Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0010567

Physical Location & Seq

Genomic Coordinates Reverse (-)

17292529 .. 17294285

Gene Structure 1757 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G222800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 813 bp

ATGCTGGTTTATGAGTATCTTCCGAACAAAAGCCTTGATTACTTTATTTTTGATAAACAGAAATCTGGAACCCTGGATTGGACGACGAGGTTTCGGATAATTATGGGTGTGGCAAGAGGTCTTCGTTACCTTCATGAAGAGGCCCCAGAAAGGATCATTCATAGGGACATCAAAGCTAGTAATATATTACTGGATGAGAAACTCCATCCAAAAATCTCGGATTTTGGCTTGGCAAGACTCTTTCCTGGGGAGGACACTCATGTAAATACATTTAGGATTTCTGGTACTCATGGTTATATGGCCCCTGAATATGCAATGCATGGGTATTTGTCCGTGAAGACAGATGTTTTCAGTTATGGAGTCTTGGTGTTGGAGATTGTCAGCGGGAGAAAGAACCATGATGGGCGGCTTGAAAGAGAAAAGGCAGACCTCTTGAGCTATACATGGAAGCTGTATCAAGGAGGGAAGGCACTGGACCTAGTTGACCCAACCCTGGCCAGGTGCAATCCTGATGAGGCAGCAATGTGCATTCAACTAGGACTTCTATGTTGTCAAGCAAGCGTTGCAGACCGGCCTGACATGAACTCTATCCATCTCATGTTTTCGAGTGATTCATTTACCTTGCCAAGGCCTGGTAAACCTGGACTTCAGGGCCGTAGAGGACGTTGGACAACCACCTCTACTTCAGCTTTTACCAATACTAATGCTAGTAGTGGATACACAGGTGTTACCAAAGCCTCTGCGGGGAGTAGTTTTGTTGAGGAGTATTCTAGAAATTCAATTTCTCATTCTTCGATTGATGAAGGTAGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009617 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0042742 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050896 GO:0051704 GO:0051707 GO:0071704 GO:0071944 GO:0098542 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

Pkinase_Tyr

Protein Analysis

271

Amino Acids

30.23

Weight (kDa)

7.72

Isoelectric Point (pI)

