MD17G1145600.v1.1

The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr17
Physical Location & Seq
Reverse (-)
13129912 .. 13134578
4667 bp
Loading structure...
UTR
Exon/CDS
Intron
MD17G1145600.v1.1.491

Sequence Viewer

Length: 3090 bp
ATGATCCAACTTATTGGTTTGGTAATTTTCCTTGACCCAACCCAACCCAACCCAATTTCTTTGGCCCAATCCAACTGTTCCTCTCACTCCCTCCCCACCGCGCTCTCTCTCGTCCACCCACACCAATCCCCACCATCCAAACAGACACCCAGATCTCCTCCGCATTTCTCCGATTCAGATCCGACATTGCCCGTTTCGGATCCGCCGAGATCCAATCCCAATTTCGGATCTTTCCCAATGATGGAGAAGTCCTGCACTCTCCTGGTCCACTTCGACAAGGGCACCCCCGCCCTCGCCAACGAGATCAAGGAAGCCCTCGAAGGAAACGACGTCGAATTGAAGATCGAAGCCCTGAAGAAGGCCATCATGCTCCTCCTCAATGGCGACACCATCCCCCACCTCTTCATCACCATCATCCGCTACGTCCTCCCCTCCGAGGACCACACCGTCCAGAAGCTCCTCCTCCTCTACCTCGAGATCATCGACAAGACCGACTCCAAAGGCAAGGTCCTGCCGGAGATGATTCTCATCTGCCAGAACCTCCGCAACAACCTCCAGTCCCCCAACGAGTACATCCGCGGAGTCACGCTCCGGTTCCTGTGTCGCCTGAACGAGTCCGAGATCATCGAGCCGCTGATCCCCTCGATTCTCGCCAATTTGGAGCACCGCAACCCGTTCGTGCGCCGGAATGCGGTCCTGGCGATCATGTCCGTGTACCGGCTGCCGCTGGGGGAGACGTTGCTGGACAGCGCGCCGGAGATCATAGATCGGTTCTTGGCGTCGGAGCAGGACCCGTCGAGTAAGCGAAACGCTTTCCTTATGCTGTTTAATTGCGCGCAGGATAGGGCTGTGAATTACTTATTTACGCATATCGATAGGATTATTGATTGGGGGGAACAGTTACAGATGGTTGTGTTGGAATTGATTAAGAAGGTCTGTAGGGTTAATAAAGGTGAGAAAGGGAAGTACATTAAGGTTATAATCTCGTTGCTTAATGCCCCGTCTAGTGCCGTTGTTTATGAGTGTGCCGGAACCCTTGTGTCGCTGTCCTCGGCACCTACTGCAATTCGGGCAGCTGCCAATACGTATTGTCAGTTGTTGTTGTCGCAGAGTGATAACAATGTGAAGTTGATTGTGCTGGATAGGATTAGCGAGCTTAAGGCTTCACACAGGGAGATTATGGTTGAGTTGGTTATGGATGTGCTCAGGGCACTGTCAAGTCCGAATGTTGATATTAGGAGGAAGACTCTTGACATTGTGCTTGATTTGATTACCCCCGCGAATGTTGATGAGGTTGTGATGATGTTGAAGAAGGAGGTTGTGAAGACTCAGGGTGGGGAACTTGAGAAGAATGGGGAGTATAGGCAGATGTTGGTGCAAGCAATTTACGCGTGTGCTGTTAAGTTTCCTGAGGTGGCGAGCACGGTTGTGCATCCTTTGATGGATTTCTTGGGCGATTCTAATGTGGCTTCAGCGCTGGACGTGGCAGTTTTTGTGCGTGAGATAATTGAAACCAACCCCAAGCTGCGTGTTTCTATAATAATGAGGCTGCTGGATACTTTCTACCAGATCCGCAATTCCAGGGTGTGTACTCATGCTCTATGGATTATTGGTGAGTATGCTCTCTCGCTTTCGGAGGTTGAGAGTGGGATTGCAACCATTAAGCAGTGTCTTGGGGAGCTTCCATTCTACACTGCTTCTGAGGAAAAGGAGGCACAAGATGCTTCAAAGAACTCTCAGGTGGTAAGCTCGAGCACCGTGTCTTCTAGGAGGCCTGTGATCCTTGCAGACGGGACCTATGCTACCCAATCTGCTGCACTGGAAACTGCTATCTCTGCACCTGTCCTTCAAGGATCTCTGACTTCTGTGGAGAACTTGAGATCATTGGTTCTCTCGGGCGATTTTTTCCTTGAGACAGTTGTGGCTTGCACATTAACAAAGCTTGTTTTAAGATTGGAAGAGATTCAGCCTTCAAAGGTTGAAGTGAACAAGGCAACCACACAGGCATTGTTGATCATGGTCTCTATGCTGCAACTGGGTCAATCCTCAGTCCTTCCACATCCGATTGATAATGACTCTCAAGATAGAATTGTCCTTTGCATCCGATTACTATGCCATAAAGGTGAAGAAGTAAGGAAGATATGGCTAGAGTCATGTAGACAGAGCTTTGTCAAAATGCTTGCCGATAAGCAGCTCCGGGAAACAGAGGAAAGTAAAGCTAAGGCCCAGATATTGAATGCACAACCTGATGACCTTATTGATTTCTACCATCTCAAGAGCAGAAAGGGCATGAGCCAGCTTGAGTTGGAGGATGAGGTCCAATATGATCTCAAACGTGCTACTGGAGAGTTCACAAAGGATAATGATGATGCAAACAAGCTCAACCGCATTCTTCAGCTCACAGGATTCAGTGATCCTGTTTATGCTGAAGCATATGTTACAGTTAATCATTATGACATTGTTCTTGATGTTACTGTCATCAATCGAACAAAGGAAACCCTTCAGAATTTGTGCTTGGAGTTGGCCACTATGGGTGATCTCAAACTTGTTGAGCGTCCTCAAAACTACACACTAGCTCCGGAATCAAGCAAACAGATAAAGGCAAACATTAAGGTCTCTTCAACTGAAACAGGAGTTATATTTGGCAACATTGTATACGAGACTTCTTCAAATGTGCTTGAGAGAACAGTTATTGTCCTCAATGACATCCATATTGATATAATGGATTACATCTCTCCTGCATCATGTGCTGATGTAGCATTTAGGGCAATGTGGGCTGAGTTTGAGTGGGAGAACAAGGTTGCCGTAAATACTATTATTCAAGACGAGAAGGAATTTCTGAACCATGTTGTAAAAGCGACTAACATGAAGTGCCTGACTCCACCATCGGCACTGGAAGGAGAGTGTGGAGTCCTCGCTGCTAATTTGTATGCGAAGAGTGTTTTTGGGGAGGATGCTTTGGTGAATGTGAGTGTTGAGAAACAAGCAGATGGTAAGCTAAGTGGATACATCAGAATCAGAAGCAAGACTCAAGGCATTGCCCTCAGTCTTGGGGACAAAATCACCTTGAAACAGAAAGGCGGCCCTTGA

Protein Analysis

1030

Amino Acids

114.36

Weight (kDa)

5.55

Isoelectric Point (pI)

47.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Adaptin_N PF01602 100 - 602 6.3e-92 Adaptin N terminal region
Coatamer_beta_C PF07718 749 - 887 5.7e-56 Coatomer beta C-terminal region
Coatomer_b_Cpla PF14806 894 - 1021 3.2e-56 Coatomer beta subunit appendage platform
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 980
AasI GACNNNNNNGTC 1 cut(s) 446
AatII GACGTC 1 cut(s) 333
AccB1I GGYRCC 2 cut(s) 281, 1054
AccI GTMKAC 2 cut(s) 2158, 2655
AccII CGCG 6 cut(s) 101, 579, 752, 836, 1280, 1391
AccIII TCCGGA 1 cut(s) 2578
AcoI YGGCCR 1 cut(s) 2523
AcsI RAATTY 2 cut(s) 2506, 2834
AcuI CTGAAG 5 cut(s) 374, 1455, 2378, 2448, 2486
AcyI GRCGYC 2 cut(s) 330, 779
AfaI GTAC 4 cut(s) 572, 716, 968, 1591
AfeI AGCGCT 1 cut(s) 1476
