Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp03

Orthogroup ID

OG0000969

Physical Location & Seq

Genomic Coordinates Reverse (-)

1300146 .. 1305082

Gene Structure 4937 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.3G018300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2856 bp

ATGATGGAGAAGTCATGCACTCTCCTCGTCCACTTCGACAAAGGCACACCAGCCCTAGCCAACGAGATTAAAGAAGCCCTTGAAGGAAACGACGTCGAATTGAAGATCGAAGCCCTCAAGAAGGCCATCATGCTCCTCCTCAACGGCGACACCATTCCCCACCTCTTTATCACCATCATCCGATACGTACTGCCCTCCGAGGACCACACAGTCCAGAAGCTCCTCCTCCTCTACCTTGAGATCGTAGAGAAAACCGACTCCAAAGGCAAGATCCTCCCGGAGATGATCCTCATCTGCCAGAACCTCCGCAACAATCTTCAGCACCCGAACGAGTACATCCGAGGCGTTACGCTGCGATTTCTCTGCCGATTGAACGAGGCCGAGATCATCGAGCCTCTGATCCCTTCGATTCTCACCAATTTGGAGCACCGCCACCCATTTGTTCGACGAAATGCCGTGCTGGCGATCATGTTCGTGTATAGGCTTCCGCAGGGGGAGACATTGCTGGATAGCGCGCCGGAGATCATCGATCGGTTCTTGGCCTCCGAGCAGGACCCTTCCAGTAAGCGAAATGCTTTCCTTATGCTCTTTAATTGCGCGCAAGATAGGGCTGTGAATTATTTGTTTACACATATCAGTAGGATTATTGAGTGGGGGGAACAGCTCCAAATGGTCGTGTTGGAATTGATTAAGAAGGTCTGTAGAGTGAATAAGGGTGAGAAATCCAAGTACATTAAGATTATTATATCGTTGCTGGATGCACCGTCGAGTGCCGTTGTTTATGAGTGTGCTGGAACGCTTGTGTCGTTGTCTTCGGCACCTACGGCCATAAAAGCAGCAGCCAACACTTATTCTCAGTTGTTGTTGTCGCAGAGCGATAACAATGTGAAGTTGATTTTGCTGGATAGGATTAGTGAGCTCAAGGCTTCGCATAGGGAGATTATGGTTGAGTTGGTTATGGATGTGCTGAGGGCACTGTCAAGTCCGAATGTGGATATTAGGAGGAAGACTCTTGATATTGTGCTTGATTTGATTACTTCCCGGAATATTAATCAGGTTGTGATGATGTTGAAGAAGGAGGTCGTGAAGACCCAGAGTGGGGAGCTTGAGAAGAACGGGGAGTATAGGCAGATGTTAGTGCAAGCAATATATGCATGCGCAGTTAAGTTTCCTGAGGTGGCGAGCACGGTGGTGCATCCTTTGATGGATTTCTTGGGCGATACCAATGTTGCTTCAGCCCTGGATGTGGCTGCTTTTGTGCGTGAGATTATTGAAACCAACCCCAAGCTGCGTGTTTCTGTAATAACGAGGCTGCTAGATACTTTCTACCAGATCCGCAATTCGAGGGTTTGCACTCATTCCCTCTGGATTATCGGGGAGTATTGTCTCTCGCTCTCTGAAGTTGAGAGTGGGATTGCAACCATTAAGCAGTGTCTTGGGGATCTCCCATTTTACACAGCTTCTGAGGAAAAAGAGGCACAAGATGCTACAAAGAATTCTCAGGTGGTAAGCTCGACCACTGTGTCTTCTAGGAGGCCTGTGATCCTTGCAGATGGGACCTATGCCACCCAGTCTGCTGCACTGGAAACTGCTATGTCTGCACCTGTCCTGGTTCAAGGATCTTTGGCTTCCGTGGGGAACTTGAGATCATTGATTCTCTCGGGTGATTTTTTCCTTGAGACAGTTGTAGCTTGCACATTAACAAAGCTGGTTTTGAGATTGGAAGAGATTCAGCCTTCAAAGGCTGAAGTGAACAAGGCAACTACACAGGCATTGTTGATCATGGTCTCTATGCTTCAATTGGGTCAATCCTCGGTCCTTCCACATCCGATTGATAATGATTCTCGAGATAGAATAGTTCTTTGCATCAGGTTACTATGCCATAAAGGTGAAGAAGTGAGGAAGATATGGCTAGAGTCATGCAGACAGAGCTTTGTGAAAATGCTTGCAGATAAGCAGCTCCTCGAAACAGAGGAAACTAAAGCTAAAGCCCAGATATTGAGTGCACAACCAGATGACCTTATTGATTTCTACCATCTTAAGAGCAGAAAGGGTTTGAGCCAGCTCGAGTTGGAAGATGCGGTTCAAGATGATCTCAAACGTGCTACTGGAGAATTCACAAAGGATAGAGATGATGCAAACAAACTCAACCGCATTCTTCAACTCACAGGATTCAGTGATCCTGTTTATGCTGAAGCCTATGTAACAGTTAATCATTATGACATTGTTCTTGATGTTACCGTCATCAATCGAACCAAGGAAACCCTTCAGAATTTGTGCTTGGAGTTGGCGACAATGGGTGATCTGAAACTTGTTGAGCGTCCACAAAACTATACGCTAGCTCCGGAATCAAGCAAACAGATAAAGGCTAACATTAAGGTCTCTTCAACTGAAACGGGAGTTATATTCGGTAACATTGTATATGAGACTTCTTCAAATGTGCTTGAGAGAACAGTTATTGTTCTCAATGACATTCATATTGATATAATGGATTACATCTCTCCTGCGTCATGTGCTGACGTGTCATTTAGGACAATGTGGGCTGAGTTTGAGTGGGAGAACAAGGTTGCTGTAAATACTGTTATTCAGGACGAGAAGGAATTTCTGAATCATGTTGTTAAAGCGACTAACATGAAGTGCCTGACTCCACCATTGGCACTGGAAGGAGAATGTGGAGTCCTCGCTGCCAATCTGTACGCAAAGAGTGTTTTCGGGGAGGATGCTTTGGTGAATGTGAGTGTTGAGAAACAAGCAGATGGTAAGCTCAGTGGATACATCAGAATTAGAAGCAAGACTCAAGGCATTGCCCTCAGTCTCGGGGACAAGATCACCTTGAAACAAAAGGGCGGCCTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005798 GO:0005829 GO:0005911 GO:0006810 GO:0006888 GO:0006890 GO:0006891 GO:0008150 GO:0009506 GO:0012505 GO:0012506 GO:0016020 GO:0016192 GO:0030054 GO:0030117 GO:0030120 GO:0030126 GO:0030135 GO:0030137 GO:0030659 GO:0030660 GO:0030662 GO:0030663 GO:0031090 GO:0031410 GO:0031982 GO:0032991 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044431 GO:0044433 GO:0044444 GO:0044446 GO:0044464 GO:0046907 GO:0048193 GO:0048475 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0055044 GO:0097708 GO:0098588 GO:0098796 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Adaptin_N Coatamer_beta_C Coatomer_b_Cpla

