Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr9

Orthogroup ID

OG0000969

Physical Location & Seq

Genomic Coordinates Reverse (-)

5939697 .. 5941660

Gene Structure 1964 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom09g07780.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1662 bp

ATGTCCGTGTACCGCCTGCCGCAGGGGGAGACGTTGCTGGACAGCGCGCGGGAGATCATAGATCGGTTCTTGGCATCGGAGCAGGACCCTTCGAGTAAGCGAAATGCTTTCCTTATGCTTTTTAATTGCGCGCAGGATAGGGCTGTGAATTACTTGTTTAAGCATATCGATAGGATTATTGATTGGGGGGAACAGTTACAGATGGTTGTGTTGGAATTGATTAAGAAGGTCTGTAGGGTTAATAAAGGTGAGAAAGGGAAGTACATTAAGGTTATTATATCATTGCTTAATGCCCCGTCGAGTGCGGTTGTTTATGAGTGTGCCGGAACCCTTGTGTCATTGTCCTCGGCACCTACTGCAATTCGGGCAGCTGCCAACACGTACTGTCAGTTGTTGTTGTCTCAGAGTGATAACAATGTGAAGTTGATTGTGCTGGATAGGATTAGTGAGCTTAAGGCATCACACAGGGAGATTGTGGTTGAGTTGGTTATGGATGTGCTCAGGGCATTGTCGAGTCCGAATGTTGATATTAGGAGGAAGACTCTTGACATTGTGCTTGATTTGATTACTCCTGCGAATGTTGATGAGGTTGTGATGATGTTGAAGAAGGAGGTTGTGAAGACTCAGAGCGGGGAACATGAGAAGAATGGGGAGTATAGGCAGATGTTGGTGCAAGCAATATACGCATGTGCTGTTAAGTTTCCTGAGGTGGCTAGCACAGTGGTGCACCCCTTGATGGATTTCTTGGGCGATTCGAATGTGGCTTCAGCCCTGGACGTGGCTGTTTTTGTGCGTGAGATCATTGAAACCAACCCCAAGCTGCGTGTTTCTATAATAATGAGGCTGCTGGATACTTTCTACCAGATCCGCAATTCCAGGGTGTGTACTCATGCTCTATGGATTATCGGCGAGTATGCTCACTCGCTTTCTGAAGTTGAGAGTGGGATTGCAACCATTAAGCAGTGTCTTGGGGAGCTTCCATTCTACACTGCTTCCGAGGAAAAGGAGGCACAAGATGCTTCAAAGAACTCTCAGGTGGTAAGCTCGAGCACTGTGTCTTCTAGGAGGCCTGTGGTCCTTGCAGACGGGACCTATGCCACCCAGTCTGCTGCTCTGGAAACTGCGATGTCTGCACCTGTCCTTGTTCAAGGATCTCTGACTTCTGTGGGGAACTTGAGGTCATTGGTTCTCTCGGGTGATTTTTTCCTTGAGTCAGTTGTGGCTTGCACATTAACGAAGCTTGTTTTGAGATTGGAAGAGGTTCAGCCTTCAAAGGTTGAAGTGAACAAGGCAACCACACAAGCATTGTCGATCATGGTCTCTATGCTGCAACTGGGACAATCCTCAGTCCTTCCACATCCGATTGATAATGATTCTCAAGATAGAATTGTTCTTTGCATCCGATTACTATGCCATAAAGGTGAAGGATTAAGGAAGATATGGCTGGAGTCATGTAGACAAAGCTTTGTGAAAATGCTTGCAGATAAGCAGCTCCGGGAAACAGAAGAAAGTAAAGCTAAGGCCCAGATATTGAATGCACAACCTGATGACCTTATTGATTTCTACCATCTCAAGAGCAGAAAGGGCATGAGCCAGCTTGAGTTGGAAGATGAGGTCCAAGATCGATCTCAAACGTGCTACTGGAGGGTTCACAAAGGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005798 GO:0005829 GO:0005911 GO:0006810 GO:0006888 GO:0006890 GO:0006891 GO:0008150 GO:0009506 GO:0012505 GO:0012506 GO:0016020 GO:0016192 GO:0030054 GO:0030117 GO:0030120 GO:0030126 GO:0030135 GO:0030137 GO:0030659 GO:0030660 GO:0030662 GO:0030663 GO:0031090 GO:0031410 GO:0031982 GO:0032991 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044431 GO:0044433 GO:0044444 GO:0044446 GO:0044464 GO:0046907 GO:0048193 GO:0048475 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0055044 GO:0097708 GO:0098588 GO:0098796 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Adaptin_N Coatamer_beta_C Coatomer_b_Cpla

