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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_6g17113 FvH4_6g17113 FvH4_6g17113 |
| malus_domestica | MD12G1103600.v1.1 MD14G1098000.v1.1 |
| prunus_persica | Prupe.7G123700_v2.0.a1 Prupe.7G123700_v2.0.a1 |
| pyrus_communis | pycom12g10210 pycom12g10220 pycom14g09580 |
| rosa_chinensis | RchiOBHm_Chr3g0471201 |
| rosa_laevigata | RLG00000024198 |
| rosa_multiflora | Rmu_co8155386.1_g000001 Rmu_co8183594.1_g000001 Rmu_sc0031310.1_g000001 |
| rosa_roxburghii | Rroxscaffold_6G00410230 |
| rosa_rugosa | Rorug03G0116000 Rorug03G0116100 |
| rosa_samantha | Rh3AG165000 Rh3BG190600 Rh3CG180900 Rh3DG185200 |
| rosa_wichuraiana | Rw3G015560 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 3780 |
| Acc36I | ACCTGC | 2 cut(s) | 233, 864 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 913 |
| AccII | CGCG | 2 cut(s) | 1033, 3155 |
| AciI | CCGC | 3 cut(s) | 531, 3331, 3818 |
| AclWI | GGATC | 7 cut(s) | 129, 142, 172, 284, 297, 443, 3546 |
| AcuI | CTGAAG | 9 cut(s) | 842, 1911, 2564, 2631, 2681, 3002, 3242, 3407, 3591 |
| AdeI | CACNNNGTG | 2 cut(s) | 1836, 2486 |
| AfaI | GTAC | 4 cut(s) | 145, 1186, 1596, 2338 |
| AfeI | AGCGCT | 2 cut(s) | 2375, 3917 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 285, 913, 2467, 2506 |
| AflII | CTTAAG | 1 cut(s) | 1400 |
| AflIII | ACRYGT | 1 cut(s) | 1031 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 78 |
| AhlI | ACTAGT | 4 cut(s) | 368, 503, 3643, 3970 |
| AjnI | CCWGG | 7 cut(s) | 202, 211, 379, 431, 906, 1715, 2823 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 3056, 3088, 3161, 3193 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 427, 459 |
| Alw21I | GWGCWC | 4 cut(s) | 1737, 1827, 1872, 3399 |
| Alw44I | GTGCAC | 1 cut(s) | 1733 |
| AlwI | GGATC | 7 cut(s) | 129, 142, 172, 284, 297, 443, 3546 |
| AlwNI | CAGNNNCTG | 4 cut(s) | 913, 1090, 1102, 2939 |
| Ama87I | CYCGRG | 3 cut(s) | 2199, 3245, 3449 |
| Aor51HI | AGCGCT | 2 cut(s) | 2375, 3917 |
| AoxI | GGCC | 1 cut(s) | 2788 |
| ApaLI | GTGCAC | 1 cut(s) | 1733 |
| ApeKI | GCWGC | 7 cut(s) | 239, 255, 677, 1039, 1084, 1087, 1875 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 454, 1156, 3239 |
| AspLEI | GCGC | 2 cut(s) | 2376, 3918 |
| AspS9I | GGNCC | 2 cut(s) | 853, 1272 |
| AsuHPI | GGTGA | 6 cut(s) | 332, 480, 1304, 1819, 2593, 3353 |
| AvaI | CYCGRG | 3 cut(s) | 2199, 3245, 3449 |
| AvaII | GGWCC | 2 cut(s) | 853, 1272 |
| BaeGI | GKGCMC | 1 cut(s) | 1737 |
| BamHI | GGATCC | 2 cut(s) | 134, 289 |
| BanII | GRGCYC | 3 cut(s) | 1723, 1827, 3399 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 298, 330, 2766, 2798 |
