MD14G1098000.v1.1

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr14
OG0008872
Physical Location & Seq
Forward (+)
14930092 .. 14937215
7124 bp
Loading structure...
UTR
Exon/CDS
Intron
MD14G1098000.v1.1.491

Sequence Viewer

Length: 4383 bp
ATGTTCAGGCTACACAAGAACAGGCCTGCTAAATCAGGGGAGAGGGTGGATTTCAAGTTCTCCCACTTTAAGGCCCTCCAGGTTCCCAGAGGGTGGGACAAGCTGTTTGTATCAATTGTGTCTGTAGAAACTGGGAAACCAATTGCTAAATCAAGCAAGGCAGTGGTGCGCAACGGAAACTGTCAGTGGACTGAGACTCTTTGCGAATCTATATGGATTTCCCAAGACGAGTCTTCCAAGGAGATGGAAGATTATTTCATCAAGCTTGTCATTTCCATGGGTTCGACAAGATCCGGCATCCTTGGAGAGGTTTCAGTCAATATGTCAGATTACATAAGTTCAACCTCTTCTGCTCCAGTTTCTCTTCCATTGAAAAAGTGCAGTTTTGGGACAATTTTACAGGTAAAAATTAACTGCCTGACACCAAGAAAAAAGCTCAGTGATGAAGAGTCAAAAGAGACGAGCTATCATTCAGAAGAAGTAATTGAACATGGTCATGATGCGGACAGCAAGTCAGATGGATCTAATAGCTCCGTTGTATGGAGTGCTGGATCTTCCTCCAGAAAAGATTTTGGCTTGATCTCAAATCCCGGAGAGCCTGGGAGTCGAGATAGTAGTTTCTCCGCACCAGGTTCACATCGCAGCTATGACTCAGCAGAGGGCTCCATAAGAAGGGATAATATGTCCGCAAGAAGCAACCTTAGTGTTGAAGGCAACCACCTGATAGGAAGACAAGATTCAACCACCTCCCTAATTAGTACAACTCATGGAAATTTTCCTGCTGATATTCGTTCTCTGTCAAACCATTCATCATTTAATTCCAGGGTTAATGGTTCAGGAATTCAGACTCAGAATTCCAGGAAAGATTTTACAGAATCTTCTTTAAGCACCACTGATTCTTCTAAAAACCTTCTGGATGCGGCAGAAGTTACGATTGAAGAGTTACATGCGGAAGCTAAGATGTGGGAGAGGAACGCCAGGAAGCTAATGCTTGATTTGGATATACTGAGGGCAGAGTTCTCTGATCAGTCCAAAAAGCAGGCAAATATTCATGTGGAGCTTTCAGCAGCATATGCAGAACGCGATGGCTTGAAGAAAGAAGTTGAACACTTGCATTTGTTGCTTGAGAATGCAATGGTAAAACAAACAGCCAGTGAGGATTTAACTTCTCAGGATGGAGGAACGCCCGAGATTAAGAAGGCATTCCAAGATGAACTGAACTTTCAAAAAGAATCCACAGCCAATTTGTCCCTGCAGTTGGAGAGAAGTCAAGAATCAAATATTGAGCTGGTTTCAGTTCTCCAGGAGCTGGAAGAGACAATTGAAAAACAAAAGGTGGAATTGGAGAATCTTTCAGAACTACAGTCGACATTTGGTGATATGGAAAACTTGATCAATTTAACTACAGAGGAAAACAGAAATTTAAAGCTTCAGCTGCAACAATTGCAGGAATCAGAGAACAAGTTGCAAGTCGTGGTGCAACAGCTGGAACAAACCGTGGAAGAGAAAAATCATGAGATAGAGAATGGATCGAGTCTGAACGAACACTCCCTTTTGGATATTGAGACAGAATACAAAAGTAAATTGCTTTTGAAGGAACACGAAATTGTTAAACTGAAAGAAAAGGTGTCCGAGTCTCTCAAAGAAAGGCATTCTGCAGAAATGGATTCCATCACCATGAGTGGAAGTGAAGCAGATCTGATCAGTGAAATTGAGGACTTGAAAGAAAAGGTGAACGAGCTAGAACGAGATTGCAATGAGCTGACGGAAGAAAACTTAGAGCTCTTATGCAAGCTTAGGACAGCGAAGAAAAAATCGTCAGGGGGATACGCACCTGTTGAACTTCCAGCCAGTGAGCTTTTAGTCGATTCTTTTACCAGCTTTGAGTCCAAAGTGACTGAAAATAAACCCCAATTACAGAATGCAGAGGAGAAGCTTAACAAGAAAGTGCTTGGGGAGATTACAAATAATAATGATGCTTCAGTTCAAGTACTTGACGGCTTGAAAATGGAACTAGAAAGTAAAGTAAAAGAGCTGGGTAAAGAATTGACGGAGAAGATGTTTGAGATAGAAAAGCTTGAGGTGAACTTACTAACCAAAGAAGAAGAAATTGGTCTTCTAAGAGGGGTCCAAAATGAATTACAAGCTGAGGTTTCCAACCTTCAGAAGGAAAAAATAGAGTTAGAGGAACAGATGGAAGTTGTATTAAGGGAAGGCGATATCAGCTCTAAGTGTTTGAATGATTTGCGGAATGAATTAATGGTGCTTAGCAGAAGTGTGAATTCCCATGTTTCCACACATAAGGTACTTGAAAGGAAATCTTCGGAGCTAGAAGCTGATAAATGTGAACTGGACCTTCATCTATCAGAGTTTCAACAAGAAAACATACAGTTGTCAGCACATATTTCTGCACTTGAAGCTCAACAAAGATGCTTGACGGATGAAAAAGAGGCCAATCAGTTAGAATTAGACAATTCCCAATCTTATTCTCTGAGTCTCCAAGATGAGATTAGTAGATTAAACATTGAGATGATATCTGATAAAGTTGAACTGAAACAGAAATTAAAGGACTTAGAGAGGCAGTGGTCAGAAGCTCGAGAAGAATGTGAATTTCTGAAAGGGGCAAACCCGAAGCTACAAGGTACTGCTGAGAGCCTCATTGAGGAGTGCAATTCTATTCAGAATTCAAATGATGAGTTGAGGAAGCAAAAGCTGGAGTTGCATCAGCTCTGTTCCCTCCTGGAGGCAAAGTTGAATCAATCGCAGGAGAGCTTTACAAATTGCTCCAAAAGAGTTGAAGTGCTGGAAAAAGATCTTTCTTTAATGCTGGAAAATGTCACCTCAAAAGAGGAGAGCCTGAATTCAGAATTAGATGCACTTCTTGATGAAAACATGAAATATAAGGAGAAACTTACATTGGAAGAAAGTTTGTTCAACAAGATGTATTTGGAGAAGACGATTGAAGTTGAGAGCCTTCAGGAAGAGGTAGAACGACTTACCAAGCAATTTGCTGCTACTCATGAAGAAAGAGAAGGACCAGCTTCAGATGCTGTCCAGGAAGCATCCAGACTACGAACTGAGAAGGAAATGCTTCAATCTACTCTCCTAGAGTTTCAATCTAAAGCGATACAGATGGAGGATGAATTGAATATTATGAGAACAGAATCTGAAGCGAAGTTACAAGGCCTATTCGCTGAGCTTGCTGATAAACAAAATCAGGAGTCAACAACAGCTGACCATGAAAAGCTATTGAAGTTGTTGGAGAATTACAAATCAAGTGAAGCAAAACCGAAGACCAATGTGAATGATCTTGAACCAAAGCTTACAGTTTCTGATTATGAACGTCAACAGGTGGTGGAAGAATCCACCAATATGAAGGTTGAATTTGAGAAACTAACTCGTTGTCAGGAGGAAGTTTTGGCTTTCAAGAATGAGCTGGATGCAACCAAGTTCGAGAAAGAAAAATTGGAAGCGTTATTGGATTCAATATCTGAGGAATGTGAAGATCTGAAGGCAGAGAAGAGTTCATTCCATGAGAAGATATCAACATTGGAGAAGGCCTTATTTGACTTGGAGGATTGCCAACGTAATAAAGTTCTTTTGGAGGAAAAATTTCTGCAGATGGAAGGTGATCTAACTGCAAAAGAGGCTTTGTGTGCACAGTATGCCGAGCTGAAGAATGAGCTCAACCAGATCAGGAGAGTCAACGAGCAGTATCAGCTGGAAATACAGCTACTTGAGGATGAGAGAAGTGAGTTCCTAAGAAAGTCTCAAGCCCTTGAACAAGAATTGAAAGTGACAAGGGAAGAAAAAAAGAAACACAGGGATTGTAGCAGTCCAATTTCCAGCTCATCAAAGGGCGGCACCAGAGTTATTCCTGTTGGTGAAGATATGAAGGTCCCAAAAAATGAAATGGTGAGGAACAGCATTCACCGTCGTGATTTTAGAAGGAAGCCAATTTTGAAGAATGGTCAGGTGCTTGGAAATGCAACAGATCAGAATTATCCGTATAGAAACCAGCATCAAAGAGAGGATGATAACGGAGTCGAATTTCATGATGAAAGTCCAAATGACGTTGAAGAACTTGGTTTAAAGATTAAGTTGCTTGAAGATGAACTTGTTAAGGCATTGGAAGTAAATAACACTTACAAAGTTCAACTTGATAGGTGCTTGTCTGAGGCTCGACACAATCATGCAGATGCTCATCGAAATTCAAAAGCTGAAGAAAGACACGAATACTCAAGGTCATCTCTAGAGACGGAACTGAAAGACATTCGCGAGCGCTACTTGCACATGAGCCTGAGATACGCGGAGGTAGAAGCTCAGCGCGAAGAACTTGTGATGAAACTCAAAGTAGCCAAGGGTGGCAAAAGGTGGTTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NT-C2

