MD13G1280100.v1.1

The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr13
Physical Location & Seq
Forward (+)
39593682 .. 39601264
7583 bp
Loading structure...
UTR
Exon/CDS
Intron
MD13G1280100.v1.1.491

Sequence Viewer

Length: 2844 bp
ATGGAGAAATCTTGTAGTCTGCTTGTTCACTTTGATAAAGGGACACCTGCAATTGCTAATGAAATCAAGGAATCTCTCGAGGGCAATGACGTGGATGCAAAGATTGATGCAATGAAAAAGGCAATCATGCTTTTGTTGAATGGTGAAACGTTACCTCAACTTTTTATTACAATTGTCAGATATGTTTTGCCTTCTGAAGACCACACCGTCCAAAAGTTGTTGCTTCTATATTTGGAAATAATTGACAAAACTGATCAAAAGGGTAGGGTCTTGCCTGAAATGATTTTAATATGCCAAAATTTGAGGAACAACCTACAGCACCCCAATGAGTATATTCGTGGTGTAACTTTGAGGTTTCTTTGCCGATTGAATGAGGCTGAAATAGTTGAGCCCTTAATCCCTTCTGTTTTGCAAAATTTGGAGCATCGGCATCCTTATATTAGAAGAAATGCTATATTAGCTGTGATGTCTATATATAAGCTACCAAATGGGGAGCAACTCTTGGTTGATGCACCTGAAATGATTGAGAAGATTCTTTCTACAGAGCAGGATCAATCTGCTAAGAGGAATGCATTTCTCATGCTCTTTACTTGTGCCCAGGAACGTGCAGTTAATTACCTTTTGACCAATGTTGATAGGGTGTCTGAATGGGGTGAATTGTTGCAGATGATTGTGTTAGAGCTGATACGAAAAGTGTGTAGAACAAACCGTGGAGAGAAGGGGAGGTACATTAAGATCATTATATCTTTGCTGAATGCGCCTTCAACTGCGGTTGTATATGAATGTGCTGGGACACTTGTTTCCTTGTCGTATGCTCCTACTGCTATTAGAGCTGCTGCCAATACCTACTGTCAGCTGCTTCTTTCTCAGAGTGACAACAATGTGAAGCTTATTGTTCTTGATCGACTGACCGAGCTAAAGTCTTCTCATAGGGAAGTTGTGGCTGATATGTTCATGGACGTGCTTAGGGCACTTTCTAGTCCAAATCTTGACATCAGGAGGAAGACCCTAGACATTGTTCTTGACTTGGTTGCTCACAAGAGCATCAATGAGGTTGTTCTTACTTTGAAAAAGGAAGTGGTTAAGACTCAGAATGGCGAGCTAGAAAAGAATGGTGAATACAGGCAGATGCTTATTCAAGCCATTCATTCTTGTGCAATAAAGTTCCCAGAAGTTGCGAGCACAGTGGTACATCTGTTGATGGATTTCTTGGGAGACAGCAATGTTGCTTCCGCTGTTGATGTGGTTATTTTTGTCCAAGAGATAATAGAAACCAACCCTAAATTGAGGGTATCTATAATAACAAGGCTTTTGGACACTTTCTACCAAATCCGAGCATCACGGGTTTGTTCTTGTGCCCTTTGGATTATTGGAGAATATTGTCTGTCACTTTCTGAAGTTGAGAGTGGAATTGCAACAATTAAACAGTGCCTTGGAGAATTGCCCTTTTTCTCAGTTTCAGAAGAAGAAAGTAATGATTCTTCAAAAAAGTTTCCACAACTGAACTCCATGACCGTGTCTTCTAAAAGACCAGCTATTCTTGCTGATGGAACTTATGCCACTCAGAGTGCTGCATCTGAAACTGTTTTCTCCCATCCTACCGTTGTTCAAGGATCCTTAGCATCTGGGAACTTGAGATCCCTGCTTCTCAGTGGTGACTTCTTCCTTGGAGCAGTTGTTGCATGCACTCTGACCAAGCTTGTCCTGAGATTGGAAGAGGTCCAACCATCAAAAGTTGAAGTGAATAAAACATCTTCACAAGCACTGTTGATAGTTGTCTCCATGCTGCAATTAGGACACTCTCCAGTTCTTCCACATCCAATTGACAGTGATTCTTATGATAGGATTGTCCTTTGCATAAGGTTGCTATGCAACACTGGTGATGAGATCAGAAAAATATGGCTGAAATCTTGCCGTCAAAGTTTTGTTGACATGCTTTCAGAAAAACAATTAAGGGAGACAGAAGAGATAAAAGCAAAGTCTCTGATTTCTCATGCACAACCAGACGACCTTATTGACTTTTACCATTTAAAGAGCAGGAAGGGTATGAGCCAACTGGAACTGGAAGATGAGGTTCAAGATGATTTAAAACGTGCTACAGGAGAGTTTGTCAAAGACGGGGATGATGCAAACAAGCTTAATCGAATCATCCAACTCACTGGATTTAGCGACCCAGTGTATGCCGAAGCATATGTGACTGTTCATCATTATGATATTGTCCTTGATGTCACCGTTATCAATCGAACCAAGGAGACCTTACAGAACTTGTGCTTGGAGTTGGCAACCATGGGTGATCTTAAGCTTGTTGAGCGGCCACAGAATTATACTCTAGCTCCTGAATCTAGTAAGCAAATAAAGGCTAATATCAAGGTGTCGTCAACTGAGACTGGAGTCATATTTGGAAACATTGTTTATGAGACCTCGAATGTGCATGAGCGTACAGTTGTTGTCCTCAATGATATTCATATTGACATTATGGACTACATCTCTCCTGCTGTTTGTAGTGATGGAGCTTTCAGGACCATGTGGGCAGAGTTTGAATGGGAGAACAAGGTGGCTGTCAACACTATAATTCAAGATGAGAAGGAATTTCTTGACCATATTATGAAATCAACTAACATGAAGTGCCTCACTGCACCATCGGCACTGGATGGTGAGTGCGGATTCCTGGCAGCCAACTTGTATGCAAAGAGTTTGTTTGGGGAGGATGCCTTGGTGAATGTGAGCATTGAAAAGCAAACAGATGGAAAGCTTAGCGGCTATATCCGGATAAGGAGCAAGACCCAAGGAATTGCTCTCAGTTTGGGAGATAAGATTACACTCAAGCAGAAGGGAGGCAGTTAA

Protein Analysis

948

Amino Acids

105.89

Weight (kDa)

5.62

Isoelectric Point (pI)

40.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Adaptin_N PF01602 19 - 466 3.4e-93 Adaptin N terminal region
Coatamer_beta_C PF07718 668 - 806 3.3e-56 Coatomer beta C-terminal region
Coatomer_b_Cpla PF14806 812 - 939 1.5e-56 Coatomer beta subunit appendage platform
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 55
AasI GACNNNNNNGTC 1 cut(s) 206
Acc36I ACCTGC 1 cut(s) 55
AccBSI CCGCTC 1 cut(s) 2311
AccIII TCCGGA 1 cut(s) 2766
AciI CCGC 5 cut(s) 770, 1233, 2311, 2661, 2757
AclI AACGTT 1 cut(s) 149
AclWI GGATC 4 cut(s) 558, 1608, 1621, 1632
AcoI YGGCCR 1 cut(s) 2312
AcsI RAATTY 3 cut(s) 298, 415, 2588
AcuI CTGAAG 2 cut(s) 216, 1416
AfaI GTAC 3 cut(s) 728, 1191, 2440
AfiI CCNNNNNNNGG 1 cut(s) 1711
AflII CTTAAG 1 cut(s) 2297
AjiI CACGTC 2 cut(s) 91, 961
AjnI CCWGG 2 cut(s) 597, 2667
AjuI GAANNNNNNNTTGG 2 cut(s) 2255, 2287
AloI GAACNNNNNNTCC 2 cut(s) 1622, 1654
Alw21I GWGCWC 1 cut(s) 1184
Alw26I GTCTC 7 cut(s) 1209, 1783, 1952, 1986, 2246, 2378, 2411
AlwI GGATC 4 cut(s) 558, 1608, 1621, 1632
Ama87I CYCGRG 1 cut(s) 77
Aor13HI TCCGGA 1 cut(s) 2766
