Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4B

Orthogroup ID

OG0000969

Physical Location & Seq

Genomic Coordinates Forward (+)

29932909 .. 29940001

Gene Structure 7093 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4BG166100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2133 bp

ATGGAGAAATCTTGTAGTCTGCTAGTTCATTTTGATAAAGGAACACCCGCAATTGCAAATGAGATCAGGGAAGCTCTTGAAGGCAATGATGTAGAGGCAAAGATAGATGCAATGAAGAAGGCAATCATGCTTTTGTTGAATGGTGAAACATTGCCTCAGCTTTTTATCACCATTGTTCGATACGTTTTGCCTTCTGAGGACCACACTGTCCAGAAACTACTGCTGTTATATTTGGAGATAATTGAGAAAACTGATGCAAAGGGTAGAGTCTTACCTGAAATGATTTTAATTTGCCAAAATTTGAGGAACAACCTACAGCACCCCAATGAGTATATCCGTGGTGTAACTCTAAGGTTTCTTTGCCGGTTGAACGAGACCGAGATAATTGAGCCGTTAATCCCTTCTGTATTGCAAAATTTGGAGCATAGGCACCCTTATATTAGGAGAAATGCTATATTAGCTATGATGTCCATATACAAGTTACCACAGGGTGAGCAAATTTTGGTTGACGCGCCTGAAATGATTGAGAAGCTTCTTTCGACGGAGCAGGATCCATCTGCTAAGCGGAATGCGTTTCTCATGCTCTTCACTTGTGCCCAGGACCGTGCGGTTAATTATCTTTTGACCAATGTTGATAAGGTTTCTGAATGGGGTGAATTGCTGCAGATGATTGTGTTAGACCTGATACGGAAAGTGTGCAGGACAAATCGTGGAGAGAAGGGGAGGTACATTAAGATCATTATATCCTTATTGAATGTGCCTTCAACTGCAGTTGTTTATGAATGTGCTGGGACACTCGTTTCCTTGTCATATGCCCCTACTGCTATTAGAGCTGCTGCCAACACCTACTGTCAGCTTCTTCTTTCTCAGAGTGACAACAATGTGAAGCTTATTGTTCTTGATCGGCTGAATGAGCTAAAGTCTTCTCATAGAGAAGTTATGGCTGATATGTTCATGGACATTCTTAGGGCACTTTCTAGTCCAAATCTTGACGTCCGTAGGAAGACCCTAGATATTGTTCTTGAGCTGGTTACTAACCGGAACATAAATGAGGTTGTTCTTACATTGAAAAAGGAAGTTGTTAAGACTCAAAATGGAGAGCTAGAGAAGAATGGTGAATACAGGCAGATGCTTATTCAGGCCATTCATTCTTGTGCAGTAAAGTTCCCGGAAGTTGCAAGCACAGTGGTCCATTTGTTGATGGATTTCTTGGGAGACAGCAATGTTGCTTCAGCTACTGATGTGATTGTGTTTGTTCGGGAGATAATTGAAACAAATCCTAAACTAAGGGTATCTATAATAACAAGGCTATTGGACACGTTTTACCAAATCCGAGCATCACGTGTTTGTGCTTGTGCTCTTTGGATTATTGGAGAGTACTGCCTATCACTTTCTGAAGTTGAAAGTGGACTTGCAACAATTAAACAGTGTCTTGGAGAATTGCCTTTTTACTCGCTCTCAGAAGAAGAAGAAGGTAATGATTCTTCAAAGAAGGTTCAGCAAGTAAACTCCATGACCGTGTCTTCTAAAAGACCAGCTATTCTTTCTGATGGGACTTATGCCACACAGAGTGCTGCATCTGAAACTGCTTTCTCCCCACCTACCCTTGTTCATGGATCCTTGGCATCTGGGAACTTGAGATCCCTGCTTCTCACTGGTGACTATTTTCTTGGGGCAGTTGTTGCTTGCACACTGACCAAGCTTGTTCTGAGACTGGAAGAGGTTCAGCCATCTAGGGTGGAAGTGCATAAAGCATCTGCACAAGCACTGTTGATAATTGTCTCTATGCTGCAATTAGGCCAATCTCCAGTCCTTCCACATCCAATTGACAACGATTCATATGATAGGATGGTCCTCTGCATAAGATTGTTATGCAATACTGGTGATGAGATAAAGAAAATATGGCTGCAATCTTGCCGTCAAAGTTTTGTTAGTATGCTTACAGAAAAACAATTAAGGGAAACAGCGGAAATCAAAGCAAAGGCTCAGATTTCTCATGCACAGCCGGATGACCTTATTGACTTCTACCATTTAAAAAGCAGGAAGGTACAACTTCTGCATTCATTTAACCACTGTATTGTTTCATTTATCAATTTCTATGCTGATGACATCGGACAAGCTCTGGTCTACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005798 GO:0005829 GO:0005911 GO:0006810 GO:0006888 GO:0006890 GO:0006891 GO:0008150 GO:0009506 GO:0012505 GO:0012506 GO:0016020 GO:0016192 GO:0030054 GO:0030117 GO:0030120 GO:0030126 GO:0030135 GO:0030137 GO:0030659 GO:0030660 GO:0030662 GO:0030663 GO:0031090 GO:0031410 GO:0031982 GO:0032991 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044431 GO:0044433 GO:0044444 GO:0044446 GO:0044464 GO:0046907 GO:0048193 GO:0048475 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0055044 GO:0097708 GO:0098588 GO:0098796 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Adaptin_N Coatamer_beta_C Coatomer_b_Cpla