Protein Analysis

1461

Amino Acids

166.65

Weight (kDa)

4.99

Isoelectric Point (pI)

52.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NT-C2 PF10358 24 - 140 7.4e-13 N-terminal C2 in EEIG1 and EHBP1 proteins
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 170
AccB1I GGYRCC 1 cut(s) 3863
AccB7I CCANNNNNTGG 2 cut(s) 93, 1309
AccI GTMKAC 1 cut(s) 1367
AccII CGCG 4 cut(s) 1083, 4278, 4310, 4329
AciI CCGC 8 cut(s) 503, 624, 687, 920, 950, 2248, 3861, 4310
AclWI GGATC 4 cut(s) 285, 529, 559, 1537
AcuI CTGAAG 9 cut(s) 1415, 1965, 2147, 2960, 3027, 3189, 3530, 3695, 4242
AfaI GTAC 4 cut(s) 760, 1992, 2307, 2644
AfeI AGCGCT 1 cut(s) 4283
AhdI GACNNNNNGTC 1 cut(s) 511
AjnI CCWGG 9 cut(s) 78, 598, 628, 821, 857, 977, 1302, 2739, 3054
AjuI GAANNNNNNNTTGG 6 cut(s) 2094, 2126, 2900, 2932, 3449, 3481
AleI CACNNNNGTG 1 cut(s) 3936
AloI GAACNNNNNNTCC 4 cut(s) 41, 73, 1532, 1564
Alw21I GWGCWC 3 cut(s) 1785, 3661, 3687
Alw26I GTCTC 8 cut(s) 188, 452, 1310, 1559, 1641, 2501, 3774, 4250
Alw44I GTGCAC 1 cut(s) 3657
AlwI GGATC 4 cut(s) 285, 529, 559, 1537
AlwNI CAGNNNCTG 4 cut(s) 1309, 3050, 3167, 3332
Ama87I CYCGRG 2 cut(s) 1187, 2595
Aor51HI AGCGCT 1 cut(s) 4283
AoxI GGCC 5 cut(s) 23, 72, 2451, 3184, 3558
ApaLI GTGCAC 1 cut(s) 3657
ApeKI GCWGC 4 cut(s) 642, 1067, 1435, 3011
ArsI GACNNNNNNTTYG 2 cut(s) 89, 121
AseI ATTAAT 1 cut(s) 2258
Asp700I GAANNNNTTC 3 cut(s) 1202, 3090, 3612
AspLEI GCGC 3 cut(s) 171, 4284, 4329
AspS9I GGNCC 5 cut(s) 73, 2128, 2353, 3035, 3898
AsuC2I CCSGG 1 cut(s) 591
AsuHPI GGTGA 9 cut(s) 1388, 1666, 1744, 2095, 2830, 3641, 3896, 3923, 3928
AvaI CYCGRG 2 cut(s) 1187, 2595
AvaII GGWCC 4 cut(s) 2128, 2353, 3035, 3898
BaeGI GKGCMC 1 cut(s) 3661
BanI GGYRCC 1 cut(s) 3863
BanII GRGCYC 3 cut(s) 665, 1785, 3687
BarI GAAGNNNNNNTAC 2 cut(s) 3162, 3194
BbsI GAAGAC 5 cut(s) 225, 736, 2108, 2960, 3299
Bbv12I GWGCWC 3 cut(s) 1785, 3661, 3687
BbvCI CCTCAGC 1 cut(s) 2148
BbvI GCAGC 4 cut(s) 654, 1079, 1422, 2998
BccI CCATC 8 cut(s) 238, 512, 1079, 1169, 1679, 2188, 3127, 3616
BceAI ACGGC 1 cut(s) 2014
BciT130I CCWGG 9 cut(s) 80, 600, 630, 823, 859, 979, 1304, 2741, 3056