AoxI GGCC 1 cut(s) 2312
ApeKI GCWGC 6 cut(s) 833, 836, 856, 1571, 1786, 2672
ApoI RAATTY 3 cut(s) 298, 415, 2588
AspLEI GCGC 1 cut(s) 760
AspS9I GGNCC 2 cut(s) 1720, 2520
AsuHPI GGTGA 9 cut(s) 155, 665, 1127, 1667, 1892, 2221, 2303, 2666, 2728
AvaI CYCGRG 1 cut(s) 77
AvaII GGWCC 2 cut(s) 1720, 2520
BaeGI GKGCMC 3 cut(s) 598, 973, 1360
BaeI ACNNNNGTAYC 2 cut(s) 1181, 1214
BamHI GGATCC 1 cut(s) 1613
BanII GRGCYC 1 cut(s) 393
BarI GAAGNNNNNNTAC 4 cut(s) 710, 742, 1465, 1497
BbsI GAAGAC 4 cut(s) 204, 915, 1010, 1512
Bbv12I GWGCWC 1 cut(s) 1184
BbvI GCAGC 6 cut(s) 820, 823, 843, 1558, 1773, 2684
BccI CCATC 8 cut(s) 1195, 1541, 1602, 1735, 2501, 2645, 2647, 2738
BceAI ACGGC 1 cut(s) 1899
BciT130I CCWGG 2 cut(s) 599, 2669
BclI TGATCA 1 cut(s) 253
BcoDI GTCTC 7 cut(s) 1209, 1783, 1952, 1986, 2246, 2378, 2411
BfaI CTAG 5 cut(s) 978, 1010, 1103, 2330, 2343
BfmI CTRYAG 3 cut(s) 314, 540, 2097
BfrI CTTAAG 1 cut(s) 2297
BfuAI ACCTGC 1 cut(s) 55
BisI GCNGC 8 cut(s) 834, 837, 857, 1572, 1787, 2312, 2673, 2758
BlpI GCTNAGC 1 cut(s) 2753
BlsI GCNGC 8 cut(s) 835, 838, 858, 1573, 1788, 2313, 2674, 2759
Bme1390I CCNGG 2 cut(s) 599, 2669
Bme18I GGWCC 2 cut(s) 1720, 2520
BmeT110I CYCGRG 1 cut(s) 77
BmgBI CACGTC 2 cut(s) 91, 961
BmgT120I GGNCC 2 cut(s) 1720, 2520
BmiI GGNNCC 1 cut(s) 1615
BmrFI CCNGG 2 cut(s) 599, 2669
BmrI ACTGGG 1 cut(s) 2168
BmuI ACTGGG 1 cut(s) 2168
BoxI GACNNNNGTC 1 cut(s) 2390
BpiI GAAGAC 4 cut(s) 204, 915, 1010, 1512
BpmI CTGGAG 2 cut(s) 1788, 2409
Bpu10I CCTNAGC 2 cut(s) 965, 1618
Bpu1102I GCTNAGC 1 cut(s) 2753
BpuEI CTTGAG 2 cut(s) 1654, 2807
BsaI GGTCTC 2 cut(s) 2246, 2411
BsaJI CCNNGG 8 cut(s) 597, 709, 1432, 1666, 2247, 2286, 2712, 2785
BsaWI WCCGGW 1 cut(s) 2766
BsaXI ACNNNNNCTCC 6 cut(s) 1662, 1692, 2094, 2124, 2317, 2347
Bsc4I CCNNNNNNNGG 1 cut(s) 1711
Bse1I ACTGG 8 cut(s) 1805, 1882, 2061, 2067, 2164, 2174, 2392, 2652
Bse3DI GCAATG 3 cut(s) 91, 117, 1228
BseAI TCCGGA 1 cut(s) 2766
BseBI CCWGG 2 cut(s) 599, 2669
BseDI CCNNGG 8 cut(s) 597, 709, 1432, 1666, 2247, 2286, 2712, 2785
BseGI GGATG 8 cut(s) 100, 430, 1594, 1816, 2128, 2148, 2656, 2713
BseLI CCNNNNNNNGG 1 cut(s) 1711