AfiI CCNNNNNNNGG 6 cut(s) 224, 241, 358, 436, 691, 717
AflII CTTAAG 1 cut(s) 1157
AflIII ACRYGT 1 cut(s) 1389
AjiI CACGTC 1 cut(s) 1483
AjnI CCWGG 3 cut(s) 261, 696, 1580
AjuI GAANNNNNNNTTGG 4 cut(s) 206, 238, 2498, 2530
AleI CACNNNNGTG 1 cut(s) 1427
Alw21I GWGCWC 4 cut(s) 666, 1206, 1424, 1757
Alw26I GTCTC 5 cut(s) 728, 1907, 2026, 2620, 2654
Ama87I CYCGRG 3 cut(s) 473, 1750, 1894
Aor13HI TCCGGA 1 cut(s) 2578
Aor51HI AGCGCT 1 cut(s) 1476
AoxI GGCC 6 cut(s) 63, 360, 1772, 2223, 2523, 3082
ApeKI GCWGC 9 cut(s) 721, 1073, 1076, 1525, 1549, 1814, 2029, 2191, 2918
ApoI RAATTY 2 cut(s) 2506, 2834
ArsI GACNNNNNNTTYG 2 cut(s) 492, 524
Asp700I GAANNNNTTC 2 cut(s) 1962, 2499
AspLEI GCGC 7 cut(s) 103, 684, 752, 754, 836, 838, 1477
AsuC2I CCSGG 1 cut(s) 2198
AsuHPI GGTGA 7 cut(s) 400, 965, 1625, 2135, 2546, 2974, 3055
AvaI CYCGRG 3 cut(s) 473, 1750, 1894
AvaII GGWCC 7 cut(s) 265, 439, 508, 694, 790, 1794, 2317
AxyI CCTNAGG 1 cut(s) 1410
BaeGI GKGCMC 2 cut(s) 284, 1213
BalI TGGCCA 1 cut(s) 2525
BamHI GGATCC 1 cut(s) 199
BanI GGYRCC 2 cut(s) 281, 1054
BbsI GAAGAC 3 cut(s) 1250, 1331, 1755
Bbv12I GWGCWC 4 cut(s) 666, 1206, 1424, 1757
BbvI GCAGC 9 cut(s) 708, 1063, 1085, 1512, 1536, 1801, 2016, 2203, 2905
BceAI ACGGC 2 cut(s) 995, 2789
BcgI CGANNNNNNTGC 4 cut(s) 658, 692, 2094, 2128
BciT130I CCWGG 3 cut(s) 263, 698, 1582
BciVI GTATCC 2 cut(s) 1549, 2999
BclI TGATCA 1 cut(s) 2013
BcnI CCSGG 1 cut(s) 2198
BcoDI GTCTC 5 cut(s) 728, 1907, 2026, 2620, 2654
BfaI CTAG 4 cut(s) 1005, 1767, 2147, 2573
BfmI CTRYAG 1 cut(s) 937
BfoI RGCGCY 1 cut(s) 1478
BfrI CTTAAG 1 cut(s) 1157
BfuI GTATCC 2 cut(s) 1549, 2999
BglII AGATCT 1 cut(s) 152
Bme1390I CCNGG 4 cut(s) 263, 698, 1582, 2198
Bme18I GGWCC 7 cut(s) 265, 439, 508, 694, 790, 1794, 2317
BmeT110I CYCGRG 3 cut(s) 473, 1750, 1894
BmgBI CACGTC 1 cut(s) 1483
BmiI GGNNCC 7 cut(s) 201, 283, 596, 792, 1033, 1056, 1795
BmrFI CCNGG 4 cut(s) 263, 698, 1582, 2198
BmrI ACTGGG 1 cut(s) 2045
BmsI GCATC 6 cut(s) 1441, 1711, 2109, 2359, 2750, 2944
BmuI ACTGGG 1 cut(s) 2045
BpiI GAAGAC 3 cut(s) 1250, 1331, 1755
BplI GAGNNNNNCTC 4 cut(s) 573, 605, 1231, 1263
