Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr14

Orthogroup ID

OG0006652

Physical Location & Seq

Genomic Coordinates Forward (+)

9198329 .. 9201974

Gene Structure 3646 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD14G1080500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1332 bp

ATGGAAAGGCGAGACAGGTTGAGGATGATCATGGCGAGGCTTGATTCCCAAGGGGAGTTGGAGAGGTTGTTGAAAGTTCATGAGGAGGAGGAGGCTGCGGCTTCTTCTGCTGCATTGGAGGATGGTGATGATCAAATTGTTCAGTACGCTTTTTACACTGAAGGGTCCAAAGCTTTGTTGAATGCTAGGATTGACATTGCCAAGTACTCCATTAGGAGGGCAGCCTCGCGGCTCGAACGGGCTCGAAGGAAGAAGGATGACCCAGATGAGGATATGGATGCAGAGTTGGACTTTGTTTTGGAGCAGGCAAAAAGTTTGGAACTTGATTGCAGTGAGATTGGGGATGATAGGCCACTTTCAGGTTGTTCTTTCTCACACGATAGCCAACTGCTTGCCGCTTGGTGTATTGCTATAAGTGGAGTTGCCAAGTTGTGGAGCATGCCTGATGCAAAGAAGGTTGCCACTTTAAAGGGACACACGGAGCGACTGGCTGATGTTCAGTTTTCTCCTGTGCATAACCTCTTGGCAACTGCCTCTGCTGACCGGACAGCAAGGTTGTGGAATACTGAAGGAACTCAGCTGGTGACATATAAGGGCCATTTAGACCGTCTGGCACGAATTGCCTTTCATCCATCAGGAAAGTACTTGGGTACAACTAGCTTCGACCAGACATGGAGGTTATGGGATGTAGAAACTGGTGAAGAGTTGCGTCCTCAAGATGGTCACAGTGGGAGTGTCTGTGGGATAGACTTCCATCCTGATGGATCATTGGTGGGATCCTCTGGACTGGATGCACTTACTCGTGTTCTTGCACTCAGTTTCTCAGCAAATGGCTATTATTTAGCCACTGGGGGTGAAGACAATACTTGCAGGATATGGGATTTACGAAAAAGGAAATCCATATACACCATTCCAGCACATTCCAATCTCATATCACAGGTCAAGTTTGAGCCTGAAGACGGATATTTCCTTGTAACTGCTTCATATGATTTGACAGCAAAGATATGGTCAGCCCGGGATTTAAGCCTGTCAAAACGCTCTCTGGACATGAAGAAAAAGTTGCATCTTTGGATATTTCAGGAGACGGGCATCAAATTGCTACTGTATCACATGACGGAACCATCAAACTGTGGTCCAGCAGTACCAATGAGAAAGATCAGGCAATGGATGTGGATTACAGTACAAGTTAGAAGGATCAGGCAATGGATGTGGATTCCAGTACAAATTGCAAAGGCCAGGCAATGGATGCGGATTAGGACCTGCTCAGTTCGAGATAGACTTTCGAAAGATGATAAAGATTTGGTGGGTTACTTGCGGATACATGGATTATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000375 GO:0000377 GO:0000398 GO:0001709 GO:0003006 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005681 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0007154 GO:0007267 GO:0007275 GO:0007276 GO:0007292 GO:0008150 GO:0008152 GO:0008380 GO:0009553 GO:0009560 GO:0009561 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0016604 GO:0016607 GO:0017069 GO:0017070 GO:0019953 GO:0022412 GO:0022414 GO:0023052 GO:0030154 GO:0030312 GO:0030532 GO:0030621 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032504 GO:0032991 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0044703 GO:0045165 GO:0046483 GO:0046540 GO:0048229 GO:0048609 GO:0048856 GO:0048869 GO:0051704 GO:0070013 GO:0071704 GO:0071944 GO:0090304 GO:0097159 GO:0097525 GO:0097526 GO:0120114 GO:1901360 GO:1901363 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

