Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2B

Orthogroup ID

OG0000969

Physical Location & Seq

Genomic Coordinates Forward (+)

68856084 .. 68862974

Gene Structure 6891 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2BG488500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2199 bp

ATGACGGAGAAGTCATGCACGCTCCTGGTCCACTTCGACAAGGGCACGCCGGCCCTTGCCAACGAGATCAAAGAAGCTCTCGAAGGAAACGACGTCGAATCCAAGATCGAAGCCCTCAAGCAAGCAATCATGCTCTTGCTCAACGGCGACACCATTCCCCAGCTCTTCATCACCATTATCCGCTACGTCCTTCCCTCCGAGGACCACACCGTCCAGAAGCTTCTCCTCCTCTACCTCGAGATCATTGACAAGAAAGACTCCAGAGGCAAGGTCCTGCCGGAGATGATCCTCATCTGCCAGAACCTCCGCAACAATCTCCAGAGCCCTAACGAGTACATCCGCGGCGTCACGCTCCGGTTCCTCTGCCGGTTGAACGAGTCCGAGATCATCGAGCCGTTGATCCCTTCGATTCTGGCCAACCTGGAGCACCGCCACCCGTTCGTTCGACGAAACGCCGTCAGCGCAGTCATGTCTGTGTATAGGCTTCCGCACGGTGAGCAAATGCTGGTGGATGCGCCGGAGATTATCGATCGGTTCTTGGCTTCCGAGCATGATCCTTCTAGTAAGCGAAACGCGTTTCTTATGCTGTTTAATTGTGCGCAGGATAGAGCCGTCAGCTATTTGTTTTCTCATATCGATAGGATTGCTGATTGGGGCGAGCAGCTCCAGATGGTTGTGTTGGAATTGATTAGGAAGGTTTGTAGAGTCAATAAGGGTGAGAAGGGGAAGTACATTAAGGTCATTATATCATTGCTTAATGCTCAGTCCAGTGCTGTTGTTTACGAGTGTGCCAATACGCTTGTGTCTTTATCGTCTGCCCCGACTGCGATTCGGGCTGCAGCCAATACGTATTGTCAGTTGTTATTATCGCAGAGTGATAACAATGTGAAGTTGATTGTGCTCGATAGGATTAATGAGCTTAAGTCTTCGCATAAGGAGATTCTGGTTGAGTTGGTTATGGATGTGCTGAGGGTACTTTCGAGCCCAAATCTTGATATTAGGAGGAAAACACTTGATATTGTTCTTGAGTTGATTACTCCGAGAAATATTGATGAGGTTGTGATGATGTTGAAGAAGGAGGTCGTCAAGACTCAGAGTGGTGAGCTTGAGAAGAATGGGGAATACAGGCAGATGCTGGTGCAAGCTATATATTCATGTGCAGTTAAGTTTCCAGAGGTGGCGAGCACAGTGGTGCATCCTTTGATGGATTTCTTGGGCGATACTAATGTGGCTTCAGCCTTGGATGTGGCTATTTTTGTGCGTGAGATAATTGAAACCAATCCCAAGTTGCGTGTTTCAATAATAATGAGGCTGTTGGACACTTTCTACCAGATTCGGACTTCCAGGGTGTGTACTTATGCTCTTTGGATTATTGGGGAGTATTGTCTGTCACTTTCTGAGGTTGAGAGTGGGATTGCAACCATTAAGCAGTGTCTTGGGGAGCTCCCATTTTACACCGCTTCTGAGGAAAGCGAGGCGCAAGATGTTTCAAAGAATTCTCAGGTTGTAAGCTCGTCGACTGTCTCTTCCAGAAGACCTGTGGTTCTTGCAGATGGGACCTATGCTACCCAGTCTGCTGCACTGGAAACTGCTATGTCTGCACCTCTCCTTGTTCAAGGATCATTGGTGGCTTCTGTAGGGAACTTGAGATCGTTGATTCTCTCTGGTGACTTTTTCCTCGAGTCAGTTGTGGCATGCACACTGACAAAGCTTGTTTTGAGATTAGAAGAGGTTCAGCCTTCAAAAGTTGAAGTGAACAAGGCAACTACACAAGCTTTGTTAATCATGGTCTCTATGCTTCAACTGGGTCAATCATCGGCCCTTCCACATCCAATTGATAATGATTCTCATGATAGAATTGTTCTTTGCATCCGTTTACTATGCAATAAAGGTGAAGAAGTAAAGAGGATATGGCTGAAATCTTGTCGAGAGAGTTTTGTTAAAATGCTTGAAGATAAGAAGCACCGGGAAGCAGAGGAGACTAGAGCCATGGCTCAGATATCAAATGCACAGCCGGATGACCTAATTGATTTCTACCATCTAAAGAGCAAAAAGGTAAGGCTGCACTGTTTTTCTTGTCTCTTCCATGCTGTAAGATTACATGTTCTAAGAACTGTTTGGTTGTGTTTCTTTTTATTTTTTTCTGTTTTGTTTTTTATGTTTTTGGGTTTTGAGACAAGGATTTTTTATTTGGTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005798 GO:0005829 GO:0005911 GO:0006810 GO:0006888 GO:0006890 GO:0006891 GO:0008150 GO:0009506 GO:0012505 GO:0012506 GO:0016020 GO:0016192 GO:0030054 GO:0030117 GO:0030120 GO:0030126 GO:0030135 GO:0030137 GO:0030659 GO:0030660 GO:0030662 GO:0030663 GO:0031090 GO:0031410 GO:0031982 GO:0032991 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044431 GO:0044433 GO:0044444 GO:0044446 GO:0044464 GO:0046907 GO:0048193 GO:0048475 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0055044 GO:0097708 GO:0098588 GO:0098796 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Adaptin_N Coatamer_beta_C Coatomer_b_Cpla