BpmI CTGGAG 2 cut(s) 539, 2364
Bpu10I CCTNAGC 2 cut(s) 1205, 2220
BpuEI CTTGAG 8 cut(s) 1364, 1897, 1931, 2064, 2258, 2321, 2699, 3015
BpuMI CCSGG 1 cut(s) 2198
Bsa29I ATCGAT 1 cut(s) 873
BsaAI YACGTR 1 cut(s) 1086
BsaBI GATNNNNATC 2 cut(s) 177, 527
BsaHI GRCGYC 2 cut(s) 330, 779
BsaI GGTCTC 2 cut(s) 2026, 2620
BsaJI CCNNGG 4 cut(s) 435, 577, 1050, 1581
BsaWI WCCGGW 2 cut(s) 591, 2578
BsaXI ACNNNNNCTCC 2 cut(s) 2560, 2590
Bsc4I CCNNNNNNNGG 6 cut(s) 224, 241, 358, 436, 691, 717
Bse118I RCCGGY 1 cut(s) 717
Bse1I ACTGG 5 cut(s) 556, 1824, 2040, 2347, 2898
Bse21I CCTNAGG 1 cut(s) 1410
Bse3DI GCAATG 3 cut(s) 185, 2775, 3036
Bse8I GATNNNNATC 2 cut(s) 177, 527
BseAI TCCGGA 1 cut(s) 2578
BseBI CCWGG 3 cut(s) 263, 698, 1582
BseCI ATCGAT 1 cut(s) 873
BseDI CCNNGG 4 cut(s) 435, 577, 1050, 1581
BseJI GATNNNNATC 2 cut(s) 177, 527
BseLI CCNNNNNNNGG 6 cut(s) 224, 241, 358, 436, 691, 717
BseMI GCAATG 3 cut(s) 185, 2775, 3036
BseMII CTCAG 8 cut(s) 1219, 1343, 1401, 1692, 1751, 2061, 2769, 3058
BseNI ACTGG 5 cut(s) 556, 1824, 2040, 2347, 2898
BsePI GCGCGC 2 cut(s) 750, 834
BseRI GAGGAG 6 cut(s) 147, 362, 365, 449, 452, 455
BseSI GKGCMC 2 cut(s) 284, 1213
BseXI GCAGC 9 cut(s) 708, 1063, 1085, 1512, 1536, 1801, 2016, 2203, 2905
BseYI CCCAGC 1 cut(s) 727
BsgI GTGCAG 3 cut(s) 238, 1800, 1821
Bsh1236I CGCG 6 cut(s) 101, 579, 752, 836, 1280, 1391
BshFI GGCC 6 cut(s) 65, 362, 1774, 2225, 2525, 3084
BshNI GGYRCC 2 cut(s) 281, 1054
BshVI ATCGAT 1 cut(s) 873
BsiHKAI GWGCWC 4 cut(s) 666, 1206, 1424, 1757
BsiHKCI CYCGRG 3 cut(s) 473, 1750, 1894
BsiSI CCGG 8 cut(s) 515, 592, 685, 718, 755, 1029, 2197, 2579
BslFI GGGAC 3 cut(s) 544, 1807, 3068
BslI CCNNNNNNNGG 6 cut(s) 224, 241, 358, 436, 691, 717
BsmAI GTCTC 5 cut(s) 728, 1907, 2026, 2620, 2654
BsmBI CGTCTC 1 cut(s) 728
BsmFI GGGAC 3 cut(s) 544, 1807, 3068
BsmI GAATGC 3 cut(s) 694, 2242, 2388
BsnI GGCC 6 cut(s) 65, 362, 1774, 2225, 2525, 3084
Bso31I GGTCTC 2 cut(s) 2026, 2620
BsoBI CYCGRG 3 cut(s) 473, 1750, 1894
Bsp1286I GDGCHC 6 cut(s) 284, 666, 1206, 1213, 1424, 1757
Bsp13I TCCGGA 1 cut(s) 2578
BspANI GGCC 6 cut(s) 65, 362, 1774, 2225, 2525, 3084