BciVI GTATCC 1 cut(s) 1820
BclI TGATCA 3 cut(s) 1024, 1392, 1701
BcnI CCSGG 1 cut(s) 591
BcoDI GTCTC 8 cut(s) 188, 452, 1310, 1559, 1641, 2501, 3774, 4250
BfaI CTAG 5 cut(s) 1742, 2015, 2330, 3107, 4253
BfmI CTRYAG 6 cut(s) 123, 1253, 1361, 1404, 1656, 3617
BfoI RGCGCY 1 cut(s) 4285
BfuI GTATCC 1 cut(s) 1820
BglII AGATCT 3 cut(s) 1696, 2812, 3505
BisI GCNGC 6 cut(s) 643, 921, 1068, 1436, 3012, 3862
BlpI GCTNAGC 3 cut(s) 2267, 3195, 4323
BlsI GCNGC 6 cut(s) 644, 922, 1069, 1437, 3013, 3863
BmcAI AGTACT 1 cut(s) 1992
Bme18I GGWCC 4 cut(s) 2128, 2353, 3035, 3898
BmeRI GACNNNNNGTC 1 cut(s) 511
BmeT110I CYCGRG 2 cut(s) 1187, 2595
BmgT120I GGNCC 5 cut(s) 73, 2128, 2353, 3035, 3898
BmiI GGNNCC 5 cut(s) 84, 664, 2129, 3865, 3900
BmrI ACTGGG 1 cut(s) 141
BmuI ACTGGG 1 cut(s) 141
BpiI GAAGAC 5 cut(s) 225, 736, 2108, 2960, 3299
BpmI CTGGAG 6 cut(s) 62, 339, 544, 1286, 2735, 2762
Bpu10I CCTNAGC 2 cut(s) 1796, 2148
Bpu1102I GCTNAGC 3 cut(s) 2267, 3195, 4323
BpuEI CTTGAG 5 cut(s) 1145, 2099, 3756, 3758, 4225
BpuMI CCSGG 1 cut(s) 591
BsaBI GATNNNNATC 1 cut(s) 4203
BsaJI CCNNGG 7 cut(s) 237, 276, 301, 599, 822, 1497, 4359
BsaXI ACNNNNNCTCC 6 cut(s) 1532, 1562, 2045, 2075, 2735, 2765
Bse1I ACTGG 5 cut(s) 136, 356, 1152, 1851, 2355
Bse3DI GCAATG 2 cut(s) 1140, 1762
Bse8I GATNNNNATC 1 cut(s) 4203
BseBI CCWGG 9 cut(s) 80, 600, 630, 823, 859, 979, 1304, 2741, 3056
BseDI CCNNGG 7 cut(s) 237, 276, 301, 599, 822, 1497, 4359
BseGI GGATG 9 cut(s) 297, 922, 1180, 2446, 3062, 3145, 3445, 3748, 4039
BseJI GATNNNNATC 1 cut(s) 4203
BseMI GCAATG 2 cut(s) 1140, 1762
BseNI ACTGG 5 cut(s) 136, 356, 1152, 1851, 2355
BseRI GAGGAG 3 cut(s) 1943, 2678, 2864
BseSI GKGCMC 1 cut(s) 3661
BseXI GCAGC 4 cut(s) 654, 1079, 1422, 2998
BseYI CCCAGC 1 cut(s) 2035
BsgI GTGCAG 2 cut(s) 400, 2394
Bsh1236I CGCG 4 cut(s) 1083, 4278, 4310, 4329
BshFI GGCC 5 cut(s) 25, 74, 2453, 3186, 3560
BshNI GGYRCC 1 cut(s) 3863
BsiHKAI GWGCWC 3 cut(s) 1785, 3661, 3687
BsiHKCI CYCGRG 2 cut(s) 1187, 2595
BsiSI CCGG 2 cut(s) 294, 591
BslFI GGGAC 4 cut(s) 110, 403, 1234, 3884
BsmAI GTCTC 8 cut(s) 188, 452, 1310, 1559, 1641, 2501, 3774, 4250
BsmBI CGTCTC 2 cut(s) 452, 4250
BsmFI GGGAC 4 cut(s) 110, 403, 1234, 3884
BsmI GAATGC 5 cut(s) 1135, 1202, 1651, 1927, 3927
