Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr13

Orthogroup ID

OG0005020

Physical Location & Seq

Genomic Coordinates Forward (+)

34273817 .. 34277117

Gene Structure 3301 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD13G1265500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1410 bp

ATGGGATTTGCCAGCAACGTAGGGAAGTACCAGCTCGGGCGAACGATTGGAGAAGGTACTTTCGCCAAGGTGAAGCTGGCACTCGACAGCACCAATGGCAAGTATGTTGCAATCAAGATCCTGGATAAGCATATGGTCATGCAAACCAATCTCAAGAATCAGGTCCAGAGAGAAATTAGAACAATGAAGCTTCTCAACCACTCCAACATTGTTCGCATTCACGAGGTCATAGGAACAAAGACAAAAATTTACATAGTTATGGAACATGTATCTGGAGGTCAACTCGCAGACAAGATGTTGTATGCCAAAAGATTTAGTGAAGGGGAGGCAAGAAAGCTGTTTCAGCAATTGATTGATGCAATGGACTACTGTCACAACAGAGGTGTCTATCACAGAGATCTAAAGCCTGAAAACTTGCTTCTAGCCAGTAATGGAACGCTGAAGATGTCCGATTTTGGACTCAGCGCACTGCGTAAGCCTGGTGACCTTTTGTCAACAAAATGTGGCTCTCCAAGTTATGTAGCTCCCGAGCTGATCCTGAGTAAGGTGTACGATGGAGCAGCTGCAGATGTTTGGTCTTCTGGAGTGATTCTTTTCGAATTATTAGCTGGTCATCTACCATTTGATGAATCTAGCCTGATGAGCTTATACAAAAAGATATCCAGAGCAGAATACACATTTCCGCAGTGGTTTACACAAGACCAGAAGAAGCTCATCTCCAGAATACTTGATCCAAATCCTAGAACGCGGATAACAATACCAGAGATTATCGAAAATGAATGGTTTCAACAAGATTATGTGCCCACATATGGAAATGATAGTGACGAAAAAATCTACCTTGATGATGTTAATGCCGCATTTGATTCAATTGAGGAGAATGTGGCGGAGACAAAAATTCCAAAATCCTCAAGTTTTATAAATGCATTCCAATTGATAGCCATGTCAAATGATCTCGATCTGTCAGGTCTTTTCGAGGAACAGGATGAGAACAAGCATAAAACAAGGATTGGATCCAAGCATACCATTACTGAAACCATGAAGAAAATAGAAGCTGCTGCAACGGATGCGAGCCTTTCAGTAGCAAGAACAAACAACTTCAGGATGAAAATGCATGCAAAACAGATTATGACTAGATGCTGTAGATCATACATTGACATATCAGCAGAGGTGATTGAAGTTGCTCCCACGAATTGTGTCGTTGAAATATCAAGATCTGCAGGGGAGCTTAGACTGTACAAAGAATTCTGTAAAAGTTTATCAAGTCAGCTGACAGACAAAGCCGCTGCTTCATCACCGAAGCAAGAATCTGAGGCTGTCAACACCGATAGAGAAAGTATCGAAGAAAAAGAACGCTCTGAGGAGACGAATTCCAGAACAATCAAAGACTACCGCGGTTATTCATCGTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005773 GO:0005774 GO:0005829 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006970 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009628 GO:0009651 GO:0009705 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0023052 GO:0031090 GO:0033554 GO:0035556 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071214 GO:0071470 GO:0071472 GO:0071704 GO:0098588 GO:0098805 GO:0104004 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04068 ko04140 ko04150 ko04151 ko04152 ko04211 ko04213 ko04371 ko04530 ko04710 ko04714 ko04910 ko04920 ko04921 ko04922 ko04931 ko04932 ko05410 ko05418 map04068 map04140 map04150 map04151 map04152 map04211 map04213 map04371 map04530 map04710 map04714 map04910 map04920 map04921 map04922 map04931 map04932 map05410 map05418

Pfam Domains

Protein Families

NAF Pkinase

Protein Analysis

470

Amino Acids

52.89

Weight (kDa)

6.82

Isoelectric Point (pI)

