MD14G1227800.v1.1

receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr14
Physical Location & Seq
Reverse (-)
30879097 .. 30882754
3658 bp
Loading structure...
UTR
Exon/CDS
Intron
MD14G1227800.v1.1.491

Sequence Viewer

Length: 1182 bp
ATGGGGTGCTGCATCTGCTCCGGTTTCTGGGCCTGCTTGGATAAGCTGAAAGCCGGCGGACGGTCCGCCGCAGCTGGAGCCGACGACGCCGAGGACGGAATCGAGTCCTTCGATCTCTTCTTCGACCTCCACGCGCTGCAAATCGCCACCAGCTTCTTCTCCGACCTCAATAAACTTGGGCACGGAGGCTTTGGCCCCGTTTACAAGGGTTTGATGCCAAATGGTCAAGAAATAGCTGTAAAGAAGCTGTCTGTAGATTCAAGGCAGGGAGCTAGAGAATTCACCAACGAGGTGAAACTGTTACTGAGAGTTCAGCACAAGAATTTGGTCATGTTATTGGGGTGTTGTGTAGAAGGGCCTGAGAAGATGCTGGTTTACGAGTATCTCCCAAACAAAAGCCTCGATTACATTCTTTTCGATAAACAGAAATCTGGAAGCTTGGATTGGACGACAAGGTTTCGGGTGATTATGGGAGTGGCAAGAGGTCTTCTTTACCTTCATGAAGAGGCCCCGGAAAGGATCATTCATAGGGACATCAAAGCTAGTAATATATTACTAGATGAGAAGCTGAATCCGAAAATCTCGGATTTTGGCTTGGCAAGACTCTTTCCTGGGGAGGACACTCATCTCAATACATTTCGGATTTCTGGTACTCATGGTTATATGGCCCCTGAATATGCAATGCATGGATATTTATCGGTGAAGACAGATGTTTTCAGTTACGGAGTCTTGGTGTTAGAGATTGTGAGCGGGAGAAAGAATCATGATGGGCAGCTCGAAAGAGAAAAAGCCGATCTCTTGAGCTATACATGGATGCTGCATCAAAGAGGGAAGGTATTGGACTTAGTTGACCCAACCCTAGCCAAGTGCAATCCCGACGAGGCAGCAATGTGCATTCAGCTAGGACTCTTATGCTGTCAAGCAAGCGTTGCAGAACGGCCAGACATGAACTCCATCCATCTCATGTTTTCGAGCGATTCATTTACCTTGCCGAGGCCAGGTAAACCTGGACTTCAGGGCCGTGGAGGACGTTGGACGACCACTTCTACTTCCGCTTTCACCAACAATACTAATGCCAGTAGCGGATACACAGGCGCCACCAAGGCCTCCGGCGGGAGCAGTTTTATTGAGGAATATTCTAGAAATTCGATGTCTCATTCTTCCATGGACGAAGGTAGATGA

Protein Analysis

394

Amino Acids

43.31

Weight (kDa)

6.32

Isoelectric Point (pI)