| BauI | CACGAG | 1 cut(s) | 3696 |
| BbsI | GAAGAC | 2 cut(s) | 349, 2906 |
| Bbv12I | GWGCWC | 4 cut(s) | 1737, 1827, 1872, 3399 |
| BbvI | GCAGC | 7 cut(s) | 226, 267, 689, 1026, 1096, 1099, 1887 |
| BccI | CCATC | 9 cut(s) | 125, 415, 934, 1543, 2128, 2425, 2504, 2830, 3328 |
| BceAI | ACGGC | 2 cut(s) | 136, 3293 |
| BciT130I | CCWGG | 7 cut(s) | 204, 213, 381, 433, 908, 1717, 2825 |
| BciVI | GTATCC | 1 cut(s) | 3082 |
| BclI | TGATCA | 2 cut(s) | 634, 1305 |
| BcuI | ACTAGT | 4 cut(s) | 368, 503, 3643, 3970 |
| BfmI | CTRYAG | 8 cut(s) | 240, 857, 1008, 1260, 1422, 2993, 3098, 3440 |
| BfoI | RGCGCY | 2 cut(s) | 2377, 3919 |
| BfrI | CTTAAG | 1 cut(s) | 1400 |
| BfuAI | ACCTGC | 2 cut(s) | 233, 864 |
| BfuI | GTATCC | 1 cut(s) | 3082 |
| BglII | AGATCT | 5 cut(s) | 1300, 1636, 2416, 2692, 3479 |
| BisI | GCNGC | 7 cut(s) | 240, 256, 678, 1040, 1085, 1088, 1876 |
| BlpI | GCTNAGC | 4 cut(s) | 1871, 2025, 3381, 3957 |
| BlsI | GCNGC | 7 cut(s) | 241, 257, 679, 1041, 1086, 1089, 1877 |
| BmcAI | AGTACT | 1 cut(s) | 1596 |
| Bme1390I | CCNGG | 7 cut(s) | 204, 213, 381, 433, 908, 1717, 2825 |
| Bme18I | GGWCC | 2 cut(s) | 853, 1272 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 78 |
| BmeT110I | CYCGRG | 3 cut(s) | 2199, 3245, 3449 |
| BmgT120I | GGNCC | 2 cut(s) | 853, 1272 |
| BmiI | GGNNCC | 5 cut(s) | 136, 277, 291, 329, 872 |
| BmrFI | CCNGG | 7 cut(s) | 204, 213, 381, 433, 908, 1717, 2825 |
| BmsI | GCATC | 6 cut(s) | 2467, 2675, 3367, 3676, 3723, 3811 |
| BpiI | GAAGAC | 2 cut(s) | 349, 2906 |
| BpmI | CTGGAG | 4 cut(s) | 225, 415, 890, 1703 |
| Bpu1102I | GCTNAGC | 4 cut(s) | 1871, 2025, 3381, 3957 |
| BpuEI | CTTGAG | 8 cut(s) | 762, 1619, 2303, 3080, 3185, 3527, 3758, 3968 |
| BsaBI | GATNNNNATC | 1 cut(s) | 3825 |
| BsaI | GGTCTC | 1 cut(s) | 2249 |
| BsaJI | CCNNGG | 2 cut(s) | 1716, 2250 |
| BsaWI | WCCGGW | 1 cut(s) | 137 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 2339, 2369 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 285, 913, 2467, 2506 |
| Bse1I | ACTGG | 7 cut(s) | 109, 322, 1686, 1697, 1959, 3090, 3403 |
| Bse3DI | GCAATG | 4 cut(s) | 840, 1885, 2339, 2439 |
| Bse8I | GATNNNNATC | 1 cut(s) | 3825 |
| BseBI | CCWGG | 7 cut(s) | 204, 213, 381, 433, 908, 1717, 2825 |
| BseDI | CCNNGG | 2 cut(s) | 1716, 2250 |
| BseJI | GATNNNNATC | 1 cut(s) | 3825 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 285, 913, 2467, 2506 |
| BseMI | GCAATG | 4 cut(s) | 840, 1885, 2339, 2439 |
| BseNI | ACTGG | 7 cut(s) | 109, 322, 1686, 1697, 1959, 3090, 3403 |
| BseRI | GAGGAG | 6 cut(s) | 563, 1028, 1547, 2312, 3467, 3470 |