Protein Analysis

554

Amino Acids

61.66

Weight (kDa)

6.26

Isoelectric Point (pI)

49.81

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Adaptin_N	PF01602	14 - 368	2.7e-58	Adaptin N terminal region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000969)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G31480 AT4G31480 AT4G31480 AT4G31480 AT4G31480 AT4G31480 AT4G31480 AT4G31480 AT4G31480 AT4G31490 AT4G31490 AT4G31490
fragaria_vesca	FvH4_4g12700 FvH4_4g12700 FvH4_4g12700 FvH4_6g37230 FvH4_6g37230 FvH4_6g37230
malus_domestica	MD04G1023700.v1.1 MD09G1159400.v1.1 MD13G1280100.v1.1 MD17G1145600.v1.1
prunus_persica	Prupe.3G018300_v2.0.a1 Prupe.3G018400_v2.0.a1
pyrus_communis	pycom04g02030 pycom09g07780 pycom09g18330 pycom13g29300 pycom15g32330 pycom15g32340 pycom17g13850
rosa_chinensis	RchiOBHm_Chr2g0149941 RchiOBHm_Chr2g0149961 RchiOBHm_Chr2g0149991 RchiOBHm_Chr4g0411591
rosa_laevigata	RLG00000008343 RLG00000020457 RLG00000020458
rosa_multiflora	Rmu_sc0001899.1_g000002 Rmu_sc0006550.1_g000008
rosa_roxburghii	Rroxscaffold_2G00097530 Rroxscaffold_2G00097540 Rroxscaffold_5G00356170
rosa_rugosa	Rorug02G0417300 Rorug04G0107800
rosa_samantha	Rh2AG476800 Rh2AG476900 Rh2AG477100 Rh2BG488500 Rh2BG488600 Rh2CG462500 Rh2CG462600 Rh2CG462800 Rh2DG497600 Rh2DG497700 Rh4AG169200 Rh4BG166100 Rh4CG180900 Rh4DG163500
rosa_wichuraiana	Rw2G038870 Rw2G038880 Rw2G038900 Rw4G014060

