E3 ubiquitin protein ligase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G68070 AT2G01735 AT2G01735 |
| fragaria_vesca | FvH4_4g33530 FvH4_5g19942 FvH4_6g33182 |
| malus_domestica | MD13G1020200.v1.1 MD16G1018400.v1.1 |
| prunus_persica | Prupe.1G333500_v2.0.a1 Prupe.1G333500_v2.0.a1 |
| pyrus_communis | pycom16g01680 |
| rosa_chinensis | RchiOBHm_Chr4g0443041 |
| rosa_laevigata | RLG00000005960 |
| rosa_multiflora | Rmu_co8232139.1_g000001 Rmu_sc0008055.1_g000003 Rmu_sc0015292.1_g000001 |
| rosa_roxburghii | Rroxscaffold_5G00383670 |
| rosa_rugosa | Rorug04G0344000 |
| rosa_samantha | Rh4AG398200 Rh4BG409700 Rh4CG425200 Rh4DG404500 |
| rosa_wichuraiana | Rw4G034310 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 2 cut(s) | 55, 214 |
| AccI | GTMKAC | 1 cut(s) | 943 |
| AccII | CGCG | 4 cut(s) | 87, 219, 547, 962 |
| AclWI | GGATC | 3 cut(s) | 331, 356, 440 |
| AcoI | YGGCCR | 1 cut(s) | 82 |
| AcyI | GRCGYC | 1 cut(s) | 453 |
| AfaI | GTAC | 5 cut(s) | 404, 671, 926, 1000, 1094 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 205, 472, 991 |
| AflIII | ACRYGT | 1 cut(s) | 1076 |
| AgeI | ACCGGT | 2 cut(s) | 155, 1117 |
| AjnI | CCWGG | 3 cut(s) | 69, 447, 471 |
| AluBI | AGCT | 2 cut(s) | 524, 1006 |
| AluI | AGCT | 2 cut(s) | 524, 1006 |
| Alw21I | GWGCWC | 1 cut(s) | 324 |
| Alw26I | GTCTC | 3 cut(s) | 182, 560, 983 |
| AlwI | GGATC | 3 cut(s) | 331, 356, 440 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 38 |
| Ama87I | CYCGRG | 1 cut(s) | 198 |
| AoxI | GGCC | 4 cut(s) | 82, 150, 166, 195 |
| ApeKI | GCWGC | 8 cut(s) | 32, 78, 139, 364, 512, 515, 518, 521 |
| AscI | GGCGCGCC | 1 cut(s) | 217 |
| AsiGI | ACCGGT | 2 cut(s) | 155, 1117 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 645 |
| AspLEI | GCGC | 5 cut(s) | 52, 219, 221, 364, 549 |
| AspS9I | GGNCC | 3 cut(s) | 150, 167, 196 |
| AsuC2I | CCSGG | 2 cut(s) | 199, 200 |
| AsuHPI | GGTGA | 1 cut(s) | 650 |
| AvaI | CYCGRG | 1 cut(s) | 198 |
| AxyI | CCTNAGG | 1 cut(s) | 954 |
| BbsI | GAAGAC | 1 cut(s) | 697 |
| Bbv12I | GWGCWC | 1 cut(s) | 324 |
| BbvI | GCAGC | 8 cut(s) | 44, 90, 126, 351, 524, 527, 530, 533 |
| BccI | CCATC | 2 cut(s) | 722, 989 |
| BceAI | ACGGC | 4 cut(s) | 42, 147, 207, 288 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 163, 197, 467, 501 |
| BciT130I | CCWGG | 3 cut(s) | 71, 449, 473 |
| BcnI | CCSGG | 2 cut(s) | 199, 200 |
| BcoDI | GTCTC | 3 cut(s) | 182, 560, 983 |
