MD14G1235000.v1.1

Domain in histone families 1 and 5

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr14
OG0009974
Physical Location & Seq
Forward (+)
31495391 .. 31499114
3724 bp
Loading structure...
UTR
Exon/CDS
Intron
MD14G1235000.v1.1.491

Sequence Viewer

Length: 1488 bp
ATGGACCCACCGCCCCCTCCATATTCAAGTCCGCATCTTTATCCAGCGGCCGTCACCGCCCTCTCCGCCGCCGCAACCATCACCCCCGCCACCGTCGAAGCTCACAATTATAACATTATCACCACTACCCATGTGGCTGCCAACCCCACCCCTGCTCCGAACCCTACTCCCAATCACCCTCCTTACGCCGAGATGATATACGGAGCGATAACGGCGTTAAAGGAGAAGGACGGGTCGAGCAAGAGGGCGATAGCGAAGTACATAGAGCGAGTCTACTCGGGGCTTCCGGCGACTCACTCGGCCTTGTTGACTCACCACCTCAAGCGCTTGAAGAACAATGGTCACCTCCTTATGGTCAAAAAGTCGTACAAGCTTCCTGGATCTGAGGGTTCCGTTCCCCCTCCTCCTACTTCAGCTGCTGATGCTGCCGGCACGGCGGCGATTCCCTCTCCCGGGCTCGCAAGAGGCCGCGGCCGCCCTCCCAAAAACAAGCCCATTTCTGACCAGCCTAATTCCCAACAACCCATTTCCCAGCAATTCATTCCCTTTCCCCCGCAGCAGCAGCAGCAACCTATTCCAATTCTCCAGCTGCCCACTTCACAGCAACCCTTTCCGATTCCCCAGCAGACCAATTCCTACCACCAACAACCCATTCCCATCCCCCAGCAGCTCAATTCCAATCCCATCCCAGCTGAGCCCAATTCCCAGCCCATGCTAGTCGCTCTCGGACTCGCCGACGAGCCAGGGTCGGAGAAGAGGCGCCCAGGTAGGCCGCGTAAGGTGGTTGTGGGTGCTGGAGTCGGACAAGCTGTGGGCAGCCCAGTGTCTGGCAAGAGGGGCCGGGGTCGTCCGCCTGGCACCAGGTTGCCAAAGAAGAAGGCTGGGCGTCCTCCCAAGCCAAAGTCCGTGTCTGCTGTTGGAGGCCTTAACGGACTTGCGAAGAGGGGCCGCGGGAGGCCCTCAAAAGCTGAGCCAAAGAGCGTGTACTTTCCGTACGCCACCAATGTGCCTATCATTGGTGCGTTTGAGCAGAACAATGTGCCCAATGTGGTGGCGCCACAGCAACCGCAGCTGGGGGCGAAGCGCAGAGGCCGGCCCTCCAAGAAGAAGGAAGAAGCTGCTTCTGCTGCTACTGTGCGTGTTGGTGGTTTGGTGCCCGGTAAGCGTGGCCGGCCACCTGGGCTGCCTGGAATAGAGCGGCCCTCGAGAAAAAGTGGAAGGCCCGTTGGCAGGCCGAGGAAGAATGCATTAGCTGAAATAACTGAAGCGCCGGATCCAAAATCGGTTGCCAATGGAGAATTTAAGAGGAAACTTGAGTACTTTCAATTCAAAGTGGGTCAGGCTGTTGGTGCGCTAAAACCTTACTTAACCCCTGAAAGCGCAGGCAATGCCATTGCAGCAATCCAAGAATTAGAAGGGCTTGCAACCATGGACATTAACACCCCATTAGATATTGAAGCTCAGCAGCCACCAATGCTCCAAAGTTGA

Protein Analysis

496

Amino Acids

52.49

Weight (kDa)

10.39

Isoelectric Point (pI)

55.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Linker_histone PF00538 59 - 121 3.1e-14 linker histone H1 and H5 family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0009974)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G48620 AT3G18035 AT3G18035
fragaria_vesca FvH4_5g17210
malus_domestica MD06G1230400.v1.1 MD14G1235000.v1.1
prunus_persica Prupe.5G231600_v2.0.a1
pyrus_communis pycom06g20160 pycom14g19600
rosa_chinensis RchiOBHm_Chr1g0337641 RchiOBHm_Chr7g0178581
rosa_laevigata RLG00000005435
rosa_multiflora Rmu_sc0002320.1_g000001
rosa_roxburghii Rroxscaffold_3G00274790
rosa_rugosa Rorug06G0418100
rosa_samantha Rh7AG016800 Rh7BG016300 Rh7CG017000 Rh7DG016900 Rh7DG161800
rosa_wichuraiana Rw7G001340

