Rh4BG112600

Non-specific serine threonine protein kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4B
Physical Location & Seq
Reverse (-)
19069199 .. 19072047
2849 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4BG112600.1

Sequence Viewer

Length: 1410 bp
ATGGGATTTGCCAACAACATAGGCAAGTACCAGCTGGGGCGGACGATCGGAGAAGGTACTTTTGCCAAGGTGAAGCTGGCACTCGACAGCACCAATGGAAAGTATGTTGCCATCAAGATCCTCGATAAGCATATGGTCATGGAAACCAATCTCATGAATCAGGTGCAGAGAGAAATTAGAACAATGAAGCTTCTAAATCACTCCAACATTGTGCGCATACATGAGGTTATTGGTACAAAGACAAAAATCTACATAGTAATGGAATATGTATCTGGGGGACAACTCTCAGACAAATTGTTGTATTCCAAAACATTAAGTGAAGGGGAGGCAAGAAAGCTTGTTCAGCAATTGATAGATGCAGTGGACTACTGTCACAACAAAGGTGTATATCACAGAGATCTAAAGCCAGAAAACTTGCTTTTGACCAGTAATGGAGAACTCAAAATATCTGATTTTGGACTTAGCGCATTGCGTAAGCCTGGTGATTTGTTGTCAACTAAATGTGGTTCTCCAAGCTACGTAGCTCCTGAGCTACTTGTAAATAAGGGCTATGATGGAGCAGCTGCAGATGTTTGGTCTTGTGGAGTGATTCTTTTCGAATTACTTGCTGGTCATCTGCCATTTGATGACTCTAACCTGATGAATTTGTACAAAAAGATATCCAGAGCAGAATACAGATTTCCACATTGGTTTACGGAAAGCCAAAAGAAGCTGATCTCAGGAATATTTGATCCGAATCCCAAAAGGCGACTAACAATACCAGAAATTATCGAAAATGAATGGTTCCAAAAGGATTACATACCTACATGTGGAAATGATAGTGACGAGAAAATCTACTTAGATGATGTCAATGCTGCATTTGATTCAATCGAGGAAAATGTCAAGGAGACCAAAATTCCCAAATCATCAAGTTTTATAAATGCATTCCAATTGATAGCCATGTCAAATGATCTGGATTTATCAGGTCTTTTTGAGGAACAGTATAACAATAAGCAGAAAATAAGGCTTGGATCCCAGCACACAATCAATGAAACCATGAAGAAAATAGAAGCTGCTGCAATGGATGTGAGTCTTTCAGTAGCAAGAACAAACAACTTTAAGATCAAAATGCATGCGAAACAAGGGATGACTAGATGTTGTAGATCATATATTGATATGTCAGCAGAGGTGATCGAAGTGGCTCCCGCACATTGTGTTGTAGAAATATCAAGATCCGCAGGGGAGCTTGGACCATACAACGAATTCTGTAAGAGTCTAACAAGCCAGCTGACAGAGGAATCAGGTGATTCATCACAAATGCAAGAGTCTGAGGTACACCACATCGAAAGCAAAAGTATTCAAGAAAGTGAAGGGTCCGAGAAGACAAAATCCACGAGAATCGATGATCACCGTGGTTATTCATCTTCTTGA

Protein Analysis

469

Amino Acids

52.73

Weight (kDa)

6.15

Isoelectric Point (pI)