BseMI GCAATG 3 cut(s) 91, 117, 1228
BseMII CTCAG 8 cut(s) 881, 1103, 1467, 1577, 1663, 1697, 2373, 2812
BseNI ACTGG 8 cut(s) 1805, 1882, 2061, 2067, 2164, 2174, 2392, 2652
BseSI GKGCMC 3 cut(s) 598, 973, 1360
BseXI GCAGC 6 cut(s) 820, 823, 843, 1558, 1773, 2684
BseYI CCCAGC 1 cut(s) 788
BsgI GTGCAG 2 cut(s) 627, 2619
BshFI GGCC 1 cut(s) 2314
BsiHKAI GWGCWC 1 cut(s) 1184
BsiHKCI CYCGRG 1 cut(s) 77
BsiSI CCGG 1 cut(s) 2767
BslFI GGGAC 2 cut(s) 55, 805
BslI CCNNNNNNNGG 1 cut(s) 1711
BsmAI GTCTC 7 cut(s) 1209, 1783, 1952, 1986, 2246, 2378, 2411
BsmFI GGGAC 2 cut(s) 55, 805
BsmI GAATGC 2 cut(s) 574, 760
BsnI GGCC 1 cut(s) 2314
Bso31I GGTCTC 2 cut(s) 2246, 2411
BsoBI CYCGRG 1 cut(s) 77
Bsp1286I GDGCHC 5 cut(s) 393, 598, 973, 1184, 1360
Bsp13I TCCGGA 1 cut(s) 2766
Bsp143I GATC 8 cut(s) 253, 550, 735, 901, 1613, 1637, 1887, 2293
Bsp1720I GCTNAGC 1 cut(s) 2753
Bsp19I CCATGG 1 cut(s) 2286
BspACI CCGC 5 cut(s) 770, 1233, 2311, 2661, 2757
BspANI GGCC 1 cut(s) 2314
BspCNI CTCAG 8 cut(s) 880, 1102, 1466, 1576, 1662, 1698, 2374, 2811
BspEI TCCGGA 1 cut(s) 2766
BspLI GGNNCC 1 cut(s) 1615
BspMI ACCTGC 1 cut(s) 55
BspPI GGATC 4 cut(s) 558, 1608, 1621, 1632
BspTI CTTAAG 1 cut(s) 2297
BspTNI GGTCTC 2 cut(s) 2246, 2411
BsrBI CCGCTC 1 cut(s) 2311
BsrDI GCAATG 3 cut(s) 91, 117, 1228
BsrI ACTGG 8 cut(s) 1805, 1882, 2061, 2067, 2164, 2174, 2392, 2652
BssECI CCNNGG 8 cut(s) 597, 709, 1432, 1666, 2247, 2286, 2712, 2785
BssMI GATC 8 cut(s) 253, 550, 735, 901, 1613, 1637, 1887, 2293
BssT1I CCWWGG 6 cut(s) 1432, 1666, 2247, 2286, 2712, 2785
Bst2UI CCWGG 2 cut(s) 599, 2669
Bst6I CTCTTC 2 cut(s) 1710, 1959
BstAFI CTTAAG 1 cut(s) 2297
BstAPI GCANNNNNTGC 1 cut(s) 1679
BstC8I GCNNGC 3 cut(s) 1100, 1180, 1684
BstDSI CCRYGG 2 cut(s) 709, 2286
BstF5I GGATG 8 cut(s) 100, 430, 1594, 1816, 2128, 2148, 2656, 2713
BstHHI GCGC 1 cut(s) 760
BstKTI GATC 8 cut(s) 256, 553, 738, 904, 1616, 1640, 1890, 2296
BstMAI GTCTC 7 cut(s) 1209, 1783, 1952, 1986, 2246, 2378, 2411
BstMBI GATC 8 cut(s) 253, 550, 735, 901, 1613, 1637, 1887, 2293
BstMWI GCNNNNNNNGC 8 cut(s) 458, 757, 821, 830, 1541, 1679, 2308, 2642
BstNI CCWGG 2 cut(s) 599, 2669