BsnI GGCC 5 cut(s) 25, 74, 2453, 3186, 3560
BsoBI CYCGRG 2 cut(s) 1187, 2595
Bsp1286I GDGCHC 4 cut(s) 665, 1785, 3661, 3687
Bsp1720I GCTNAGC 3 cut(s) 2267, 3195, 4323
Bsp19I CCATGG 1 cut(s) 276
Bsp68I TCGCGA 1 cut(s) 4278
BspACI CCGC 8 cut(s) 503, 624, 687, 920, 950, 2248, 3861, 4310
BspANI GGCC 5 cut(s) 25, 74, 2453, 3186, 3560
BspFNI CGCG 4 cut(s) 1083, 4278, 4310, 4329
BspHI TCATGA 4 cut(s) 496, 1513, 3019, 4054
BspLI GGNNCC 5 cut(s) 84, 664, 2129, 3865, 3900
BspMAI CTGCAG 3 cut(s) 1257, 1660, 3621
BspPI GGATC 4 cut(s) 285, 529, 559, 1537
BspT107I GGYRCC 1 cut(s) 3863
BsrDI GCAATG 2 cut(s) 1140, 1762
BsrI ACTGG 5 cut(s) 136, 356, 1152, 1851, 2355
BssECI CCNNGG 7 cut(s) 237, 276, 301, 599, 822, 1497, 4359
BssT1I CCWWGG 4 cut(s) 237, 276, 301, 4359
Bst2UI CCWGG 9 cut(s) 80, 600, 630, 823, 859, 979, 1304, 2741, 3056
Bst4CI ACNGT 7 cut(s) 182, 1365, 1498, 2391, 3328, 3663, 3935
Bst6I CTCTTC 8 cut(s) 352, 369, 441, 933, 1308, 1497, 2976, 3515
BstAPI GCANNNNNTGC 4 cut(s) 1073, 1120, 1444, 3665
BstC8I GCNNGC 5 cut(s) 27, 1041, 1793, 3201, 4280
BstDSI CCRYGG 2 cut(s) 276, 1497
BstENI CCTNNNNNAGG 4 cut(s) 305, 2165, 2660, 2741
BstF5I GGATG 9 cut(s) 297, 922, 1180, 2446, 3062, 3145, 3445, 3748, 4039
BstFNI CGCG 4 cut(s) 1083, 4278, 4310, 4329
BstH2I RGCGCY 1 cut(s) 4285
BstHHI GCGC 3 cut(s) 171, 4284, 4329
BstMAI GTCTC 8 cut(s) 188, 452, 1310, 1559, 1641, 2501, 3774, 4250
BstNI CCWGG 9 cut(s) 80, 600, 630, 823, 859, 979, 1304, 2741, 3056
BstNSI RCATGY 1 cut(s) 950
BstSFI CTRYAG 6 cut(s) 123, 1253, 1361, 1404, 1656, 3617
BstSLI GKGCMC 1 cut(s) 3661
BstUI CGCG 4 cut(s) 1083, 4278, 4310, 4329
BstV1I GCAGC 4 cut(s) 654, 1079, 1422, 2998
BstV2I GAAGAC 5 cut(s) 225, 736, 2108, 2960, 3299
BstX2I RGATCY 6 cut(s) 290, 521, 551, 1696, 2812, 3505
BstXI CCANNNNNNTGG 1 cut(s) 244
BstYI RGATCY 6 cut(s) 290, 521, 551, 1696, 2812, 3505
BsuI GTATCC 1 cut(s) 1820
BsuRI GGCC 5 cut(s) 25, 74, 2453, 3186, 3560
BtgI CCRYGG 2 cut(s) 276, 1497
BtgZI GCGATG 2 cut(s) 623, 1098
BtsCI GGATG 9 cut(s) 297, 922, 1180, 2446, 3062, 3145, 3445, 3748, 4039
BtsI GCAGTG 2 cut(s) 168, 2588
BtsIMutI CAGTG 8 cut(s) 168, 191, 445, 891, 1159, 1711, 1858, 2588
BtuMI TCGCGA 1 cut(s) 4278
Cac8I GCNNGC 5 cut(s) 27, 1041, 1793, 3201, 4280