| BseSI | GKGCMC | 1 cut(s) | 1737 |
| BseXI | GCAGC | 7 cut(s) | 226, 267, 689, 1026, 1096, 1099, 1887 |
| BsgI | GTGCAG | 1 cut(s) | 1103 |
| Bsh1236I | CGCG | 2 cut(s) | 1033, 3155 |
| BshFI | GGCC | 1 cut(s) | 2790 |
| BsiHKAI | GWGCWC | 4 cut(s) | 1737, 1827, 1872, 3399 |
| BsiHKCI | CYCGRG | 3 cut(s) | 2199, 3245, 3449 |
| BsiSI | CCGG | 1 cut(s) | 138 |
| BslFI | GGGAC | 2 cut(s) | 1443, 3472 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 285, 913, 2467, 2506 |
| BsmFI | GGGAC | 2 cut(s) | 1443, 3472 |
| BsmI | GAATGC | 1 cut(s) | 589 |
| BsnI | GGCC | 1 cut(s) | 2790 |
| Bso31I | GGTCTC | 1 cut(s) | 2249 |
| BsoBI | CYCGRG | 3 cut(s) | 2199, 3245, 3449 |
| Bsp1286I | GDGCHC | 5 cut(s) | 1723, 1737, 1827, 1872, 3399 |
| Bsp1720I | GCTNAGC | 4 cut(s) | 1871, 2025, 3381, 3957 |
| BspACI | CCGC | 3 cut(s) | 531, 3331, 3818 |
| BspANI | GGCC | 1 cut(s) | 2790 |
| BspFNI | CGCG | 2 cut(s) | 1033, 3155 |
| BspHI | TCATGA | 1 cut(s) | 1576 |
| BspLI | GGNNCC | 5 cut(s) | 136, 277, 291, 329, 872 |
| BspMAI | CTGCAG | 5 cut(s) | 244, 861, 1264, 1426, 2997 |
| BspMI | ACCTGC | 2 cut(s) | 233, 864 |
| BspPI | GGATC | 7 cut(s) | 129, 142, 172, 284, 297, 443, 3546 |
| BspQI | GCTCTTC | 1 cut(s) | 3406 |
| BspTI | CTTAAG | 1 cut(s) | 1400 |
| BspTNI | GGTCTC | 1 cut(s) | 2249 |
| BsrDI | GCAATG | 4 cut(s) | 840, 1885, 2339, 2439 |
| BsrI | ACTGG | 7 cut(s) | 109, 322, 1686, 1697, 1959, 3090, 3403 |
| BssECI | CCNNGG | 2 cut(s) | 1716, 2250 |
| BssSI | CACGAG | 1 cut(s) | 3696 |
| Bst2BI | CACGAG | 1 cut(s) | 3696 |
| Bst2UI | CCWGG | 7 cut(s) | 204, 213, 381, 433, 908, 1717, 2825 |
| Bst4CI | ACNGT | 4 cut(s) | 1118, 2251, 2908, 2935 |
| Bst6I | CTCTTC | 8 cut(s) | 54, 912, 1101, 1200, 2262, 2520, 2769, 3406 |
| BstAFI | CTTAAG | 1 cut(s) | 1400 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 683, 1048, 3377 |
| BstC8I | GCNNGC | 3 cut(s) | 651, 763, 2319 |
| BstDSI | CCRYGG | 1 cut(s) | 2250 |
| BstFNI | CGCG | 2 cut(s) | 1033, 3155 |
| BstH2I | RGCGCY | 2 cut(s) | 2377, 3919 |
| BstHHI | GCGC | 2 cut(s) | 2376, 3918 |
| BstNI | CCWGG | 7 cut(s) | 204, 213, 381, 433, 908, 1717, 2825 |
| BstNSI | RCATGY | 4 cut(s) | 11, 560, 1436, 1895 |
| BstSCI | CCNGG | 7 cut(s) | 202, 211, 379, 431, 906, 1715, 2823 |
| BstSFI | CTRYAG | 8 cut(s) | 240, 857, 1008, 1260, 1422, 2993, 3098, 3440 |
| BstSLI | GKGCMC | 1 cut(s) | 1737 |
| BstUI | CGCG | 2 cut(s) | 1033, 3155 |
| BstV1I | GCAGC | 7 cut(s) | 226, 267, 689, 1026, 1096, 1099, 1887 |
| BstV2I | GAAGAC | 2 cut(s) | 349, 2906 |
| BstX2I | RGATCY | 9 cut(s) | 134, 164, 289, 1300, 1636, 2416, 2692, 3479, 3538 |