PRP4 WD40

Protein Analysis

444

Amino Acids

50.42

Weight (kDa)

8.08

Isoelectric Point (pI)

36.34

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Beta-prop_WDR5	PF25175	116 - 269	2.2e-32	WDR5 beta-propeller domain
Beta-prop_WDR36-Utp21_2nd	PF25168	118 - 223	3.5e-07	WDR36/Utp21 second beta-propeller domain
Beta-prop_EML_2	PF23414	118 - 237	7.1e-11	Echinoderm microtubule-associated protein second beta-propeller
WD40_Gbeta	PF25391	119 - 249	8.4e-12	G protein beta WD-40 repeat protein
Beta-prop_THOC3	PF25174	120 - 193	4.6e-11	THOC3 beta-propeller domain
Beta-prop_WDR3_2nd	PF25172	121 - 269	1.2e-11	WDR3 second beta-propeller domain
Beta-prop_WDR3_1st	PF25173	138 - 265	6.5e-20	WDR3 first beta-propeller domain
WD40_CDC20-Fz	PF24807	141 - 187	2.8e-06	CDC20/Fizzy WD40 domain
WD40_WDHD1_1st	PF24817	141 - 238	5.3e-12	WDHD1 first WD40 domain
WD40_Prp19	PF24814	142 - 267	2.2e-26	Prp19 WD40 domain
Beta-prop_TEP1_2nd	PF25047	151 - 250	3.2e-06	TEP-1 second beta-propeller
WD40	PF00400	151 - 188	4.8e-08	WD domain, G-beta repeat
EIF3I	PF24805	156 - 257	1.8e-11	EIF3I
WDR55	PF24796	161 - 358	4.8e-14	WDR55
WD40_MABP1-WDR62_2nd	PF24782	162 - 258	1.1e-10	MABP1/WDR62 second WD40 domain
Beta-prop_WDR90_POC16_2nd	PF23393	170 - 262	3.1e-09	WDR90/POC16, second beta-propeller
WD40	PF00400	191 - 229	5.3e-06	WD domain, G-beta repeat
Beta-prop_THOC3	PF25174	191 - 265	8.5e-11	THOC3 beta-propeller domain
WD40_WDHD1_1st	PF24817	268 - 345	1.6e-08	WDHD1 first WD40 domain
WD40_CDC20-Fz	PF24807	268 - 354	7.3e-10	CDC20/Fizzy WD40 domain
Beta-prop_WDR3_1st	PF25173	268 - 340	1.5e-11	WDR3 first beta-propeller domain
Beta-prop_THOC3	PF25174	268 - 342	5.6e-15	THOC3 beta-propeller domain
WD40_Prp19	PF24814	268 - 342	2.1e-16	Prp19 WD40 domain
Beta-prop_EML_2	PF23414	269 - 347	7e-06	Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_WDR5	PF25175	269 - 348	2.5e-15	WDR5 beta-propeller domain
WD40_MABP1-WDR62_1st	PF24780	269 - 339	2.2e-06	MABP1/WDR62 first WD40 domain
Beta-prop_CAF1B_HIR1	PF24105	269 - 347	1.6e-07	CAF1B/HIR1 beta-propeller domain
EIF3I	PF24805	269 - 345	7.5e-07	EIF3I
WD40	PF00400	269 - 294	6.7e-07	WD domain, G-beta repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