BspCNI CTCAG 8 cut(s) 1218, 1342, 1402, 1693, 1750, 2060, 2770, 3057
BspDI ATCGAT 1 cut(s) 873
BspEI TCCGGA 1 cut(s) 2578
BspFNI CGCG 6 cut(s) 101, 579, 752, 836, 1280, 1391
BspLI GGNNCC 7 cut(s) 201, 283, 596, 792, 1033, 1056, 1795
BspT107I GGYRCC 2 cut(s) 281, 1054
BspTI CTTAAG 1 cut(s) 1157
BspTNI GGTCTC 2 cut(s) 2026, 2620
BsrDI GCAATG 3 cut(s) 185, 2775, 3036
BsrFI RCCGGY 1 cut(s) 717
BsrI ACTGG 5 cut(s) 556, 1824, 2040, 2347, 2898
BssAI RCCGGY 1 cut(s) 717
BssECI CCNNGG 4 cut(s) 435, 577, 1050, 1581
BssHII GCGCGC 2 cut(s) 750, 834
BssNAI GTATAC 1 cut(s) 2656
BssNI GRCGYC 2 cut(s) 330, 779
Bst1107I GTATAC 1 cut(s) 2656
Bst2UI CCWGG 3 cut(s) 263, 698, 1582
Bst6I CTCTTC 4 cut(s) 407, 1953, 2623, 2930
BstACI GRCGYC 2 cut(s) 330, 779
BstAFI CTTAAG 1 cut(s) 1157
BstAPI GCANNNNNTGC 3 cut(s) 1061, 1721, 2747
BstBAI YACGTR 1 cut(s) 1086
BstC8I GCNNGC 8 cut(s) 752, 836, 1154, 1380, 1420, 1927, 2181, 2297
BstDSI CCRYGG 1 cut(s) 577
BstENI CCTNNNNNAGG 1 cut(s) 356
BstFNI CGCG 6 cut(s) 101, 579, 752, 836, 1280, 1391
BstH2I RGCGCY 1 cut(s) 1478
BstHHI GCGC 7 cut(s) 103, 684, 752, 754, 836, 838, 1477
BstMAI GTCTC 5 cut(s) 728, 1907, 2026, 2620, 2654
BstNI CCWGG 3 cut(s) 263, 698, 1582
BstSCI CCNGG 4 cut(s) 261, 696, 1580, 2196
BstSFI CTRYAG 1 cut(s) 937
BstSLI GKGCMC 2 cut(s) 284, 1213
BstSNI TACGTA 1 cut(s) 1086
BstUI CGCG 6 cut(s) 101, 579, 752, 836, 1280, 1391
BstV1I GCAGC 9 cut(s) 708, 1063, 1085, 1512, 1536, 1801, 2016, 2203, 2905
BstV2I GAAGAC 3 cut(s) 1250, 1331, 1755
BstX2I RGATCY 7 cut(s) 152, 178, 199, 209, 227, 1569, 1853
BstXI CCANNNNNNTGG 1 cut(s) 14
BstYI RGATCY 7 cut(s) 152, 178, 199, 209, 227, 1569, 1853
BstZ17I GTATAC 1 cut(s) 2656
Bsu15I ATCGAT 1 cut(s) 873
Bsu36I CCTNAGG 1 cut(s) 1410
BsuI GTATCC 2 cut(s) 1549, 2999
BsuRI GGCC 6 cut(s) 65, 362, 1774, 2225, 2525, 3084
BsuTUI ATCGAT 1 cut(s) 873
BtgI CCRYGG 1 cut(s) 577
BtrI CACGTC 1 cut(s) 1483
BtsI GCAGTG 2 cut(s) 1673, 1692
BtsIMutI CAGTG 6 cut(s) 1211, 1673, 1692, 1817, 2416, 2891
Cac8I GCNNGC 8 cut(s) 752, 836, 1154, 1380, 1420, 1927, 2181, 2297