41.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 10 - 262 1.4e-74 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 11 - 258 5.4e-41 Protein tyrosine and serine/threonine kinase
ABC1 PF03109 38 - 155 7.2e-09 ABC1 atypical kinase-like domain
NAF PF03822 304 - 361 1.3e-16 NAF domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 917
Acc16I TGCGCA 1 cut(s) 215
AciI CCGC 3 cut(s) 40, 1185, 1215
AclWI GGATC 5 cut(s) 112, 725, 1005, 1018, 1206
AcsI RAATTY 3 cut(s) 643, 894, 1241
AdeI CACNNNGTG 1 cut(s) 1193
AfaI GTAC 5 cut(s) 29, 58, 235, 650, 1314
AfiI CCNNNNNNNGG 1 cut(s) 809
AflIII ACRYGT 1 cut(s) 806
AgsI TTSAA 2 cut(s) 867, 1340
AjnI CCWGG 1 cut(s) 478
Alw26I GTCTC 1 cut(s) 881
AlwI GGATC 5 cut(s) 112, 725, 1005, 1018, 1206
ApeKI GCWGC 5 cut(s) 560, 563, 854, 1052, 1055
ApoI RAATTY 3 cut(s) 643, 894, 1241
AspLEI GCGC 2 cut(s) 216, 467
AspS9I GGNCC 2 cut(s) 1229, 1353
AsuHPI GGTGA 5 cut(s) 82, 494, 1180, 1295, 1379
AsuII TTCGAA 1 cut(s) 597
AvaII GGWCC 2 cut(s) 1229, 1353
BamHI GGATCC 1 cut(s) 1010
BauI CACGAG 1 cut(s) 1372
BbsI GAAGAC 1 cut(s) 1367
BbvI GCAGC 5 cut(s) 550, 572, 841, 1039, 1042
BccI CCATC 2 cut(s) 119, 548
BcgI CGANNNNNNTGC 2 cut(s) 587, 621
BciT130I CCWGG 1 cut(s) 480
BclI TGATCA 1 cut(s) 1384
BcoDI GTCTC 1 cut(s) 881
BfaI CTAG 1 cut(s) 1131
BfmI CTRYAG 1 cut(s) 564
BglII AGATCT 1 cut(s) 397
BisI GCNGC 5 cut(s) 561, 564, 855, 1053, 1056
BlsI GCNGC 5 cut(s) 562, 565, 856, 1054, 1057
Bme1390I CCNGG 1 cut(s) 480
Bme18I GGWCC 2 cut(s) 1229, 1353
BmgT120I GGNCC 2 cut(s) 1229, 1353
BmiI GGNNCC 4 cut(s) 785, 1012, 1182, 1354
BmrFI CCNGG 1 cut(s) 480
BmsI GCATC 1 cut(s) 346
BoxI GACNNNNGTC 1 cut(s) 369
BpiI GAAGAC 1 cut(s) 1367
Bpu10I CCTNAGC 1 cut(s) 528
Bpu14I TTCGAA 1 cut(s) 597
Bsa29I ATCGAT 1 cut(s) 1380
BsaAI YACGTR 1 cut(s) 520
BsaBI GATNNNNATC 1 cut(s) 735
BsaI GGTCTC 1 cut(s) 881
BsaJI CCNNGG 2 cut(s) 66, 1390
Bsc4I CCNNNNNNNGG 1 cut(s) 809
Bse1I ACTGG 1 cut(s) 426
Bse3DI GCAATG 2 cut(s) 467, 1065
Bse8I GATNNNNATC 1 cut(s) 735
BseBI CCWGG 1 cut(s) 480
BseCI ATCGAT 1 cut(s) 1380
BseDI CCNNGG 2 cut(s) 66, 1390
BseGI GGATG 2 cut(s) 1069, 1131
BseJI GATNNNNATC 1 cut(s) 735
BseLI CCNNNNNNNGG 1 cut(s) 809
BseMI GCAATG 2 cut(s) 467, 1065
BseMII CTCAG 4 cut(s) 300, 519, 732, 1299
BseNI ACTGG 1 cut(s) 426
BseXI GCAGC 5 cut(s) 550, 572, 841, 1039, 1042
BseYI CCCAGC 2 cut(s) 34, 1014