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Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0006652)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G05720 AT2G41500 AT2G41500
fragaria_vesca	FvH4_6g24750
malus_domestica	MD12G1086300.v1.1 MD14G1080500.v1.1
prunus_persica	Prupe.7G050300_v2.0.a1 Prupe.7G050300_v2.0.a1
pyrus_communis	pycom06g09480 pycom12g07290
rosa_chinensis	RchiOBHm_Chr3g0484331 RchiOBHm_Chr3g0484401 RchiOBHm_Chr3g0484501
rosa_laevigata	RLG00000023231
rosa_multiflora	Rmu_co8232775.1_g000001 Rmu_sc0000295.1_g000017 Rmu_sc0000295.1_g000018 Rmu_sc0001947.1_g000006
rosa_roxburghii	Rroxscaffold_6G00397770
rosa_rugosa	Rorug03G0210900
rosa_samantha	Rh3AG260000 Rh3AG261700 Rh3BG296600 Rh3CG294200 Rh3DG290300
rosa_wichuraiana	Rw3G023450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1268
AccB7I	CCANNNNNTGG	2 cut(s)	432, 1242
AccII	CGCG	1 cut(s)	229
AciI	CCGC	5 cut(s)	98, 229, 396, 1249, 1315
AclWI	GGATC	4 cut(s)	771, 772, 784, 1202
AcuI	CTGAAG	3 cut(s)	180, 588, 975
AfaI	GTAC	7 cut(s)	146, 206, 644, 652, 1143, 1182, 1221
AfiI	CCNNNNNNNGG	7 cut(s)	216, 268, 359, 432, 719, 959, 1242
AgsI	TTSAA	2 cut(s)	73, 181
AjnI	CCWGG	1 cut(s)	1235
AluBI	AGCT	3 cut(s)	173, 580, 660
AluI	AGCT	3 cut(s)	173, 580, 660
Alw26I	GTCTC	2 cut(s)	6, 1076
AlwI	GGATC	4 cut(s)	771, 772, 784, 1202
Ama87I	CYCGRG	1 cut(s)	1014
AoxI	GGCC	3 cut(s)	350, 595, 1233
ApeKI	GCWGC	3 cut(s)	95, 110, 221
ArsI	GACNNNNNNTTYG	2 cut(s)	992, 1024
AspS9I	GGNCC	4 cut(s)	165, 595, 1133, 1257
AsuC2I	CCSGG	2 cut(s)	1015, 1016
AsuHPI	GGTGA	4 cut(s)	137, 595, 710, 866
AsuII	TTCGAA	1 cut(s)	1283
AvaI	CYCGRG	1 cut(s)	1014
AvaII	GGWCC	3 cut(s)	165, 1133, 1257
BamHI	GGATCC	1 cut(s)	776
BanII	GRGCYC	1 cut(s)	244
BauI	CACGAG	1 cut(s)	801
BbsI	GAAGAC	2 cut(s)	864, 963
BbvI	GCAGC	3 cut(s)	82, 97, 233
BccI	CCATC	6 cut(s)	116, 640, 713, 755, 762, 1129
BciT130I	CCWGG	1 cut(s)	1237
BciVI	GTATCC	1 cut(s)	1311
BclI	TGATCA	2 cut(s)	27, 130
BcnI	CCSGG	2 cut(s)	1015, 1016
BcoDI	GTCTC	2 cut(s)	6, 1076
BfaI	CTAG	2 cut(s)	186, 657
BfuAI	ACCTGC	1 cut(s)	1268