BstNSI RCATGY 2 cut(s) 1686, 1936
BstPAI GACNNNNGTC 1 cut(s) 2390
BstSCI CCNGG 2 cut(s) 597, 2667
BstSFI CTRYAG 3 cut(s) 314, 540, 2097
BstSLI GKGCMC 3 cut(s) 598, 973, 1360
BstV1I GCAGC 6 cut(s) 820, 823, 843, 1558, 1773, 2684
BstV2I GAAGAC 4 cut(s) 204, 915, 1010, 1512
BstX2I RGATCY 2 cut(s) 1613, 1637
BstXI CCANNNNNNTGG 1 cut(s) 2159
BstYI RGATCY 2 cut(s) 1613, 1637
BsuRI GGCC 1 cut(s) 2314
BtgI CCRYGG 2 cut(s) 709, 2286
BtrI CACGTC 2 cut(s) 91, 961
BtsCI GGATG 8 cut(s) 100, 430, 1594, 1816, 2128, 2148, 2656, 2713
BtsI GCAGTG 1 cut(s) 2631
BveI ACCTGC 1 cut(s) 55
Cac8I GCNNGC 3 cut(s) 1100, 1180, 1684
CfoI GCGC 1 cut(s) 760
Cfr13I GGNCC 2 cut(s) 1720, 2520
Csp6I GTAC 3 cut(s) 727, 1190, 2439
CviQI GTAC 3 cut(s) 727, 1190, 2439
DpnI GATC 8 cut(s) 255, 552, 737, 903, 1615, 1639, 1889, 2295
DpnII GATC 8 cut(s) 253, 550, 735, 901, 1613, 1637, 1887, 2293
DraI TTTAAA 2 cut(s) 2031, 2088
DrdI GACNNNNNNGTC 1 cut(s) 206
DseDI GACNNNNNNGTC 1 cut(s) 206
EaeI YGGCCR 1 cut(s) 2312
Eam1104I CTCTTC 2 cut(s) 1710, 1959
EarI CTCTTC 2 cut(s) 1710, 1959
Eco130I CCWWGG 6 cut(s) 1432, 1666, 2247, 2286, 2712, 2785
Eco24I GRGCYC 1 cut(s) 393
Eco31I GGTCTC 2 cut(s) 2246, 2411
Eco47I GGWCC 2 cut(s) 1720, 2520
Eco57I CTGAAG 2 cut(s) 216, 1416
Eco88I CYCGRG 1 cut(s) 77
EcoRII CCWGG 2 cut(s) 597, 2667
EcoT14I CCWWGG 6 cut(s) 1432, 1666, 2247, 2286, 2712, 2785
EcoT22I ATGCAT 1 cut(s) 574
EcoT38I GRGCYC 1 cut(s) 393
ErhI CCWWGG 6 cut(s) 1432, 1666, 2247, 2286, 2712, 2785
FalI AAGNNNNNCTT 2 cut(s) 2240, 2272
FaqI GGGAC 2 cut(s) 55, 805
FauNDI CATATG 1 cut(s) 2191
FbaI TGATCA 1 cut(s) 253
Fnu4HI GCNGC 8 cut(s) 834, 837, 857, 1572, 1787, 2312, 2673, 2758
FokI GGATG 8 cut(s) 107, 417, 1581, 1803, 2135, 2135, 2663, 2720
FriOI GRGCYC 1 cut(s) 393
Fsp4HI GCNGC 8 cut(s) 834, 837, 857, 1572, 1787, 2312, 2673, 2758
FspBI CTAG 5 cut(s) 978, 1010, 1103, 2330, 2343
GlaI GCGC 1 cut(s) 759
GluI GCNGC 8 cut(s) 834, 837, 857, 1572, 1787, 2312, 2673, 2758
GsaI CCCAGC 1 cut(s) 792
GsuI CTGGAG 2 cut(s) 1788, 2409
HaeIII GGCC 1 cut(s) 2314
HapII CCGG 1 cut(s) 2767
HhaI GCGC 1 cut(s) 760
Hin6I GCGC 1 cut(s) 758