Protein Analysis

732

Amino Acids

82.64

Weight (kDa)

6.5

Isoelectric Point (pI)

47.0

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Adaptin_N	PF01602	21 - 523	2.7e-93	Adaptin N terminal region
Cnd1	PF12717	113 - 265	1.5e-06	non-SMC mitotic condensation complex subunit 1

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000969)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G31480 AT4G31480 AT4G31480 AT4G31480 AT4G31480 AT4G31480 AT4G31480 AT4G31480 AT4G31480 AT4G31490 AT4G31490 AT4G31490
fragaria_vesca	FvH4_4g12700 FvH4_4g12700 FvH4_4g12700 FvH4_6g37230 FvH4_6g37230 FvH4_6g37230
malus_domestica	MD04G1023700.v1.1 MD09G1159400.v1.1 MD13G1280100.v1.1 MD17G1145600.v1.1
prunus_persica	Prupe.3G018300_v2.0.a1 Prupe.3G018400_v2.0.a1
pyrus_communis	pycom04g02030 pycom09g07780 pycom09g18330 pycom13g29300 pycom15g32330 pycom15g32340 pycom17g13850
rosa_chinensis	RchiOBHm_Chr2g0149941 RchiOBHm_Chr2g0149961 RchiOBHm_Chr2g0149991 RchiOBHm_Chr4g0411591
rosa_laevigata	RLG00000008343 RLG00000020457 RLG00000020458
rosa_multiflora	Rmu_sc0001899.1_g000002 Rmu_sc0006550.1_g000008
rosa_roxburghii	Rroxscaffold_2G00097530 Rroxscaffold_2G00097540 Rroxscaffold_5G00356170
rosa_rugosa	Rorug02G0417300 Rorug04G0107800
rosa_samantha	Rh2AG476800 Rh2AG476900 Rh2AG477100 Rh2BG488500 Rh2BG488600 Rh2CG462500 Rh2CG462600 Rh2CG462800 Rh2DG497600 Rh2DG497700 Rh4AG169200 Rh4BG166100 Rh4CG180900 Rh4DG163500
rosa_wichuraiana	Rw2G038870 Rw2G038880 Rw2G038900 Rw4G014060