Protein Analysis

952

Amino Acids

106.17

Weight (kDa)

5.77

Isoelectric Point (pI)

44.78

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000969)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G31480 AT4G31480 AT4G31480 AT4G31480 AT4G31480 AT4G31480 AT4G31480 AT4G31480 AT4G31480 AT4G31490 AT4G31490 AT4G31490
fragaria_vesca	FvH4_4g12700 FvH4_4g12700 FvH4_4g12700 FvH4_6g37230 FvH4_6g37230 FvH4_6g37230
malus_domestica	MD04G1023700.v1.1 MD09G1159400.v1.1 MD13G1280100.v1.1 MD17G1145600.v1.1
prunus_persica	Prupe.3G018300_v2.0.a1 Prupe.3G018400_v2.0.a1
pyrus_communis	pycom04g02030 pycom09g07780 pycom09g18330 pycom13g29300 pycom15g32330 pycom15g32340 pycom17g13850
rosa_chinensis	RchiOBHm_Chr2g0149941 RchiOBHm_Chr2g0149961 RchiOBHm_Chr2g0149991 RchiOBHm_Chr4g0411591
rosa_laevigata	RLG00000008343 RLG00000020457 RLG00000020458
rosa_multiflora	Rmu_sc0001899.1_g000002 Rmu_sc0006550.1_g000008
rosa_roxburghii	Rroxscaffold_2G00097530 Rroxscaffold_2G00097540 Rroxscaffold_5G00356170
rosa_rugosa	Rorug02G0417300 Rorug04G0107800
rosa_samantha	Rh2AG476800 Rh2AG476900 Rh2AG477100 Rh2BG488500 Rh2BG488600 Rh2CG462500 Rh2CG462600 Rh2CG462800 Rh2DG497600 Rh2DG497700 Rh4AG169200 Rh4BG166100 Rh4CG180900 Rh4DG163500
rosa_wichuraiana	Rw2G038870 Rw2G038880 Rw2G038900 Rw4G014060