26.84

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010567)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g11890 FvH4_5g11890 FvH4_5g11890 FvH4_5g11890 FvH4_5g11890
malus_domestica	MD06G1217600.v1.1 MD14G1227800.v1.1
prunus_persica	Prupe.5G222800_v2.0.a1
pyrus_communis	pycom14g18920
rosa_chinensis	RchiOBHm_Chr7g0185691
rosa_laevigata	RLG00000004894
rosa_multiflora	Rmu_sc0008747.1_g000003 Rmu_sc0010190.1_g000002 Rmu_sc0014651.1_g000001
rosa_roxburghii	Rroxscaffold_3G00268730
rosa_rugosa	Rorug06G0470500
rosa_samantha	Rh7AG071900 Rh7BG076000 Rh7CG076000 Rh7DG076000
rosa_wichuraiana	Rw7G006330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	632
AciI	CCGC	3 cut(s)	384, 406, 743
AclWI	GGATC	1 cut(s)	161
AcoI	YGGCCR	1 cut(s)	495
AcsI	RAATTY	1 cut(s)	775
AcuI	CTGAAG	2 cut(s)	632, 669
AfaI	GTAC	1 cut(s)	286
AfiI	CCNNNNNNNGG	7 cut(s)	78, 150, 493, 498, 627, 632, 744
AgsI	TTSAA	3 cut(s)	413, 533, 780
AjnI	CCWGG	6 cut(s)	72, 244, 492, 497, 631, 640
AjuI	GAANNNNNNNTTGG	2 cut(s)	61, 93
AluBI	AGCT	4 cut(s)	176, 438, 451, 689
AluI	AGCT	4 cut(s)	176, 438, 451, 689
AlwI	GGATC	1 cut(s)	161
AoxI	GGCC	6 cut(s)	141, 300, 495, 572, 629, 652
ApeKI	GCWGC	1 cut(s)	518
ApoI	RAATTY	1 cut(s)	775
AspS9I	GGNCC	4 cut(s)	142, 301, 475, 652
AvaII	GGWCC	1 cut(s)	475
BaeI	ACNNNNGTAYC	2 cut(s)	709, 742
BalI	TGGCCA	1 cut(s)	497
BbsI	GAAGAC	2 cut(s)	113, 344
BbvI	GCAGC	1 cut(s)	530
BccI	CCATC	3 cut(s)	213, 395, 600
BceAI	ACGGC	1 cut(s)	639
BciT130I	CCWGG	6 cut(s)	74, 246, 494, 499, 633, 642
BciVI	GTATCC	1 cut(s)	710
BfaI	CTAG	5 cut(s)	177, 479, 536, 708, 771
BfuI	GTATCC	1 cut(s)	710
BisI	GCNGC	2 cut(s)	407, 519
BlsI	GCNGC	2 cut(s)	408, 520
Bme1390I	CCNGG	6 cut(s)	74, 246, 494, 499, 633, 642
Bme18I	GGWCC	1 cut(s)	475
BmgT120I	GGNCC	4 cut(s)	142, 301, 475, 652
BmiI	GGNNCC	3 cut(s)	70, 144, 303
BmrFI	CCNGG	6 cut(s)	74, 246, 494, 499, 633, 642
BpiI	GAAGAC	2 cut(s)	113, 344
BpuEI	CTTGAG	1 cut(s)	454
BsaJI	CCNNGG	4 cut(s)	72, 245, 492, 626
BsaXI	ACNNNNNCTCC	2 cut(s)	351, 381
Bsc4I	CCNNNNNNNGG	7 cut(s)	78, 150, 493, 498, 627, 632, 744
Bse118I	RCCGGY	1 cut(s)	570
Bse1I	ACTGG	2 cut(s)	195, 477
Bse3DI	GCAATG	2 cut(s)	321, 528
BseBI	CCWGG	6 cut(s)	74, 246, 494, 499, 633, 642
BseDI	CCNNGG	4 cut(s)	72, 245, 492, 626
BseGI	GGATG	2 cut(s)	199, 205
BseLI	CCNNNNNNNGG	7 cut(s)	78, 150, 493, 498, 627, 632, 744
BseMI	GCAATG	2 cut(s)	321, 528
BseNI	ACTGG	2 cut(s)	195, 477
BseRI	GAGGAG	1 cut(s)	776
BseXI	GCAGC	1 cut(s)	530
BshFI	GGCC	6 cut(s)	143, 302, 497, 574, 631, 654
BsiSI	CCGG	1 cut(s)	571
BslFI	GGGAC	1 cut(s)	179