CaiI CAGNNNCTG 4 cut(s) 1309, 3050, 3167, 3332
CciI TCATGA 4 cut(s) 496, 1513, 3019, 4054
CfoI GCGC 3 cut(s) 171, 4284, 4329
Cfr13I GGNCC 5 cut(s) 73, 2128, 2353, 3035, 3898
CsiI ACCWGGT 1 cut(s) 628
Csp6I GTAC 4 cut(s) 759, 1991, 2306, 2643
CviQI GTAC 4 cut(s) 759, 1991, 2306, 2643
DraI TTTAAA 2 cut(s) 1425, 4092
DriI GACNNNNNGTC 1 cut(s) 511
Eam1104I CTCTTC 8 cut(s) 352, 369, 441, 933, 1308, 1497, 2976, 3515
Eam1105I GACNNNNNGTC 1 cut(s) 511
EarI CTCTTC 8 cut(s) 352, 369, 441, 933, 1308, 1497, 2976, 3515
Ecl136II GAGCTC 2 cut(s) 1783, 3685
Eco130I CCWWGG 4 cut(s) 237, 276, 301, 4359
Eco147I AGGCCT 3 cut(s) 25, 3186, 3560
Eco24I GRGCYC 3 cut(s) 665, 1785, 3687
Eco32I GATATC 3 cut(s) 2221, 2535, 3543
Eco47I GGWCC 4 cut(s) 2128, 2353, 3035, 3898
Eco47III AGCGCT 1 cut(s) 4283
Eco53kI GAGCTC 2 cut(s) 1783, 3685
Eco57I CTGAAG 9 cut(s) 1415, 1965, 2147, 2960, 3027, 3189, 3530, 3695, 4242
Eco88I CYCGRG 2 cut(s) 1187, 2595
EcoICRI GAGCTC 2 cut(s) 1783, 3685
EcoNI CCTNNNNNAGG 4 cut(s) 305, 2165, 2660, 2741
EcoO109I RGGNCCY 2 cut(s) 73, 3898
EcoRI GAATTC 5 cut(s) 840, 853, 2281, 2683, 2860
EcoRII CCWGG 9 cut(s) 78, 598, 628, 821, 857, 977, 1302, 2739, 3054
EcoRV GATATC 3 cut(s) 2221, 2535, 3543
EcoT14I CCWWGG 4 cut(s) 237, 276, 301, 4359
EcoT38I GRGCYC 3 cut(s) 665, 1785, 3687
ErhI CCWWGG 4 cut(s) 237, 276, 301, 4359
Esp3I CGTCTC 2 cut(s) 452, 4250
FalI AAGNNNNNCTT 6 cut(s) 2305, 2337, 4101, 4133, 4143, 4175
FaqI GGGAC 4 cut(s) 110, 403, 1234, 3884
FauNDI CATATG 1 cut(s) 1072
FbaI TGATCA 3 cut(s) 1024, 1392, 1701
FblI GTMKAC 1 cut(s) 1367
Fnu4HI GCNGC 6 cut(s) 643, 921, 1068, 1436, 3012, 3862
FokI GGATG 9 cut(s) 284, 929, 1187, 2453, 3049, 3152, 3452, 3755, 4046
FriOI GRGCYC 3 cut(s) 665, 1785, 3687
Fsp4HI GCNGC 6 cut(s) 643, 921, 1068, 1436, 3012, 3862
FspBI CTAG 5 cut(s) 1742, 2015, 2330, 3107, 4253
FspI TGCGCA 1 cut(s) 170
GlaI GCGC 3 cut(s) 170, 4283, 4328
GluI GCNGC 6 cut(s) 643, 921, 1068, 1436, 3012, 3862
GsaI CCCAGC 1 cut(s) 2039
GsuI CTGGAG 6 cut(s) 62, 339, 544, 1286, 2735, 2762
HaeII RGCGCY 1 cut(s) 4285
HaeIII GGCC 5 cut(s) 25, 74, 2453, 3186, 3560
HapII CCGG 2 cut(s) 294, 591
HhaI GCGC 3 cut(s) 171, 4284, 4329
Hin6I GCGC 3 cut(s) 169, 4282, 4327
HinP1I GCGC 3 cut(s) 169, 4282, 4327
HincII GTYRAC 4 cut(s) 1368, 3225, 3347, 3706