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	10, 209
AatII	GACGTC	1 cut(s)	96
Acc16I	TGCGCA	1 cut(s)	600
AccI	GTMKAC	1 cut(s)	1517
AccII	CGCG	2 cut(s)	342, 575
AciI	CCGC	7 cut(s)	181, 307, 340, 342, 430, 488, 1458
AclWI	GGATC	4 cut(s)	280, 394, 548, 1627
AcoI	YGGCCR	1 cut(s)	414
AcsI	RAATTY	1 cut(s)	1495
AcuI	CTGAAG	1 cut(s)	1218
AcyI	GRCGYC	2 cut(s)	93, 345
AfaI	GTAC	4 cut(s)	335, 731, 975, 1354
AflII	CTTAAG	1 cut(s)	920
AflIII	ACRYGT	2 cut(s)	573, 2101
AjnI	CCWGG	3 cut(s)	24, 420, 1343
AleI	CACNNNNGTG	1 cut(s)	1190
Alw21I	GWGCWC	4 cut(s)	429, 903, 1187, 1446
Alw26I	GTCTC	5 cut(s)	1528, 1795, 1973, 2084, 2168
AlwI	GGATC	4 cut(s)	280, 394, 548, 1627
AlwNI	CAGNNNCTG	1 cut(s)	1135
Ama87I	CYCGRG	2 cut(s)	236, 1679
AoxI	GGCC	3 cut(s)	51, 414, 1818
ApeKI	GCWGC	5 cut(s)	661, 836, 839, 1577, 2062
ApoI	RAATTY	1 cut(s)	1495
AseI	ATTAAT	1 cut(s)	912
Asp700I	GAANNNNTTC	1 cut(s)	1731
AspLEI	GCGC	4 cut(s)	464, 517, 601, 1480
AspS9I	GGNCC	6 cut(s)	28, 52, 202, 271, 1557, 1819
AsuC2I	CCSGG	1 cut(s)	1967
AsuHPI	GGTGA	6 cut(s)	163, 506, 728, 1112, 1679, 1904
AvaI	CYCGRG	2 cut(s)	236, 1679
AvaII	GGWCC	4 cut(s)	28, 202, 271, 1557
BaeGI	GKGCMC	1 cut(s)	47
BaeI	ACNNNNGTAYC	2 cut(s)	1212, 1245
BalI	TGGCCA	1 cut(s)	416
BanII	GRGCYC	3 cut(s)	326, 986, 1446
BarI	GAAGNNNNNNTAC	2 cut(s)	713, 745
BbsI	GAAGAC	2 cut(s)	918, 1540
Bbv12I	GWGCWC	4 cut(s)	429, 903, 1187, 1446
BbvCI	CCTCAGC	1 cut(s)	968
BbvI	GCAGC	5 cut(s)	673, 823, 851, 1564, 2049
BccI	CCATC	4 cut(s)	664, 1198, 1547, 2046
BceAI	ACGGC	4 cut(s)	160, 379, 440, 596
BcgI	CGANNNNNNTGC	2 cut(s)	626, 660
BciT130I	CCWGG	3 cut(s)	26, 422, 1345
BcnI	CCSGG	1 cut(s)	1967
BcoDI	GTCTC	5 cut(s)	1528, 1795, 1973, 2084, 2168
BfaI	CTAG	2 cut(s)	561, 1983
BfmI	CTRYAG	2 cut(s)	837, 1635
BfrI	CTTAAG	1 cut(s)	920
BisI	GCNGC	6 cut(s)	343, 662, 837, 840, 1578, 2063
BlsI	GCNGC	6 cut(s)	344, 663, 838, 841, 1579, 2064
Bme1390I	CCNGG	4 cut(s)	26, 422, 1345, 1967
Bme18I	GGWCC	4 cut(s)	28, 202, 271, 1557
BmeT110I	CYCGRG	2 cut(s)	236, 1679
BmgT120I	GGNCC	6 cut(s)	28, 52, 202, 271, 1557, 1819
BmiI	GGNNCC	2 cut(s)	359, 1558
BmrFI	CCNGG	4 cut(s)	26, 422, 1345, 1967
BmrI	ACTGGG	2 cut(s)	1564, 1814
BmsI	GCATC	4 cut(s)	502, 1122, 1204, 1878