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	349
AccBSI	CCGCTC	1 cut(s)	630
AccI	GTMKAC	1 cut(s)	1456
AccII	CGCG	3 cut(s)	47, 49, 131
AciI	CCGC	6 cut(s)	13, 20, 49, 305, 630, 868
AclWI	GGATC	2 cut(s)	859, 1159
AcuI	CTGAAG	2 cut(s)	750, 951
AfaI	GTAC	4 cut(s)	11, 263, 383, 886
AfiI	CCNNNNNNNGG	3 cut(s)	22, 736, 778
AflII	CTTAAG	1 cut(s)	452
AflIII	ACRYGT	1 cut(s)	378
AgsI	TTSAA	7 cut(s)	604, 806, 1023, 1148, 1272, 1280, 1534
AjiI	CACGTC	1 cut(s)	778
AjnI	CCWGG	2 cut(s)	771, 875
AleI	CACNNNNGTG	1 cut(s)	722
Alw21I	GWGCWC	3 cut(s)	501, 729, 1052
Alw26I	GTCTC	3 cut(s)	23, 405, 1324
Alw44I	GTGCAC	1 cut(s)	725
AlwI	GGATC	2 cut(s)	859, 1159
Ama87I	CYCGRG	2 cut(s)	1045, 1192
AoxI	GGCC	2 cut(s)	1067, 1521
ApaLI	GTGCAC	1 cut(s)	725
ApeKI	GCWGC	7 cut(s)	368, 371, 820, 844, 1109, 1327, 1489
Asp700I	GAANNNNTTC	1 cut(s)	1260
AspLEI	GCGC	4 cut(s)	47, 49, 131, 133
AspS9I	GGNCC	5 cut(s)	85, 1075, 1089, 1522, 1615
AsuC2I	CCSGG	1 cut(s)	1496
AsuHPI	GGTGA	3 cut(s)	260, 1208, 1433
AsuII	TTCGAA	1 cut(s)	755
AsuNHI	GCTAGC	1 cut(s)	713
AvaI	CYCGRG	2 cut(s)	1045, 1192
AvaII	GGWCC	4 cut(s)	85, 1075, 1089, 1615
AxyI	CCTNAGG	1 cut(s)	705
BaeGI	GKGCMC	1 cut(s)	729
BanI	GGYRCC	1 cut(s)	349
BbsI	GAAGAC	3 cut(s)	545, 626, 1050
Bbv12I	GWGCWC	3 cut(s)	501, 729, 1052
BbvI	GCAGC	7 cut(s)	358, 380, 807, 831, 1096, 1314, 1501
BccI	CCATC	3 cut(s)	196, 730, 1575
BcgI	CGANNNNNNTGC	2 cut(s)	1392, 1426
BciT130I	CCWGG	2 cut(s)	773, 877
BciVI	GTATCC	1 cut(s)	844
BcnI	CCSGG	1 cut(s)	1496
BcoDI	GTCTC	3 cut(s)	23, 405, 1324
BfaI	CTAG	2 cut(s)	714, 1062
BfmI	CTRYAG	1 cut(s)	232
BfrI	CTTAAG	1 cut(s)	452
BfuI	GTATCC	1 cut(s)	844
BisI	GCNGC	8 cut(s)	20, 369, 372, 821, 845, 1110, 1328, 1490
BlsI	GCNGC	8 cut(s)	21, 370, 373, 822, 846, 1111, 1329, 1491
Bme1390I	CCNGG	3 cut(s)	773, 877, 1496
Bme18I	GGWCC	4 cut(s)	85, 1075, 1089, 1615
BmeT110I	CYCGRG	2 cut(s)	1045, 1192
BmgBI	CACGTC	1 cut(s)	778
BmgT120I	GGNCC	5 cut(s)	85, 1075, 1089, 1522, 1615
BmiI	GGNNCC	4 cut(s)	87, 328, 351, 1090
BmrFI	CCNGG	3 cut(s)	773, 877, 1496
BmrI	ACTGGG	2 cut(s)	1096, 1343
BmsI	GCATC	4 cut(s)	83, 467, 1006, 1407
BmtI	GCTAGC	1 cut(s)	717
BmuI	ACTGGG	2 cut(s)	1096, 1343
BpiI	GAAGAC	3 cut(s)	545, 626, 1050
BplI	GAGNNNNNCTC	2 cut(s)	526, 558
BpmI	CTGGAG	1 cut(s)	1466
Bpu10I	CCTNAGC	2 cut(s)	500, 1518
Bpu14I	TTCGAA	1 cut(s)	755
BpuEI	CTTGAG	5 cut(s)	1195, 1229, 1362, 1556, 1619
BpuMI	CCSGG	1 cut(s)	1496