HindII GTYRAC 4 cut(s) 1368, 3225, 3347, 3706
HindIII AAGCTT 6 cut(s) 263, 1427, 1793, 1934, 2075, 3320
HpaII CCGG 2 cut(s) 294, 591
HphI GGTGA 9 cut(s) 1388, 1666, 1744, 2095, 2830, 3641, 3896, 3923, 3928
Hpy99I CGWCG 1 cut(s) 3939
HpyCH4III ACNGT 7 cut(s) 182, 1365, 1498, 2391, 3328, 3663, 3935
HpyCH4IV ACGT 3 cut(s) 3343, 3586, 4074
HpySE526I ACGT 3 cut(s) 3343, 3586, 4074
HspAI GCGC 3 cut(s) 169, 4282, 4327
Ksp22I TGATCA 3 cut(s) 1024, 1392, 1701
LmnI GCTCC 7 cut(s) 358, 536, 668, 1057, 1306, 2326, 2789
Lsp1109I GCAGC 4 cut(s) 654, 1079, 1422, 2998
MabI ACCWGGT 1 cut(s) 628
MaeI CTAG 5 cut(s) 1742, 2015, 2330, 3107, 4253
MaeII ACGT 3 cut(s) 3343, 3586, 4074
MaeIII GTNAC 6 cut(s) 928, 942, 1894, 2836, 3177, 3796
MfeI CAATTG 4 cut(s) 114, 141, 1320, 1442
MflI RGATCY 6 cut(s) 290, 521, 551, 1696, 2812, 3505
MhlI GDGCHC 4 cut(s) 665, 1785, 3661, 3687
MmeI TCCRAC 3 cut(s) 1239, 2181, 3240
MroXI GAANNNNTTC 3 cut(s) 1202, 3090, 3612
MslI CAYNNNNRTG 8 cut(s) 275, 495, 1676, 2528, 3371, 3936, 4191, 4197
MspA1I CMGCKG 4 cut(s) 1435, 1486, 3233, 3721
MspI CCGG 2 cut(s) 294, 591
MunI CAATTG 4 cut(s) 114, 141, 1320, 1442
Mva1269I GAATGC 5 cut(s) 1135, 1202, 1651, 1927, 3927
MvaI CCWGG 9 cut(s) 80, 600, 630, 823, 859, 979, 1304, 2741, 3056
MvnI CGCG 4 cut(s) 1083, 4278, 4310, 4329
NciI CCSGG 1 cut(s) 591
NcoI CCATGG 1 cut(s) 276
NdeI CATATG 1 cut(s) 1072
NlaIV GGNNCC 5 cut(s) 84, 664, 2129, 3865, 3900
NmeAIII GCCGAG 1 cut(s) 3694
NmuCI GTSAC 3 cut(s) 1894, 2836, 3796
NruI TCGCGA 1 cut(s) 4278
NsbI TGCGCA 1 cut(s) 170
NspI RCATGY 1 cut(s) 950
OliI CACNNNNGTG 1 cut(s) 3936
PaeR7I CTCGAG 1 cut(s) 2595
PagI TCATGA 4 cut(s) 496, 1513, 3019, 4054
PceI AGGCCT 3 cut(s) 25, 3186, 3560
PctI GAATGC 5 cut(s) 1135, 1202, 1651, 1927, 3927
PdmI GAANNNNTTC 3 cut(s) 1202, 3090, 3612
PflMI CCANNNNNTGG 2 cut(s) 93, 1309
PfoI TCCNGGA 5 cut(s) 589, 857, 1302, 2739, 3054
PkrI GCNGC 6 cut(s) 644, 922, 1069, 1437, 3013, 3863
PpuMI RGGWCCY 1 cut(s) 3898
PshBI ATTAAT 1 cut(s) 2258
Psp124BI GAGCTC 2 cut(s) 1785, 3687
Psp5II RGGWCCY 1 cut(s) 3898
Psp6I CCWGG 9 cut(s) 78, 598, 628, 821, 857, 977, 1302, 2739, 3054
PspFI CCCAGC 1 cut(s) 2035
PspGI CCWGG 9 cut(s) 78, 598, 628, 821, 857, 977, 1302, 2739, 3054
PspN4I GGNNCC 5 cut(s) 84, 664, 2129, 3865, 3900