| BfaI | CTAG | 2 cut(s) | 525, 879 |
| BfmI | CTRYAG | 1 cut(s) | 365 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 131, 340 |
| BglII | AGATCT | 1 cut(s) | 826 |
| Bme1390I | CCNGG | 5 cut(s) | 71, 199, 200, 449, 473 |
| BmeT110I | CYCGRG | 1 cut(s) | 198 |
| BmgT120I | GGNCC | 3 cut(s) | 150, 167, 196 |
| BmiI | GGNNCC | 2 cut(s) | 106, 169 |
| BmrFI | CCNGG | 5 cut(s) | 71, 199, 200, 449, 473 |
| BmrI | ACTGGG | 1 cut(s) | 235 |
| BmsI | GCATC | 8 cut(s) | 126, 165, 288, 475, 557, 599, 783, 824 |
| BmuI | ACTGGG | 1 cut(s) | 235 |
| BpiI | GAAGAC | 1 cut(s) | 697 |
| BpmI | CTGGAG | 1 cut(s) | 535 |
| BpuEI | CTTGAG | 1 cut(s) | 1088 |
| BpuMI | CCSGG | 2 cut(s) | 199, 200 |
| Bsa29I | ATCGAT | 1 cut(s) | 483 |
| BsaBI | GATNNNNATC | 1 cut(s) | 856 |
| BsaHI | GRCGYC | 1 cut(s) | 453 |
| BsaJI | CCNNGG | 4 cut(s) | 6, 100, 163, 198 |
| BsaWI | WCCGGW | 2 cut(s) | 155, 1117 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 89, 119, 421, 451 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 205, 472, 991 |
| Bse118I | RCCGGY | 3 cut(s) | 155, 241, 1117 |
| Bse1I | ACTGG | 5 cut(s) | 210, 230, 552, 677, 905 |
| Bse21I | CCTNAGG | 1 cut(s) | 954 |
| Bse3DI | GCAATG | 1 cut(s) | 777 |
| Bse8I | GATNNNNATC | 1 cut(s) | 856 |
| BseBI | CCWGG | 3 cut(s) | 71, 449, 473 |
| BseCI | ATCGAT | 1 cut(s) | 483 |
| BseDI | CCNNGG | 4 cut(s) | 6, 100, 163, 198 |
| BseGI | GGATG | 1 cut(s) | 1000 |
| BseJI | GATNNNNATC | 1 cut(s) | 856 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 205, 472, 991 |
| BseMI | GCAATG | 1 cut(s) | 777 |
| BseMII | CTCAG | 4 cut(s) | 30, 844, 945, 994 |
| BseNI | ACTGG | 5 cut(s) | 210, 230, 552, 677, 905 |
| BsePI | GCGCGC | 1 cut(s) | 217 |
| BseRI | GAGGAG | 2 cut(s) | 47, 82 |
| BseX3I | CGGCCG | 1 cut(s) | 82 |
| BseXI | GCAGC | 8 cut(s) | 44, 90, 126, 351, 524, 527, 530, 533 |
| BseYI | CCCAGC | 2 cut(s) | 142, 456 |
| Bsh1236I | CGCG | 4 cut(s) | 87, 219, 547, 962 |
| Bsh1285I | CGRYCG | 4 cut(s) | 85, 114, 160, 860 |
| BshFI | GGCC | 4 cut(s) | 84, 152, 168, 197 |
| BshTI | ACCGGT | 2 cut(s) | 155, 1117 |
| BshVI | ATCGAT | 1 cut(s) | 483 |
| BsiEI | CGRYCG | 4 cut(s) | 85, 114, 160, 860 |
| BsiHKAI | GWGCWC | 1 cut(s) | 324 |
| BsiHKCI | CYCGRG | 1 cut(s) | 198 |
| BsiSI | CCGG | 5 cut(s) | 156, 199, 242, 340, 1118 |
| BslFI | GGGAC | 1 cut(s) | 28 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 205, 472, 991 |
| BsmAI | GTCTC | 3 cut(s) | 182, 560, 983 |