Protein Analysis

710

Amino Acids

79.78

Weight (kDa)

6.16

Isoelectric Point (pI)

44.6

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Adaptin_N	PF01602	18 - 467	7.2e-96	Adaptin N terminal region
Cnd1	PF12717	112 - 260	4.5e-06	non-SMC mitotic condensation complex subunit 1

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000969)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G31480 AT4G31480 AT4G31480 AT4G31480 AT4G31480 AT4G31480 AT4G31480 AT4G31480 AT4G31480 AT4G31490 AT4G31490 AT4G31490
fragaria_vesca	FvH4_4g12700 FvH4_4g12700 FvH4_4g12700 FvH4_6g37230 FvH4_6g37230 FvH4_6g37230
malus_domestica	MD04G1023700.v1.1 MD09G1159400.v1.1 MD13G1280100.v1.1 MD17G1145600.v1.1
prunus_persica	Prupe.3G018300_v2.0.a1 Prupe.3G018400_v2.0.a1
pyrus_communis	pycom04g02030 pycom09g07780 pycom09g18330 pycom13g29300 pycom15g32330 pycom15g32340 pycom17g13850
rosa_chinensis	RchiOBHm_Chr2g0149941 RchiOBHm_Chr2g0149961 RchiOBHm_Chr2g0149991 RchiOBHm_Chr4g0411591
rosa_laevigata	RLG00000008343 RLG00000020457 RLG00000020458
rosa_multiflora	Rmu_sc0001899.1_g000002 Rmu_sc0006550.1_g000008
rosa_roxburghii	Rroxscaffold_2G00097530 Rroxscaffold_2G00097540 Rroxscaffold_5G00356170
rosa_rugosa	Rorug02G0417300 Rorug04G0107800
rosa_samantha	Rh2AG476800 Rh2AG476900 Rh2AG477100 Rh2BG488500 Rh2BG488600 Rh2CG462500 Rh2CG462600 Rh2CG462800 Rh2DG497600 Rh2DG497700 Rh4AG169200 Rh4BG166100 Rh4CG180900 Rh4DG163500
rosa_wichuraiana	Rw2G038870 Rw2G038880 Rw2G038900 Rw4G014060