PspPI GGNCC 5 cut(s) 73, 2128, 2353, 3035, 3898
PspPPI RGGWCCY 1 cut(s) 3898
PstI CTGCAG 3 cut(s) 1257, 1660, 3621
PstNI CAGNNNCTG 4 cut(s) 1309, 3050, 3167, 3332
PsuI RGATCY 6 cut(s) 290, 521, 551, 1696, 2812, 3505
PvuII CAGCTG 4 cut(s) 1435, 1486, 3233, 3721
RruI TCGCGA 1 cut(s) 4278
RsaI GTAC 4 cut(s) 760, 1992, 2307, 2644
RsaNI GTAC 4 cut(s) 759, 1991, 2306, 2643
RseI CAYNNNNRTG 8 cut(s) 275, 495, 1676, 2528, 3371, 3936, 4191, 4197
SacI GAGCTC 2 cut(s) 1785, 3687
SalI GTCGAC 1 cut(s) 1366
SatI GCNGC 6 cut(s) 643, 921, 1068, 1436, 3012, 3862
Sau96I GGNCC 5 cut(s) 73, 2128, 2353, 3035, 3898
ScaI AGTACT 1 cut(s) 1992
SduI GDGCHC 4 cut(s) 665, 1785, 3661, 3687
SexAI ACCWGGT 1 cut(s) 628
SfcI CTRYAG 6 cut(s) 123, 1253, 1361, 1404, 1656, 3617
Sfr274I CTCGAG 1 cut(s) 2595
SinI GGWCC 4 cut(s) 2128, 2353, 3035, 3898
SlaI CTCGAG 1 cut(s) 2595
SmiMI CAYNNNNRTG 8 cut(s) 275, 495, 1676, 2528, 3371, 3936, 4191, 4197
SmlI CTYRAG 6 cut(s) 1124, 2078, 2595, 3737, 3771, 4240
SmoI CTYRAG 6 cut(s) 1124, 2078, 2595, 3737, 3771, 4240
SseBI AGGCCT 3 cut(s) 25, 3186, 3560
SsiI CCGC 8 cut(s) 503, 624, 687, 920, 950, 2248, 3861, 4310
SspI AATATT 3 cut(s) 1048, 1282, 3151
SspMI CTAG 5 cut(s) 1742, 2015, 2330, 3107, 4253
SstI GAGCTC 2 cut(s) 1785, 3687
StuI AGGCCT 3 cut(s) 25, 3186, 3560
StyI CCWWGG 4 cut(s) 237, 276, 301, 4359
TaaI ACNGT 7 cut(s) 182, 1365, 1498, 2391, 3328, 3663, 3935
TaiI ACGT 3 cut(s) 3346, 3589, 4077
TatI WGTACW 2 cut(s) 758, 1990
TauI GCSGC 2 cut(s) 923, 3864
TscAI CASTG 8 cut(s) 168, 191, 445, 898, 1159, 1711, 1858, 2588
TseFI GTSAC 3 cut(s) 1894, 2836, 3796
TseI GCWGC 4 cut(s) 642, 1067, 1435, 3011
Tsp45I GTSAC 3 cut(s) 1894, 2836, 3796
TspGWI ACGGA 8 cut(s) 189, 523, 1781, 2066, 2453, 3996, 4056, 4274
TspRI CASTG 8 cut(s) 168, 191, 445, 898, 1159, 1711, 1858, 2588
Van91I CCANNNNNTGG 2 cut(s) 93, 1309
VneI GTGCAC 1 cut(s) 3657
VpaK11BI GGWCC 4 cut(s) 2128, 2353, 3035, 3898
VspI ATTAAT 1 cut(s) 2258
XagI CCTNNNNNAGG 4 cut(s) 305, 2165, 2660, 2741
XbaI TCTAGA 1 cut(s) 4252
XceI RCATGY 1 cut(s) 950
XhoI CTCGAG 1 cut(s) 2595
XmiI GTMKAC 1 cut(s) 1367
XmnI GAANNNNTTC 3 cut(s) 1202, 3090, 3612
XspI CTAG 5 cut(s) 1742, 2015, 2330, 3107, 4253
ZrmI AGTACT 1 cut(s) 1992
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.