BslI	CCNNNNNNNGG	7 cut(s)	78, 150, 493, 498, 627, 632, 744
BsmFI	GGGAC	1 cut(s)	179
BsmI	GAATGC	1 cut(s)	528
BsnI	GGCC	6 cut(s)	143, 302, 497, 574, 631, 654
Bsp143I	GATC	1 cut(s)	153
BspACI	CCGC	3 cut(s)	384, 406, 743
BspANI	GGCC	6 cut(s)	143, 302, 497, 574, 631, 654
BspHI	TCATGA	1 cut(s)	133
BspLI	GGNNCC	3 cut(s)	70, 144, 303
BspPI	GGATC	1 cut(s)	161
BsrDI	GCAATG	2 cut(s)	321, 528
BsrFI	RCCGGY	1 cut(s)	570
BsrI	ACTGG	2 cut(s)	195, 477
BssAI	RCCGGY	1 cut(s)	570
BssECI	CCNNGG	4 cut(s)	72, 245, 492, 626
BssMI	GATC	1 cut(s)	153
BssT1I	CCWWGG	1 cut(s)	626
Bst2UI	CCWGG	6 cut(s)	74, 246, 494, 499, 633, 642
Bst6I	CTCTTC	1 cut(s)	132
BstAPI	GCANNNNNTGC	1 cut(s)	563
BstC8I	GCNNGC	1 cut(s)	559
BstENI	CCTNNNNNAGG	1 cut(s)	625
BstF5I	GGATG	2 cut(s)	199, 205
BstKTI	GATC	1 cut(s)	156
BstMBI	GATC	1 cut(s)	153
BstMWI	GCNNNNNNNGC	1 cut(s)	563
BstNI	CCWGG	6 cut(s)	74, 246, 494, 499, 633, 642
BstSCI	CCNGG	6 cut(s)	72, 244, 492, 497, 631, 640
BstV1I	GCAGC	1 cut(s)	530
BstV2I	GAAGAC	2 cut(s)	113, 344
BsuI	GTATCC	1 cut(s)	710
BsuRI	GGCC	6 cut(s)	143, 302, 497, 574, 631, 654
BtsCI	GGATG	2 cut(s)	199, 205
BtsIMutI	CAGTG	1 cut(s)	470
Cac8I	GCNNGC	1 cut(s)	559
CciI	TCATGA	1 cut(s)	133
Cfr10I	RCCGGY	1 cut(s)	570
Cfr13I	GGNCC	4 cut(s)	142, 301, 475, 652
Csp6I	GTAC	1 cut(s)	285
CviAII	CATG	8 cut(s)	134, 260, 290, 320, 398, 444, 580, 598
CviQI	GTAC	1 cut(s)	285
DpnI	GATC	1 cut(s)	155
DpnII	GATC	1 cut(s)	153
EaeI	YGGCCR	1 cut(s)	495
Eam1104I	CTCTTC	1 cut(s)	132
EarI	CTCTTC	1 cut(s)	132
Eco130I	CCWWGG	1 cut(s)	626
Eco147I	AGGCCT	1 cut(s)	631
Eco47I	GGWCC	1 cut(s)	475
Eco57I	CTGAAG	2 cut(s)	632, 669
EcoNI	CCTNNNNNAGG	1 cut(s)	625
EcoO109I	RGGNCCY	1 cut(s)	142
EcoRII	CCWGG	6 cut(s)	72, 244, 492, 497, 631, 640
EcoT14I	CCWWGG	1 cut(s)	626
EcoT22I	ATGCAT	1 cut(s)	321
ErhI	CCWWGG	1 cut(s)	626
FaeI	CATG	8 cut(s)	137, 263, 293, 323, 401, 447, 583, 601
FaqI	GGGAC	1 cut(s)	179
FatI	CATG	8 cut(s)	133, 259, 289, 319, 397, 443, 579, 597
FauI	CCCGC	2 cut(s)	377, 736
Fnu4HI	GCNGC	2 cut(s)	407, 519
FokI	GGATG	2 cut(s)	192, 206
Fsp4HI	GCNGC	2 cut(s)	407, 519
FspBI	CTAG	5 cut(s)	177, 479, 536, 708, 771
GluI	GCNGC	2 cut(s)	407, 519
HaeIII	GGCC	6 cut(s)	143, 302, 497, 574, 631, 654
HapII	CCGG	1 cut(s)	571
Hin1II	CATG	8 cut(s)	137, 263, 293, 323, 401, 447, 583, 601
HincII	GTYRAC	1 cut(s)	484
HindII	GTYRAC	1 cut(s)	484
HinfI	GANTC	3 cut(s)	237, 360, 611
HpaII	CCGG	1 cut(s)	571
Hpy166II	GTNNAC	2 cut(s)	484, 638
Hpy188I	TCNGA	3 cut(s)	24, 96, 220
Hpy188III	TCNNGA	5 cut(s)	66, 134, 433, 509, 771
Hpy8I	GTNNAC	2 cut(s)	484, 638
Hpy99I	CGWCG	1 cut(s)	88