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	206
AatII	GACGTC	1 cut(s)	996
AccB1I	GGYRCC	1 cut(s)	429
AccI	GTMKAC	1 cut(s)	2127
AccII	CGCG	1 cut(s)	512
AciI	CCGC	4 cut(s)	48, 565, 608, 1967
AclWI	GGATC	5 cut(s)	545, 558, 1611, 1624, 1635
AcsI	RAATTY	3 cut(s)	298, 415, 498
AcuI	CTGAAG	2 cut(s)	1215, 1416
AcvI	CACGTG	1 cut(s)	1343
AcyI	GRCGYC	1 cut(s)	993
AdeI	CACNNNGTG	2 cut(s)	491, 1571
AfaI	GTAC	3 cut(s)	728, 1379, 2049
AflIII	ACRYGT	2 cut(s)	1317, 1342
AgsI	TTSAA	9 cut(s)	80, 139, 370, 754, 765, 1069, 1271, 1403, 1488
AjnI	CCWGG	1 cut(s)	597
AloI	GAACNNNNNNTCC	2 cut(s)	1625, 1657
Alw21I	GWGCWC	1 cut(s)	1360
Alw26I	GTCTC	4 cut(s)	368, 1209, 1705, 1786
AlwI	GGATC	5 cut(s)	545, 558, 1611, 1624, 1635
AlwNI	CAGNNNCTG	1 cut(s)	1238
AoxI	GGCC	2 cut(s)	1140, 1798
ApeKI	GCWGC	6 cut(s)	661, 833, 836, 1574, 1789, 1906
ApoI	RAATTY	3 cut(s)	298, 415, 498
Asp700I	GAANNNNTTC	1 cut(s)	1722
AspLEI	GCGC	1 cut(s)	514
AspS9I	GGNCC	4 cut(s)	199, 601, 1189, 1852
AsuC2I	CCSGG	1 cut(s)	1169
AsuHPI	GGTGA	7 cut(s)	155, 160, 503, 665, 1127, 1670, 1895
AvaII	GGWCC	4 cut(s)	199, 601, 1189, 1852
BaeGI	GKGCMC	2 cut(s)	598, 973
BamHI	GGATCC	2 cut(s)	550, 1616
BanI	GGYRCC	1 cut(s)	429
BarI	GAAGNNNNNNTAC	4 cut(s)	710, 742, 1468, 1500
BbrPI	CACGTG	1 cut(s)	1343
BbsI	GAAGAC	3 cut(s)	915, 1010, 1515
Bbv12I	GWGCWC	1 cut(s)	1360
BbvCI	CCTCAGC	1 cut(s)	156
BbvI	GCAGC	6 cut(s)	648, 820, 823, 1561, 1776, 1893
BccI	CCATC	5 cut(s)	562, 1195, 1544, 1738, 1843
BceAI	ACGGC	2 cut(s)	376, 1902
BciT130I	CCWGG	1 cut(s)	599
BcnI	CCSGG	1 cut(s)	1169
BcoDI	GTCTC	4 cut(s)	368, 1209, 1705, 1786
BfaI	CTAG	6 cut(s)	23, 978, 1010, 1103, 1734, 2131
BfmI	CTRYAG	3 cut(s)	314, 662, 768
BisI	GCNGC	6 cut(s)	662, 834, 837, 1575, 1790, 1907
BlpI	GCTNAGC	1 cut(s)	561
BlsI	GCNGC	6 cut(s)	663, 835, 838, 1576, 1791, 1908
BmcAI	AGTACT	1 cut(s)	1379
Bme1390I	CCNGG	2 cut(s)	599, 1169
Bme18I	GGWCC	4 cut(s)	199, 601, 1189, 1852
BmgT120I	GGNCC	4 cut(s)	199, 601, 1189, 1852
BmiI	GGNNCC	3 cut(s)	431, 552, 1618
BmrFI	CCNGG	2 cut(s)	599, 1169
BmsI	GCATC	7 cut(s)	97, 244, 1119, 1346, 1586, 1634, 1763
BpiI	GAAGAC	3 cut(s)	915, 1010, 1515
BpmI	CTGGAG	1 cut(s)	1791
Bpu10I	CCTNAGC	1 cut(s)	156
Bpu1102I	GCTNAGC	1 cut(s)	561
BpuEI	CTTGAG	2 cut(s)	1043, 1657
BpuMI	CCSGG	1 cut(s)	1169