CfoI GCGC 7 cut(s) 103, 684, 752, 754, 836, 838, 1477
Cfr10I RCCGGY 1 cut(s) 717
Cfr42I CCGCGG 1 cut(s) 580
ClaI ATCGAT 1 cut(s) 873
CseI GACGC 2 cut(s) 768, 2543
Csp6I GTAC 4 cut(s) 571, 715, 967, 1590
CviAII CATG 9 cut(s) 367, 706, 1595, 2017, 2154, 2290, 2745, 2846, 2866
CviQI GTAC 4 cut(s) 571, 715, 967, 1590
DrdI GACNNNNNNGTC 1 cut(s) 446
DseDI GACNNNNNNGTC 1 cut(s) 446
EaeI YGGCCR 1 cut(s) 2523
Eam1104I CTCTTC 4 cut(s) 407, 1953, 2623, 2930
EarI CTCTTC 4 cut(s) 407, 1953, 2623, 2930
EciI GGCGGA 1 cut(s) 192
Eco105I TACGTA 1 cut(s) 1086
Eco147I AGGCCT 1 cut(s) 1774
Eco31I GGTCTC 2 cut(s) 2026, 2620
Eco47I GGWCC 7 cut(s) 265, 439, 508, 694, 790, 1794, 2317
Eco47III AGCGCT 1 cut(s) 1476
Eco57I CTGAAG 5 cut(s) 374, 1455, 2378, 2448, 2486
Eco81I CCTNAGG 1 cut(s) 1410
Eco88I CYCGRG 3 cut(s) 473, 1750, 1894
EcoNI CCTNNNNNAGG 1 cut(s) 356
EcoO109I RGGNCCY 3 cut(s) 508, 790, 1794
EcoRII CCWGG 3 cut(s) 261, 696, 1580
Esp3I CGTCTC 1 cut(s) 728
FaeI CATG 9 cut(s) 370, 709, 1598, 2020, 2157, 2293, 2748, 2849, 2869
FaqI GGGAC 3 cut(s) 544, 1807, 3068
FatI CATG 9 cut(s) 366, 705, 1594, 2016, 2153, 2289, 2744, 2845, 2865
FauI CCCGC 2 cut(s) 295, 1285
FauNDI CATATG 1 cut(s) 2434
FbaI TGATCA 1 cut(s) 2013
FblI GTMKAC 2 cut(s) 2158, 2655
FspBI CTAG 4 cut(s) 1005, 1767, 2147, 2573
GlaI GCGC 7 cut(s) 102, 683, 751, 753, 835, 837, 1476
GsaI CCCAGC 1 cut(s) 731
GsuI CTGGAG 2 cut(s) 539, 2364
HaeII RGCGCY 1 cut(s) 1478
HaeIII GGCC 6 cut(s) 65, 362, 1774, 2225, 2525, 3084
HapII CCGG 8 cut(s) 515, 592, 685, 718, 755, 1029, 2197, 2579
HgaI GACGC 2 cut(s) 768, 2543
HhaI GCGC 7 cut(s) 103, 684, 752, 754, 836, 838, 1477
Hin1I GRCGYC 2 cut(s) 330, 779
Hin1II CATG 9 cut(s) 370, 709, 1598, 2020, 2157, 2293, 2748, 2849, 2869
Hin6I GCGC 7 cut(s) 101, 682, 750, 752, 834, 836, 1475
HinP1I GCGC 7 cut(s) 101, 682, 750, 752, 834, 836, 1475
HindIII AAGCTT 1 cut(s) 1940
HpaII CCGG 8 cut(s) 515, 592, 685, 718, 755, 1029, 2197, 2579
HphI GGTGA 7 cut(s) 400, 965, 1625, 2135, 2546, 2974, 3055
Hpy166II GTNNAC 8 cut(s) 115, 268, 715, 1590, 1987, 2159, 2352, 2656
Hpy188III TCNNGA 9 cut(s) 451, 475, 1250, 1409, 2081, 2275, 2465, 2579, 2822