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	209, 1522
AatII	GACGTC	1 cut(s)	96
Acc16I	TGCGCA	1 cut(s)	1159
AccB1I	GGYRCC	1 cut(s)	817
AccII	CGCG	2 cut(s)	515, 599
AccIII	TCCGGA	1 cut(s)	2344
AciI	CCGC	7 cut(s)	307, 430, 488, 1336, 2081, 2152, 2847
AclWI	GGATC	8 cut(s)	265, 280, 394, 1327, 1449, 1537, 1627, 2174
AcoI	YGGCCR	1 cut(s)	825
AcsI	RAATTY	4 cut(s)	1495, 2114, 2272, 2600
AcuI	CTGAAG	6 cut(s)	302, 1218, 1419, 1767, 2214, 2252
AcyI	GRCGYC	1 cut(s)	93
AfaI	GTAC	4 cut(s)	189, 335, 731, 2696
AfiI	CCNNNNNNNGG	4 cut(s)	121, 1098, 1099, 1246
AflII	CTTAAG	1 cut(s)	2039
AflIII	ACRYGT	1 cut(s)	2520
AjiI	CACGTC	1 cut(s)	2521
AjnI	CCWGG	2 cut(s)	1239, 1608
AjuI	GAANNNNNNNTTGG	2 cut(s)	2264, 2296
AleI	CACNNNNGTG	1 cut(s)	1190
Alw21I	GWGCWC	4 cut(s)	429, 921, 1187, 2008
Alw26I	GTCTC	7 cut(s)	491, 1391, 1673, 1792, 2386, 2420, 2819
Alw44I	GTGCAC	1 cut(s)	2004
AlwI	GGATC	8 cut(s)	265, 280, 394, 1327, 1449, 1537, 1627, 2174
AlwNI	CAGNNNCTG	1 cut(s)	1463
Ama87I	CYCGRG	4 cut(s)	1660, 1845, 2066, 2816
Aor13HI	TCCGGA	1 cut(s)	2344
AoxI	GGCC	6 cut(s)	123, 378, 540, 825, 1535, 2848
ApaLI	GTGCAC	1 cut(s)	2004
ApeKI	GCWGC	9 cut(s)	352, 836, 839, 1250, 1288, 1312, 1577, 1957, 2684
ApoI	RAATTY	4 cut(s)	1495, 2114, 2272, 2600
AseI	ATTAAT	1 cut(s)	1050
Asp700I	GAANNNNTTC	2 cut(s)	1728, 2265
AspLEI	GCGC	5 cut(s)	515, 517, 599, 601, 1160
AspS9I	GGNCC	4 cut(s)	202, 553, 1557, 1816
AsuC2I	CCSGG	2 cut(s)	278, 1042
AsuHPI	GGTGA	8 cut(s)	163, 406, 728, 1676, 1901, 2312, 2740, 2821
AsuNHI	GCTAGC	1 cut(s)	2338
AvaI	CYCGRG	4 cut(s)	1660, 1845, 2066, 2816
AvaII	GGWCC	4 cut(s)	202, 553, 1557, 1816
AxyI	CCTNAGG	1 cut(s)	1173
BaeGI	GKGCMC	2 cut(s)	976, 2008
BaeI	ACNNNNGTAYC	2 cut(s)	1212, 1245
BanI	GGYRCC	1 cut(s)	817
BanII	GRGCYC	1 cut(s)	921
BbsI	GAAGAC	4 cut(s)	804, 1013, 1094, 1518
Bbv12I	GWGCWC	4 cut(s)	429, 921, 1187, 2008
BbvCI	CCTCAGC	1 cut(s)	968
BbvI	GCAGC	9 cut(s)	339, 848, 851, 1237, 1275, 1299, 1564, 1969, 2671
BccI	CCATC	6 cut(s)	134, 182, 1198, 1547, 2043, 2750
BceAI	ACGGC	4 cut(s)	160, 440, 758, 840
BcgI	CGANNNNNNTGC	4 cut(s)	7, 41, 345, 379
BciT130I	CCWGG	2 cut(s)	1241, 1610
BciVI	GTATCC	1 cut(s)	2765
BclI	TGATCA	1 cut(s)	1779
BcnI	CCSGG	2 cut(s)	278, 1042
BcoDI	GTCTC	7 cut(s)	491, 1391, 1673, 1792, 2386, 2420, 2819
BfaI	CTAG	5 cut(s)	56, 1316, 1530, 1913, 2339