BsaAI	YACGTR	1 cut(s)	1343
BsaHI	GRCGYC	1 cut(s)	993
BsaI	GGTCTC	1 cut(s)	368
BsaJI	CCNNGG	3 cut(s)	337, 597, 1620
BsaWI	WCCGGW	1 cut(s)	1038
Bse118I	RCCGGY	1 cut(s)	363
Bse1I	ACTGG	4 cut(s)	1660, 1719, 1808, 1885
Bse3DI	GCAATG	4 cut(s)	91, 117, 149, 1228
BseBI	CCWGG	1 cut(s)	599
BseDI	CCNNGG	3 cut(s)	337, 597, 1620
BseGI	GGATG	3 cut(s)	1819, 1854, 2014
BseMI	GCAATG	4 cut(s)	91, 117, 149, 1228
BseMII	CTCAG	6 cut(s)	170, 186, 881, 1473, 1700, 2000
BseNI	ACTGG	4 cut(s)	1660, 1719, 1808, 1885
BseSI	GKGCMC	2 cut(s)	598, 973
BseXI	GCAGC	6 cut(s)	648, 820, 823, 1561, 1776, 1893
BseYI	CCCAGC	1 cut(s)	788
BsgI	GTGCAG	3 cut(s)	718, 1176, 1743
Bsh1236I	CGCG	1 cut(s)	512
BshFI	GGCC	2 cut(s)	1142, 1800
BshNI	GGYRCC	1 cut(s)	429
BsiHKAI	GWGCWC	1 cut(s)	1360
BsiSI	CCGG	4 cut(s)	364, 1039, 1169, 2006
BslFI	GGGAC	2 cut(s)	805, 1567
BsmAI	GTCTC	4 cut(s)	368, 1209, 1705, 1786
BsmFI	GGGAC	2 cut(s)	805, 1567
BsmI	GAATGC	2 cut(s)	574, 2059
BsnI	GGCC	2 cut(s)	1142, 1800
Bso31I	GGTCTC	1 cut(s)	368
Bsp1286I	GDGCHC	3 cut(s)	598, 973, 1360
Bsp143I	GATC	6 cut(s)	63, 550, 735, 901, 1616, 1640
Bsp1720I	GCTNAGC	1 cut(s)	561
BspACI	CCGC	4 cut(s)	48, 565, 608, 1967
BspANI	GGCC	2 cut(s)	1142, 1800
BspCNI	CTCAG	6 cut(s)	169, 187, 880, 1472, 1701, 1999
BspFNI	CGCG	1 cut(s)	512
BspLI	GGNNCC	3 cut(s)	431, 552, 1618
BspMAI	CTGCAG	2 cut(s)	666, 772
BspPI	GGATC	5 cut(s)	545, 558, 1611, 1624, 1635
BspQI	GCTCTTC	1 cut(s)	590
BspT107I	GGYRCC	1 cut(s)	429
BspTNI	GGTCTC	1 cut(s)	368
BsrDI	GCAATG	4 cut(s)	91, 117, 149, 1228
BsrFI	RCCGGY	1 cut(s)	363
BsrI	ACTGG	4 cut(s)	1660, 1719, 1808, 1885
BssAI	RCCGGY	1 cut(s)	363
BssECI	CCNNGG	3 cut(s)	337, 597, 1620
BssMI	GATC	6 cut(s)	63, 550, 735, 901, 1616, 1640
BssNI	GRCGYC	1 cut(s)	993
BssT1I	CCWWGG	1 cut(s)	1620
Bst2UI	CCWGG	1 cut(s)	599
Bst4CI	ACNGT	8 cut(s)	208, 605, 851, 1186, 1428, 1519, 1770, 2075
Bst6I	CTCTTC	2 cut(s)	590, 1713
BstACI	GRCGYC	1 cut(s)	993
BstAPI	GCANNNNNTGC	1 cut(s)	1682
BstBAI	YACGTR	1 cut(s)	1343
BstC8I	GCNNGC	2 cut(s)	1180, 1687
BstDSI	CCRYGG	1 cut(s)	337
BstF5I	GGATG	3 cut(s)	1819, 1854, 2014
BstFNI	CGCG	1 cut(s)	512
BstHHI	GCGC	1 cut(s)	514
BstKTI	GATC	6 cut(s)	66, 553, 738, 904, 1619, 1643
BstMAI	GTCTC	4 cut(s)	368, 1209, 1705, 1786
BstMBI	GATC	6 cut(s)	63, 550, 735, 901, 1616, 1640