Bsa29I	ATCGAT	2 cut(s)	168, 1624
BsaAI	YACGTR	1 cut(s)	381
BsaI	GGTCTC	1 cut(s)	1324
BsaJI	CCNNGG	4 cut(s)	345, 771, 876, 996
Bsc4I	CCNNNNNNNGG	3 cut(s)	22, 736, 778
Bse1I	ACTGG	3 cut(s)	1102, 1338, 1646
Bse21I	CCTNAGG	1 cut(s)	705
Bse3DI	GCAATG	1 cut(s)	281
BseBI	CCWGG	2 cut(s)	773, 877
BseCI	ATCGAT	2 cut(s)	168, 1624
BseDI	CCNNGG	4 cut(s)	345, 771, 876, 996
BseGI	GGATG	3 cut(s)	499, 1357, 1398
BseLI	CCNNNNNNNGG	3 cut(s)	22, 736, 778
BseMI	GCAATG	1 cut(s)	281
BseMII	CTCAG	6 cut(s)	416, 514, 638, 696, 1046, 1359
BseNI	ACTGG	3 cut(s)	1102, 1338, 1646
BsePI	GCGCGC	2 cut(s)	45, 129
BseSI	GKGCMC	1 cut(s)	729
BseXI	GCAGC	7 cut(s)	358, 380, 807, 831, 1096, 1314, 1501
BsgI	GTGCAG	1 cut(s)	1116
Bsh1236I	CGCG	3 cut(s)	47, 49, 131
BshFI	GGCC	2 cut(s)	1069, 1523
BshNI	GGYRCC	1 cut(s)	349
BshVI	ATCGAT	2 cut(s)	168, 1624
BsiHKAI	GWGCWC	3 cut(s)	501, 729, 1052
BsiHKCI	CYCGRG	2 cut(s)	1045, 1192
BsiSI	CCGG	2 cut(s)	324, 1495
BslFI	GGGAC	2 cut(s)	1102, 1350
BslI	CCNNNNNNNGG	3 cut(s)	22, 736, 778
BsmAI	GTCTC	3 cut(s)	23, 405, 1324
BsmBI	CGTCTC	1 cut(s)	23
BsmFI	GGGAC	2 cut(s)	1102, 1350
BsmI	GAATGC	1 cut(s)	1540
BsnI	GGCC	2 cut(s)	1069, 1523
Bso31I	GGTCTC	1 cut(s)	1324
BsoBI	CYCGRG	2 cut(s)	1045, 1192
Bsp119I	TTCGAA	1 cut(s)	755
Bsp1286I	GDGCHC	3 cut(s)	501, 729, 1052
Bsp143I	GATC	8 cut(s)	54, 61, 798, 864, 1151, 1311, 1621, 1625
BspACI	CCGC	6 cut(s)	13, 20, 49, 305, 630, 868
BspANI	GGCC	2 cut(s)	1069, 1523
BspCNI	CTCAG	6 cut(s)	415, 513, 637, 697, 1045, 1358
BspDI	ATCGAT	2 cut(s)	168, 1624
BspFNI	CGCG	3 cut(s)	47, 49, 131
BspLI	GGNNCC	4 cut(s)	87, 328, 351, 1090
BspOI	GCTAGC	1 cut(s)	717
BspPI	GGATC	2 cut(s)	859, 1159
BspT104I	TTCGAA	1 cut(s)	755
BspT107I	GGYRCC	1 cut(s)	349
BspTI	CTTAAG	1 cut(s)	452
BspTNI	GGTCTC	1 cut(s)	1324
BsrBI	CCGCTC	1 cut(s)	630
BsrDI	GCAATG	1 cut(s)	281
BsrI	ACTGG	3 cut(s)	1102, 1338, 1646
BssECI	CCNNGG	4 cut(s)	345, 771, 876, 996
BssHII	GCGCGC	2 cut(s)	45, 129
BssMI	GATC	8 cut(s)	54, 61, 798, 864, 1151, 1311, 1621, 1625
Bst2UI	CCWGG	2 cut(s)	773, 877
Bst4CI	ACNGT	4 cut(s)	195, 386, 721, 1054
Bst6I	CTCTTC	1 cut(s)	1251
BstAFI	CTTAAG	1 cut(s)	452
BstAPI	GCANNNNNTGC	2 cut(s)	356, 1016
BstBAI	YACGTR	1 cut(s)	381
BstBI	TTCGAA	1 cut(s)	755
BstC8I	GCNNGC	8 cut(s)	17, 47, 131, 675, 715, 1225, 1479, 1595
BstDEI	CTNAG	7 cut(s)	402, 500, 624, 705, 1032, 1345, 1518
BstENI	CCTNNNNNAGG	1 cut(s)	20
BstF5I	GGATG	3 cut(s)	499, 1357, 1398