BfuI	GTATCC	1 cut(s)	1311
BisI	GCNGC	6 cut(s)	96, 99, 111, 222, 230, 396
BlsI	GCNGC	6 cut(s)	97, 100, 112, 223, 231, 397
BmcAI	AGTACT	2 cut(s)	206, 644
Bme1390I	CCNGG	3 cut(s)	1015, 1016, 1237
Bme18I	GGWCC	3 cut(s)	165, 1133, 1257
BmeT110I	CYCGRG	1 cut(s)	1014
BmgT120I	GGNCC	4 cut(s)	165, 595, 1133, 1257
BmiI	GGNNCC	3 cut(s)	166, 778, 1119
BmrFI	CCNGG	3 cut(s)	1015, 1016, 1237
BmrI	ACTGGG	1 cut(s)	858
BmsI	GCATC	6 cut(s)	268, 436, 781, 1072, 1098, 1236
BmuI	ACTGGG	1 cut(s)	858
BpiI	GAAGAC	2 cut(s)	864, 963
Bpu14I	TTCGAA	1 cut(s)	1283
BpuEI	CTTGAG	1 cut(s)	699
BpuMI	CCSGG	2 cut(s)	1015, 1016
BsaJI	CCNNGG	2 cut(s)	49, 1014
BsaWI	WCCGGW	1 cut(s)	543
BsaXI	ACNNNNNCTCC	4 cut(s)	53, 83, 724, 754
Bsc4I	CCNNNNNNNGG	7 cut(s)	216, 268, 359, 432, 719, 959, 1242
Bse1I	ACTGG	5 cut(s)	492, 700, 792, 853, 1217
Bse3DI	GCAATG	4 cut(s)	195, 1169, 1208, 1247
BseBI	CCWGG	1 cut(s)	1237
BseDI	CCNNGG	2 cut(s)	49, 1014
BseLI	CCNNNNNNNGG	7 cut(s)	216, 268, 359, 432, 719, 959, 1242
BseMI	GCAATG	4 cut(s)	195, 1169, 1208, 1247
BseMII	CTCAG	4 cut(s)	590, 829, 837, 1278
BseNI	ACTGG	5 cut(s)	492, 700, 792, 853, 1217
BseRI	GAGGAG	3 cut(s)	98, 101, 104
BseXI	GCAGC	3 cut(s)	82, 97, 233
Bsh1236I	CGCG	1 cut(s)	229
BshFI	GGCC	3 cut(s)	352, 597, 1235
BsiHKCI	CYCGRG	1 cut(s)	1014
BsiSI	CCGG	2 cut(s)	544, 1015
BslFI	GGGAC	1 cut(s)	486
BslI	CCNNNNNNNGG	7 cut(s)	216, 268, 359, 432, 719, 959, 1242
BsmAI	GTCTC	2 cut(s)	6, 1076
BsmBI	CGTCTC	1 cut(s)	1076
BsmFI	GGGAC	1 cut(s)	486
BsmI	GAATGC	1 cut(s)	187
BsnI	GGCC	3 cut(s)	352, 597, 1235
BsoBI	CYCGRG	1 cut(s)	1014
Bsp119I	TTCGAA	1 cut(s)	1283
Bsp1286I	GDGCHC	1 cut(s)	244
Bsp143I	GATC	6 cut(s)	27, 130, 764, 776, 1155, 1194
BspACI	CCGC	5 cut(s)	98, 229, 396, 1249, 1315
BspANI	GGCC	3 cut(s)	352, 597, 1235
BspCNI	CTCAG	4 cut(s)	589, 828, 836, 1277
BspFNI	CGCG	1 cut(s)	229
BspHI	TCATGA	1 cut(s)	79
BspLI	GGNNCC	3 cut(s)	166, 778, 1119
BspMI	ACCTGC	1 cut(s)	1268
BspPI	GGATC	4 cut(s)	771, 772, 784, 1202
BspT104I	TTCGAA	1 cut(s)	1283
BsrDI	GCAATG	4 cut(s)	195, 1169, 1208, 1247
BsrI	ACTGG	5 cut(s)	492, 700, 792, 853, 1217