43.13

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	10 - 262	2.1e-71	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	11 - 258	6.5e-40	Protein tyrosine and serine/threonine kinase
ABC1	PF03109	38 - 155	5.5e-06	ABC1 atypical kinase-like domain
NAF	PF03822	304 - 361	5.9e-17	NAF domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005020)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G57630 AT5G57630 AT5G57630
fragaria_vesca	FvH4_4g08900 FvH4_4g08900 FvH4_4g08900 FvH4_4g08900 FvH4_4g08900 FvH4_4g08900
malus_domestica	MD13G1265500.v1.1
prunus_persica	Prupe.1G091700_v2.0.a1 Prupe.1G091700_v2.0.a1
pyrus_communis	pycom13g23580
rosa_chinensis	RchiOBHm_Chr4g0403561
rosa_laevigata	RLG00000008968 RLG00000017445
rosa_multiflora	Rmu_sc0007038.1_g000017
rosa_roxburghii	Rroxscaffold_2G00103160 Rroxscaffold_2G00117840 Rroxscaffold_5G00348210
rosa_rugosa	Rorug04G0044300 Rorug04G0044400
rosa_samantha	Rh1CG276800 Rh2CG037600 Rh4AG119500 Rh4BG112600 Rh4CG127500 Rh4DG112200 Rh5CG124600
rosa_wichuraiana	Rw4G009700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	917
AccII	CGCG	2 cut(s)	748, 1392
AciI	CCGC	7 cut(s)	683, 748, 855, 884, 1281, 1390, 1392
AclWI	GGATC	5 cut(s)	112, 529, 725, 1005, 1018
AcsI	RAATTY	4 cut(s)	246, 894, 1241, 1366
AcuI	CTGAAG	2 cut(s)	461, 1081
AfaI	GTAC	4 cut(s)	29, 58, 551, 1235
AfiI	CCNNNNNNNGG	2 cut(s)	544, 809
AflIII	ACRYGT	1 cut(s)	265
AgsI	TTSAA	4 cut(s)	788, 867, 1175, 1202
AhdI	GACNNNNNGTC	1 cut(s)	490
AjnI	CCWGG	2 cut(s)	120, 478
Alw26I	GTCTC	2 cut(s)	881, 1355
AlwI	GGATC	5 cut(s)	112, 529, 725, 1005, 1018
Ama87I	CYCGRG	2 cut(s)	35, 527
ApeKI	GCWGC	5 cut(s)	560, 563, 1052, 1055, 1283
ApoI	RAATTY	4 cut(s)	246, 894, 1241, 1366
Asp700I	GAANNNNTTC	1 cut(s)	783
AspLEI	GCGC	1 cut(s)	467
AspS9I	GGNCC	1 cut(s)	163
AsuHPI	GGTGA	4 cut(s)	82, 494, 1180, 1284
AsuII	TTCGAA	1 cut(s)	597
AvaI	CYCGRG	2 cut(s)	35, 527
AvaII	GGWCC	1 cut(s)	163
BaeGI	GKGCMC	1 cut(s)	804
BamHI	GGATCC	1 cut(s)	1010
BauI	CACGAG	1 cut(s)	221
BbsI	GAAGAC	1 cut(s)	570
BbvI	GCAGC	5 cut(s)	550, 572, 1039, 1042, 1270
BccI	CCATC	1 cut(s)	548
BciT130I	CCWGG	2 cut(s)	122, 480
BcoDI	GTCTC	2 cut(s)	881, 1355
BfaI	CTAG	4 cut(s)	422, 633, 741, 1131
BfmI	CTRYAG	3 cut(s)	564, 1138, 1215
BglII	AGATCT	2 cut(s)	397, 1211