BstFNI	CGCG	3 cut(s)	47, 49, 131
BstHHI	GCGC	4 cut(s)	47, 49, 131, 133
BstKTI	GATC	8 cut(s)	57, 64, 801, 867, 1154, 1314, 1624, 1628
BstMAI	GTCTC	3 cut(s)	23, 405, 1324
BstMBI	GATC	8 cut(s)	54, 61, 798, 864, 1151, 1311, 1621, 1625
BstMWI	GCNNNNNNNGC	6 cut(s)	356, 365, 683, 1016, 1130, 1584
BstNI	CCWGG	2 cut(s)	773, 877
BstNSI	RCATGY	1 cut(s)	690
BstSCI	CCNGG	3 cut(s)	771, 875, 1494
BstSFI	CTRYAG	1 cut(s)	232
BstSLI	GKGCMC	1 cut(s)	729
BstUI	CGCG	3 cut(s)	47, 49, 131
BstV1I	GCAGC	7 cut(s)	358, 380, 807, 831, 1096, 1314, 1501
BstV2I	GAAGAC	3 cut(s)	545, 626, 1050
BstX2I	RGATCY	2 cut(s)	864, 1151
BstYI	RGATCY	2 cut(s)	864, 1151
Bsu15I	ATCGAT	2 cut(s)	168, 1624
Bsu36I	CCTNAGG	1 cut(s)	705
BsuI	GTATCC	1 cut(s)	844
BsuRI	GGCC	2 cut(s)	1069, 1523
BsuTUI	ATCGAT	2 cut(s)	168, 1624
BtgZI	GCGATG	1 cut(s)	1139
BtrI	CACGTC	1 cut(s)	778
BtsCI	GGATG	3 cut(s)	499, 1357, 1398
BtsI	GCAGTG	2 cut(s)	968, 987
BtsIMutI	CAGTG	4 cut(s)	726, 968, 987, 1050
Cac8I	GCNNGC	8 cut(s)	17, 47, 131, 675, 715, 1225, 1479, 1595
CfoI	GCGC	4 cut(s)	47, 49, 131, 133
Cfr13I	GGNCC	5 cut(s)	85, 1075, 1089, 1522, 1615
ClaI	ATCGAT	2 cut(s)	168, 1624
Csp6I	GTAC	4 cut(s)	10, 262, 382, 885
CviAII	CATG	6 cut(s)	638, 687, 890, 1315, 1452, 1588
CviQI	GTAC	4 cut(s)	10, 262, 382, 885
DdeI	CTNAG	7 cut(s)	402, 500, 624, 705, 1032, 1345, 1518
DpnI	GATC	8 cut(s)	56, 63, 800, 866, 1153, 1313, 1623, 1627
DpnII	GATC	8 cut(s)	54, 61, 798, 864, 1151, 1311, 1621, 1625
Eam1104I	CTCTTC	1 cut(s)	1251
EarI	CTCTTC	1 cut(s)	1251
Eco147I	AGGCCT	1 cut(s)	1069
Eco31I	GGTCTC	1 cut(s)	1324
Eco47I	GGWCC	4 cut(s)	85, 1075, 1089, 1615
Eco57I	CTGAAG	2 cut(s)	750, 951
Eco81I	CCTNAGG	1 cut(s)	705
Eco88I	CYCGRG	2 cut(s)	1045, 1192
EcoNI	CCTNNNNNAGG	1 cut(s)	20
EcoO109I	RGGNCCY	2 cut(s)	85, 1089
EcoRII	CCWGG	2 cut(s)	771, 875
Esp3I	CGTCTC	1 cut(s)	23
FaeI	CATG	6 cut(s)	641, 690, 893, 1318, 1455, 1591
FaqI	GGGAC	2 cut(s)	1102, 1350
FatI	CATG	6 cut(s)	637, 686, 889, 1314, 1451, 1587
FauI	CCCGC	2 cut(s)	42, 623
FblI	GTMKAC	1 cut(s)	1456
Fnu4HI	GCNGC	8 cut(s)	20, 369, 372, 821, 845, 1110, 1328, 1490
FokI	GGATG	3 cut(s)	506, 1344, 1385
Fsp4HI	GCNGC	8 cut(s)	20, 369, 372, 821, 845, 1110, 1328, 1490
FspBI	CTAG	2 cut(s)	714, 1062
GlaI	GCGC	4 cut(s)	46, 48, 130, 132
GluI	GCNGC	8 cut(s)	20, 369, 372, 821, 845, 1110, 1328, 1490
GsuI	CTGGAG	1 cut(s)	1466
HaeIII	GGCC	2 cut(s)	1069, 1523
HapII	CCGG	2 cut(s)	324, 1495