| BstYI | RGATCY | 9 cut(s) | 134, 164, 289, 1300, 1636, 2416, 2692, 3479, 3538 |
| BsuI | GTATCC | 1 cut(s) | 3082 |
| BsuRI | GGCC | 1 cut(s) | 2790 |
| BtgI | CCRYGG | 1 cut(s) | 2250 |
| BtsI | GCAGTG | 2 cut(s) | 3185, 3562 |
| BtsIMutI | CAGTG | 7 cut(s) | 750, 1455, 2192, 2904, 3185, 3562, 3567 |
| BveI | ACCTGC | 2 cut(s) | 233, 864 |
| Cac8I | GCNNGC | 3 cut(s) | 651, 763, 2319 |
| CaiI | CAGNNNCTG | 4 cut(s) | 913, 1090, 1102, 2939 |
| CciI | TCATGA | 1 cut(s) | 1576 |
| CfoI | GCGC | 2 cut(s) | 2376, 3918 |
| Cfr13I | GGNCC | 2 cut(s) | 853, 1272 |
| CseI | GACGC | 2 cut(s) | 1022, 3161 |
| Csp6I | GTAC | 4 cut(s) | 144, 1185, 1595, 2337 |
| CviQI | GTAC | 4 cut(s) | 144, 1185, 1595, 2337 |
| DraI | TTTAAA | 1 cut(s) | 1608 |
| DraIII | CACNNNGTG | 2 cut(s) | 1836, 2486 |
| DriI | GACNNNNNGTC | 1 cut(s) | 78 |
| Eam1104I | CTCTTC | 8 cut(s) | 54, 912, 1101, 1200, 2262, 2520, 2769, 3406 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 78 |
| EarI | CTCTTC | 8 cut(s) | 54, 912, 1101, 1200, 2262, 2520, 2769, 3406 |
| Ecl136II | GAGCTC | 2 cut(s) | 1825, 3397 |
| Eco147I | AGGCCT | 1 cut(s) | 2790 |
| Eco24I | GRGCYC | 3 cut(s) | 1723, 1827, 3399 |
| Eco31I | GGTCTC | 1 cut(s) | 2249 |
| Eco47I | GGWCC | 2 cut(s) | 853, 1272 |
| Eco47III | AGCGCT | 2 cut(s) | 2375, 3917 |
| Eco53kI | GAGCTC | 2 cut(s) | 1825, 3397 |
| Eco57I | CTGAAG | 9 cut(s) | 842, 1911, 2564, 2631, 2681, 3002, 3242, 3407, 3591 |
| Eco88I | CYCGRG | 3 cut(s) | 2199, 3245, 3449 |
| EcoICRI | GAGCTC | 2 cut(s) | 1825, 3397 |
| EcoRI | GAATTC | 3 cut(s) | 463, 2077, 3235 |
| EcoRII | CCWGG | 7 cut(s) | 202, 211, 379, 431, 906, 1715, 2823 |
| EcoT38I | GRGCYC | 3 cut(s) | 1723, 1827, 3399 |
| FaqI | GGGAC | 2 cut(s) | 1443, 3472 |
| FauNDI | CATATG | 1 cut(s) | 682 |
| FbaI | TGATCA | 2 cut(s) | 634, 1305 |
| Fnu4HI | GCNGC | 7 cut(s) | 240, 256, 678, 1040, 1085, 1088, 1876 |
| FriOI | GRGCYC | 3 cut(s) | 1723, 1827, 3399 |
| Fsp4HI | GCNGC | 7 cut(s) | 240, 256, 678, 1040, 1085, 1088, 1876 |
| GlaI | GCGC | 2 cut(s) | 2375, 3917 |
| GluI | GCNGC | 7 cut(s) | 240, 256, 678, 1040, 1085, 1088, 1876 |
| GsuI | CTGGAG | 4 cut(s) | 225, 415, 890, 1703 |
| HaeII | RGCGCY | 2 cut(s) | 2377, 3919 |
| HaeIII | GGCC | 1 cut(s) | 2790 |
| HapII | CCGG | 1 cut(s) | 138 |
| HgaI | GACGC | 2 cut(s) | 1022, 3161 |
| HhaI | GCGC | 2 cut(s) | 2376, 3918 |
| Hin6I | GCGC | 2 cut(s) | 2374, 3916 |
| HinP1I | GCGC | 2 cut(s) | 2374, 3916 |
| HincII | GTYRAC | 2 cut(s) | 2358, 3712 |
| HindII | GTYRAC | 2 cut(s) | 2358, 3712 |
| HindIII | AAGCTT | 3 cut(s) | 1397, 3056, 3161 |
| HpaII | CCGG | 1 cut(s) | 138 |