BstMWI	GCNNNNNNNGC	5 cut(s)	458, 821, 830, 913, 1682
BstNI	CCWGG	1 cut(s)	599
BstSCI	CCNGG	2 cut(s)	597, 1167
BstSFI	CTRYAG	3 cut(s)	314, 662, 768
BstSLI	GKGCMC	2 cut(s)	598, 973
BstUI	CGCG	1 cut(s)	512
BstV1I	GCAGC	6 cut(s)	648, 820, 823, 1561, 1776, 1893
BstV2I	GAAGAC	3 cut(s)	915, 1010, 1515
BstX2I	RGATCY	3 cut(s)	550, 1616, 1640
BstYI	RGATCY	3 cut(s)	550, 1616, 1640
BsuRI	GGCC	2 cut(s)	1142, 1800
BtgI	CCRYGG	1 cut(s)	337
BtsCI	GGATG	3 cut(s)	1819, 1854, 2014
BtsIMutI	CAGTG	7 cut(s)	204, 1191, 1433, 1653, 1691, 1766, 2071
Cac8I	GCNNGC	2 cut(s)	1180, 1687
CaiI	CAGNNNCTG	1 cut(s)	1238
CfoI	GCGC	1 cut(s)	514
Cfr10I	RCCGGY	1 cut(s)	363
Cfr13I	GGNCC	4 cut(s)	199, 601, 1189, 1852
CseI	GACGC	1 cut(s)	518
Csp6I	GTAC	3 cut(s)	727, 1378, 2048
CspCI	CAANNNNNGTGG	2 cut(s)	1167, 1202
CviAII	CATG	6 cut(s)	127, 580, 955, 1513, 1613, 1997
CviQI	GTAC	3 cut(s)	727, 1378, 2048
DpnI	GATC	6 cut(s)	65, 552, 737, 903, 1618, 1642
DpnII	GATC	6 cut(s)	63, 550, 735, 901, 1616, 1640
DraI	TTTAAA	1 cut(s)	2034
DraIII	CACNNNGTG	2 cut(s)	491, 1571
DrdI	GACNNNNNNGTC	1 cut(s)	206
DseDI	GACNNNNNNGTC	1 cut(s)	206
Eam1104I	CTCTTC	2 cut(s)	590, 1713
EarI	CTCTTC	2 cut(s)	590, 1713
Eco130I	CCWWGG	1 cut(s)	1620
Eco31I	GGTCTC	1 cut(s)	368
Eco47I	GGWCC	4 cut(s)	199, 601, 1189, 1852
Eco57I	CTGAAG	2 cut(s)	1215, 1416
Eco72I	CACGTG	1 cut(s)	1343
EcoRII	CCWGG	1 cut(s)	597
EcoT14I	CCWWGG	1 cut(s)	1620
ErhI	CCWWGG	1 cut(s)	1620
FaeI	CATG	6 cut(s)	130, 583, 958, 1516, 1616, 2000
FaqI	GGGAC	2 cut(s)	805, 1567
FatI	CATG	6 cut(s)	126, 579, 954, 1512, 1612, 1996
FauI	CCCGC	1 cut(s)	55
FauNDI	CATATG	2 cut(s)	811, 1840
FblI	GTMKAC	1 cut(s)	2127
Fnu4HI	GCNGC	6 cut(s)	662, 834, 837, 1575, 1790, 1907
FokI	GGATG	3 cut(s)	1806, 1861, 2021
Fsp4HI	GCNGC	6 cut(s)	662, 834, 837, 1575, 1790, 1907
FspBI	CTAG	6 cut(s)	23, 978, 1010, 1103, 1734, 2131
GlaI	GCGC	1 cut(s)	513
GluI	GCNGC	6 cut(s)	662, 834, 837, 1575, 1790, 1907
GsaI	CCCAGC	1 cut(s)	792
GsuI	CTGGAG	1 cut(s)	1791
HaeIII	GGCC	2 cut(s)	1142, 1800
HapII	CCGG	4 cut(s)	364, 1039, 1169, 2006
HgaI	GACGC	1 cut(s)	518
HhaI	GCGC	1 cut(s)	514
Hin1I	GRCGYC	1 cut(s)	993
Hin1II	CATG	6 cut(s)	130, 583, 958, 1516, 1616, 2000
Hin6I	GCGC	1 cut(s)	512
HinP1I	GCGC	1 cut(s)	512
HincII	GTYRAC	1 cut(s)	508
HindII	GTYRAC	1 cut(s)	508