BisI	GCNGC	7 cut(s)	561, 564, 855, 1053, 1056, 1281, 1284
BlsI	GCNGC	7 cut(s)	562, 565, 856, 1054, 1057, 1282, 1285
Bme1390I	CCNGG	2 cut(s)	122, 480
Bme18I	GGWCC	1 cut(s)	163
BmeRI	GACNNNNNGTC	1 cut(s)	490
BmeT110I	CYCGRG	2 cut(s)	35, 527
BmgT120I	GGNCC	1 cut(s)	163
BmiI	GGNNCC	1 cut(s)	1012
BmrFI	CCNGG	2 cut(s)	122, 480
BmsI	GCATC	3 cut(s)	346, 1054, 1124
BoxI	GACNNNNGTC	1 cut(s)	369
BpiI	GAAGAC	1 cut(s)	570
BplI	GAGNNNNNCTC	2 cut(s)	267, 299
BpmI	CTGGAG	3 cut(s)	294, 603, 703
Bpu14I	TTCGAA	1 cut(s)	597
BpuEI	CTTGAG	2 cut(s)	137, 892
BsaBI	GATNNNNATC	2 cut(s)	735, 954
BsaJI	CCNNGG	2 cut(s)	66, 1390
Bsc4I	CCNNNNNNNGG	2 cut(s)	544, 809
Bse1I	ACTGG	1 cut(s)	426
Bse3DI	GCAATG	1 cut(s)	366
Bse8I	GATNNNNATC	2 cut(s)	735, 954
BseBI	CCWGG	2 cut(s)	122, 480
BseDI	CCNNGG	2 cut(s)	66, 1390
BseGI	GGATG	3 cut(s)	988, 1069, 1107
BseJI	GATNNNNATC	2 cut(s)	735, 954
BseLI	CCNNNNNNNGG	2 cut(s)	544, 809
BseMI	GCAATG	1 cut(s)	366
BseMII	CTCAG	4 cut(s)	475, 530, 1299, 1347
BseNI	ACTGG	1 cut(s)	426
BseRI	GAGGAG	2 cut(s)	887, 1373
BseSI	GKGCMC	1 cut(s)	804
BseXI	GCAGC	5 cut(s)	550, 572, 1039, 1042, 1270
Bsh1236I	CGCG	2 cut(s)	748, 1392
BsiHKCI	CYCGRG	2 cut(s)	35, 527
BslI	CCNNNNNNNGG	2 cut(s)	544, 809
BsmAI	GTCTC	2 cut(s)	881, 1355
BsmBI	CGTCTC	1 cut(s)	1355
BsmI	GAATGC	2 cut(s)	216, 923
BsoBI	CYCGRG	2 cut(s)	35, 527
Bsp119I	TTCGAA	1 cut(s)	597
Bsp1286I	GDGCHC	1 cut(s)	804
Bsp1407I	TGTACA	1 cut(s)	1233
Bsp143I	GATC	9 cut(s)	117, 397, 534, 730, 949, 955, 1010, 1142, 1211
BspACI	CCGC	7 cut(s)	683, 748, 855, 884, 1281, 1390, 1392
BspCNI	CTCAG	4 cut(s)	474, 531, 1300, 1348
BspFNI	CGCG	2 cut(s)	748, 1392
BspLI	GGNNCC	1 cut(s)	1012
BspMAI	CTGCAG	2 cut(s)	568, 1219
BspPI	GGATC	5 cut(s)	112, 529, 725, 1005, 1018
BspT104I	TTCGAA	1 cut(s)	597
BsrDI	GCAATG	1 cut(s)	366
BsrGI	TGTACA	1 cut(s)	1233
BsrI	ACTGG	1 cut(s)	426
BssECI	CCNNGG	2 cut(s)	66, 1390
BssMI	GATC	9 cut(s)	117, 397, 534, 730, 949, 955, 1010, 1142, 1211
BssSI	CACGAG	1 cut(s)	221
BssT1I	CCWWGG	1 cut(s)	66
Bst2BI	CACGAG	1 cut(s)	221
Bst2UI	CCWGG	2 cut(s)	122, 480
Bst4CI	ACNGT	2 cut(s)	371, 1233
BstAPI	GCANNNNNTGC	1 cut(s)	1064
BstAUI	TGTACA	1 cut(s)	1233
BstBI	TTCGAA	1 cut(s)	597
BstC8I	GCNNGC	4 cut(s)	13, 78, 1069, 1113
BstDEI	CTNAG	5 cut(s)	461, 539, 1226, 1308, 1356