HpyAV	CCTTC	3 cut(s)	140, 460, 797
HpyCH4IV	ACGT	1 cut(s)	664
HpyCH4V	TGCA	5 cut(s)	314, 319, 504, 528, 566
HpyF10VI	GCNNNNNNNGC	1 cut(s)	563
HpySE526I	ACGT	1 cut(s)	664
Hsp92II	CATG	8 cut(s)	137, 263, 293, 323, 401, 447, 583, 601
Kzo9I	GATC	1 cut(s)	153
Lsp1109I	GCAGC	1 cut(s)	530
MaeI	CTAG	5 cut(s)	177, 479, 536, 708, 771
MaeII	ACGT	1 cut(s)	664
MaeIII	GTNAC	2 cut(s)	125, 727
MalI	GATC	1 cut(s)	155
MboI	GATC	1 cut(s)	153
MboII	GAAGA	5 cut(s)	11, 113, 149, 349, 783
MlsI	TGGCCA	1 cut(s)	497
MluCI	AATT	3 cut(s)	99, 775, 780
MluNI	TGGCCA	1 cut(s)	497
MlyI	GAGTC	2 cut(s)	231, 369
MmeI	TCCRAC	2 cut(s)	351, 647
Mox20I	TGGCCA	1 cut(s)	497
Mph1103I	ATGCAT	1 cut(s)	321
MscI	TGGCCA	1 cut(s)	497
Msp20I	TGGCCA	1 cut(s)	497
MspA1I	CMGCKG	1 cut(s)	384
MspI	CCGG	1 cut(s)	571
MspR9I	CCNGG	6 cut(s)	74, 246, 494, 499, 633, 642
Mva1269I	GAATGC	1 cut(s)	528
MvaI	CCWGG	6 cut(s)	74, 246, 494, 499, 633, 642
MwoI	GCNNNNNNNGC	1 cut(s)	563
NdeII	GATC	1 cut(s)	153
NlaIII	CATG	8 cut(s)	137, 263, 293, 323, 401, 447, 583, 601
NlaIV	GGNNCC	3 cut(s)	70, 144, 303
NsiI	ATGCAT	1 cut(s)	321
PagI	TCATGA	1 cut(s)	133
PceI	AGGCCT	1 cut(s)	631
PctI	GAATGC	1 cut(s)	528
PfeI	GAWTC	1 cut(s)	611
PflMI	CCANNNNNTGG	1 cut(s)	632
PkrI	GCNGC	2 cut(s)	408, 520
PleI	GAGTC	2 cut(s)	231, 368
PpsI	GAGTC	2 cut(s)	231, 368
Psp6I	CCWGG	6 cut(s)	72, 244, 492, 497, 631, 640
PspGI	CCWGG	6 cut(s)	72, 244, 492, 497, 631, 640
PspN4I	GGNNCC	3 cut(s)	70, 144, 303
PspPI	GGNCC	4 cut(s)	142, 301, 475, 652
RsaI	GTAC	1 cut(s)	286
RsaNI	GTAC	1 cut(s)	285
SatI	GCNGC	2 cut(s)	407, 519
Sau3AI	GATC	1 cut(s)	153
Sau96I	GGNCC	4 cut(s)	142, 301, 475, 652
SchI	GAGTC	2 cut(s)	231, 369
ScrFI	CCNGG	6 cut(s)	74, 246, 494, 499, 633, 642
SinI	GGWCC	1 cut(s)	475
SmlI	CTYRAG	1 cut(s)	433
SmoI	CTYRAG	1 cut(s)	433
Sse9I	AATT	3 cut(s)	99, 775, 780
SseBI	AGGCCT	1 cut(s)	631
SsiI	CCGC	3 cut(s)	384, 406, 743
SspMI	CTAG	5 cut(s)	177, 479, 536, 708, 771
StuI	AGGCCT	1 cut(s)	631
StyD4I	CCNGG	6 cut(s)	72, 244, 492, 497, 631, 640
StyI	CCWWGG	1 cut(s)	626
TaiI	ACGT	1 cut(s)	667
TaqI	TCGA	2 cut(s)	605, 794
TasI	AATT	3 cut(s)	99, 775, 780
TauI	GCSGC	1 cut(s)	409
TfiI	GAWTC	1 cut(s)	611
TscAI	CASTG	1 cut(s)	477
TseI	GCWGC	1 cut(s)	518
TspDTI	ATGAA	5 cut(s)	122, 149, 150, 596, 603
TspGWI	ACGGA	1 cut(s)	322
TspRI	CASTG	1 cut(s)	477
Van91I	CCANNNNNTGG	1 cut(s)	632
VpaK11BI	GGWCC	1 cut(s)	475
XagI	CCTNNNNNAGG	1 cut(s)	625
XapI	RAATTY	1 cut(s)	775
XbaI	TCTAGA	1 cut(s)	770
XspI	CTAG	5 cut(s)	177, 479, 536, 708, 771
Zsp2I	ATGCAT	1 cut(s)	321

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.