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 111
AccB1I GGYRCC 4 cut(s) 759, 857, 1054, 1153
AccB7I CCANNNNNTGG 1 cut(s) 827
AccBSI CCGCTC 1 cut(s) 1198
AccI GTMKAC 1 cut(s) 273
AccII CGCG 3 cut(s) 471, 775, 951
AclWI GGATC 3 cut(s) 388, 1268, 1281
AcoI YGGCCR 4 cut(s) 48, 472, 1168, 1172
AcsI RAATTY 1 cut(s) 1298
AcuI CTGAAG 2 cut(s) 396, 1284
AcyI GRCGYC 3 cut(s) 760, 886, 1055
AfaI GTAC 5 cut(s) 260, 368, 986, 995, 1319
AfeI AGCGCT 1 cut(s) 326
AfiI CCNNNNNNNGG 7 cut(s) 352, 452, 453, 827, 1016, 1073, 1230
AgsI TTSAA 5 cut(s) 27, 331, 1325, 1330, 1457
AjnI CCWGG 7 cut(s) 376, 742, 763, 853, 860, 1177, 1186
AjuI GAANNNNNNNTTGG 2 cut(s) 636, 668
AleI CACNNNNGTG 1 cut(s) 1004
AlwI GGATC 3 cut(s) 388, 1268, 1281
AlwNI CAGNNNCTG 2 cut(s) 419, 827
Ama87I CYCGRG 3 cut(s) 277, 452, 1204
Aor51HI AGCGCT 1 cut(s) 326
ApoI RAATTY 1 cut(s) 1298
ArsI GACNNNNNNTTYG 2 cut(s) 893, 925
AspLEI GCGC 7 cut(s) 327, 762, 1057, 1086, 1270, 1354, 1382
AspS9I GGNCC 7 cut(s) 4, 838, 946, 957, 1095, 1200, 1221
AsuC2I CCSGG 4 cut(s) 453, 454, 842, 1158
AsuHPI GGTGA 6 cut(s) 46, 73, 112, 167, 305, 335
AvaI CYCGRG 3 cut(s) 277, 452, 1204
AvaII GGWCC 1 cut(s) 4
BaeGI GKGCMC 2 cut(s) 1044, 1158
BamHI GGATCC 1 cut(s) 1273
BanI GGYRCC 4 cut(s) 759, 857, 1054, 1153
BanII GRGCYC 2 cut(s) 459, 699
BccI CCATC 3 cut(s) 86, 665, 692
BceAI ACGGC 3 cut(s) 35, 228, 450
BciT130I CCWGG 7 cut(s) 378, 744, 765, 855, 862, 1179, 1188
BcnI CCSGG 4 cut(s) 453, 454, 842, 1158
BfaI CTAG 1 cut(s) 716
BfoI RGCGCY 4 cut(s) 328, 763, 1058, 1271
BglI GCCNNNNNGGC 2 cut(s) 434, 1180
BlpI GCTNAGC 3 cut(s) 693, 969, 1461
BmcAI AGTACT 1 cut(s) 1319
Bme18I GGWCC 1 cut(s) 4
BmeT110I CYCGRG 3 cut(s) 277, 452, 1204
BmgT120I GGNCC 7 cut(s) 4, 838, 946, 957, 1095, 1200, 1221
BmiI GGNNCC 9 cut(s) 6, 391, 761, 839, 859, 947, 1056, 1155, 1275
BmrI ACTGGG 1 cut(s) 815
BmsI GCATC 2 cut(s) 43, 412
BmuI ACTGGG 1 cut(s) 815
BplI GAGNNNNNCTC 2 cut(s) 1187, 1219
BpmI CTGGAG 2 cut(s) 569, 816
Bpu1102I GCTNAGC 3 cut(s) 693, 969, 1461
BpuEI CTTGAG 2 cut(s) 305, 1334
BpuMI CCSGG 4 cut(s) 453, 454, 842, 1158
BsaHI GRCGYC 3 cut(s) 760, 886, 1055
BsaJI CCNNGG 9 cut(s) 452, 469, 743, 763, 841, 949, 1178, 1235, 1428
BsaXI ACNNNNNCTCC 3 cut(s) 139, 169, 1461
Bsc4I CCNNNNNNNGG 7 cut(s) 352, 452, 453, 827, 1016, 1073, 1230
Bse118I RCCGGY 3 cut(s) 428, 1092, 1170
Bse1I ACTGG 1 cut(s) 821
Bse3DI GCAATG 2 cut(s) 1392, 1393
BseBI CCWGG 7 cut(s) 378, 744, 765, 855, 862, 1179, 1188
BseDI CCNNGG 9 cut(s) 452, 469, 743, 763, 841, 949, 1178, 1235, 1428