HindIII	AAGCTT	3 cut(s)	530, 887, 1700
HinfI	GANTC	4 cut(s)	267, 1087, 1481, 1835
HpaII	CCGG	4 cut(s)	364, 1039, 1169, 2006
HphI	GGTGA	7 cut(s)	155, 160, 503, 665, 1127, 1670, 1895
Hpy166II	GTNNAC	4 cut(s)	508, 1409, 1507, 2128
Hpy188III	TCNNGA	6 cut(s)	77, 211, 899, 989, 1022, 1259
Hpy8I	GTNNAC	4 cut(s)	508, 1409, 1507, 2128
Hpy99I	CGWCG	1 cut(s)	544
HpyCH4III	ACNGT	8 cut(s)	208, 605, 851, 1186, 1428, 1519, 1770, 2075
HpyCH4IV	ACGT	4 cut(s)	183, 993, 1319, 1342
HpyF10VI	GCNNNNNNNGC	5 cut(s)	458, 821, 830, 913, 1682
HpySE526I	ACGT	4 cut(s)	183, 993, 1319, 1342
Hsp92I	GRCGYC	1 cut(s)	993
Hsp92II	CATG	6 cut(s)	130, 583, 958, 1516, 1616, 2000
HspAI	GCGC	1 cut(s)	512
Kzo9I	GATC	6 cut(s)	63, 550, 735, 901, 1616, 1640
LguI	GCTCTTC	1 cut(s)	590
LmnI	GCTCC	2 cut(s)	421, 544
Lsp1109I	GCAGC	6 cut(s)	648, 820, 823, 1561, 1776, 1893
LweI	GCATC	7 cut(s)	97, 244, 1119, 1346, 1586, 1634, 1763
MaeI	CTAG	6 cut(s)	23, 978, 1010, 1103, 1734, 2131
MaeII	ACGT	4 cut(s)	183, 993, 1319, 1342
MaeIII	GTNAC	5 cut(s)	343, 480, 872, 1030, 1658
MalI	GATC	6 cut(s)	65, 552, 737, 903, 1618, 1642
MboI	GATC	6 cut(s)	63, 550, 735, 901, 1616, 1640
MfeI	CAATTG	2 cut(s)	51, 1824
MflI	RGATCY	3 cut(s)	550, 1616, 1640
MhlI	GDGCHC	3 cut(s)	598, 973, 1360
MlyI	GAGTC	2 cut(s)	276, 1081
MnlI	CCTC	8 cut(s)	88, 165, 190, 297, 717, 1045, 1714, 1865
MroXI	GAANNNNTTC	1 cut(s)	1722
MseI	TTAA	9 cut(s)	287, 395, 612, 732, 1083, 1422, 1955, 2033, 2067
MslI	CAYNNNNRTG	3 cut(s)	324, 1152, 1517
MspA1I	CMGCKG	1 cut(s)	1967
MspI	CCGG	4 cut(s)	364, 1039, 1169, 2006
MspR9I	CCNGG	2 cut(s)	599, 1169
MunI	CAATTG	2 cut(s)	51, 1824
Mva1269I	GAATGC	2 cut(s)	574, 2059
MvaI	CCWGG	1 cut(s)	599
MvnI	CGCG	1 cut(s)	512
MwoI	GCNNNNNNNGC	5 cut(s)	458, 821, 830, 913, 1682
NciI	CCSGG	1 cut(s)	1169
NdeI	CATATG	2 cut(s)	811, 1840
NdeII	GATC	6 cut(s)	63, 550, 735, 901, 1616, 1640
NlaIII	CATG	6 cut(s)	130, 583, 958, 1516, 1616, 2000
NlaIV	GGNNCC	3 cut(s)	431, 552, 1618
NmuCI	GTSAC	2 cut(s)	872, 1658
PciSI	GCTCTTC	1 cut(s)	590
PctI	GAATGC	2 cut(s)	574, 2059
PdmI	GAANNNNTTC	1 cut(s)	1722
PfeI	GAWTC	2 cut(s)	1481, 1835
PflFI	GACNNNGTC	1 cut(s)	1519
PfoI	TCCNGGA	1 cut(s)	1167
PkrI	GCNGC	6 cut(s)	663, 835, 838, 1576, 1791, 1908
PleI	GAGTC	2 cut(s)	275, 1081
PmaCI	CACGTG	1 cut(s)	1343
PmlI	CACGTG	1 cut(s)	1343