HhaI	GCGC	4 cut(s)	47, 49, 131, 133
Hin1II	CATG	6 cut(s)	641, 690, 893, 1318, 1455, 1591
Hin6I	GCGC	4 cut(s)	45, 47, 129, 131
HinP1I	GCGC	4 cut(s)	45, 47, 129, 131
HindIII	AAGCTT	2 cut(s)	1238, 1462
HinfI	GANTC	7 cut(s)	514, 541, 622, 752, 1211, 1373, 1448
HpaII	CCGG	2 cut(s)	324, 1495
HphI	GGTGA	3 cut(s)	260, 1208, 1433
Hpy166II	GTNNAC	6 cut(s)	10, 727, 885, 1285, 1457, 1651
Hpy188I	TCNGA	9 cut(s)	79, 405, 519, 627, 931, 997, 1158, 1362, 1403
Hpy188III	TCNNGA	5 cut(s)	545, 704, 1115, 1379, 1573
Hpy8I	GTNNAC	6 cut(s)	10, 727, 885, 1285, 1457, 1651
Hpy99I	CGWCG	1 cut(s)	301
HpyAV	CCTTC	6 cut(s)	99, 220, 601, 1278, 1361, 1418
HpyCH4III	ACNGT	4 cut(s)	195, 386, 721, 1054
HpyCH4IV	ACGT	4 cut(s)	32, 380, 777, 1634
HpyF10VI	GCNNNNNNNGC	6 cut(s)	356, 365, 683, 1016, 1130, 1584
HpyF3I	CTNAG	7 cut(s)	402, 500, 624, 705, 1032, 1345, 1518
HpySE526I	ACGT	4 cut(s)	32, 380, 777, 1634
Hsp92II	CATG	6 cut(s)	641, 690, 893, 1318, 1455, 1591
HspAI	GCGC	4 cut(s)	45, 47, 129, 131
Kzo9I	GATC	8 cut(s)	54, 61, 798, 864, 1151, 1311, 1621, 1625
LmnI	GCTCC	3 cut(s)	79, 973, 1497
Lsp1109I	GCAGC	7 cut(s)	358, 380, 807, 831, 1096, 1314, 1501
LweI	GCATC	4 cut(s)	83, 467, 1006, 1407
MaeI	CTAG	2 cut(s)	714, 1062
MaeII	ACGT	4 cut(s)	32, 380, 777, 1634
MaeIII	GTNAC	1 cut(s)	195
MalI	GATC	8 cut(s)	56, 63, 800, 866, 1153, 1313, 1623, 1627
MbiI	CCGCTC	1 cut(s)	630
MboI	GATC	8 cut(s)	54, 61, 798, 864, 1151, 1311, 1621, 1625
MboII	GAAGA	9 cut(s)	550, 616, 631, 655, 1050, 1268, 1447, 1517, 1619
MflI	RGATCY	2 cut(s)	864, 1151
MhlI	GDGCHC	3 cut(s)	501, 729, 1052
MluCI	AATT	6 cut(s)	124, 148, 215, 360, 871, 1386
MlyI	GAGTC	5 cut(s)	523, 535, 616, 1220, 1457
MmeI	TCCRAC	2 cut(s)	192, 1584
MroXI	GAANNNNTTC	1 cut(s)	1260
MslI	CAYNNNNRTG	2 cut(s)	722, 1419
MspA1I	CMGCKG	1 cut(s)	371
MspCI	CTTAAG	1 cut(s)	452
MspI	CCGG	2 cut(s)	324, 1495
MspR9I	CCNGG	3 cut(s)	773, 877, 1496
Mva1269I	GAATGC	1 cut(s)	1540
MvaI	CCWGG	2 cut(s)	773, 877
MvnI	CGCG	3 cut(s)	47, 49, 131
MwoI	GCNNNNNNNGC	6 cut(s)	356, 365, 683, 1016, 1130, 1584
NciI	CCSGG	1 cut(s)	1496
NdeII	GATC	8 cut(s)	54, 61, 798, 864, 1151, 1311, 1621, 1625
NheI	GCTAGC	1 cut(s)	713
NlaIII	CATG	6 cut(s)	641, 690, 893, 1318, 1455, 1591
NlaIV	GGNNCC	4 cut(s)	87, 328, 351, 1090
NmeAIII	GCCGAG	1 cut(s)	326
NspI	RCATGY	1 cut(s)	690
NspV	TTCGAA	1 cut(s)	755
OliI	CACNNNNGTG	1 cut(s)	722
PaeR7I	CTCGAG	1 cut(s)	1045
PauI	GCGCGC	2 cut(s)	45, 129