BmuI	ACTGGG	2 cut(s)	1564, 1814
BpiI	GAAGAC	2 cut(s)	918, 1540
BpmI	CTGGAG	4 cut(s)	244, 302, 443, 650
Bpu10I	CCTNAGC	1 cut(s)	968
BpuEI	CTTGAG	4 cut(s)	101, 1046, 1127, 1666
BpuMI	CCSGG	1 cut(s)	1967
Bsa29I	ATCGAT	2 cut(s)	528, 636
BsaAI	YACGTR	1 cut(s)	849
BsaBI	GATNNNNATC	1 cut(s)	290
BsaHI	GRCGYC	2 cut(s)	93, 345
BsaI	GGTCTC	1 cut(s)	1795
BsaJI	CCNNGG	5 cut(s)	198, 340, 1239, 1344, 1989
BsaWI	WCCGGW	1 cut(s)	354
Bse118I	RCCGGY	2 cut(s)	49, 366
Bse1I	ACTGG	4 cut(s)	768, 1570, 1587, 1809
Bse3DI	GCAATG	1 cut(s)	749
Bse8I	GATNNNNATC	1 cut(s)	290
BseBI	CCWGG	3 cut(s)	26, 422, 1345
BseCI	ATCGAT	2 cut(s)	528, 636
BseDI	CCNNGG	5 cut(s)	198, 340, 1239, 1344, 1989
BseGI	GGATG	8 cut(s)	336, 517, 967, 1195, 1249, 1828, 1869, 2023
BseJI	GATNNNNATC	1 cut(s)	290
BseMI	GCAATG	1 cut(s)	749
BseMII	CTCAG	7 cut(s)	776, 959, 1106, 1389, 1455, 1514, 2009
BseNI	ACTGG	4 cut(s)	768, 1570, 1587, 1809
BseRI	GAGGAG	3 cut(s)	215, 218, 1991
BseSI	GKGCMC	1 cut(s)	47
BseXI	GCAGC	5 cut(s)	673, 823, 851, 1564, 2049
BseYI	CCCAGC	1 cut(s)	159
BsgI	GTGCAG	4 cut(s)	1179, 1563, 1584, 2048
Bsh1236I	CGCG	2 cut(s)	342, 575
Bsh1285I	CGRYCG	1 cut(s)	532
BshFI	GGCC	3 cut(s)	53, 416, 1820
BshVI	ATCGAT	2 cut(s)	528, 636
BsiEI	CGRYCG	1 cut(s)	532
BsiHKAI	GWGCWC	4 cut(s)	429, 903, 1187, 1446
BsiHKCI	CYCGRG	2 cut(s)	236, 1679
BsiSI	CCGG	7 cut(s)	50, 278, 355, 367, 518, 1966, 2015
BslFI	GGGAC	1 cut(s)	1570
BsmAI	GTCTC	5 cut(s)	1528, 1795, 1973, 2084, 2168
BsmFI	GGGAC	1 cut(s)	1570
BsnI	GGCC	3 cut(s)	53, 416, 1820
Bso31I	GGTCTC	1 cut(s)	1795
BsoBI	CYCGRG	2 cut(s)	236, 1679
Bsp1286I	GDGCHC	7 cut(s)	47, 326, 429, 903, 986, 1187, 1446
Bsp19I	CCATGG	1 cut(s)	1989
BspACI	CCGC	7 cut(s)	181, 307, 340, 342, 430, 488, 1458
BspANI	GGCC	3 cut(s)	53, 416, 1820
BspCNI	CTCAG	7 cut(s)	775, 960, 1105, 1390, 1456, 1513, 2008
BspDI	ATCGAT	2 cut(s)	528, 636
BspFNI	CGCG	2 cut(s)	342, 575
BspHI	TCATGA	1 cut(s)	1849
BspLI	GGNNCC	2 cut(s)	359, 1558
BspMAI	CTGCAG	1 cut(s)	841
BspPI	GGATC	4 cut(s)	280, 394, 548, 1627
BspQI	GCTCTTC	1 cut(s)	170
BspTI	CTTAAG	1 cut(s)	920
BspTNI	GGTCTC	1 cut(s)	1795
BsrDI	GCAATG	1 cut(s)	749
BsrFI	RCCGGY	2 cut(s)	49, 366
BsrI	ACTGG	4 cut(s)	768, 1570, 1587, 1809
BssAI	RCCGGY	2 cut(s)	49, 366