33.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 54 - 263 9.2e-44 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 57 - 320 9.8e-46 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1094
AccBSI CCGCTC 1 cut(s) 750
AccII CGCG 1 cut(s) 134
AciI CCGC 7 cut(s) 57, 66, 69, 750, 1053, 1083, 1113
AclWI GGATC 1 cut(s) 527
AcoI YGGCCR 1 cut(s) 938
AcsI RAATTY 3 cut(s) 278, 322, 1144
AcuI CTGAAG 1 cut(s) 998
AcyI GRCGYC 2 cut(s) 87, 1095
AfaI GTAC 1 cut(s) 652
AfiI CCNNNNNNNGG 6 cut(s) 27, 60, 516, 993, 998, 1113
AgsI TTSAA 1 cut(s) 261
AjnI CCWGG 3 cut(s) 610, 997, 1006
AjuI GAANNNNNNNTTGG 2 cut(s) 427, 459
Alw26I GTCTC 1 cut(s) 1158
AlwI GGATC 1 cut(s) 527
AoxI GGCC 9 cut(s) 30, 193, 356, 507, 666, 938, 995, 1018, 1104
ApeKI GCWGC 6 cut(s) 9, 71, 136, 772, 817, 884
ApoI RAATTY 3 cut(s) 278, 322, 1144
AspLEI GCGC 2 cut(s) 136, 1097
AspS9I GGNCC 7 cut(s) 30, 63, 194, 356, 508, 667, 1018
AsuC2I CCSGG 1 cut(s) 512
AsuHPI GGTGA 5 cut(s) 274, 304, 475, 712, 1051
AvaII GGWCC 1 cut(s) 63
BaeGI GKGCMC 1 cut(s) 183
BanI GGYRCC 1 cut(s) 1094
BbsI GAAGAC 2 cut(s) 479, 710
BbvI GCAGC 5 cut(s) 83, 123, 784, 804, 896
BccI CCATC 3 cut(s) 761, 962, 966
BceAI ACGGC 2 cut(s) 953, 1005
BciT130I CCWGG 3 cut(s) 612, 999, 1008
BciVI GTATCC 1 cut(s) 1079
BcnI CCSGG 1 cut(s) 512
BcoDI GTCTC 1 cut(s) 1158
BfaI CTAG 6 cut(s) 273, 543, 557, 860, 902, 1140
BfmI CTRYAG 1 cut(s) 252
BfoI RGCGCY 1 cut(s) 1098
BfuI GTATCC 1 cut(s) 1079
BglI GCCNNNNNGGC 1 cut(s) 1103
BisI GCNGC 7 cut(s) 10, 69, 72, 137, 773, 818, 885
BlsI GCNGC 7 cut(s) 11, 70, 73, 138, 774, 819, 886
Bme1390I CCNGG 4 cut(s) 512, 612, 999, 1008
Bme18I GGWCC 1 cut(s) 63
BmgT120I GGNCC 7 cut(s) 30, 63, 194, 356, 508, 667, 1018
BmiI GGNNCC 5 cut(s) 79, 196, 510, 669, 1096
BmrFI CCNGG 4 cut(s) 512, 612, 999, 1008
BmsI GCATC 5 cut(s) 21, 204, 357, 804, 829
BpiI GAAGAC 2 cut(s) 479, 710
BpmI CTGGAG 1 cut(s) 96
BpuEI CTTGAG 1 cut(s) 820
BpuMI CCSGG 1 cut(s) 512
BsaBI GATNNNNATC 1 cut(s) 694
BsaHI GRCGYC 2 cut(s) 87, 1095
BsaJI CCNNGG 7 cut(s) 90, 510, 611, 992, 1021, 1101, 1164
BsaWI WCCGGW 1 cut(s) 20
BsaXI ACNNNNNCTCC 4 cut(s) 717, 747, 935, 965
Bsc4I CCNNNNNNNGG 6 cut(s) 27, 60, 516, 993, 998, 1113
Bse118I RCCGGY 1 cut(s) 53
Bse1I ACTGG 1 cut(s) 1077
Bse3DI GCAATG 2 cut(s) 687, 894
Bse8I GATNNNNATC 1 cut(s) 694
BseBI CCWGG 3 cut(s) 612, 999, 1008
BseDI CCNNGG 7 cut(s) 90, 510, 611, 992, 1021, 1101, 1164
BseGI GGATG 2 cut(s) 819, 954
BseJI GATNNNNATC 1 cut(s) 694
BseLI CCNNNNNNNGG 6 cut(s) 27, 60, 516, 993, 998, 1113
BseMI GCAATG 2 cut(s) 687, 894
BseMII CTCAG 2 cut(s) 296, 351
BseNI ACTGG 1 cut(s) 1077
BseSI GKGCMC 1 cut(s) 183
BseXI GCAGC 5 cut(s) 83, 123, 784, 804, 896