BfmI	CTRYAG	1 cut(s)	700
BfrI	CTTAAG	1 cut(s)	2039
BfuI	GTATCC	1 cut(s)	2765
BglI	GCCNNNNNGGC	1 cut(s)	461
Bme1390I	CCNGG	4 cut(s)	278, 1042, 1241, 1610
Bme18I	GGWCC	4 cut(s)	202, 553, 1557, 1816
BmeT110I	CYCGRG	4 cut(s)	1660, 1845, 2066, 2816
BmgBI	CACGTC	1 cut(s)	2521
BmgT120I	GGNCC	4 cut(s)	202, 553, 1557, 1816
BmiI	GGNNCC	3 cut(s)	555, 819, 1558
BmrFI	CCNGG	4 cut(s)	278, 1042, 1241, 1610
BmrI	ACTGGG	1 cut(s)	1564
BmsI	GCATC	7 cut(s)	748, 1204, 1474, 1875, 2068, 2125, 2710
BmtI	GCTAGC	1 cut(s)	2342
BmuI	ACTGGG	1 cut(s)	1564
BpiI	GAAGAC	4 cut(s)	804, 1013, 1094, 1518
BplI	GAGNNNNNCTC	2 cut(s)	994, 1026
BpmI	CTGGAG	1 cut(s)	2130
Bpu10I	CCTNAGC	1 cut(s)	968
BpuEI	CTTGAG	8 cut(s)	101, 257, 905, 1127, 1663, 1697, 2465, 2781
BpuMI	CCSGG	2 cut(s)	278, 1042
Bsa29I	ATCGAT	1 cut(s)	528
BsaAI	YACGTR	1 cut(s)	187
BsaBI	GATNNNNATC	1 cut(s)	290
BsaHI	GRCGYC	1 cut(s)	93
BsaI	GGTCTC	2 cut(s)	1792, 2386
BsaJI	CCNNGG	6 cut(s)	198, 340, 1239, 1632, 1812, 2256
BsaWI	WCCGGW	1 cut(s)	2344
BsaXI	ACNNNNNCTCC	2 cut(s)	2326, 2356
Bsc4I	CCNNNNNNNGG	4 cut(s)	121, 1098, 1099, 1246
Bse1I	ACTGG	5 cut(s)	561, 1570, 1587, 2113, 2664
Bse21I	CCTNAGG	1 cut(s)	1173
Bse3DI	GCAATG	2 cut(s)	500, 2802
Bse8I	GATNNNNATC	1 cut(s)	290
BseAI	TCCGGA	1 cut(s)	2344
BseBI	CCWGG	2 cut(s)	1241, 1610
BseCI	ATCGAT	1 cut(s)	528
BseDI	CCNNGG	6 cut(s)	198, 340, 1239, 1632, 1812, 2256
BseGI	GGATG	8 cut(s)	177, 336, 763, 967, 1195, 1249, 1825, 2725
BseJI	GATNNNNATC	1 cut(s)	290
BseLI	CCNNNNNNNGG	4 cut(s)	121, 1098, 1099, 1246
BseMI	GCAATG	2 cut(s)	500, 2802
BseMII	CTCAG	8 cut(s)	869, 959, 1164, 1455, 1514, 2535, 2779, 2824
BseNI	ACTGG	5 cut(s)	561, 1570, 1587, 2113, 2664
BsePI	GCGCGC	2 cut(s)	513, 597
BseRI	GAGGAG	7 cut(s)	14, 125, 128, 212, 215, 218, 1952
BseSI	GKGCMC	2 cut(s)	976, 2008
BseXI	GCAGC	9 cut(s)	339, 848, 851, 1237, 1275, 1299, 1564, 1969, 2671
BsgI	GTGCAG	2 cut(s)	1563, 1584
Bsh1236I	CGCG	2 cut(s)	515, 599
Bsh1285I	CGRYCG	1 cut(s)	532
BshFI	GGCC	6 cut(s)	125, 380, 542, 827, 1537, 2850
BshNI	GGYRCC	1 cut(s)	817
BshVI	ATCGAT	1 cut(s)	528
BsiEI	CGRYCG	1 cut(s)	532
BsiHKAI	GWGCWC	4 cut(s)	429, 921, 1187, 2008
BsiHKCI	CYCGRG	4 cut(s)	1660, 1845, 2066, 2816
BsiSI	CCGG	4 cut(s)	278, 518, 1042, 2345
BslFI	GGGAC	2 cut(s)	1570, 2834
BslI	CCNNNNNNNGG	4 cut(s)	121, 1098, 1099, 1246