BstDSI	CCRYGG	1 cut(s)	1390
BstEII	GGTNACC	1 cut(s)	482
BstENI	CCTNNNNNAGG	1 cut(s)	542
BstF5I	GGATG	3 cut(s)	988, 1069, 1107
BstFNI	CGCG	2 cut(s)	748, 1392
BstHHI	GCGC	1 cut(s)	467
BstKTI	GATC	9 cut(s)	120, 400, 537, 733, 952, 958, 1013, 1145, 1214
BstMAI	GTCTC	2 cut(s)	881, 1355
BstMBI	GATC	9 cut(s)	117, 397, 534, 730, 949, 955, 1010, 1142, 1211
BstMWI	GCNNNNNNNGC	4 cut(s)	96, 343, 642, 1064
BstNI	CCWGG	2 cut(s)	122, 480
BstNSI	RCATGY	2 cut(s)	269, 1115
BstPAI	GACNNNNGTC	1 cut(s)	369
BstPI	GGTNACC	1 cut(s)	482
BstSCI	CCNGG	2 cut(s)	120, 478
BstSFI	CTRYAG	3 cut(s)	564, 1138, 1215
BstSLI	GKGCMC	1 cut(s)	804
BstUI	CGCG	2 cut(s)	748, 1392
BstV1I	GCAGC	5 cut(s)	550, 572, 1039, 1042, 1270
BstV2I	GAAGAC	1 cut(s)	570
BstX2I	RGATCY	4 cut(s)	117, 397, 1010, 1211
BstYI	RGATCY	4 cut(s)	117, 397, 1010, 1211
BtgI	CCRYGG	1 cut(s)	1390
BtsCI	GGATG	3 cut(s)	988, 1069, 1107
BtsI	GCAGTG	2 cut(s)	467, 692
BtsIMutI	CAGTG	2 cut(s)	467, 692
Cac8I	GCNNGC	4 cut(s)	13, 78, 1069, 1113
CfoI	GCGC	1 cut(s)	467
Cfr13I	GGNCC	1 cut(s)	163
Cfr42I	CCGCGG	1 cut(s)	1393
Csp6I	GTAC	4 cut(s)	28, 57, 550, 1234
CviAII	CATG	5 cut(s)	139, 266, 940, 1036, 1112
CviQI	GTAC	4 cut(s)	28, 57, 550, 1234
DdeI	CTNAG	5 cut(s)	461, 539, 1226, 1308, 1356
DpnI	GATC	9 cut(s)	119, 399, 536, 732, 951, 957, 1012, 1144, 1213
DpnII	GATC	9 cut(s)	117, 397, 534, 730, 949, 955, 1010, 1142, 1211
DriI	GACNNNNNGTC	1 cut(s)	490
Eam1105I	GACNNNNNGTC	1 cut(s)	490
EciI	GGCGGA	1 cut(s)	899
Eco130I	CCWWGG	1 cut(s)	66
Eco32I	GATATC	1 cut(s)	660
Eco47I	GGWCC	1 cut(s)	163
Eco57I	CTGAAG	2 cut(s)	461, 1081
Eco88I	CYCGRG	2 cut(s)	35, 527
Eco91I	GGTNACC	1 cut(s)	482
EcoNI	CCTNNNNNAGG	1 cut(s)	542
EcoO65I	GGTNACC	1 cut(s)	482
EcoRI	GAATTC	2 cut(s)	1241, 1366
EcoRII	CCWGG	2 cut(s)	120, 478
EcoRV	GATATC	1 cut(s)	660
EcoT14I	CCWWGG	1 cut(s)	66
EcoT22I	ATGCAT	2 cut(s)	925, 1113
ErhI	CCWWGG	1 cut(s)	66
Esp3I	CGTCTC	1 cut(s)	1355
FaeI	CATG	5 cut(s)	142, 269, 943, 1039, 1115
FatI	CATG	5 cut(s)	138, 265, 939, 1035, 1111
FauNDI	CATATG	2 cut(s)	132, 808
Fnu4HI	GCNGC	7 cut(s)	561, 564, 855, 1053, 1056, 1281, 1284
FokI	GGATG	3 cut(s)	995, 1076, 1114
Fsp4HI	GCNGC	7 cut(s)	561, 564, 855, 1053, 1056, 1281, 1284
FspBI	CTAG	4 cut(s)	422, 633, 741, 1131
GlaI	GCGC	1 cut(s)	466