Bsh1236I CGCG 1 cut(s) 134
BshFI GGCC 9 cut(s) 32, 195, 358, 509, 668, 940, 997, 1020, 1106
BshNI GGYRCC 1 cut(s) 1094
BsiSI CCGG 4 cut(s) 21, 54, 512, 1110
BslFI GGGAC 1 cut(s) 545
BslI CCNNNNNNNGG 6 cut(s) 27, 60, 516, 993, 998, 1113
BsmAI GTCTC 1 cut(s) 1158
BsmFI GGGAC 1 cut(s) 545
BsmI GAATGC 1 cut(s) 894
BsnI GGCC 9 cut(s) 32, 195, 358, 509, 668, 940, 997, 1020, 1106
Bsp1286I GDGCHC 1 cut(s) 183
Bsp143I GATC 3 cut(s) 112, 519, 793
Bsp19I CCATGG 1 cut(s) 1164
BspACI CCGC 7 cut(s) 57, 66, 69, 750, 1053, 1083, 1113
BspANI GGCC 9 cut(s) 32, 195, 358, 509, 668, 940, 997, 1020, 1106
BspCNI CTCAG 2 cut(s) 297, 352
BspFNI CGCG 1 cut(s) 134
BspHI TCATGA 2 cut(s) 499, 763
BspLI GGNNCC 5 cut(s) 79, 196, 510, 669, 1096
BspPI GGATC 1 cut(s) 527
BspT107I GGYRCC 1 cut(s) 1094
BsrBI CCGCTC 1 cut(s) 750
BsrDI GCAATG 2 cut(s) 687, 894
BsrFI RCCGGY 1 cut(s) 53
BsrI ACTGG 1 cut(s) 1077
BssAI RCCGGY 1 cut(s) 53
BssECI CCNNGG 7 cut(s) 90, 510, 611, 992, 1021, 1101, 1164
BssMI GATC 3 cut(s) 112, 519, 793
BssNI GRCGYC 2 cut(s) 87, 1095
BssT1I CCWWGG 2 cut(s) 1101, 1164
Bst2UI CCWGG 3 cut(s) 612, 999, 1008
Bst4CI ACNGT 2 cut(s) 63, 300
Bst6I CTCTTC 2 cut(s) 122, 498
BstACI GRCGYC 2 cut(s) 87, 1095
BstAPI GCANNNNNTGC 1 cut(s) 929
BstC8I GCNNGC 3 cut(s) 34, 55, 925
BstDEI CTNAG 3 cut(s) 305, 360, 844
BstDSI CCRYGG 2 cut(s) 1021, 1164
BstENI CCTNNNNNAGG 1 cut(s) 991
BstF5I GGATG 2 cut(s) 819, 954
BstFNI CGCG 1 cut(s) 134
BstH2I RGCGCY 1 cut(s) 1098
BstHHI GCGC 2 cut(s) 136, 1097
BstKTI GATC 3 cut(s) 115, 522, 796
BstMAI GTCTC 1 cut(s) 1158
BstMBI GATC 3 cut(s) 112, 519, 793
BstMWI GCNNNNNNNGC 5 cut(s) 15, 77, 86, 929, 1103
BstNI CCWGG 3 cut(s) 612, 999, 1008
BstSCI CCNGG 4 cut(s) 510, 610, 997, 1006
BstSFI CTRYAG 1 cut(s) 252
BstSLI GKGCMC 1 cut(s) 183
BstUI CGCG 1 cut(s) 134
BstV1I GCAGC 5 cut(s) 83, 123, 784, 804, 896
BstV2I GAAGAC 2 cut(s) 479, 710
BsuI GTATCC 1 cut(s) 1079
BsuRI GGCC 9 cut(s) 32, 195, 358, 509, 668, 940, 997, 1020, 1106
BtgI CCRYGG 2 cut(s) 1021, 1164
BtsCI GGATG 2 cut(s) 819, 954
Cac8I GCNNGC 3 cut(s) 34, 55, 925
CciI TCATGA 2 cut(s) 499, 763
CfoI GCGC 2 cut(s) 136, 1097
Cfr10I RCCGGY 1 cut(s) 53
Cfr13I GGNCC 7 cut(s) 30, 63, 194, 356, 508, 667, 1018
CpoI CGGWCCG 1 cut(s) 63
CseI GACGC 1 cut(s) 95
Csp6I GTAC 1 cut(s) 651
CspI CGGWCCG 1 cut(s) 63
CviAII CATG 9 cut(s) 331, 500, 656, 686, 764, 810, 946, 964, 1165
CviQI GTAC 1 cut(s) 651
DdeI CTNAG 3 cut(s) 305, 360, 844
DinI GGCGCC 1 cut(s) 1096
DpnI GATC 3 cut(s) 114, 521, 795
DpnII GATC 3 cut(s) 112, 519, 793
EaeI YGGCCR 1 cut(s) 938
Eam1104I CTCTTC 2 cut(s) 122, 498
EarI CTCTTC 2 cut(s) 122, 498
EciI GGCGGA 2 cut(s) 55, 72