HinP1I GCGC 1 cut(s) 758
HincII GTYRAC 3 cut(s) 1930, 2379, 2563
HindII GTYRAC 3 cut(s) 1930, 2379, 2563
HindIII AAGCTT 5 cut(s) 887, 1697, 2135, 2300, 2750
HinfI GANTC 9 cut(s) 71, 532, 1087, 1478, 1832, 2145, 2339, 2391, 2664
HpaII CCGG 1 cut(s) 2767
HphI GGTGA 9 cut(s) 155, 665, 1127, 1667, 1892, 2221, 2303, 2666, 2728
Hpy166II GTNNAC 4 cut(s) 28, 1930, 2379, 2563
Hpy8I GTNNAC 4 cut(s) 28, 1930, 2379, 2563
HpyAV CCTTC 7 cut(s) 201, 411, 712, 771, 2035, 2578, 2824
HpyCH4IV ACGT 5 cut(s) 90, 149, 604, 960, 2092
HpyF10VI GCNNNNNNNGC 8 cut(s) 458, 757, 821, 830, 1541, 1679, 2308, 2642
HpySE526I ACGT 5 cut(s) 90, 149, 604, 960, 2092
HspAI GCGC 1 cut(s) 758
Kpn2I TCCGGA 1 cut(s) 2766
Ksp22I TGATCA 1 cut(s) 253
Kzo9I GATC 8 cut(s) 253, 550, 735, 901, 1613, 1637, 1887, 2293
LmnI GCTCC 7 cut(s) 421, 493, 820, 1670, 2338, 2510, 2775
Lsp1109I GCAGC 6 cut(s) 820, 823, 843, 1558, 1773, 2684
MaeI CTAG 5 cut(s) 978, 1010, 1103, 2330, 2343
MaeII ACGT 5 cut(s) 90, 149, 604, 960, 2092
MaeIII GTNAC 7 cut(s) 150, 343, 872, 1386, 1655, 2194, 2227
MalI GATC 8 cut(s) 255, 552, 737, 903, 1615, 1639, 1889, 2295
MbiI CCGCTC 1 cut(s) 2311
MboI GATC 8 cut(s) 253, 550, 735, 901, 1613, 1637, 1887, 2293
MfeI CAATTG 3 cut(s) 51, 171, 1821
MflI RGATCY 2 cut(s) 1613, 1637
MhlI GDGCHC 5 cut(s) 393, 598, 973, 1184, 1360
MlyI GAGTC 2 cut(s) 1081, 2400
MmeI TCCRAC 2 cut(s) 1747, 2176
Mph1103I ATGCAT 1 cut(s) 574
MroI TCCGGA 1 cut(s) 2766
MslI CAYNNNNRTG 5 cut(s) 324, 959, 1152, 1514, 2208
MspA1I CMGCKG 2 cut(s) 856, 1235
MspCI CTTAAG 1 cut(s) 2297
MspI CCGG 1 cut(s) 2767
MspR9I CCNGG 2 cut(s) 599, 2669
MunI CAATTG 3 cut(s) 51, 171, 1821
Mva1269I GAATGC 2 cut(s) 574, 760
MvaI CCWGG 2 cut(s) 599, 2669
MwoI GCNNNNNNNGC 8 cut(s) 458, 757, 821, 830, 1541, 1679, 2308, 2642
NcoI CCATGG 1 cut(s) 2286
NdeI CATATG 1 cut(s) 2191
NdeII GATC 8 cut(s) 253, 550, 735, 901, 1613, 1637, 1887, 2293
NlaIV GGNNCC 1 cut(s) 1615
NmuCI GTSAC 5 cut(s) 872, 1386, 1655, 2194, 2227
NsiI ATGCAT 1 cut(s) 574
NspI RCATGY 2 cut(s) 1686, 1936
PaeI GCATGC 1 cut(s) 1686
PaeR7I CTCGAG 1 cut(s) 77
PaqCI CACCTGC 1 cut(s) 55
PctI GAATGC 2 cut(s) 574, 760