BsgI GTGCAG 1 cut(s) 185
Bsh1285I CGRYCG 1 cut(s) 48
BshVI ATCGAT 1 cut(s) 1380
BsiEI CGRYCG 1 cut(s) 48
BslFI GGGAC 1 cut(s) 291
BslI CCNNNNNNNGG 1 cut(s) 809
BsmAI GTCTC 1 cut(s) 881
BsmFI GGGAC 1 cut(s) 291
BsmI GAATGC 1 cut(s) 923
Bso31I GGTCTC 1 cut(s) 881
Bsp119I TTCGAA 1 cut(s) 597
Bsp1407I TGTACA 1 cut(s) 648
BspACI CCGC 3 cut(s) 40, 1185, 1215
BspCNI CTCAG 4 cut(s) 299, 520, 731, 1300
BspDI ATCGAT 1 cut(s) 1380
BspHI TCATGA 1 cut(s) 153
BspLI GGNNCC 4 cut(s) 785, 1012, 1182, 1354
BspMAI CTGCAG 1 cut(s) 568
BspPI GGATC 5 cut(s) 112, 725, 1005, 1018, 1206
BspT104I TTCGAA 1 cut(s) 597
BspTNI GGTCTC 1 cut(s) 881
BsrDI GCAATG 2 cut(s) 467, 1065
BsrGI TGTACA 1 cut(s) 648
BsrI ACTGG 1 cut(s) 426
BssECI CCNNGG 2 cut(s) 66, 1390
BssSI CACGAG 1 cut(s) 1372
BssT1I CCWWGG 1 cut(s) 66
Bst2BI CACGAG 1 cut(s) 1372
Bst2UI CCWGG 1 cut(s) 480
Bst4CI ACNGT 3 cut(s) 371, 981, 1391
BstAUI TGTACA 1 cut(s) 648
BstBAI YACGTR 1 cut(s) 520
BstBI TTCGAA 1 cut(s) 597
BstC8I GCNNGC 3 cut(s) 78, 1113, 1265
BstDEI CTNAG 6 cut(s) 286, 461, 528, 718, 838, 1308
BstDSI CCRYGG 1 cut(s) 1390
BstF5I GGATG 2 cut(s) 1069, 1131
BstHHI GCGC 2 cut(s) 216, 467
BstMAI GTCTC 1 cut(s) 881
BstMCI CGRYCG 1 cut(s) 48
BstMWI GCNNNNNNNGC 1 cut(s) 343
BstNI CCWGG 1 cut(s) 480
BstNSI RCATGY 2 cut(s) 810, 1115
BstPAI GACNNNNGTC 1 cut(s) 369
BstSCI CCNGG 1 cut(s) 478
BstSFI CTRYAG 1 cut(s) 564
BstSNI TACGTA 1 cut(s) 520
BstV1I GCAGC 5 cut(s) 550, 572, 841, 1039, 1042
BstV2I GAAGAC 1 cut(s) 1367
BstX2I RGATCY 4 cut(s) 117, 397, 1010, 1211
BstYI RGATCY 4 cut(s) 117, 397, 1010, 1211
Bsu15I ATCGAT 1 cut(s) 1380
BsuTUI ATCGAT 1 cut(s) 1380
BtgI CCRYGG 1 cut(s) 1390
BtsCI GGATG 2 cut(s) 1069, 1131
BtsI GCAGTG 1 cut(s) 366
BtsIMutI CAGTG 1 cut(s) 366
Cac8I GCNNGC 3 cut(s) 78, 1113, 1265
CciI TCATGA 1 cut(s) 153
CfoI GCGC 2 cut(s) 216, 467
Cfr13I GGNCC 2 cut(s) 1229, 1353
ClaI ATCGAT 1 cut(s) 1380
Csp6I GTAC 5 cut(s) 28, 57, 234, 649, 1313
CviAII CATG 7 cut(s) 139, 154, 221, 807, 940, 1036, 1112
CviQI GTAC 5 cut(s) 28, 57, 234, 649, 1313
DdeI CTNAG 6 cut(s) 286, 461, 528, 718, 838, 1308
DraIII CACNNNGTG 1 cut(s) 1193
EciI GGCGGA 1 cut(s) 55
Eco105I TACGTA 1 cut(s) 520
Eco130I CCWWGG 1 cut(s) 66
Eco31I GGTCTC 1 cut(s) 881
Eco32I GATATC 1 cut(s) 660
Eco47I GGWCC 2 cut(s) 1229, 1353
EcoRI GAATTC 1 cut(s) 1241
EcoRII CCWGG 1 cut(s) 478
EcoRV GATATC 1 cut(s) 660
EcoT14I CCWWGG 1 cut(s) 66