Hpy8I GTNNAC 8 cut(s) 115, 268, 715, 1590, 1987, 2159, 2352, 2656
Hpy99I CGWCG 4 cut(s) 332, 335, 784, 799
HpyCH4IV ACGT 6 cut(s) 330, 423, 737, 1085, 1482, 2335
HpySE526I ACGT 6 cut(s) 330, 423, 737, 1085, 1482, 2335
Hsp92I GRCGYC 2 cut(s) 330, 779
Hsp92II CATG 9 cut(s) 370, 709, 1598, 2020, 2157, 2293, 2748, 2849, 2869
HspAI GCGC 7 cut(s) 101, 682, 750, 752, 834, 836, 1475
Kpn2I TCCGGA 1 cut(s) 2578
Ksp22I TGATCA 1 cut(s) 2013
KspI CCGCGG 1 cut(s) 580
LmnI GCTCC 8 cut(s) 375, 462, 594, 661, 784, 1678, 2199, 2581
Lsp1109I GCAGC 9 cut(s) 708, 1063, 1085, 1512, 1536, 1801, 2016, 2203, 2905
LweI GCATC 6 cut(s) 1441, 1711, 2109, 2359, 2750, 2944
MaeI CTAG 4 cut(s) 1005, 1767, 2147, 2573
MaeII ACGT 6 cut(s) 330, 423, 737, 1085, 1482, 2335
MaeIII GTNAC 4 cut(s) 583, 900, 2437, 2470
MflI RGATCY 7 cut(s) 152, 178, 199, 209, 227, 1569, 1853
MhlI GDGCHC 6 cut(s) 284, 666, 1206, 1213, 1424, 1757
MlsI TGGCCA 1 cut(s) 2525
MluI ACGCGT 1 cut(s) 1389
MluNI TGGCCA 1 cut(s) 2525
MmeI TCCRAC 6 cut(s) 31, 96, 206, 762, 897, 2286
Mox20I TGGCCA 1 cut(s) 2525
MroI TCCGGA 1 cut(s) 2578
MroXI GAANNNNTTC 2 cut(s) 1962, 2499
MscI TGGCCA 1 cut(s) 2525
MslI CAYNNNNRTG 3 cut(s) 710, 1427, 2121
Msp20I TGGCCA 1 cut(s) 2525
MspA1I CMGCKG 4 cut(s) 579, 634, 727, 1076
MspCI CTTAAG 1 cut(s) 1157
MspI CCGG 8 cut(s) 515, 592, 685, 718, 755, 1029, 2197, 2579
MspR9I CCNGG 4 cut(s) 263, 698, 1582, 2198
Mva1269I GAATGC 3 cut(s) 694, 2242, 2388
MvaI CCWGG 3 cut(s) 263, 698, 1582
MvnI CGCG 6 cut(s) 101, 579, 752, 836, 1280, 1391
NciI CCSGG 1 cut(s) 2198
NdeI CATATG 1 cut(s) 2434
NlaIII CATG 9 cut(s) 370, 709, 1598, 2020, 2157, 2293, 2748, 2849, 2869
NlaIV GGNNCC 7 cut(s) 201, 283, 596, 792, 1033, 1056, 1795
NmeAIII GCCGAG 2 cut(s) 231, 1031
NmuCI GTSAC 1 cut(s) 583
OliI CACNNNNGTG 1 cut(s) 1427
PaeR7I CTCGAG 2 cut(s) 473, 1750
PauI GCGCGC 2 cut(s) 750, 834
PceI AGGCCT 1 cut(s) 1774
PcsI WCGNNNNNNNCGW 4 cut(s) 203, 324, 480, 489
PctI GAATGC 3 cut(s) 694, 2242, 2388
PdmI GAANNNNTTC 2 cut(s) 1962, 2499
PfeI GAWTC 8 cut(s) 173, 523, 646, 1457, 1963, 2406, 2582, 3015