BssECI	CCNNGG	5 cut(s)	198, 340, 1239, 1344, 1989
BssNI	GRCGYC	2 cut(s)	93, 345
BssT1I	CCWWGG	2 cut(s)	1239, 1989
Bst2UI	CCWGG	3 cut(s)	26, 422, 1345
Bst4CI	ACNGT	6 cut(s)	211, 494, 1189, 1522, 2069, 2116
Bst6I	CTCTTC	4 cut(s)	170, 1531, 1722, 2087
BstACI	GRCGYC	2 cut(s)	93, 345
BstAFI	CTTAAG	1 cut(s)	920
BstBAI	YACGTR	1 cut(s)	849
BstC8I	GCNNGC	8 cut(s)	20, 47, 51, 123, 659, 1143, 1183, 1696
BstDEI	CTNAG	8 cut(s)	762, 968, 1092, 1398, 1464, 1500, 1995, 2108
BstDSI	CCRYGG	2 cut(s)	340, 1989
BstF5I	GGATG	8 cut(s)	336, 517, 967, 1195, 1249, 1828, 1869, 2023
BstFNI	CGCG	2 cut(s)	342, 575
BstHHI	GCGC	4 cut(s)	464, 517, 601, 1480
BstMAI	GTCTC	5 cut(s)	1528, 1795, 1973, 2084, 2168
BstMCI	CGRYCG	1 cut(s)	532
BstMWI	GCNNNNNNNGC	5 cut(s)	461, 496, 824, 833, 1598
BstNI	CCWGG	3 cut(s)	26, 422, 1345
BstNSI	RCATGY	2 cut(s)	1698, 2105
BstSCI	CCNGG	4 cut(s)	24, 420, 1343, 1965
BstSFI	CTRYAG	2 cut(s)	837, 1635
BstSLI	GKGCMC	1 cut(s)	47
BstSNI	TACGTA	1 cut(s)	849
BstUI	CGCG	2 cut(s)	342, 575
BstV1I	GCAGC	5 cut(s)	673, 823, 851, 1564, 2049
BstV2I	GAAGAC	2 cut(s)	918, 1540
Bsu15I	ATCGAT	2 cut(s)	528, 636
BsuRI	GGCC	3 cut(s)	53, 416, 1820
BsuTUI	ATCGAT	2 cut(s)	528, 636
BtgI	CCRYGG	2 cut(s)	340, 1989
BtsCI	GGATG	8 cut(s)	336, 517, 967, 1195, 1249, 1828, 1869, 2023
BtsI	GCAGTG	1 cut(s)	1436
BtsIMutI	CAGTG	6 cut(s)	775, 1194, 1436, 1580, 1700, 2065
Cac8I	GCNNGC	8 cut(s)	20, 47, 51, 123, 659, 1143, 1183, 1696
CaiI	CAGNNNCTG	1 cut(s)	1135
CciI	TCATGA	1 cut(s)	1849
CfoI	GCGC	4 cut(s)	464, 517, 601, 1480
Cfr10I	RCCGGY	2 cut(s)	49, 366
Cfr13I	GGNCC	6 cut(s)	28, 52, 202, 271, 1557, 1819
Cfr42I	CCGCGG	1 cut(s)	343
ClaI	ATCGAT	2 cut(s)	528, 636
CseI	GACGC	1 cut(s)	334
Csp6I	GTAC	4 cut(s)	334, 730, 974, 1353
CviQI	GTAC	4 cut(s)	334, 730, 974, 1353
DdeI	CTNAG	8 cut(s)	762, 968, 1092, 1398, 1464, 1500, 1995, 2108
DrdI	GACNNNNNNGTC	2 cut(s)	10, 209
DseDI	GACNNNNNNGTC	2 cut(s)	10, 209
EaeI	YGGCCR	1 cut(s)	414
Eam1104I	CTCTTC	4 cut(s)	170, 1531, 1722, 2087
EarI	CTCTTC	4 cut(s)	170, 1531, 1722, 2087
Ecl136II	GAGCTC	1 cut(s)	1444
Eco105I	TACGTA	1 cut(s)	849
Eco130I	CCWWGG	2 cut(s)	1239, 1989
Eco24I	GRGCYC	3 cut(s)	326, 986, 1446
Eco31I	GGTCTC	1 cut(s)	1795
Eco32I	GATATC	1 cut(s)	2001