| BsmBI | CGTCTC | 1 cut(s) | 182 |
| BsmFI | GGGAC | 1 cut(s) | 28 |
| BsmI | GAATGC | 1 cut(s) | 1075 |
| BsnI | GGCC | 4 cut(s) | 84, 152, 168, 197 |
| BsoBI | CYCGRG | 1 cut(s) | 198 |
| Bsp1286I | GDGCHC | 1 cut(s) | 324 |
| Bsp143I | GATC | 5 cut(s) | 336, 348, 432, 826, 857 |
| BspANI | GGCC | 4 cut(s) | 84, 152, 168, 197 |
| BspCNI | CTCAG | 4 cut(s) | 31, 843, 946, 993 |
| BspDI | ATCGAT | 1 cut(s) | 483 |
| BspFNI | CGCG | 4 cut(s) | 87, 219, 547, 962 |
| BspLI | GGNNCC | 2 cut(s) | 106, 169 |
| BspMAI | CTGCAG | 1 cut(s) | 369 |
| BspPI | GGATC | 3 cut(s) | 331, 356, 440 |
| BsrBI | CCGCTC | 2 cut(s) | 55, 214 |
| BsrDI | GCAATG | 1 cut(s) | 777 |
| BsrFI | RCCGGY | 3 cut(s) | 155, 241, 1117 |
| BsrI | ACTGG | 5 cut(s) | 210, 230, 552, 677, 905 |
| BssAI | RCCGGY | 3 cut(s) | 155, 241, 1117 |
| BssECI | CCNNGG | 4 cut(s) | 6, 100, 163, 198 |
| BssHII | GCGCGC | 1 cut(s) | 217 |
| BssMI | GATC | 5 cut(s) | 336, 348, 432, 826, 857 |
| BssNAI | GTATAC | 1 cut(s) | 944 |
| BssNI | GRCGYC | 1 cut(s) | 453 |
| Bst1107I | GTATAC | 1 cut(s) | 944 |
| Bst2UI | CCWGG | 3 cut(s) | 71, 449, 473 |
| Bst4CI | ACNGT | 1 cut(s) | 577 |
| Bst6I | CTCTTC | 1 cut(s) | 1020 |
| BstACI | GRCGYC | 1 cut(s) | 453 |
| BstC8I | GCNNGC | 5 cut(s) | 76, 132, 150, 219, 634 |
| BstDEI | CTNAG | 5 cut(s) | 39, 830, 928, 954, 980 |
| BstDSI | CCRYGG | 1 cut(s) | 163 |
| BstF5I | GGATG | 1 cut(s) | 1000 |
| BstFNI | CGCG | 4 cut(s) | 87, 219, 547, 962 |
| BstHHI | GCGC | 5 cut(s) | 52, 219, 221, 364, 549 |
| BstKTI | GATC | 5 cut(s) | 339, 351, 435, 829, 860 |
| BstMAI | GTCTC | 3 cut(s) | 182, 560, 983 |
| BstMBI | GATC | 5 cut(s) | 336, 348, 432, 826, 857 |
| BstMCI | CGRYCG | 4 cut(s) | 85, 114, 160, 860 |
| BstNI | CCWGG | 3 cut(s) | 71, 449, 473 |
| BstNSI | RCATGY | 2 cut(s) | 738, 1080 |
| BstSCI | CCNGG | 5 cut(s) | 69, 197, 198, 447, 471 |
| BstSFI | CTRYAG | 1 cut(s) | 365 |
| BstUI | CGCG | 4 cut(s) | 87, 219, 547, 962 |
| BstV1I | GCAGC | 8 cut(s) | 44, 90, 126, 351, 524, 527, 530, 533 |
| BstV2I | GAAGAC | 1 cut(s) | 697 |
| BstX2I | RGATCY | 2 cut(s) | 348, 826 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 244 |
| BstYI | RGATCY | 2 cut(s) | 348, 826 |
| BstZ17I | GTATAC | 1 cut(s) | 944 |
| BstZI | CGGCCG | 1 cut(s) | 82 |
| Bsu15I | ATCGAT | 1 cut(s) | 483 |
| Bsu36I | CCTNAGG | 1 cut(s) | 954 |
| BsuRI | GGCC | 4 cut(s) | 84, 152, 168, 197 |
| BsuTUI | ATCGAT | 1 cut(s) | 483 |
| BtgI | CCRYGG | 1 cut(s) | 163 |