| HphI | GGTGA | 6 cut(s) | 332, 480, 1304, 1819, 2593, 3353 |
| Hpy166II | GTNNAC | 6 cut(s) | 118, 248, 1735, 2358, 2911, 3712 |
| Hpy8I | GTNNAC | 6 cut(s) | 118, 248, 1735, 2358, 2911, 3712 |
| Hpy99I | CGWCG | 1 cut(s) | 3624 |
| HpyCH4III | ACNGT | 4 cut(s) | 1118, 2251, 2908, 2935 |
| HpyCH4IV | ACGT | 2 cut(s) | 691, 2005 |
| HpySE526I | ACGT | 2 cut(s) | 691, 2005 |
| HspAI | GCGC | 2 cut(s) | 2374, 3916 |
| Ksp22I | TGATCA | 2 cut(s) | 634, 1305 |
| LguI | GCTCTTC | 1 cut(s) | 3406 |
| LmnI | GCTCC | 7 cut(s) | 550, 667, 870, 910, 1342, 2106, 2299 |
| Lsp1109I | GCAGC | 7 cut(s) | 226, 267, 689, 1026, 1096, 1099, 1887 |
| LweI | GCATC | 6 cut(s) | 2467, 2675, 3367, 3676, 3723, 3811 |
| MaeII | ACGT | 2 cut(s) | 691, 2005 |
| MaeIII | GTNAC | 5 cut(s) | 538, 1498, 1630, 2238, 3565 |
| MfeI | CAATTG | 1 cut(s) | 1217 |
| MflI | RGATCY | 9 cut(s) | 134, 164, 289, 1300, 1636, 2416, 2692, 3479, 3538 |
| MhlI | GDGCHC | 5 cut(s) | 1723, 1737, 1827, 1872, 3399 |
| MluI | ACGCGT | 1 cut(s) | 1031 |
| MlyI | GAGTC | 7 cut(s) | 71, 166, 272, 1247, 1499, 2614, 3707 |
| MmeI | TCCRAC | 4 cut(s) | 2388, 2524, 2847, 3685 |
| MroXI | GAANNNNTTC | 3 cut(s) | 454, 1156, 3239 |
| MslI | CAYNNNNRTG | 4 cut(s) | 1280, 3621, 3813, 3819 |
| MspA1I | CMGCKG | 3 cut(s) | 1039, 1090, 2959 |
| MspCI | CTTAAG | 1 cut(s) | 1400 |
| MspI | CCGG | 1 cut(s) | 138 |
| MspR9I | CCNGG | 7 cut(s) | 204, 213, 381, 433, 908, 1717, 2825 |
| MunI | CAATTG | 1 cut(s) | 1217 |
| Mva1269I | GAATGC | 1 cut(s) | 589 |
| MvaI | CCWGG | 7 cut(s) | 204, 213, 381, 433, 908, 1717, 2825 |
| MvnI | CGCG | 2 cut(s) | 1033, 3155 |
| NdeI | CATATG | 1 cut(s) | 682 |
| NlaIV | GGNNCC | 5 cut(s) | 136, 277, 291, 329, 872 |
| NmuCI | GTSAC | 2 cut(s) | 1498, 3565 |
| NspI | RCATGY | 4 cut(s) | 11, 560, 1436, 1895 |
| PaeR7I | CTCGAG | 3 cut(s) | 2199, 3245, 3449 |
| PagI | TCATGA | 1 cut(s) | 1576 |
| PceI | AGGCCT | 1 cut(s) | 2790 |
| PciSI | GCTCTTC | 1 cut(s) | 3406 |
| PctI | GAATGC | 1 cut(s) | 589 |
| PdmI | GAANNNNTTC | 3 cut(s) | 454, 1156, 3239 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 913 |
| PfoI | TCCNGGA | 4 cut(s) | 202, 431, 906, 2823 |
| PkrI | GCNGC | 7 cut(s) | 241, 257, 679, 1041, 1086, 1089, 1877 |
| PleI | GAGTC | 7 cut(s) | 70, 165, 271, 1246, 1498, 2614, 3707 |
| PpsI | GAGTC | 7 cut(s) | 70, 165, 271, 1246, 1498, 2614, 3707 |
| PsiI | TTATAA | 1 cut(s) | 3780 |
| Psp124BI | GAGCTC | 2 cut(s) | 1827, 3399 |
| Psp6I | CCWGG | 7 cut(s) | 202, 211, 379, 431, 906, 1715, 2823 |
| PspGI | CCWGG | 7 cut(s) | 202, 211, 379, 431, 906, 1715, 2823 |
| PspN4I | GGNNCC | 5 cut(s) | 136, 277, 291, 329, 872 |