Eco47I	GGWCC	4 cut(s)	28, 202, 271, 1557
Eco53kI	GAGCTC	1 cut(s)	1444
Eco57I	CTGAAG	1 cut(s)	1218
Eco88I	CYCGRG	2 cut(s)	236, 1679
EcoICRI	GAGCTC	1 cut(s)	1444
EcoO109I	RGGNCCY	2 cut(s)	271, 1557
EcoRI	GAATTC	1 cut(s)	1495
EcoRII	CCWGG	3 cut(s)	24, 420, 1343
EcoRV	GATATC	1 cut(s)	2001
EcoT14I	CCWWGG	2 cut(s)	1239, 1989
EcoT38I	GRGCYC	3 cut(s)	326, 986, 1446
ErhI	CCWWGG	2 cut(s)	1239, 1989
FaqI	GGGAC	1 cut(s)	1570
FblI	GTMKAC	1 cut(s)	1517
Fnu4HI	GCNGC	6 cut(s)	343, 662, 837, 840, 1578, 2063
FokI	GGATG	8 cut(s)	323, 524, 974, 1182, 1256, 1815, 1856, 2030
FriOI	GRGCYC	3 cut(s)	326, 986, 1446
Fsp4HI	GCNGC	6 cut(s)	343, 662, 837, 840, 1578, 2063
FspBI	CTAG	2 cut(s)	561, 1983
FspI	TGCGCA	1 cut(s)	600
GlaI	GCGC	4 cut(s)	463, 516, 600, 1479
GluI	GCNGC	6 cut(s)	343, 662, 837, 840, 1578, 2063
GsaI	CCCAGC	1 cut(s)	163
GsuI	CTGGAG	4 cut(s)	244, 302, 443, 650
HaeIII	GGCC	3 cut(s)	53, 416, 1820
HapII	CCGG	7 cut(s)	50, 278, 355, 367, 518, 1966, 2015
HgaI	GACGC	1 cut(s)	334
HhaI	GCGC	4 cut(s)	464, 517, 601, 1480
Hin1I	GRCGYC	2 cut(s)	93, 345
Hin6I	GCGC	4 cut(s)	462, 515, 599, 1478
HinP1I	GCGC	4 cut(s)	462, 515, 599, 1478
HincII	GTYRAC	1 cut(s)	1518
HindII	GTYRAC	1 cut(s)	1518
HindIII	AAGCTT	3 cut(s)	218, 1709, 1773
HpaII	CCGG	7 cut(s)	50, 278, 355, 367, 518, 1966, 2015
HphI	GGTGA	6 cut(s)	163, 506, 728, 1112, 1679, 1904
Hpy166II	GTNNAC	6 cut(s)	31, 781, 1353, 1518, 1756, 1877
Hpy8I	GTNNAC	6 cut(s)	31, 781, 1353, 1518, 1756, 1877
Hpy99I	CGWCG	4 cut(s)	95, 98, 450, 1519
HpyAV	CCTTC	9 cut(s)	77, 200, 414, 567, 688, 715, 1069, 1749, 1832
HpyCH4III	ACNGT	6 cut(s)	211, 494, 1189, 1522, 2069, 2116
HpyCH4IV	ACGT	3 cut(s)	93, 186, 848
HpyF10VI	GCNNNNNNNGC	5 cut(s)	461, 496, 824, 833, 1598
HpyF3I	CTNAG	8 cut(s)	762, 968, 1092, 1398, 1464, 1500, 1995, 2108
HpySE526I	ACGT	3 cut(s)	93, 186, 848
Hsp92I	GRCGYC	2 cut(s)	93, 345
HspAI	GCGC	4 cut(s)	462, 515, 599, 1478
KroI	GCCGGC	1 cut(s)	49
KroNI	GCCGGC	1 cut(s)	51
KspI	CCGCGG	1 cut(s)	343
LguI	GCTCTTC	1 cut(s)	170
LmnI	GCTCC	6 cut(s)	27, 357, 424, 669, 1441, 1449
Lsp1109I	GCAGC	5 cut(s)	673, 823, 851, 1564, 2049
LweI	GCATC	4 cut(s)	502, 1122, 1204, 1878
MaeI	CTAG	2 cut(s)	561, 1983
MaeII	ACGT	3 cut(s)	93, 186, 848
MaeIII	GTNAC	3 cut(s)	346, 1389, 1667