| BtgZI | GCGATG | 2 cut(s) | 149, 311 |
| BtsCI | GGATG | 1 cut(s) | 1000 |
| BtsI | GCAGTG | 3 cut(s) | 374, 871, 925 |
| BtsIMutI | CAGTG | 4 cut(s) | 374, 582, 871, 925 |
| Cac8I | GCNNGC | 5 cut(s) | 76, 132, 150, 219, 634 |
| CaiI | CAGNNNCTG | 1 cut(s) | 38 |
| CciNI | GCGGCCGC | 1 cut(s) | 82 |
| CfoI | GCGC | 5 cut(s) | 52, 219, 221, 364, 549 |
| Cfr10I | RCCGGY | 3 cut(s) | 155, 241, 1117 |
| Cfr13I | GGNCC | 3 cut(s) | 150, 167, 196 |
| Cfr9I | CCCGGG | 1 cut(s) | 198 |
| ClaI | ATCGAT | 1 cut(s) | 483 |
| CseI | GACGC | 3 cut(s) | 461, 830, 968 |
| CsiI | ACCWGGT | 1 cut(s) | 471 |
| Csp6I | GTAC | 5 cut(s) | 403, 670, 925, 999, 1093 |
| CspAI | ACCGGT | 2 cut(s) | 155, 1117 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1025, 1060 |
| CviAII | CATG | 7 cut(s) | 47, 259, 317, 380, 735, 771, 1077 |
| CviQI | GTAC | 5 cut(s) | 403, 670, 925, 999, 1093 |
| DdeI | CTNAG | 5 cut(s) | 39, 830, 928, 954, 980 |
| DpnI | GATC | 5 cut(s) | 338, 350, 434, 828, 859 |
| DpnII | GATC | 5 cut(s) | 336, 348, 432, 826, 857 |
| EaeI | YGGCCR | 1 cut(s) | 82 |
| EagI | CGGCCG | 1 cut(s) | 82 |
| Eam1104I | CTCTTC | 1 cut(s) | 1020 |
| EarI | CTCTTC | 1 cut(s) | 1020 |
| EclXI | CGGCCG | 1 cut(s) | 82 |
| Eco52I | CGGCCG | 1 cut(s) | 82 |
| Eco81I | CCTNAGG | 1 cut(s) | 954 |
| Eco88I | CYCGRG | 1 cut(s) | 198 |
| EcoRII | CCWGG | 3 cut(s) | 69, 447, 471 |
| EcoT22I | ATGCAT | 1 cut(s) | 776 |
| Esp3I | CGTCTC | 1 cut(s) | 182 |
| FaeI | CATG | 7 cut(s) | 50, 262, 320, 383, 738, 774, 1080 |
| FaqI | GGGAC | 1 cut(s) | 28 |
| FatI | CATG | 7 cut(s) | 46, 258, 316, 379, 734, 770, 1076 |
| FauI | CCCGC | 4 cut(s) | 74, 130, 141, 177 |
| FblI | GTMKAC | 1 cut(s) | 943 |
| FokI | GGATG | 1 cut(s) | 1007 |
| FspBI | CTAG | 2 cut(s) | 525, 879 |
| GlaI | GCGC | 5 cut(s) | 51, 218, 220, 363, 548 |
| GsaI | CCCAGC | 2 cut(s) | 146, 460 |
| GsuI | CTGGAG | 1 cut(s) | 535 |
| HaeIII | GGCC | 4 cut(s) | 84, 152, 168, 197 |
| HapII | CCGG | 5 cut(s) | 156, 199, 242, 340, 1118 |
| HgaI | GACGC | 3 cut(s) | 461, 830, 968 |
| HhaI | GCGC | 5 cut(s) | 52, 219, 221, 364, 549 |
| Hin1I | GRCGYC | 1 cut(s) | 453 |
| Hin1II | CATG | 7 cut(s) | 50, 262, 320, 383, 738, 774, 1080 |
| Hin6I | GCGC | 5 cut(s) | 50, 217, 219, 362, 547 |
| HinP1I | GCGC | 5 cut(s) | 50, 217, 219, 362, 547 |
| HinfI | GANTC | 4 cut(s) | 11, 41, 89, 901 |
| HpaII | CCGG | 5 cut(s) | 156, 199, 242, 340, 1118 |
| HphI | GGTGA | 1 cut(s) | 650 |