EcoT22I ATGCAT 2 cut(s) 925, 1113
ErhI CCWWGG 1 cut(s) 66
FaeI CATG 7 cut(s) 142, 157, 224, 810, 943, 1039, 1115
FaqI GGGAC 1 cut(s) 291
FatI CATG 7 cut(s) 138, 153, 220, 806, 939, 1035, 1111
FauI CCCGC 1 cut(s) 1192
FauNDI CATATG 1 cut(s) 132
FbaI TGATCA 1 cut(s) 1384
Fnu4HI GCNGC 5 cut(s) 561, 564, 855, 1053, 1056
FokI GGATG 2 cut(s) 1076, 1138
Fsp4HI GCNGC 5 cut(s) 561, 564, 855, 1053, 1056
FspAI RTGCGCAY 1 cut(s) 215
FspBI CTAG 1 cut(s) 1131
FspI TGCGCA 1 cut(s) 215
GlaI GCGC 2 cut(s) 215, 466
GluI GCNGC 5 cut(s) 561, 564, 855, 1053, 1056
GsaI CCCAGC 2 cut(s) 38, 1018
HhaI GCGC 2 cut(s) 216, 467
Hin1II CATG 7 cut(s) 142, 157, 224, 810, 943, 1039, 1115
Hin6I GCGC 2 cut(s) 214, 465
HinP1I GCGC 2 cut(s) 214, 465
HincII GTYRAC 1 cut(s) 495
HindII GTYRAC 1 cut(s) 495
HindIII AAGCTT 2 cut(s) 188, 335
HphI GGTGA 5 cut(s) 82, 494, 1180, 1295, 1379
Hpy166II GTNNAC 4 cut(s) 364, 495, 693, 1315
Hpy188I TCNGA 6 cut(s) 50, 289, 451, 735, 1309, 1357
Hpy188III TCNNGA 9 cut(s) 115, 154, 527, 663, 720, 953, 1209, 1340, 1407
Hpy8I GTNNAC 4 cut(s) 364, 495, 693, 1315
HpyAV CCTTC 3 cut(s) 47, 314, 1343
HpyCH4III ACNGT 3 cut(s) 371, 981, 1391
HpyCH4IV ACGT 1 cut(s) 519
HpyCH4V TGCA 8 cut(s) 166, 359, 566, 857, 923, 1058, 1111, 1300
HpyF10VI GCNNNNNNNGC 1 cut(s) 343
HpyF3I CTNAG 6 cut(s) 286, 461, 528, 718, 838, 1308
HpySE526I ACGT 1 cut(s) 519
Hsp92II CATG 7 cut(s) 142, 157, 224, 810, 943, 1039, 1115
HspAI GCGC 2 cut(s) 214, 465
Ksp22I TGATCA 1 cut(s) 1384
LmnI GCTCC 4 cut(s) 529, 557, 1186, 1222
Lsp1109I GCAGC 5 cut(s) 550, 572, 841, 1039, 1042
LweI GCATC 1 cut(s) 346
MaeI CTAG 1 cut(s) 1131
MaeII ACGT 1 cut(s) 519
MaeIII GTNAC 2 cut(s) 371, 821
MboII GAAGA 3 cut(s) 1051, 1372, 1395
MfeI CAATTG 2 cut(s) 347, 929
MflI RGATCY 4 cut(s) 117, 397, 1010, 1211
MluCI AATT 9 cut(s) 174, 293, 347, 599, 643, 765, 894, 929, 1241
MlyI GAGTC 4 cut(s) 623, 1078, 1261, 1313
MmeI TCCRAC 1 cut(s) 228
MnlI CCTC 8 cut(s) 131, 217, 319, 865, 967, 1159, 1267, 1303
Mph1103I ATGCAT 2 cut(s) 925, 1113
MseI TTAA 2 cut(s) 314, 1098
MslI CAYNNNNRTG 1 cut(s) 257
MspA1I CMGCKG 3 cut(s) 34, 563, 1267
MspR9I CCNGG 1 cut(s) 480
MunI CAATTG 2 cut(s) 347, 929
Mva1269I GAATGC 1 cut(s) 923
MvaI CCWGG 1 cut(s) 480
MwoI GCNNNNNNNGC 1 cut(s) 343
NdeI CATATG 1 cut(s) 132
NlaIII CATG 7 cut(s) 142, 157, 224, 810, 943, 1039, 1115
NlaIV GGNNCC 4 cut(s) 785, 1012, 1182, 1354