MfeI	CAATTG	1 cut(s)	1833
MhlI	GDGCHC	7 cut(s)	47, 326, 429, 903, 986, 1187, 1446
MlsI	TGGCCA	1 cut(s)	416
MluCI	AATT	7 cut(s)	592, 683, 1269, 1495, 1833, 1857, 2025
MluI	ACGCGT	1 cut(s)	573
MluNI	TGGCCA	1 cut(s)	416
MlyI	GAGTC	5 cut(s)	251, 386, 714, 1084, 1691
MmeI	TCCRAC	2 cut(s)	660, 1296
Mox20I	TGGCCA	1 cut(s)	416
MroNI	GCCGGC	1 cut(s)	49
MroXI	GAANNNNTTC	1 cut(s)	1731
MscI	TGGCCA	1 cut(s)	416
MseI	TTAA	9 cut(s)	591, 735, 756, 912, 921, 1164, 1425, 1781, 1941
MslI	CAYNNNNRTG	2 cut(s)	473, 1190
Msp20I	TGGCCA	1 cut(s)	416
MspA1I	CMGCKG	1 cut(s)	342
MspCI	CTTAAG	1 cut(s)	920
MspI	CCGG	7 cut(s)	50, 278, 355, 367, 518, 1966, 2015
MspR9I	CCNGG	4 cut(s)	26, 422, 1345, 1967
MunI	CAATTG	1 cut(s)	1833
MvaI	CCWGG	3 cut(s)	26, 422, 1345
MvnI	CGCG	2 cut(s)	342, 575
MwoI	GCNNNNNNNGC	5 cut(s)	461, 496, 824, 833, 1598
NaeI	GCCGGC	1 cut(s)	51
NciI	CCSGG	1 cut(s)	1967
NcoI	CCATGG	1 cut(s)	1989
NgoMIV	GCCGGC	1 cut(s)	49
NlaIV	GGNNCC	2 cut(s)	359, 1558
NmuCI	GTSAC	3 cut(s)	346, 1389, 1667
NsbI	TGCGCA	1 cut(s)	600
NspI	RCATGY	2 cut(s)	1698, 2105
OliI	CACNNNNGTG	1 cut(s)	1190
PaeI	GCATGC	1 cut(s)	1698
PaeR7I	CTCGAG	2 cut(s)	236, 1679
PagI	TCATGA	1 cut(s)	1849
PciI	ACATGT	1 cut(s)	2101
PciSI	GCTCTTC	1 cut(s)	170
PcsI	WCGNNNNNNNCGW	2 cut(s)	87, 818
PdiI	GCCGGC	1 cut(s)	51
PdmI	GAANNNNTTC	1 cut(s)	1731
PfeI	GAWTC	7 cut(s)	98, 409, 829, 940, 1333, 1657, 1844
PkrI	GCNGC	6 cut(s)	344, 663, 838, 841, 1579, 2064
Ple19I	CGATCG	1 cut(s)	532
PleI	GAGTC	5 cut(s)	251, 385, 713, 1084, 1690
PpsI	GAGTC	5 cut(s)	251, 385, 713, 1084, 1690
Ppu21I	YACGTR	1 cut(s)	849
PpuMI	RGGWCCY	2 cut(s)	271, 1557
PscI	ACATGT	1 cut(s)	2101
PshBI	ATTAAT	1 cut(s)	912
Psp124BI	GAGCTC	1 cut(s)	1446
Psp5II	RGGWCCY	2 cut(s)	271, 1557
Psp6I	CCWGG	3 cut(s)	24, 420, 1343
PspFI	CCCAGC	1 cut(s)	159
PspGI	CCWGG	3 cut(s)	24, 420, 1343
PspN4I	GGNNCC	2 cut(s)	359, 1558
PspPI	GGNCC	6 cut(s)	28, 52, 202, 271, 1557, 1819
PspPPI	RGGWCCY	2 cut(s)	271, 1557
PspXI	VCTCGAGB	1 cut(s)	1679
PstI	CTGCAG	1 cut(s)	841
PstNI	CAGNNNCTG	1 cut(s)	1135
PvuI	CGATCG	1 cut(s)	532
RsaI	GTAC	4 cut(s)	335, 731, 975, 1354
RsaNI	GTAC	4 cut(s)	334, 730, 974, 1353
RseI	CAYNNNNRTG	2 cut(s)	473, 1190
SacI	GAGCTC	1 cut(s)	1446