PfoI TCCNGGA 1 cut(s) 2196
Ppu21I YACGTR 1 cut(s) 1086
PpuMI RGGWCCY 3 cut(s) 508, 790, 1794
PsiI TTATAA 1 cut(s) 980
Psp5II RGGWCCY 3 cut(s) 508, 790, 1794
Psp6I CCWGG 3 cut(s) 261, 696, 1580
PspFI CCCAGC 1 cut(s) 727
PspGI CCWGG 3 cut(s) 261, 696, 1580
PspN4I GGNNCC 7 cut(s) 201, 283, 596, 792, 1033, 1056, 1795
PspPPI RGGWCCY 3 cut(s) 508, 790, 1794
PspXI VCTCGAGB 1 cut(s) 1750
PsuI RGATCY 7 cut(s) 152, 178, 199, 209, 227, 1569, 1853
PteI GCGCGC 2 cut(s) 750, 834
PvuII CAGCTG 1 cut(s) 1076
RsaI GTAC 4 cut(s) 572, 716, 968, 1591
RsaNI GTAC 4 cut(s) 571, 715, 967, 1590
RseI CAYNNNNRTG 3 cut(s) 710, 1427, 2121
SacII CCGCGG 1 cut(s) 580
ScrFI CCNGG 4 cut(s) 263, 698, 1582, 2198
SduI GDGCHC 6 cut(s) 284, 666, 1206, 1213, 1424, 1757
SfaNI GCATC 6 cut(s) 1441, 1711, 2109, 2359, 2750, 2944
SfcI CTRYAG 1 cut(s) 937
Sfr274I CTCGAG 2 cut(s) 473, 1750
Sfr303I CCGCGG 1 cut(s) 580
SgrBI CCGCGG 1 cut(s) 580
SinI GGWCC 7 cut(s) 265, 439, 508, 694, 790, 1794, 2317
SlaI CTCGAG 2 cut(s) 473, 1750
SmiMI CAYNNNNRTG 3 cut(s) 710, 1427, 2121
SnaBI TACGTA 1 cut(s) 1086
SseBI AGGCCT 1 cut(s) 1774
SspMI CTAG 4 cut(s) 1005, 1767, 2147, 2573
StuI AGGCCT 1 cut(s) 1774
StyD4I CCNGG 4 cut(s) 261, 696, 1580, 2196
TaiI ACGT 6 cut(s) 333, 426, 740, 1088, 1485, 2338
TaqII GACCGA 1 cut(s) 506
TatI WGTACW 3 cut(s) 570, 966, 1589
TauI GCSGC 3 cut(s) 634, 727, 3084
TfiI GAWTC 8 cut(s) 173, 523, 646, 1457, 1963, 2406, 2582, 3015
TscAI CASTG 6 cut(s) 1218, 1673, 1699, 1824, 2416, 2898
TseFI GTSAC 1 cut(s) 583
TseI GCWGC 9 cut(s) 721, 1073, 1076, 1525, 1549, 1814, 2029, 2191, 2918
Tsp45I GTSAC 1 cut(s) 583
TspDTI ATGAA 2 cut(s) 394, 2882
TspGWI ACGGA 1 cut(s) 700
TspRI CASTG 6 cut(s) 1218, 1673, 1699, 1824, 2416, 2898
Vha464I CTTAAG 1 cut(s) 1157
VpaK11BI GGWCC 7 cut(s) 265, 439, 508, 694, 790, 1794, 2317
XagI CCTNNNNNAGG 1 cut(s) 356
XapI RAATTY 2 cut(s) 2506, 2834
XhoI CTCGAG 2 cut(s) 473, 1750
XmiI GTMKAC 2 cut(s) 2158, 2655
XmnI GAANNNNTTC 2 cut(s) 1962, 2499
XspI CTAG 4 cut(s) 1005, 1767, 2147, 2573
ZraI GACGTC 1 cut(s) 331
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.