BsmAI	GTCTC	7 cut(s)	491, 1391, 1673, 1792, 2386, 2420, 2819
BsmFI	GGGAC	2 cut(s)	1570, 2834
BsmI	GAATGC	1 cut(s)	2154
BsnI	GGCC	6 cut(s)	125, 380, 542, 827, 1537, 2850
Bso31I	GGTCTC	2 cut(s)	1792, 2386
BsoBI	CYCGRG	4 cut(s)	1660, 1845, 2066, 2816
Bsp1286I	GDGCHC	5 cut(s)	429, 921, 976, 1187, 2008
Bsp13I	TCCGGA	1 cut(s)	2344
BspACI	CCGC	7 cut(s)	307, 430, 488, 1336, 2081, 2152, 2847
BspANI	GGCC	6 cut(s)	125, 380, 542, 827, 1537, 2850
BspCNI	CTCAG	8 cut(s)	868, 960, 1165, 1456, 1513, 2536, 2778, 2823
BspDI	ATCGAT	1 cut(s)	528
BspEI	TCCGGA	1 cut(s)	2344
BspFNI	CGCG	2 cut(s)	515, 599
BspLI	GGNNCC	3 cut(s)	555, 819, 1558
BspOI	GCTAGC	1 cut(s)	2342
BspPI	GGATC	8 cut(s)	265, 280, 394, 1327, 1449, 1537, 1627, 2174
BspT107I	GGYRCC	1 cut(s)	817
BspTI	CTTAAG	1 cut(s)	2039
BspTNI	GGTCTC	2 cut(s)	1792, 2386
BsrDI	GCAATG	2 cut(s)	500, 2802
BsrI	ACTGG	5 cut(s)	561, 1570, 1587, 2113, 2664
BssECI	CCNNGG	6 cut(s)	198, 340, 1239, 1632, 1812, 2256
BssHII	GCGCGC	2 cut(s)	513, 597
BssNI	GRCGYC	1 cut(s)	93
BssT1I	CCWWGG	1 cut(s)	2256
Bst2UI	CCWGG	2 cut(s)	1241, 1610
Bst6I	CTCTTC	2 cut(s)	1719, 2389
BstACI	GRCGYC	1 cut(s)	93
BstAFI	CTTAAG	1 cut(s)	2039
BstAPI	GCANNNNNTGC	2 cut(s)	1151, 1484
BstBAI	YACGTR	1 cut(s)	187
BstDEI	CTNAG	8 cut(s)	855, 968, 1173, 1464, 1500, 2544, 2765, 2810
BstDSI	CCRYGG	1 cut(s)	1632
BstENI	CCTNNNNNAGG	1 cut(s)	119
BstF5I	GGATG	8 cut(s)	177, 336, 763, 967, 1195, 1249, 1825, 2725
BstFNI	CGCG	2 cut(s)	515, 599
BstHHI	GCGC	5 cut(s)	515, 517, 599, 601, 1160
BstMAI	GTCTC	7 cut(s)	491, 1391, 1673, 1792, 2386, 2420, 2819
BstMCI	CGRYCG	1 cut(s)	532
BstMWI	GCNNNNNNNGC	8 cut(s)	461, 824, 833, 1151, 1484, 1598, 1929, 2513
BstNI	CCWGG	2 cut(s)	1241, 1610
BstNSI	RCATGY	1 cut(s)	1158
BstSCI	CCNGG	4 cut(s)	276, 1040, 1239, 1608
BstSFI	CTRYAG	1 cut(s)	700
BstSLI	GKGCMC	2 cut(s)	976, 2008
BstSNI	TACGTA	1 cut(s)	187
BstUI	CGCG	2 cut(s)	515, 599
BstV1I	GCAGC	9 cut(s)	339, 848, 851, 1237, 1275, 1299, 1564, 1969, 2671
BstV2I	GAAGAC	4 cut(s)	804, 1013, 1094, 1518
BstX2I	RGATCY	4 cut(s)	270, 1332, 1441, 1619
BstYI	RGATCY	4 cut(s)	270, 1332, 1441, 1619
Bsu15I	ATCGAT	1 cut(s)	528
Bsu36I	CCTNAGG	1 cut(s)	1173
BsuI	GTATCC	1 cut(s)	2765
BsuRI	GGCC	6 cut(s)	125, 380, 542, 827, 1537, 2850
BsuTUI	ATCGAT	1 cut(s)	528
BtgI	CCRYGG	1 cut(s)	1632