BssECI	CCNNGG	2 cut(s)	49, 1014
BssMI	GATC	6 cut(s)	27, 130, 764, 776, 1155, 1194
BssSI	CACGAG	1 cut(s)	801
BssT1I	CCWWGG	1 cut(s)	49
Bst2BI	CACGAG	1 cut(s)	801
Bst2UI	CCWGG	1 cut(s)	1237
Bst4CI	ACNGT	5 cut(s)	608, 728, 1104, 1130, 1180
Bst6I	CTCTTC	1 cut(s)	696
BstAPI	GCANNNNNTGC	2 cut(s)	620, 1246
BstBI	TTCGAA	1 cut(s)	1283
BstC8I	GCNNGC	3 cut(s)	306, 393, 440
BstDEI	CTNAG	4 cut(s)	576, 815, 823, 1264
BstFNI	CGCG	1 cut(s)	229
BstKTI	GATC	6 cut(s)	30, 133, 767, 779, 1158, 1197
BstMAI	GTCTC	2 cut(s)	6, 1076
BstMBI	GATC	6 cut(s)	27, 130, 764, 776, 1155, 1194
BstMWI	GCNNNNNNNGC	3 cut(s)	107, 620, 1246
BstNI	CCWGG	1 cut(s)	1237
BstNSI	RCATGY	1 cut(s)	442
BstSCI	CCNGG	3 cut(s)	1013, 1014, 1235
BstUI	CGCG	1 cut(s)	229
BstV1I	GCAGC	3 cut(s)	82, 97, 233
BstV2I	GAAGAC	2 cut(s)	864, 963
BstX2I	RGATCY	1 cut(s)	776
BstXI	CCANNNNNNTGG	1 cut(s)	761
BstYI	RGATCY	1 cut(s)	776
BsuI	GTATCC	1 cut(s)	1311
BsuRI	GGCC	3 cut(s)	352, 597, 1235
BtsI	GCAGTG	1 cut(s)	337
BtsIMutI	CAGTG	4 cut(s)	156, 337, 733, 846
BveI	ACCTGC	1 cut(s)	1268
Cac8I	GCNNGC	3 cut(s)	306, 393, 440
CciI	TCATGA	1 cut(s)	79
Cfr13I	GGNCC	4 cut(s)	165, 595, 1133, 1257
Cfr9I	CCCGGG	1 cut(s)	1014
CseI	GACGC	1 cut(s)	698
Csp6I	GTAC	7 cut(s)	145, 205, 643, 651, 1142, 1181, 1220
CspCI	CAANNNNNGTGG	4 cut(s)	1151, 1186, 1190, 1225
CviAII	CATG	7 cut(s)	31, 80, 439, 672, 1048, 1111, 1322
CviQI	GTAC	7 cut(s)	145, 205, 643, 651, 1142, 1181, 1220
DdeI	CTNAG	4 cut(s)	576, 815, 823, 1264
DpnI	GATC	6 cut(s)	29, 132, 766, 778, 1157, 1196
DpnII	GATC	6 cut(s)	27, 130, 764, 776, 1155, 1194
DraI	TTTAAA	1 cut(s)	468
Eam1104I	CTCTTC	1 cut(s)	696
EarI	CTCTTC	1 cut(s)	696
Eco130I	CCWWGG	1 cut(s)	49
Eco24I	GRGCYC	1 cut(s)	244
Eco47I	GGWCC	3 cut(s)	165, 1133, 1257
Eco57I	CTGAAG	3 cut(s)	180, 588, 975
Eco88I	CYCGRG	1 cut(s)	1014
EcoO109I	RGGNCCY	1 cut(s)	1257
EcoRII	CCWGG	1 cut(s)	1235
EcoT14I	CCWWGG	1 cut(s)	49
EcoT38I	GRGCYC	1 cut(s)	244
ErhI	CCWWGG	1 cut(s)	49
Esp3I	CGTCTC	1 cut(s)	1076
FaeI	CATG	7 cut(s)	34, 83, 442, 675, 1051, 1114, 1325
FaqI	GGGAC	1 cut(s)	486