PceI	AGGCCT	1 cut(s)	1069
PctI	GAATGC	1 cut(s)	1540
PdmI	GAANNNNTTC	1 cut(s)	1260
PfeI	GAWTC	2 cut(s)	752, 1373
PfoI	TCCNGGA	1 cut(s)	1494
PkrI	GCNGC	8 cut(s)	21, 370, 373, 822, 846, 1111, 1329, 1491
PleI	GAGTC	5 cut(s)	522, 535, 616, 1219, 1456
PpsI	GAGTC	5 cut(s)	522, 535, 616, 1219, 1456
Ppu21I	YACGTR	1 cut(s)	381
PpuMI	RGGWCCY	2 cut(s)	85, 1089
Psp5II	RGGWCCY	2 cut(s)	85, 1089
Psp6I	CCWGG	2 cut(s)	771, 875
PspGI	CCWGG	2 cut(s)	771, 875
PspN4I	GGNNCC	4 cut(s)	87, 328, 351, 1090
PspPI	GGNCC	5 cut(s)	85, 1075, 1089, 1522, 1615
PspPPI	RGGWCCY	2 cut(s)	85, 1089
PspXI	VCTCGAGB	1 cut(s)	1045
PsuI	RGATCY	2 cut(s)	864, 1151
PteI	GCGCGC	2 cut(s)	45, 129
PvuII	CAGCTG	1 cut(s)	371
RsaI	GTAC	4 cut(s)	11, 263, 383, 886
RsaNI	GTAC	4 cut(s)	10, 262, 382, 885
RseI	CAYNNNNRTG	2 cut(s)	722, 1419
SatI	GCNGC	8 cut(s)	20, 369, 372, 821, 845, 1110, 1328, 1490
Sau3AI	GATC	8 cut(s)	54, 61, 798, 864, 1151, 1311, 1621, 1625
Sau96I	GGNCC	5 cut(s)	85, 1075, 1089, 1522, 1615
SchI	GAGTC	5 cut(s)	523, 535, 616, 1220, 1457
ScrFI	CCNGG	3 cut(s)	773, 877, 1496
SduI	GDGCHC	3 cut(s)	501, 729, 1052
SfaNI	GCATC	4 cut(s)	83, 467, 1006, 1407
SfcI	CTRYAG	1 cut(s)	232
Sfr274I	CTCGAG	1 cut(s)	1045
SfuI	TTCGAA	1 cut(s)	755
SinI	GGWCC	4 cut(s)	85, 1075, 1089, 1615
SlaI	CTCGAG	1 cut(s)	1045
SmiMI	CAYNNNNRTG	2 cut(s)	722, 1419
SmlI	CTYRAG	7 cut(s)	452, 1045, 1174, 1208, 1377, 1571, 1598
SmoI	CTYRAG	7 cut(s)	452, 1045, 1174, 1208, 1377, 1571, 1598
Sse9I	AATT	6 cut(s)	124, 148, 215, 360, 871, 1386
SseBI	AGGCCT	1 cut(s)	1069
SsiI	CCGC	6 cut(s)	13, 20, 49, 305, 630, 868
SspMI	CTAG	2 cut(s)	714, 1062
StuI	AGGCCT	1 cut(s)	1069
StyD4I	CCNGG	3 cut(s)	771, 875, 1494
TaaI	ACNGT	4 cut(s)	195, 386, 721, 1054
TaiI	ACGT	4 cut(s)	35, 383, 780, 1637
TaqI	TCGA	8 cut(s)	92, 168, 299, 512, 755, 1046, 1310, 1624
TasI	AATT	6 cut(s)	124, 148, 215, 360, 871, 1386
TatI	WGTACW	2 cut(s)	261, 884
TauI	GCSGC	1 cut(s)	22
TfiI	GAWTC	2 cut(s)	752, 1373
TscAI	CASTG	4 cut(s)	726, 968, 994, 1057
TseI	GCWGC	7 cut(s)	368, 371, 820, 844, 1109, 1327, 1489
TspRI	CASTG	4 cut(s)	726, 968, 994, 1057
Vha464I	CTTAAG	1 cut(s)	452
VneI	GTGCAC	1 cut(s)	725
VpaK11BI	GGWCC	4 cut(s)	85, 1075, 1089, 1615
XagI	CCTNNNNNAGG	1 cut(s)	20
XceI	RCATGY	1 cut(s)	690
XhoI	CTCGAG	1 cut(s)	1045
XmiI	GTMKAC	1 cut(s)	1456
XmnI	GAANNNNTTC	1 cut(s)	1260
XspI	CTAG	2 cut(s)	714, 1062

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.