BtrI	CACGTC	1 cut(s)	2521
BtsCI	GGATG	8 cut(s)	177, 336, 763, 967, 1195, 1249, 1825, 2725
BtsI	GCAGTG	1 cut(s)	1436
BtsIMutI	CAGTG	7 cut(s)	974, 1436, 1518, 1580, 2182, 2657, 2773
CaiI	CAGNNNCTG	1 cut(s)	1463
CfoI	GCGC	5 cut(s)	515, 517, 599, 601, 1160
Cfr13I	GGNCC	4 cut(s)	202, 553, 1557, 1816
ClaI	ATCGAT	1 cut(s)	528
CseI	GACGC	2 cut(s)	2309, 2496
Csp6I	GTAC	4 cut(s)	188, 334, 730, 2695
CviAII	CATG	9 cut(s)	15, 130, 469, 1155, 1783, 1920, 2511, 2612, 2632
CviQI	GTAC	4 cut(s)	188, 334, 730, 2695
DdeI	CTNAG	8 cut(s)	855, 968, 1173, 1464, 1500, 2544, 2765, 2810
DrdI	GACNNNNNNGTC	2 cut(s)	209, 1522
DseDI	GACNNNNNNGTC	2 cut(s)	209, 1522
EaeI	YGGCCR	1 cut(s)	825
Eam1104I	CTCTTC	2 cut(s)	1719, 2389
EarI	CTCTTC	2 cut(s)	1719, 2389
Ecl136II	GAGCTC	1 cut(s)	919
Eco105I	TACGTA	1 cut(s)	187
Eco130I	CCWWGG	1 cut(s)	2256
Eco147I	AGGCCT	1 cut(s)	1537
Eco24I	GRGCYC	1 cut(s)	921
Eco31I	GGTCTC	2 cut(s)	1792, 2386
Eco47I	GGWCC	4 cut(s)	202, 553, 1557, 1816
Eco53kI	GAGCTC	1 cut(s)	919
Eco57I	CTGAAG	6 cut(s)	302, 1218, 1419, 1767, 2214, 2252
Eco81I	CCTNAGG	1 cut(s)	1173
Eco88I	CYCGRG	4 cut(s)	1660, 1845, 2066, 2816
EcoICRI	GAGCTC	1 cut(s)	919
EcoNI	CCTNNNNNAGG	1 cut(s)	119
EcoO109I	RGGNCCY	2 cut(s)	553, 1557
EcoRI	GAATTC	2 cut(s)	1495, 2114
EcoRII	CCWGG	2 cut(s)	1239, 1608
EcoT14I	CCWWGG	1 cut(s)	2256
EcoT22I	ATGCAT	1 cut(s)	1156
EcoT38I	GRGCYC	1 cut(s)	921
ErhI	CCWWGG	1 cut(s)	2256
FaeI	CATG	9 cut(s)	18, 133, 472, 1158, 1786, 1923, 2514, 2615, 2635
FalI	AAGNNNNNCTT	4 cut(s)	63, 95, 2816, 2848
FaqI	GGGAC	2 cut(s)	1570, 2834
FatI	CATG	9 cut(s)	14, 129, 468, 1154, 1782, 1919, 2510, 2611, 2631
FbaI	TGATCA	1 cut(s)	1779
FokI	GGATG	8 cut(s)	164, 323, 770, 974, 1182, 1256, 1812, 2732
FriOI	GRGCYC	1 cut(s)	921
FspBI	CTAG	5 cut(s)	56, 1316, 1530, 1913, 2339
FspI	TGCGCA	1 cut(s)	1159
GlaI	GCGC	5 cut(s)	514, 516, 598, 600, 1159
GsuI	CTGGAG	1 cut(s)	2130
HaeIII	GGCC	6 cut(s)	125, 380, 542, 827, 1537, 2850
HapII	CCGG	4 cut(s)	278, 518, 1042, 2345
HgaI	GACGC	2 cut(s)	2309, 2496
HhaI	GCGC	5 cut(s)	515, 517, 599, 601, 1160
Hin1I	GRCGYC	1 cut(s)	93
Hin1II	CATG	9 cut(s)	18, 133, 472, 1158, 1786, 1923, 2514, 2615, 2635
Hin6I	GCGC	5 cut(s)	513, 515, 597, 599, 1158
HinP1I	GCGC	5 cut(s)	513, 515, 597, 599, 1158
HpaII	CCGG	4 cut(s)	278, 518, 1042, 2345
HphI	GGTGA	8 cut(s)	163, 406, 728, 1676, 1901, 2312, 2740, 2821