GluI	GCNGC	7 cut(s)	561, 564, 855, 1053, 1056, 1281, 1284
GsuI	CTGGAG	3 cut(s)	294, 603, 703
HhaI	GCGC	1 cut(s)	467
Hin1II	CATG	5 cut(s)	142, 269, 943, 1039, 1115
Hin6I	GCGC	1 cut(s)	465
HinP1I	GCGC	1 cut(s)	465
HincII	GTYRAC	3 cut(s)	281, 495, 1318
HindII	GTYRAC	3 cut(s)	281, 495, 1318
HindIII	AAGCTT	1 cut(s)	188
HinfI	GANTC	6 cut(s)	157, 459, 589, 629, 863, 1304
HphI	GGTGA	4 cut(s)	82, 494, 1180, 1284
Hpy166II	GTNNAC	5 cut(s)	281, 495, 550, 693, 1318
Hpy188I	TCNGA	3 cut(s)	451, 1309, 1357
Hpy8I	GTNNAC	5 cut(s)	281, 495, 550, 693, 1318
HpyAV	CCTTC	2 cut(s)	47, 314
HpyCH4III	ACNGT	2 cut(s)	371, 1233
HpyCH4IV	ACGT	1 cut(s)	18
HpyCH4V	TGCA	9 cut(s)	110, 142, 359, 566, 923, 1058, 1111, 1115, 1217
HpyF10VI	GCNNNNNNNGC	4 cut(s)	96, 343, 642, 1064
HpyF3I	CTNAG	5 cut(s)	461, 539, 1226, 1308, 1356
HpySE526I	ACGT	1 cut(s)	18
Hsp92II	CATG	5 cut(s)	142, 269, 943, 1039, 1115
HspAI	GCGC	1 cut(s)	465
KspI	CCGCGG	1 cut(s)	1393
Kzo9I	GATC	9 cut(s)	117, 397, 534, 730, 949, 955, 1010, 1142, 1211
LmnI	GCTCC	4 cut(s)	529, 557, 1186, 1222
Lsp1109I	GCAGC	5 cut(s)	550, 572, 1039, 1042, 1270
LweI	GCATC	3 cut(s)	346, 1054, 1124
MaeI	CTAG	4 cut(s)	422, 633, 741, 1131
MaeII	ACGT	1 cut(s)	18
MaeIII	GTNAC	3 cut(s)	371, 482, 821
MalI	GATC	9 cut(s)	119, 399, 536, 732, 951, 957, 1012, 1144, 1213
MboI	GATC	9 cut(s)	117, 397, 534, 730, 949, 955, 1010, 1142, 1211
MboII	GAAGA	5 cut(s)	454, 570, 718, 1051, 1352
MfeI	CAATTG	3 cut(s)	347, 867, 929
MflI	RGATCY	4 cut(s)	117, 397, 1010, 1211
MhlI	GDGCHC	1 cut(s)	804
MlyI	GAGTC	1 cut(s)	453
MmeI	TCCRAC	1 cut(s)	228
Mph1103I	ATGCAT	2 cut(s)	925, 1113
MroXI	GAANNNNTTC	1 cut(s)	783
MseI	TTAA	1 cut(s)	849
MslI	CAYNNNNRTG	1 cut(s)	257
MspA1I	CMGCKG	4 cut(s)	563, 1267, 1283, 1392
MspR9I	CCNGG	2 cut(s)	122, 480
MunI	CAATTG	3 cut(s)	347, 867, 929
Mva1269I	GAATGC	2 cut(s)	216, 923
MvaI	CCWGG	2 cut(s)	122, 480
MvnI	CGCG	2 cut(s)	748, 1392
MwoI	GCNNNNNNNGC	4 cut(s)	96, 343, 642, 1064
NdeI	CATATG	2 cut(s)	132, 808
NdeII	GATC	9 cut(s)	117, 397, 534, 730, 949, 955, 1010, 1142, 1211
NlaIII	CATG	5 cut(s)	142, 269, 943, 1039, 1115
NlaIV	GGNNCC	1 cut(s)	1012
NmuCI	GTSAC	3 cut(s)	371, 482, 821
NsiI	ATGCAT	2 cut(s)	925, 1113
NspI	RCATGY	2 cut(s)	269, 1115
NspV	TTCGAA	1 cut(s)	597
PaeI	GCATGC	1 cut(s)	1115
PciI	ACATGT	1 cut(s)	265