| Hpy166II | GTNNAC | 2 cut(s) | 580, 944 |
| Hpy188I | TCNGA | 4 cut(s) | 10, 97, 429, 820 |
| Hpy188III | TCNNGA | 1 cut(s) | 254 |
| Hpy8I | GTNNAC | 2 cut(s) | 580, 944 |
| Hpy99I | CGWCG | 2 cut(s) | 28, 503 |
| HpyAV | CCTTC | 3 cut(s) | 71, 405, 803 |
| HpyCH4III | ACNGT | 1 cut(s) | 577 |
| HpyCH4IV | ACGT | 1 cut(s) | 664 |
| HpyCH4V | TGCA | 9 cut(s) | 367, 488, 652, 774, 782, 815, 1047, 1073, 1089 |
| HpyF3I | CTNAG | 5 cut(s) | 39, 830, 928, 954, 980 |
| HpySE526I | ACGT | 1 cut(s) | 664 |
| Hsp92I | GRCGYC | 1 cut(s) | 453 |
| Hsp92II | CATG | 7 cut(s) | 50, 262, 320, 383, 738, 774, 1080 |
| HspAI | GCGC | 5 cut(s) | 50, 217, 219, 362, 547 |
| Kzo9I | GATC | 5 cut(s) | 336, 348, 432, 826, 857 |
| LmnI | GCTCC | 5 cut(s) | 60, 110, 554, 664, 887 |
| Lsp1109I | GCAGC | 8 cut(s) | 44, 90, 126, 351, 524, 527, 530, 533 |
| LweI | GCATC | 8 cut(s) | 126, 165, 288, 475, 557, 599, 783, 824 |
| MabI | ACCWGGT | 1 cut(s) | 471 |
| MaeI | CTAG | 2 cut(s) | 525, 879 |
| MaeII | ACGT | 1 cut(s) | 664 |
| MalI | GATC | 5 cut(s) | 338, 350, 434, 828, 859 |
| MbiI | CCGCTC | 2 cut(s) | 55, 214 |
| MboI | GATC | 5 cut(s) | 336, 348, 432, 826, 857 |
| MboII | GAAGA | 8 cut(s) | 6, 453, 518, 638, 697, 830, 881, 1007 |
| MfeI | CAATTG | 1 cut(s) | 933 |
| MflI | RGATCY | 2 cut(s) | 348, 826 |
| MhlI | GDGCHC | 1 cut(s) | 324 |
| MluCI | AATT | 2 cut(s) | 783, 933 |
| MlyI | GAGTC | 2 cut(s) | 50, 83 |
| MmeI | TCCRAC | 2 cut(s) | 120, 865 |
| MnlI | CCTC | 9 cut(s) | 16, 68, 103, 110, 181, 423, 949, 985, 1092 |
| Mph1103I | ATGCAT | 1 cut(s) | 776 |
| MroXI | GAANNNNTTC | 1 cut(s) | 645 |
| MseI | TTAA | 1 cut(s) | 1062 |
| MspA1I | CMGCKG | 2 cut(s) | 35, 81 |
| MspI | CCGG | 5 cut(s) | 156, 199, 242, 340, 1118 |
| MspR9I | CCNGG | 5 cut(s) | 71, 199, 200, 449, 473 |
| MunI | CAATTG | 1 cut(s) | 933 |
| Mva1269I | GAATGC | 1 cut(s) | 1075 |
| MvaI | CCWGG | 3 cut(s) | 71, 449, 473 |
| MvnI | CGCG | 4 cut(s) | 87, 219, 547, 962 |
| NciI | CCSGG | 2 cut(s) | 199, 200 |
| NdeII | GATC | 5 cut(s) | 336, 348, 432, 826, 857 |
| NlaIII | CATG | 7 cut(s) | 50, 262, 320, 383, 738, 774, 1080 |
| NlaIV | GGNNCC | 2 cut(s) | 106, 169 |
| NmeAIII | GCCGAG | 1 cut(s) | 81 |
| NotI | GCGGCCGC | 1 cut(s) | 82 |
| NsiI | ATGCAT | 1 cut(s) | 776 |
| NspI | RCATGY | 2 cut(s) | 738, 1080 |
| PalAI | GGCGCGCC | 1 cut(s) | 217 |
| PauI | GCGCGC | 1 cut(s) | 217 |
| PciI | ACATGT | 1 cut(s) | 1076 |
| PctI | GAATGC | 1 cut(s) | 1075 |