PfeI GAWTC 7 cut(s) 71, 532, 1478, 1832, 2145, 2339, 2664
PflFI GACNNNGTC 1 cut(s) 1516
PkrI GCNGC 8 cut(s) 835, 838, 858, 1573, 1788, 2313, 2674, 2759
PleI GAGTC 2 cut(s) 1081, 2399
PpsI GAGTC 2 cut(s) 1081, 2399
PshAI GACNNNNGTC 1 cut(s) 2390
Psp1406I AACGTT 1 cut(s) 149
Psp6I CCWGG 2 cut(s) 597, 2667
PspFI CCCAGC 1 cut(s) 788
PspGI CCWGG 2 cut(s) 597, 2667
PspN4I GGNNCC 1 cut(s) 1615
PspPI GGNCC 2 cut(s) 1720, 2520
PsuI RGATCY 2 cut(s) 1613, 1637
PsyI GACNNNGTC 1 cut(s) 1516
PvuII CAGCTG 1 cut(s) 856
RsaI GTAC 3 cut(s) 728, 1191, 2440
RsaNI GTAC 3 cut(s) 727, 1190, 2439
RseI CAYNNNNRTG 5 cut(s) 324, 959, 1152, 1514, 2208
SatI GCNGC 8 cut(s) 834, 837, 857, 1572, 1787, 2312, 2673, 2758
Sau3AI GATC 8 cut(s) 253, 550, 735, 901, 1613, 1637, 1887, 2293
Sau96I GGNCC 2 cut(s) 1720, 2520
SchI GAGTC 2 cut(s) 1081, 2400
ScrFI CCNGG 2 cut(s) 599, 2669
SduI GDGCHC 5 cut(s) 393, 598, 973, 1184, 1360
SfcI CTRYAG 3 cut(s) 314, 540, 2097
Sfr274I CTCGAG 1 cut(s) 77
SinI GGWCC 2 cut(s) 1720, 2520
SlaI CTCGAG 1 cut(s) 77
SmiMI CAYNNNNRTG 5 cut(s) 324, 959, 1152, 1514, 2208
SmlI CTYRAG 4 cut(s) 77, 1633, 2297, 2822
SmoI CTYRAG 4 cut(s) 77, 1633, 2297, 2822
SphI GCATGC 1 cut(s) 1686
SsiI CCGC 5 cut(s) 770, 1233, 2311, 2661, 2757
SspI AATATT 1 cut(s) 1379
SspMI CTAG 5 cut(s) 978, 1010, 1103, 2330, 2343
StyD4I CCNGG 2 cut(s) 597, 2667
StyI CCWWGG 6 cut(s) 1432, 1666, 2247, 2286, 2712, 2785
TaiI ACGT 5 cut(s) 93, 152, 607, 963, 2095
TaqI TCGA 5 cut(s) 78, 904, 2143, 2242, 2423
TaqII GACCGA 1 cut(s) 926
TauI GCSGC 2 cut(s) 2314, 2760
TfiI GAWTC 7 cut(s) 71, 532, 1478, 1832, 2145, 2339, 2664
TseFI GTSAC 5 cut(s) 872, 1386, 1655, 2194, 2227
TseI GCWGC 6 cut(s) 833, 836, 856, 1571, 1786, 2672
Tsp45I GTSAC 5 cut(s) 872, 1386, 1655, 2194, 2227
TspDTI ATGAA 9 cut(s) 75, 128, 795, 943, 1136, 2192, 2453, 2621, 2636
Tth111I GACNNNGTC 1 cut(s) 1516
Vha464I CTTAAG 1 cut(s) 2297
VpaK11BI GGWCC 2 cut(s) 1720, 2520
XapI RAATTY 3 cut(s) 298, 415, 2588
XceI RCATGY 2 cut(s) 1686, 1936
XhoI CTCGAG 1 cut(s) 77
XspI CTAG 5 cut(s) 978, 1010, 1103, 2330, 2343
Zsp2I ATGCAT 1 cut(s) 574
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.