Eco130I CCWWGG 2 cut(s) 1101, 1164
Eco147I AGGCCT 1 cut(s) 1106
Eco47I GGWCC 1 cut(s) 63
Eco57I CTGAAG 1 cut(s) 998
EcoNI CCTNNNNNAGG 1 cut(s) 991
EcoO109I RGGNCCY 2 cut(s) 356, 508
EcoRI GAATTC 1 cut(s) 278
EcoRII CCWGG 3 cut(s) 610, 997, 1006
EcoT14I CCWWGG 2 cut(s) 1101, 1164
EcoT22I ATGCAT 1 cut(s) 687
EgeI GGCGCC 1 cut(s) 1096
EheI GGCGCC 1 cut(s) 1096
ErhI CCWWGG 2 cut(s) 1101, 1164
FaeI CATG 9 cut(s) 334, 503, 659, 689, 767, 813, 949, 967, 1168
FaqI GGGAC 1 cut(s) 545
FatI CATG 9 cut(s) 330, 499, 655, 685, 763, 809, 945, 963, 1164
FauI CCCGC 2 cut(s) 743, 1106
Fnu4HI GCNGC 7 cut(s) 10, 69, 72, 137, 773, 818, 885
FokI GGATG 2 cut(s) 826, 941
Fsp4HI GCNGC 7 cut(s) 10, 69, 72, 137, 773, 818, 885
FspBI CTAG 6 cut(s) 273, 543, 557, 860, 902, 1140
GlaI GCGC 2 cut(s) 135, 1096
GluI GCNGC 7 cut(s) 10, 69, 72, 137, 773, 818, 885
GsuI CTGGAG 1 cut(s) 96
HaeII RGCGCY 1 cut(s) 1098
HaeIII GGCC 9 cut(s) 32, 195, 358, 509, 668, 940, 997, 1020, 1106
HapII CCGG 4 cut(s) 21, 54, 512, 1110
HgaI GACGC 1 cut(s) 95
HhaI GCGC 2 cut(s) 136, 1097
Hin1I GRCGYC 2 cut(s) 87, 1095
Hin1II CATG 9 cut(s) 334, 503, 659, 689, 767, 813, 949, 967, 1168
Hin6I GCGC 2 cut(s) 134, 1095
HinP1I GCGC 2 cut(s) 134, 1095
HincII GTYRAC 1 cut(s) 850
HindII GTYRAC 1 cut(s) 850
HindIII AAGCTT 1 cut(s) 436
HinfI GANTC 9 cut(s) 99, 104, 257, 571, 603, 726, 760, 906, 977
HpaII CCGG 4 cut(s) 21, 54, 512, 1110
HphI GGTGA 5 cut(s) 274, 304, 475, 712, 1051
Hpy166II GTNNAC 4 cut(s) 202, 376, 850, 1004
Hpy188I TCNGA 4 cut(s) 163, 576, 586, 642
Hpy188III TCNNGA 7 cut(s) 227, 432, 500, 764, 799, 875, 1140
Hpy8I GTNNAC 4 cut(s) 202, 376, 850, 1004
Hpy99I CGWCG 3 cut(s) 86, 89, 881
HpyAV CCTTC 5 cut(s) 118, 347, 506, 826, 1166
HpyCH4III ACNGT 2 cut(s) 63, 300
HpyCH4IV ACGT 1 cut(s) 1030
HpyCH4V TGCA 8 cut(s) 12, 139, 680, 685, 820, 870, 894, 932
HpyF10VI GCNNNNNNNGC 5 cut(s) 15, 77, 86, 929, 1103
HpyF3I CTNAG 3 cut(s) 305, 360, 844
HpySE526I ACGT 1 cut(s) 1030
Hsp92I GRCGYC 2 cut(s) 87, 1095
Hsp92II CATG 9 cut(s) 334, 503, 659, 689, 767, 813, 949, 967, 1168
HspAI GCGC 2 cut(s) 134, 1095
KasI GGCGCC 1 cut(s) 1094
KroI GCCGGC 1 cut(s) 53
KroNI GCCGGC 1 cut(s) 55
Kzo9I GATC 3 cut(s) 112, 519, 793
LmnI GCTCC 4 cut(s) 23, 77, 269, 1116
Lsp1109I GCAGC 5 cut(s) 83, 123, 784, 804, 896
LweI GCATC 5 cut(s) 21, 204, 357, 804, 829
MaeI CTAG 6 cut(s) 273, 543, 557, 860, 902, 1140
MaeII ACGT 1 cut(s) 1030
MaeIII GTNAC 2 cut(s) 300, 719
MalI GATC 3 cut(s) 114, 521, 795
MbiI CCGCTC 1 cut(s) 750
MboI GATC 3 cut(s) 112, 519, 793
MboII GAAGA 8 cut(s) 109, 112, 148, 376, 479, 515, 715, 1152
MhlI GDGCHC 1 cut(s) 183
MluCI AATT 3 cut(s) 278, 322, 1144
Mly113I GGCGCC 1 cut(s) 1095