| PdmI | GAANNNNTTC | 1 cut(s) | 645 |
| PfeI | GAWTC | 2 cut(s) | 11, 901 |
| PinAI | ACCGGT | 2 cut(s) | 155, 1117 |
| Ple19I | CGATCG | 1 cut(s) | 860 |
| PleI | GAGTC | 2 cut(s) | 49, 83 |
| PpsI | GAGTC | 2 cut(s) | 49, 83 |
| PscI | ACATGT | 1 cut(s) | 1076 |
| Psp6I | CCWGG | 3 cut(s) | 69, 447, 471 |
| PspFI | CCCAGC | 2 cut(s) | 142, 456 |
| PspGI | CCWGG | 3 cut(s) | 69, 447, 471 |
| PspN4I | GGNNCC | 2 cut(s) | 106, 169 |
| PspPI | GGNCC | 3 cut(s) | 150, 167, 196 |
| PstI | CTGCAG | 1 cut(s) | 369 |
| PstNI | CAGNNNCTG | 1 cut(s) | 38 |
| PsuI | RGATCY | 2 cut(s) | 348, 826 |
| PteI | GCGCGC | 1 cut(s) | 217 |
| PvuI | CGATCG | 1 cut(s) | 860 |
| RsaI | GTAC | 5 cut(s) | 404, 671, 926, 1000, 1094 |
| RsaNI | GTAC | 5 cut(s) | 403, 670, 925, 999, 1093 |
| SaqAI | TTAA | 1 cut(s) | 1062 |
| Sau3AI | GATC | 5 cut(s) | 336, 348, 432, 826, 857 |
| Sau96I | GGNCC | 3 cut(s) | 150, 167, 196 |
| SchI | GAGTC | 2 cut(s) | 50, 83 |
| ScrFI | CCNGG | 5 cut(s) | 71, 199, 200, 449, 473 |
| SduI | GDGCHC | 1 cut(s) | 324 |
| SetI | ASST | 7 cut(s) | 102, 477, 526, 667, 814, 955, 1008 |
| SexAI | ACCWGGT | 1 cut(s) | 471 |
| SfaNI | GCATC | 8 cut(s) | 126, 165, 288, 475, 557, 599, 783, 824 |
| SfcI | CTRYAG | 1 cut(s) | 365 |
| SgsI | GGCGCGCC | 1 cut(s) | 217 |
| SmaI | CCCGGG | 1 cut(s) | 200 |
| SmlI | CTYRAG | 1 cut(s) | 1103 |
| SmoI | CTYRAG | 1 cut(s) | 1103 |
| Sse9I | AATT | 2 cut(s) | 783, 933 |
| SspI | AATATT | 1 cut(s) | 421 |
| SspMI | CTAG | 2 cut(s) | 525, 879 |
| StyD4I | CCNGG | 5 cut(s) | 69, 197, 198, 447, 471 |
| TaaI | ACNGT | 1 cut(s) | 577 |
| TaiI | ACGT | 1 cut(s) | 667 |
| TaqI | TCGA | 5 cut(s) | 173, 477, 483, 856, 860 |
| TasI | AATT | 2 cut(s) | 783, 933 |
| TatI | WGTACW | 2 cut(s) | 669, 1092 |
| TauI | GCSGC | 7 cut(s) | 32, 38, 55, 84, 87, 197, 217 |
| TfiI | GAWTC | 2 cut(s) | 11, 901 |
| Tru1I | TTAA | 1 cut(s) | 1062 |
| Tru9I | TTAA | 1 cut(s) | 1062 |
| TscAI | CASTG | 4 cut(s) | 374, 582, 871, 925 |
| TseI | GCWGC | 8 cut(s) | 32, 78, 139, 364, 512, 515, 518, 521 |
| TspDTI | ATGAA | 2 cut(s) | 519, 1082 |
| TspMI | CCCGGG | 1 cut(s) | 198 |
| TspRI | CASTG | 4 cut(s) | 374, 582, 871, 925 |
| XceI | RCATGY | 2 cut(s) | 738, 1080 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 244, 669 |
| XmaI | CCCGGG | 1 cut(s) | 198 |
| XmiI | GTMKAC | 1 cut(s) | 943 |
| XmnI | GAANNNNTTC | 1 cut(s) | 645 |
| XspI | CTAG | 2 cut(s) | 525, 879 |
| Zsp2I | ATGCAT | 1 cut(s) | 776 |