FatI	CATG	7 cut(s)	30, 79, 438, 671, 1047, 1110, 1321
FauNDI	CATATG	1 cut(s)	985
FbaI	TGATCA	2 cut(s)	27, 130
Fnu4HI	GCNGC	6 cut(s)	96, 99, 111, 222, 230, 396
FriOI	GRGCYC	1 cut(s)	244
Fsp4HI	GCNGC	6 cut(s)	96, 99, 111, 222, 230, 396
FspBI	CTAG	2 cut(s)	186, 657
GluI	GCNGC	6 cut(s)	96, 99, 111, 222, 230, 396
HaeIII	GGCC	3 cut(s)	352, 597, 1235
HapII	CCGG	2 cut(s)	544, 1015
HgaI	GACGC	1 cut(s)	698
Hin1II	CATG	7 cut(s)	34, 83, 442, 675, 1051, 1114, 1325
HindIII	AAGCTT	1 cut(s)	171
HinfI	GANTC	2 cut(s)	44, 1213
HpaII	CCGG	2 cut(s)	544, 1015
HphI	GGTGA	4 cut(s)	137, 595, 710, 866
Hpy188III	TCNNGA	8 cut(s)	80, 636, 716, 758, 783, 1043, 1079, 1271
HpyAV	CCTTC	6 cut(s)	155, 240, 247, 448, 563, 1185
HpyCH4III	ACNGT	5 cut(s)	608, 728, 1104, 1130, 1180
HpyF10VI	GCNNNNNNNGC	3 cut(s)	107, 620, 1246
HpyF3I	CTNAG	4 cut(s)	576, 815, 823, 1264
Hsp92II	CATG	7 cut(s)	34, 83, 442, 675, 1051, 1114, 1325
Ksp22I	TGATCA	2 cut(s)	27, 130
Kzo9I	GATC	6 cut(s)	27, 130, 764, 776, 1155, 1194
LmnI	GCTCC	3 cut(s)	301, 435, 481
Lsp1109I	GCAGC	3 cut(s)	82, 97, 233
LweI	GCATC	6 cut(s)	268, 436, 781, 1072, 1098, 1236
MaeI	CTAG	2 cut(s)	186, 657
MaeIII	GTNAC	4 cut(s)	583, 722, 973, 1307
MalI	GATC	6 cut(s)	29, 132, 766, 778, 1157, 1196
MboI	GATC	6 cut(s)	27, 130, 764, 776, 1155, 1194
MboII	GAAGA	6 cut(s)	96, 262, 713, 869, 968, 1063
MflI	RGATCY	1 cut(s)	776
MhlI	GDGCHC	1 cut(s)	244
MluCI	AATT	4 cut(s)	135, 618, 1094, 1224
MmeI	TCCRAC	2 cut(s)	39, 267
MseI	TTAA	2 cut(s)	467, 1022
MslI	CAYNNNNRTG	1 cut(s)	759
MspA1I	CMGCKG	1 cut(s)	580
MspI	CCGG	2 cut(s)	544, 1015
MspR9I	CCNGG	3 cut(s)	1015, 1016, 1237
Mva1269I	GAATGC	1 cut(s)	187
MvaI	CCWGG	1 cut(s)	1237
MvnI	CGCG	1 cut(s)	229
MwoI	GCNNNNNNNGC	3 cut(s)	107, 620, 1246
NciI	CCSGG	2 cut(s)	1015, 1016
NdeI	CATATG	1 cut(s)	985
NdeII	GATC	6 cut(s)	27, 130, 764, 776, 1155, 1194
NlaIII	CATG	7 cut(s)	34, 83, 442, 675, 1051, 1114, 1325
NlaIV	GGNNCC	3 cut(s)	166, 778, 1119
NmuCI	GTSAC	2 cut(s)	583, 722
NspI	RCATGY	1 cut(s)	442
NspV	TTCGAA	1 cut(s)	1283
PaeI	GCATGC	1 cut(s)	442
PagI	TCATGA	1 cut(s)	79