MlyI GAGTC 4 cut(s) 113, 597, 735, 900
MmeI TCCRAC 2 cut(s) 186, 1013
Mph1103I ATGCAT 1 cut(s) 687
MroNI GCCGGC 1 cut(s) 53
MspA1I CMGCKG 1 cut(s) 74
MspI CCGG 4 cut(s) 21, 54, 512, 1110
MspR9I CCNGG 4 cut(s) 512, 612, 999, 1008
Mva1269I GAATGC 1 cut(s) 894
MvaI CCWGG 3 cut(s) 612, 999, 1008
MvnI CGCG 1 cut(s) 134
MwoI GCNNNNNNNGC 5 cut(s) 15, 77, 86, 929, 1103
NaeI GCCGGC 1 cut(s) 55
NarI GGCGCC 1 cut(s) 1095
NciI CCSGG 1 cut(s) 512
NcoI CCATGG 1 cut(s) 1164
NdeII GATC 3 cut(s) 112, 519, 793
NgoMIV GCCGGC 1 cut(s) 53
NlaIII CATG 9 cut(s) 334, 503, 659, 689, 767, 813, 949, 967, 1168
NlaIV GGNNCC 5 cut(s) 79, 196, 510, 669, 1096
NmeAIII GCCGAG 2 cut(s) 115, 1017
NsiI ATGCAT 1 cut(s) 687
PagI TCATGA 2 cut(s) 499, 763
PceI AGGCCT 1 cut(s) 1106
PcsI WCGNNNNNNNCGW 1 cut(s) 108
PctI GAATGC 1 cut(s) 894
PdiI GCCGGC 1 cut(s) 55
PfeI GAWTC 5 cut(s) 99, 257, 571, 760, 977
PkrI GCNGC 7 cut(s) 11, 70, 73, 138, 774, 819, 886
PleI GAGTC 4 cut(s) 112, 597, 734, 900
PluTI GGCGCC 1 cut(s) 1098
PpsI GAGTC 4 cut(s) 112, 597, 734, 900
Psp6I CCWGG 3 cut(s) 610, 997, 1006
PspGI CCWGG 3 cut(s) 610, 997, 1006
PspN4I GGNNCC 5 cut(s) 79, 196, 510, 669, 1096
PspPI GGNCC 7 cut(s) 30, 63, 194, 356, 508, 667, 1018
PvuII CAGCTG 1 cut(s) 74
RsaI GTAC 1 cut(s) 652
RsaNI GTAC 1 cut(s) 651
Rsr2I CGGWCCG 1 cut(s) 63
RsrII CGGWCCG 1 cut(s) 63
SatI GCNGC 7 cut(s) 10, 69, 72, 137, 773, 818, 885
Sau3AI GATC 3 cut(s) 112, 519, 793
Sau96I GGNCC 7 cut(s) 30, 63, 194, 356, 508, 667, 1018
SchI GAGTC 4 cut(s) 113, 597, 735, 900
ScrFI CCNGG 4 cut(s) 512, 612, 999, 1008
SduI GDGCHC 1 cut(s) 183
SfaNI GCATC 5 cut(s) 21, 204, 357, 804, 829
SfcI CTRYAG 1 cut(s) 252
SfoI GGCGCC 1 cut(s) 1096
SinI GGWCC 1 cut(s) 63
SmlI CTYRAG 1 cut(s) 799
SmoI CTYRAG 1 cut(s) 799
Sse9I AATT 3 cut(s) 278, 322, 1144
SseBI AGGCCT 1 cut(s) 1106
SsiI CCGC 7 cut(s) 57, 66, 69, 750, 1053, 1083, 1113
SspDI GGCGCC 1 cut(s) 1094
SspI AATATT 1 cut(s) 1136
SspMI CTAG 6 cut(s) 273, 543, 557, 860, 902, 1140
StuI AGGCCT 1 cut(s) 1106
StyD4I CCNGG 4 cut(s) 510, 610, 997, 1006
StyI CCWWGG 2 cut(s) 1101, 1164
TaaI ACNGT 2 cut(s) 63, 300
TaiI ACGT 1 cut(s) 1033
TaqI TCGA 8 cut(s) 102, 111, 123, 402, 417, 777, 971, 1148
TasI AATT 3 cut(s) 278, 322, 1144
TauI GCSGC 1 cut(s) 71
TfiI GAWTC 5 cut(s) 99, 257, 571, 760, 977
TseI GCWGC 6 cut(s) 9, 71, 136, 772, 817, 884
TspDTI ATGAA 5 cut(s) 488, 515, 516, 962, 969
TspGWI ACGGA 3 cut(s) 111, 198, 738
VpaK11BI GGWCC 1 cut(s) 63
XagI CCTNNNNNAGG 1 cut(s) 991
XapI RAATTY 3 cut(s) 278, 322, 1144
XbaI TCTAGA 1 cut(s) 1139
XspI CTAG 6 cut(s) 273, 543, 557, 860, 902, 1140
Zsp2I ATGCAT 1 cut(s) 687
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.