| PspPI | GGNCC | 2 cut(s) | 853, 1272 |
| PspXI | VCTCGAGB | 1 cut(s) | 3449 |
| PstI | CTGCAG | 5 cut(s) | 244, 861, 1264, 1426, 2997 |
| PstNI | CAGNNNCTG | 4 cut(s) | 913, 1090, 1102, 2939 |
| PsuI | RGATCY | 9 cut(s) | 134, 164, 289, 1300, 1636, 2416, 2692, 3479, 3538 |
| PvuII | CAGCTG | 3 cut(s) | 1039, 1090, 2959 |
| RsaI | GTAC | 4 cut(s) | 145, 1186, 1596, 2338 |
| RsaNI | GTAC | 4 cut(s) | 144, 1185, 1595, 2337 |
| RseI | CAYNNNNRTG | 4 cut(s) | 1280, 3621, 3813, 3819 |
| SacI | GAGCTC | 2 cut(s) | 1827, 3399 |
| SapI | GCTCTTC | 1 cut(s) | 3406 |
| SatI | GCNGC | 7 cut(s) | 240, 256, 678, 1040, 1085, 1088, 1876 |
| Sau96I | GGNCC | 2 cut(s) | 853, 1272 |
| ScaI | AGTACT | 1 cut(s) | 1596 |
| SchI | GAGTC | 7 cut(s) | 71, 166, 272, 1247, 1499, 2614, 3707 |
| ScrFI | CCNGG | 7 cut(s) | 204, 213, 381, 433, 908, 1717, 2825 |
| SduI | GDGCHC | 5 cut(s) | 1723, 1737, 1827, 1872, 3399 |
| SfaNI | GCATC | 6 cut(s) | 2467, 2675, 3367, 3676, 3723, 3811 |
| SfcI | CTRYAG | 8 cut(s) | 240, 857, 1008, 1260, 1422, 2993, 3098, 3440 |
| Sfr274I | CTCGAG | 3 cut(s) | 2199, 3245, 3449 |
| SinI | GGWCC | 2 cut(s) | 853, 1272 |
| SlaI | CTCGAG | 3 cut(s) | 2199, 3245, 3449 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 1280, 3621, 3813, 3819 |
| SpeI | ACTAGT | 4 cut(s) | 368, 503, 3643, 3970 |
| SseBI | AGGCCT | 1 cut(s) | 2790 |
| SsiI | CCGC | 3 cut(s) | 531, 3331, 3818 |
| SspI | AATATT | 3 cut(s) | 886, 1191, 2755 |
| SstI | GAGCTC | 2 cut(s) | 1827, 3399 |
| StuI | AGGCCT | 1 cut(s) | 2790 |
| StyD4I | CCNGG | 7 cut(s) | 202, 211, 379, 431, 906, 1715, 2823 |
| TaaI | ACNGT | 4 cut(s) | 1118, 2251, 2908, 2935 |
| TaiI | ACGT | 2 cut(s) | 694, 2008 |
| TaqI | TCGA | 8 cut(s) | 1194, 1620, 1782, 2200, 2390, 3246, 3450, 3875 |
| TatI | WGTACW | 3 cut(s) | 143, 1184, 1594 |
| TscAI | CASTG | 7 cut(s) | 750, 1462, 2192, 2911, 3192, 3562, 3574 |
| TseFI | GTSAC | 2 cut(s) | 1498, 3565 |
| TseI | GCWGC | 7 cut(s) | 239, 255, 677, 1039, 1084, 1087, 1875 |
| Tsp45I | GTSAC | 2 cut(s) | 1498, 3565 |
| TspGWI | ACGGA | 5 cut(s) | 604, 889, 1385, 1522, 3187 |
| TspRI | CASTG | 7 cut(s) | 750, 1462, 2192, 2911, 3192, 3562, 3574 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 913 |
| Vha464I | CTTAAG | 1 cut(s) | 1400 |
| VneI | GTGCAC | 1 cut(s) | 1733 |
| VpaK11BI | GGWCC | 2 cut(s) | 853, 1272 |
| XbaI | TCTAGA | 3 cut(s) | 2017, 2723, 3886 |
| XceI | RCATGY | 4 cut(s) | 11, 560, 1436, 1895 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 847, 1462 |
| XhoI | CTCGAG | 3 cut(s) | 2199, 3245, 3449 |
| XmnI | GAANNNNTTC | 3 cut(s) | 454, 1156, 3239 |
| ZrmI | AGTACT | 1 cut(s) | 1596 |