PpsI	GAGTC	2 cut(s)	275, 1081
Ppu21I	YACGTR	1 cut(s)	1343
Psp6I	CCWGG	1 cut(s)	597
PspCI	CACGTG	1 cut(s)	1343
PspFI	CCCAGC	1 cut(s)	788
PspGI	CCWGG	1 cut(s)	597
PspN4I	GGNNCC	3 cut(s)	431, 552, 1618
PspPI	GGNCC	4 cut(s)	199, 601, 1189, 1852
PstI	CTGCAG	2 cut(s)	666, 772
PstNI	CAGNNNCTG	1 cut(s)	1238
PsuI	RGATCY	3 cut(s)	550, 1616, 1640
PsyI	GACNNNGTC	1 cut(s)	1519
RsaI	GTAC	3 cut(s)	728, 1379, 2049
RsaNI	GTAC	3 cut(s)	727, 1378, 2048
RseI	CAYNNNNRTG	3 cut(s)	324, 1152, 1517
SapI	GCTCTTC	1 cut(s)	590
SaqAI	TTAA	9 cut(s)	287, 395, 612, 732, 1083, 1422, 1955, 2033, 2067
SatI	GCNGC	6 cut(s)	662, 834, 837, 1575, 1790, 1907
Sau3AI	GATC	6 cut(s)	63, 550, 735, 901, 1616, 1640
Sau96I	GGNCC	4 cut(s)	199, 601, 1189, 1852
ScaI	AGTACT	1 cut(s)	1379
SchI	GAGTC	2 cut(s)	276, 1081
ScrFI	CCNGG	2 cut(s)	599, 1169
SduI	GDGCHC	3 cut(s)	598, 973, 1360
SfaNI	GCATC	7 cut(s)	97, 244, 1119, 1346, 1586, 1634, 1763
SfcI	CTRYAG	3 cut(s)	314, 662, 768
SinI	GGWCC	4 cut(s)	199, 601, 1189, 1852
SmiMI	CAYNNNNRTG	3 cut(s)	324, 1152, 1517
SmlI	CTYRAG	2 cut(s)	1022, 1636
SmoI	CTYRAG	2 cut(s)	1022, 1636
SsiI	CCGC	4 cut(s)	48, 565, 608, 1967
SspMI	CTAG	6 cut(s)	23, 978, 1010, 1103, 1734, 2131
StyD4I	CCNGG	2 cut(s)	597, 1167
StyI	CCWWGG	1 cut(s)	1620
TaaI	ACNGT	8 cut(s)	208, 605, 851, 1186, 1428, 1519, 1770, 2075
TaiI	ACGT	4 cut(s)	186, 996, 1322, 1345
TaqI	TCGA	2 cut(s)	178, 539
TaqII	GACCGA	1 cut(s)	392
TatI	WGTACW	1 cut(s)	1377
TfiI	GAWTC	2 cut(s)	1481, 1835
Tru1I	TTAA	9 cut(s)	287, 395, 612, 732, 1083, 1422, 1955, 2033, 2067
Tru9I	TTAA	9 cut(s)	287, 395, 612, 732, 1083, 1422, 1955, 2033, 2067
TscAI	CASTG	7 cut(s)	211, 1191, 1433, 1660, 1698, 1773, 2078
TseFI	GTSAC	2 cut(s)	872, 1658
TseI	GCWGC	6 cut(s)	661, 833, 836, 1574, 1789, 1906
Tsp45I	GTSAC	2 cut(s)	872, 1658
TspDTI	ATGAA	9 cut(s)	17, 128, 795, 943, 1136, 1601, 1827, 2052, 2073
TspGWI	ACGGA	4 cut(s)	326, 557, 703, 986
TspRI	CASTG	7 cut(s)	211, 1191, 1433, 1660, 1698, 1773, 2078
Tth111I	GACNNNGTC	1 cut(s)	1519
VpaK11BI	GGWCC	4 cut(s)	199, 601, 1189, 1852
XapI	RAATTY	3 cut(s)	298, 415, 498
XmiI	GTMKAC	1 cut(s)	2127
XmnI	GAANNNNTTC	1 cut(s)	1722
XspI	CTAG	6 cut(s)	23, 978, 1010, 1103, 1734, 2131
ZraI	GACGTC	1 cut(s)	994
ZrmI	AGTACT	1 cut(s)	1379

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.