PctI	GAATGC	2 cut(s)	216, 923
PdmI	GAANNNNTTC	1 cut(s)	783
PfeI	GAWTC	5 cut(s)	157, 589, 629, 863, 1304
PfoI	TCCNGGA	1 cut(s)	120
PkrI	GCNGC	7 cut(s)	562, 565, 856, 1054, 1057, 1282, 1285
PleI	GAGTC	1 cut(s)	453
PpsI	GAGTC	1 cut(s)	453
PscI	ACATGT	1 cut(s)	265
PshAI	GACNNNNGTC	1 cut(s)	369
PsiI	TTATAA	1 cut(s)	917
Psp6I	CCWGG	2 cut(s)	120, 478
PspEI	GGTNACC	1 cut(s)	482
PspGI	CCWGG	2 cut(s)	120, 478
PspN4I	GGNNCC	1 cut(s)	1012
PspPI	GGNCC	1 cut(s)	163
PstI	CTGCAG	2 cut(s)	568, 1219
PsuI	RGATCY	4 cut(s)	117, 397, 1010, 1211
PvuII	CAGCTG	2 cut(s)	563, 1267
RsaI	GTAC	4 cut(s)	29, 58, 551, 1235
RsaNI	GTAC	4 cut(s)	28, 57, 550, 1234
RseI	CAYNNNNRTG	1 cut(s)	257
SacII	CCGCGG	1 cut(s)	1393
SaqAI	TTAA	1 cut(s)	849
SatI	GCNGC	7 cut(s)	561, 564, 855, 1053, 1056, 1281, 1284
Sau3AI	GATC	9 cut(s)	117, 397, 534, 730, 949, 955, 1010, 1142, 1211
Sau96I	GGNCC	1 cut(s)	163
SchI	GAGTC	1 cut(s)	453
ScrFI	CCNGG	2 cut(s)	122, 480
SduI	GDGCHC	1 cut(s)	804
SfaNI	GCATC	3 cut(s)	346, 1054, 1124
SfcI	CTRYAG	3 cut(s)	564, 1138, 1215
Sfr303I	CCGCGG	1 cut(s)	1393
SfuI	TTCGAA	1 cut(s)	597
SgrBI	CCGCGG	1 cut(s)	1393
SinI	GGWCC	1 cut(s)	163
SmiMI	CAYNNNNRTG	1 cut(s)	257
SmlI	CTYRAG	2 cut(s)	152, 907
SmoI	CTYRAG	2 cut(s)	152, 907
SphI	GCATGC	1 cut(s)	1115
SsiI	CCGC	7 cut(s)	683, 748, 855, 884, 1281, 1390, 1392
SspMI	CTAG	4 cut(s)	422, 633, 741, 1131
StyD4I	CCNGG	2 cut(s)	120, 478
StyI	CCWWGG	1 cut(s)	66
TaaI	ACNGT	2 cut(s)	371, 1233
TaiI	ACGT	1 cut(s)	21
TaqI	TCGA	6 cut(s)	84, 597, 771, 954, 972, 1338
TatI	WGTACW	1 cut(s)	1233
TauI	GCSGC	2 cut(s)	857, 1283
TfiI	GAWTC	5 cut(s)	157, 589, 629, 863, 1304
Tru1I	TTAA	1 cut(s)	849
Tru9I	TTAA	1 cut(s)	849
TscAI	CASTG	2 cut(s)	474, 692
TseFI	GTSAC	3 cut(s)	371, 482, 821
TseI	GCWGC	5 cut(s)	560, 563, 1052, 1055, 1283
Tsp45I	GTSAC	3 cut(s)	371, 482, 821
TspDTI	ATGAA	7 cut(s)	200, 642, 792, 1052, 1118, 1278, 1389
TspGWI	ACGGA	1 cut(s)	1076
TspRI	CASTG	2 cut(s)	474, 692
VpaK11BI	GGWCC	1 cut(s)	163
XagI	CCTNNNNNAGG	1 cut(s)	542
XapI	RAATTY	4 cut(s)	246, 894, 1241, 1366
XceI	RCATGY	2 cut(s)	269, 1115
XcmI	CCANNNNNNNNNTGG	1 cut(s)	73
XmnI	GAANNNNTTC	1 cut(s)	783
XspI	CTAG	4 cut(s)	422, 633, 741, 1131
Zsp2I	ATGCAT	2 cut(s)	925, 1113

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.