Hpy166II	GTNNAC	5 cut(s)	31, 627, 1753, 2006, 2324
Hpy8I	GTNNAC	5 cut(s)	31, 627, 1753, 2006, 2324
Hpy99I	CGWCG	4 cut(s)	95, 98, 450, 769
HpyCH4IV	ACGT	4 cut(s)	93, 186, 2101, 2520
HpyF10VI	GCNNNNNNNGC	8 cut(s)	461, 824, 833, 1151, 1484, 1598, 1929, 2513
HpyF3I	CTNAG	8 cut(s)	855, 968, 1173, 1464, 1500, 2544, 2765, 2810
HpySE526I	ACGT	4 cut(s)	93, 186, 2101, 2520
Hsp92I	GRCGYC	1 cut(s)	93
Hsp92II	CATG	9 cut(s)	18, 133, 472, 1158, 1786, 1923, 2514, 2615, 2635
HspAI	GCGC	5 cut(s)	513, 515, 597, 599, 1158
Kpn2I	TCCGGA	1 cut(s)	2344
Ksp22I	TGATCA	1 cut(s)	1779
LmnI	GCTCC	7 cut(s)	138, 225, 424, 669, 1102, 1965, 2347
Lsp1109I	GCAGC	9 cut(s)	339, 848, 851, 1237, 1275, 1299, 1564, 1969, 2671
LweI	GCATC	7 cut(s)	748, 1204, 1474, 1875, 2068, 2125, 2710
MaeI	CTAG	5 cut(s)	56, 1316, 1530, 1913, 2339
MaeII	ACGT	4 cut(s)	93, 186, 2101, 2520
MaeIII	GTNAC	5 cut(s)	346, 1872, 2203, 2236, 2411
MfeI	CAATTG	1 cut(s)	1799
MflI	RGATCY	4 cut(s)	270, 1332, 1441, 1619
MhlI	GDGCHC	5 cut(s)	429, 921, 976, 1187, 2008
MlyI	GAGTC	6 cut(s)	251, 1003, 1925, 2638, 2685, 2788
MmeI	TCCRAC	2 cut(s)	660, 2052
Mph1103I	ATGCAT	1 cut(s)	1156
MroI	TCCGGA	1 cut(s)	2344
MroXI	GAANNNNTTC	2 cut(s)	1728, 2265
MslI	CAYNNNNRTG	3 cut(s)	473, 1190, 1887
MspCI	CTTAAG	1 cut(s)	2039
MspI	CCGG	4 cut(s)	278, 518, 1042, 2345
MspR9I	CCNGG	4 cut(s)	278, 1042, 1241, 1610
MunI	CAATTG	1 cut(s)	1799
Mva1269I	GAATGC	1 cut(s)	2154
MvaI	CCWGG	2 cut(s)	1241, 1610
MvnI	CGCG	2 cut(s)	515, 599
MwoI	GCNNNNNNNGC	8 cut(s)	461, 824, 833, 1151, 1484, 1598, 1929, 2513
NciI	CCSGG	2 cut(s)	278, 1042
NheI	GCTAGC	1 cut(s)	2338
NlaIII	CATG	9 cut(s)	18, 133, 472, 1158, 1786, 1923, 2514, 2615, 2635
NlaIV	GGNNCC	3 cut(s)	555, 819, 1558
NmeAIII	GCCGAG	1 cut(s)	406
NsbI	TGCGCA	1 cut(s)	1159
NsiI	ATGCAT	1 cut(s)	1156
NspI	RCATGY	1 cut(s)	1158
OliI	CACNNNNGTG	1 cut(s)	1190
PaeI	GCATGC	1 cut(s)	1158
PaeR7I	CTCGAG	2 cut(s)	1845, 2066
PauI	GCGCGC	2 cut(s)	513, 597
PceI	AGGCCT	1 cut(s)	1537
PcsI	WCGNNNNNNNCGW	2 cut(s)	33, 803
PctI	GAATGC	1 cut(s)	2154
PdmI	GAANNNNTTC	2 cut(s)	1728, 2265
PfeI	GAWTC	7 cut(s)	409, 1654, 1729, 1841, 2172, 2348, 2608
PfoI	TCCNGGA	2 cut(s)	276, 1040
Ple19I	CGATCG	1 cut(s)	532
PleI	GAGTC	6 cut(s)	251, 1003, 1924, 2638, 2684, 2788
PpsI	GAGTC	6 cut(s)	251, 1003, 1924, 2638, 2684, 2788
