	8 cut(s)	45, 47, 64, 159, 193, 213, 356, 550
NaeI	GCCGGC	1 cut(s)	155
NciI	CCSGG	2 cut(s)	116, 143
NdeII	GATC	5 cut(s)	330, 342, 627, 712, 889
NgoMIV	GCCGGC	1 cut(s)	153
NlaIII	CATG	7 cut(s)	133, 172, 256, 624, 660, 926, 966
NlaIV	GGNNCC	3 cut(s)	103, 500, 812
NmeAIII	GCCGAG	2 cut(s)	78, 486
NmuCI	GTSAC	2 cut(s)	39, 83
NsiI	ATGCAT	1 cut(s)	662
NspI	RCATGY	2 cut(s)	624, 966
PalAI	GGCGCGCC	1 cut(s)	211
PauI	GCGCGC	2 cut(s)	45, 211
PciI	ACATGT	1 cut(s)	962
PciSI	GCTCTTC	1 cut(s)	19
PcsI	WCGNNNNNNNCGW	2 cut(s)	29, 458
PctI	GAATGC	1 cut(s)	961
PdiI	GCCGGC	1 cut(s)	155
PfeI	GAWTC	3 cut(s)	298, 787, 797
PflFI	GACNNNGTC	1 cut(s)	37
PkrI	GCNGC	9 cut(s)	51, 66, 135, 190, 210, 350, 360, 444, 459
PleI	GAGTC	3 cut(s)	46, 80, 512
PmaCI	CACGTG	1 cut(s)	376
PmlI	CACGTG	1 cut(s)	376
PpsI	GAGTC	3 cut(s)	46, 80, 512
Ppu21I	YACGTR	1 cut(s)	376
PscI	ACATGT	1 cut(s)	962
Psp124BI	GAGCTC	2 cut(s)	99, 452
Psp6I	CCWGG	2 cut(s)	576, 813
PspCI	CACGTG	1 cut(s)	376
PspFI	CCCAGC	1 cut(s)	136
PspGI	CCWGG	2 cut(s)	576, 813
PspN4I	GGNNCC	3 cut(s)	103, 500, 812
PspPI	GGNCC	5 cut(s)	139, 144, 151, 161, 431
PstI	CTGCAG	1 cut(s)	363
PsuI	RGATCY	3 cut(s)	342, 712, 889
PsyI	GACNNNGTC	1 cut(s)	37
PteI	GCGCGC	2 cut(s)	45, 211
RsaI	GTAC	4 cut(s)	227, 398, 557, 812
RsaNI	GTAC	4 cut(s)	226, 397, 556, 811
RseI	CAYNNNNRTG	2 cut(s)	173, 921
SacI	GAGCTC	2 cut(s)	99, 452
SacII	CCGCGG	1 cut(s)	65
SalI	GTCGAC	1 cut(s)	31
SapI	GCTCTTC	1 cut(s)	19
SaqAI	TTAA	2 cut(s)	948, 1009
SatI	GCNGC	9 cut(s)	50, 65, 134, 189, 209, 349, 359, 443, 458
Sau3AI	GATC	5 cut(s)	330, 342, 627, 712, 889
Sau96I	GGNCC	5 cut(s)	139, 144, 151, 161, 431
SchI	GAGTC	3 cut(s)	47, 80, 513
ScrFI	CCNGG	4 cut(s)	116, 143, 578, 815
SduI	GDGCHC	3 cut(s)	14, 99, 452
SfaNI	GCATC	4 cut(s)	282, 669, 710, 835
SfcI	CTRYAG	1 cut(s)	359
SfiI	GGCCNNNNNGGCC	1 cut(s)	125
Sfr303I	CCGCGG	1 cut(s)	65
SgrBI	CCGCGG	1 cut(s)	65
SgsI	GGCGCGCC	1 cut(s)	211
SmiMI	CAYNNNNRTG	2 cut(s)	173, 921
SmlI	CTYRAG	1 cut(s)	989
SmoI	CTYRAG	1 cut(s)	989
Sse9I	AATT	3 cut(s)	633, 669, 928
SspI	AATATT	1 cut(s)	985
SspMI	CTAG	1 cut(s)	765
SstI	GAGCTC	2 cut(s)	99, 452
StyD4I	CCNGG	4 cut(s)	114, 141, 576, 813
TaaI	ACNGT	1 cut(s)	498
TaiI	ACGT	3 cut(s)	32, 378, 591
TaqI	TCGA	4 cut(s)	32, 230, 452, 822
TaqII	GACCGA	1 cut(s)	50
TasI	AATT	3 cut(s)	633, 669, 928
TatI	WGTACW	1 cut(s)	555
TauI	GCSGC	5 cut(s)	52, 67, 191, 211, 351
TfiI	GAWTC	3 cut(s)	298, 787, 797
Tru1I	TTAA	2 cut(s)	948, 1009
Tru9I	TTAA	2 cut(s)	948, 1009
TscAI	CASTG	4 cut(s)	368, 519, 724, 811
TseFI	GTSAC	2 cut(s)	39, 83
TseI	GCWGC	4 cut(s)	133, 358, 442, 457
Tsp45I	GTSAC	2 cut(s)	39, 83
TspDTI	ATGAA	3 cut(s)	500, 771, 968
TspRI	CASTG	4 cut(s)	368, 519, 724, 811
Tth111I	GACNNNGTC	1 cut(s)	37
XceI	RCATGY	2 cut(s)	624, 966
XcmI	CCANNNNNNNNNTGG	2 cut(s)	811, 878
XmiI	GTMKAC	1 cut(s)	32
XspI	CTAG	1 cut(s)	765
ZraI	GACGTC	2 cut(s)	30, 589
Zsp2I	ATGCAT	1 cut(s)	662

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.