PctI	GAATGC	1 cut(s)	187
PfeI	GAWTC	2 cut(s)	44, 1213
PflMI	CCANNNNNTGG	2 cut(s)	432, 1242
PkrI	GCNGC	6 cut(s)	97, 100, 112, 223, 231, 397
PpuMI	RGGWCCY	1 cut(s)	1257
Psp5II	RGGWCCY	1 cut(s)	1257
Psp6I	CCWGG	1 cut(s)	1235
PspGI	CCWGG	1 cut(s)	1235
PspN4I	GGNNCC	3 cut(s)	166, 778, 1119
PspPI	GGNCC	4 cut(s)	165, 595, 1133, 1257
PspPPI	RGGWCCY	1 cut(s)	1257
PsuI	RGATCY	1 cut(s)	776
PvuII	CAGCTG	1 cut(s)	580
RsaI	GTAC	7 cut(s)	146, 206, 644, 652, 1143, 1182, 1221
RsaNI	GTAC	7 cut(s)	145, 205, 643, 651, 1142, 1181, 1220
RseI	CAYNNNNRTG	1 cut(s)	759
SaqAI	TTAA	2 cut(s)	467, 1022
SatI	GCNGC	6 cut(s)	96, 99, 111, 222, 230, 396
Sau3AI	GATC	6 cut(s)	27, 130, 764, 776, 1155, 1194
Sau96I	GGNCC	4 cut(s)	165, 595, 1133, 1257
ScaI	AGTACT	2 cut(s)	206, 644
ScrFI	CCNGG	3 cut(s)	1015, 1016, 1237
SduI	GDGCHC	1 cut(s)	244
SfaNI	GCATC	6 cut(s)	268, 436, 781, 1072, 1098, 1236
SfuI	TTCGAA	1 cut(s)	1283
SinI	GGWCC	3 cut(s)	165, 1133, 1257
SmaI	CCCGGG	1 cut(s)	1016
SmiMI	CAYNNNNRTG	1 cut(s)	759
SmlI	CTYRAG	1 cut(s)	714
SmoI	CTYRAG	1 cut(s)	714
SphI	GCATGC	1 cut(s)	442
Sse9I	AATT	4 cut(s)	135, 618, 1094, 1224
SsiI	CCGC	5 cut(s)	98, 229, 396, 1249, 1315
SspMI	CTAG	2 cut(s)	186, 657
StyD4I	CCNGG	3 cut(s)	1013, 1014, 1235
StyI	CCWWGG	1 cut(s)	49
TaaI	ACNGT	5 cut(s)	608, 728, 1104, 1130, 1180
TaqI	TCGA	5 cut(s)	234, 244, 663, 1270, 1283
TasI	AATT	4 cut(s)	135, 618, 1094, 1224
TatI	WGTACW	4 cut(s)	204, 642, 1180, 1219
TauI	GCSGC	3 cut(s)	101, 232, 398
TfiI	GAWTC	2 cut(s)	44, 1213
Tru1I	TTAA	2 cut(s)	467, 1022
Tru9I	TTAA	2 cut(s)	467, 1022
TscAI	CASTG	4 cut(s)	163, 337, 733, 853
TseFI	GTSAC	2 cut(s)	583, 722
TseI	GCWGC	3 cut(s)	95, 110, 221
Tsp45I	GTSAC	2 cut(s)	583, 722
TspDTI	ATGAA	4 cut(s)	68, 617, 972, 1064
TspGWI	ACGGA	3 cut(s)	494, 975, 1130
TspMI	CCCGGG	1 cut(s)	1014
TspRI	CASTG	4 cut(s)	163, 337, 733, 853
Van91I	CCANNNNNTGG	2 cut(s)	432, 1242
VpaK11BI	GGWCC	3 cut(s)	165, 1133, 1257
XceI	RCATGY	1 cut(s)	442
XmaI	CCCGGG	1 cut(s)	1014
XspI	CTAG	2 cut(s)	186, 657
ZrmI	AGTACT	2 cut(s)	206, 644

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.