Ppu21I	YACGTR	1 cut(s)	187
PpuMI	RGGWCCY	2 cut(s)	553, 1557
PshBI	ATTAAT	1 cut(s)	1050
Psp124BI	GAGCTC	1 cut(s)	921
Psp5II	RGGWCCY	2 cut(s)	553, 1557
Psp6I	CCWGG	2 cut(s)	1239, 1608
PspGI	CCWGG	2 cut(s)	1239, 1608
PspN4I	GGNNCC	3 cut(s)	555, 819, 1558
PspPI	GGNCC	4 cut(s)	202, 553, 1557, 1816
PspPPI	RGGWCCY	2 cut(s)	553, 1557
PspXI	VCTCGAGB	1 cut(s)	2066
PstNI	CAGNNNCTG	1 cut(s)	1463
PsuI	RGATCY	4 cut(s)	270, 1332, 1441, 1619
PteI	GCGCGC	2 cut(s)	513, 597
PvuI	CGATCG	1 cut(s)	532
RsaI	GTAC	4 cut(s)	189, 335, 731, 2696
RsaNI	GTAC	4 cut(s)	188, 334, 730, 2695
RseI	CAYNNNNRTG	3 cut(s)	473, 1190, 1887
SacI	GAGCTC	1 cut(s)	921
Sau96I	GGNCC	4 cut(s)	202, 553, 1557, 1816
SchI	GAGTC	6 cut(s)	251, 1003, 1925, 2638, 2685, 2788
ScrFI	CCNGG	4 cut(s)	278, 1042, 1241, 1610
SduI	GDGCHC	5 cut(s)	429, 921, 976, 1187, 2008
SfaNI	GCATC	7 cut(s)	748, 1204, 1474, 1875, 2068, 2125, 2710
SfcI	CTRYAG	1 cut(s)	700
Sfr274I	CTCGAG	2 cut(s)	1845, 2066
SinI	GGWCC	4 cut(s)	202, 553, 1557, 1816
SlaI	CTCGAG	2 cut(s)	1845, 2066
SmiMI	CAYNNNNRTG	3 cut(s)	473, 1190, 1887
SnaBI	TACGTA	1 cut(s)	187
SphI	GCATGC	1 cut(s)	1158
SseBI	AGGCCT	1 cut(s)	1537
SsiI	CCGC	7 cut(s)	307, 430, 488, 1336, 2081, 2152, 2847
SspI	AATATT	1 cut(s)	1048
SspMI	CTAG	5 cut(s)	56, 1316, 1530, 1913, 2339
SstI	GAGCTC	1 cut(s)	921
StuI	AGGCCT	1 cut(s)	1537
StyD4I	CCNGG	4 cut(s)	276, 1040, 1239, 1608
StyI	CCWWGG	1 cut(s)	2256
TaiI	ACGT	4 cut(s)	96, 189, 2104, 2523
TaqII	GACCGA	1 cut(s)	1804
TatI	WGTACW	2 cut(s)	333, 729
TauI	GCSGC	1 cut(s)	2850
TfiI	GAWTC	7 cut(s)	409, 1654, 1729, 1841, 2172, 2348, 2608
TscAI	CASTG	7 cut(s)	981, 1436, 1525, 1587, 2182, 2664, 2773
TseI	GCWGC	9 cut(s)	352, 836, 839, 1250, 1288, 1312, 1577, 1957, 2684
TspDTI	ATGAA	2 cut(s)	2465, 2648
TspGWI	ACGGA	1 cut(s)	1621
TspRI	CASTG	7 cut(s)	981, 1436, 1525, 1587, 2182, 2664, 2773
Vha464I	CTTAAG	1 cut(s)	2039
VneI	GTGCAC	1 cut(s)	2004
VpaK11BI	GGWCC	4 cut(s)	202, 553, 1557, 1816
VspI	ATTAAT	1 cut(s)	1050
XagI	CCTNNNNNAGG	1 cut(s)	119
XapI	RAATTY	4 cut(s)	1495, 2114, 2272, 2600
XceI	RCATGY	1 cut(s)	1158
XhoI	CTCGAG	2 cut(s)	1845, 2066
XmnI	GAANNNNTTC	2 cut(s)	1728, 2265
XspI	CTAG	5 cut(s)	56, 1316, 1530, 1913, 2339
ZraI	GACGTC	1 cut(s)	94
Zsp2I	ATGCAT	1 cut(s)	1156

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.