NmuCI GTSAC 2 cut(s) 371, 821
NsbI TGCGCA 1 cut(s) 215
NsiI ATGCAT 2 cut(s) 925, 1113
NspI RCATGY 2 cut(s) 810, 1115
NspV TTCGAA 1 cut(s) 597
PaeI GCATGC 1 cut(s) 1115
PagI TCATGA 1 cut(s) 153
PciI ACATGT 1 cut(s) 806
PctI GAATGC 1 cut(s) 923
PfeI GAWTC 7 cut(s) 157, 589, 736, 863, 1277, 1286, 1377
PkrI GCNGC 5 cut(s) 562, 565, 856, 1054, 1057
Ple19I CGATCG 1 cut(s) 48
PleI GAGTC 4 cut(s) 623, 1077, 1260, 1312
PpsI GAGTC 4 cut(s) 623, 1077, 1260, 1312
Ppu21I YACGTR 1 cut(s) 520
PscI ACATGT 1 cut(s) 806
PshAI GACNNNNGTC 1 cut(s) 369
PsiI TTATAA 1 cut(s) 917
Psp6I CCWGG 1 cut(s) 478
PspFI CCCAGC 2 cut(s) 34, 1014
PspGI CCWGG 1 cut(s) 478
PspN4I GGNNCC 4 cut(s) 785, 1012, 1182, 1354
PspPI GGNCC 2 cut(s) 1229, 1353
PstI CTGCAG 1 cut(s) 568
PsuI RGATCY 4 cut(s) 117, 397, 1010, 1211
PvuI CGATCG 1 cut(s) 48
PvuII CAGCTG 3 cut(s) 34, 563, 1267
RsaI GTAC 5 cut(s) 29, 58, 235, 650, 1314
RsaNI GTAC 5 cut(s) 28, 57, 234, 649, 1313
RseI CAYNNNNRTG 1 cut(s) 257
SaqAI TTAA 2 cut(s) 314, 1098
SatI GCNGC 5 cut(s) 561, 564, 855, 1053, 1056
Sau96I GGNCC 2 cut(s) 1229, 1353
SchI GAGTC 4 cut(s) 623, 1078, 1261, 1313
ScrFI CCNGG 1 cut(s) 480
SfaNI GCATC 1 cut(s) 346
SfcI CTRYAG 1 cut(s) 564
SfuI TTCGAA 1 cut(s) 597
SinI GGWCC 2 cut(s) 1229, 1353
SmiMI CAYNNNNRTG 1 cut(s) 257
SnaBI TACGTA 1 cut(s) 520
SphI GCATGC 1 cut(s) 1115
Sse9I AATT 9 cut(s) 174, 293, 347, 599, 643, 765, 894, 929, 1241
SsiI CCGC 3 cut(s) 40, 1185, 1215
SspI AATATT 1 cut(s) 726
SspMI CTAG 1 cut(s) 1131
StyD4I CCNGG 1 cut(s) 478
StyI CCWWGG 1 cut(s) 66
TaaI ACNGT 3 cut(s) 371, 981, 1391
TaiI ACGT 1 cut(s) 522
TaqI TCGA 8 cut(s) 84, 123, 597, 771, 870, 1173, 1323, 1380
TasI AATT 9 cut(s) 174, 293, 347, 599, 643, 765, 894, 929, 1241
TatI WGTACW 1 cut(s) 648
TfiI GAWTC 7 cut(s) 157, 589, 736, 863, 1277, 1286, 1377
Tru1I TTAA 2 cut(s) 314, 1098
Tru9I TTAA 2 cut(s) 314, 1098
TscAI CASTG 1 cut(s) 366
TseFI GTSAC 2 cut(s) 371, 821
TseI GCWGC 5 cut(s) 560, 563, 854, 1052, 1055
Tsp45I GTSAC 2 cut(s) 371, 821
TspDTI ATGAA 8 cut(s) 170, 200, 656, 792, 1044, 1052, 1278, 1389
TspGWI ACGGA 1 cut(s) 710
TspRI CASTG 1 cut(s) 366
VpaK11BI GGWCC 2 cut(s) 1229, 1353
XapI RAATTY 3 cut(s) 643, 894, 1241
XceI RCATGY 2 cut(s) 810, 1115
XcmI CCANNNNNNNNNTGG 1 cut(s) 73
XspI CTAG 1 cut(s) 1131
Zsp2I ATGCAT 2 cut(s) 925, 1113
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.