SacII	CCGCGG	1 cut(s)	343
SalI	GTCGAC	1 cut(s)	1516
SapI	GCTCTTC	1 cut(s)	170
SaqAI	TTAA	9 cut(s)	591, 735, 756, 912, 921, 1164, 1425, 1781, 1941
SatI	GCNGC	6 cut(s)	343, 662, 837, 840, 1578, 2063
Sau96I	GGNCC	6 cut(s)	28, 52, 202, 271, 1557, 1819
SchI	GAGTC	5 cut(s)	251, 386, 714, 1084, 1691
ScrFI	CCNGG	4 cut(s)	26, 422, 1345, 1967
SduI	GDGCHC	7 cut(s)	47, 326, 429, 903, 986, 1187, 1446
SfaNI	GCATC	4 cut(s)	502, 1122, 1204, 1878
SfcI	CTRYAG	2 cut(s)	837, 1635
Sfr274I	CTCGAG	2 cut(s)	236, 1679
Sfr303I	CCGCGG	1 cut(s)	343
SgrBI	CCGCGG	1 cut(s)	343
SinI	GGWCC	4 cut(s)	28, 202, 271, 1557
SlaI	CTCGAG	2 cut(s)	236, 1679
SmiMI	CAYNNNNRTG	2 cut(s)	473, 1190
SmlI	CTYRAG	7 cut(s)	116, 236, 920, 1025, 1106, 1645, 1679
SmoI	CTYRAG	7 cut(s)	116, 236, 920, 1025, 1106, 1645, 1679
SnaBI	TACGTA	1 cut(s)	849
SphI	GCATGC	1 cut(s)	1698
Sse9I	AATT	7 cut(s)	592, 683, 1269, 1495, 1833, 1857, 2025
SsiI	CCGC	7 cut(s)	181, 307, 340, 342, 430, 488, 1458
SspI	AATATT	1 cut(s)	1048
SspMI	CTAG	2 cut(s)	561, 1983
SstI	GAGCTC	1 cut(s)	1446
StyD4I	CCNGG	4 cut(s)	24, 420, 1343, 1965
StyI	CCWWGG	2 cut(s)	1239, 1989
TaaI	ACNGT	6 cut(s)	211, 494, 1189, 1522, 2069, 2116
TaiI	ACGT	3 cut(s)	96, 189, 851
TasI	AATT	7 cut(s)	592, 683, 1269, 1495, 1833, 1857, 2025
TatI	WGTACW	3 cut(s)	333, 729, 1352
TauI	GCSGC	1 cut(s)	345
TfiI	GAWTC	7 cut(s)	98, 409, 829, 940, 1333, 1657, 1844
Tru1I	TTAA	9 cut(s)	591, 735, 756, 912, 921, 1164, 1425, 1781, 1941
Tru9I	TTAA	9 cut(s)	591, 735, 756, 912, 921, 1164, 1425, 1781, 1941
TscAI	CASTG	6 cut(s)	775, 1194, 1436, 1587, 1707, 2072
TseFI	GTSAC	3 cut(s)	346, 1389, 1667
TseI	GCWGC	5 cut(s)	661, 836, 839, 1577, 2062
Tsp45I	GTSAC	3 cut(s)	346, 1389, 1667
TspDTI	ATGAA	2 cut(s)	157, 1143
TspGWI	ACGGA	2 cut(s)	20, 1862
TspRI	CASTG	6 cut(s)	775, 1194, 1436, 1587, 1707, 2072
Vha464I	CTTAAG	1 cut(s)	920
VpaK11BI	GGWCC	4 cut(s)	28, 202, 271, 1557
VspI	ATTAAT	1 cut(s)	912
XapI	RAATTY	1 cut(s)	1495
XceI	RCATGY	2 cut(s)	1698, 2105
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1537
XhoI	CTCGAG	2 cut(s)	236, 1679
XmiI	GTMKAC	1 cut(s)	1517
XmnI	GAANNNNTTC	1 cut(s)	1731
XspI	CTAG	2 cut(s)	561, 1983
ZraI	GACGTC	1 cut(s)	94

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.