BseGI GGATG 2 cut(s) 657, 684
BseLI CCNNNNNNNGG 7 cut(s) 352, 452, 453, 827, 1016, 1073, 1230
BseMI GCAATG 2 cut(s) 1392, 1393
BseMII CTCAG 4 cut(s) 375, 684, 960, 1475
BseNI ACTGG 1 cut(s) 821
BseRI GAGGAG 1 cut(s) 393
BseSI GKGCMC 2 cut(s) 1044, 1158
BseX3I CGGCCG 2 cut(s) 48, 472
BseYI CCCAGC 7 cut(s) 531, 621, 663, 688, 705, 881, 1072
Bsh1236I CGCG 3 cut(s) 471, 775, 951
Bsh1285I CGRYCG 2 cut(s) 51, 475
BshNI GGYRCC 4 cut(s) 759, 857, 1054, 1153
BsiEI CGRYCG 2 cut(s) 51, 475
BsiHKCI CYCGRG 3 cut(s) 277, 452, 1204
BsiSI CCGG 8 cut(s) 287, 429, 453, 841, 1093, 1158, 1171, 1271
BsiWI CGTACG 1 cut(s) 993
BslI CCNNNNNNNGG 7 cut(s) 352, 452, 453, 827, 1016, 1073, 1230
BsmI GAATGC 1 cut(s) 1249
BsoBI CYCGRG 3 cut(s) 277, 452, 1204
Bsp1286I GDGCHC 4 cut(s) 459, 699, 1044, 1158
Bsp143I GATC 2 cut(s) 380, 1273
Bsp1720I GCTNAGC 3 cut(s) 693, 969, 1461
Bsp19I CCATGG 1 cut(s) 1428
BspCNI CTCAG 4 cut(s) 376, 685, 961, 1474
BspFNI CGCG 3 cut(s) 471, 775, 951
BspLI GGNNCC 9 cut(s) 6, 391, 761, 839, 859, 947, 1056, 1155, 1275
BspPI GGATC 3 cut(s) 388, 1268, 1281
BspT107I GGYRCC 4 cut(s) 759, 857, 1054, 1153
BsrBI CCGCTC 1 cut(s) 1198
BsrDI GCAATG 2 cut(s) 1392, 1393
BsrFI RCCGGY 3 cut(s) 428, 1092, 1170
BsrI ACTGG 1 cut(s) 821
BssAI RCCGGY 3 cut(s) 428, 1092, 1170
BssECI CCNNGG 9 cut(s) 452, 469, 743, 763, 841, 949, 1178, 1235, 1428
BssMI GATC 2 cut(s) 380, 1273
BssNI GRCGYC 3 cut(s) 760, 886, 1055
BssT1I CCWWGG 1 cut(s) 1428
Bst2UI CCWGG 7 cut(s) 378, 744, 765, 855, 862, 1179, 1188
Bst4CI ACNGT 2 cut(s) 94, 1135
Bst6I CTCTTC 2 cut(s) 749, 935
BstACI GRCGYC 3 cut(s) 760, 886, 1055
BstAPI GCANNNNNTGC 1 cut(s) 1388
BstC8I GCNNGC 7 cut(s) 430, 459, 1094, 1172, 1232, 1384, 1422
BstDEI CTNAG 4 cut(s) 384, 693, 969, 1461
BstDSI CCRYGG 3 cut(s) 469, 949, 1428
BstEII GGTNACC 1 cut(s) 341
BstF5I GGATG 2 cut(s) 657, 684
BstFNI CGCG 3 cut(s) 471, 775, 951
BstH2I RGCGCY 4 cut(s) 328, 763, 1058, 1271
BstHHI GCGC 7 cut(s) 327, 762, 1057, 1086, 1270, 1354, 1382
BstKTI GATC 2 cut(s) 383, 1276
BstMBI GATC 2 cut(s) 380, 1273
BstMCI CGRYCG 2 cut(s) 51, 475
BstNI CCWGG 7 cut(s) 378, 744, 765, 855, 862, 1179, 1188
BstPI GGTNACC 1 cut(s) 341
BstSLI GKGCMC 2 cut(s) 1044, 1158
BstUI CGCG 3 cut(s) 471, 775, 951
BstX2I RGATCY 2 cut(s) 380, 1273
BstXI CCANNNNNNTGG 1 cut(s) 1051
BstYI RGATCY 2 cut(s) 380, 1273
BstZI CGGCCG 2 cut(s) 48, 472
BtgI CCRYGG 3 cut(s) 469, 949, 1428
BtsCI GGATG 2 cut(s) 657, 684
BtsIMutI CAGTG 1 cut(s) 828
Cac8I GCNNGC 7 cut(s) 430, 459, 1094, 1172, 1232, 1384, 1422
CaiI CAGNNNCTG 2 cut(s) 419, 827
CciNI GCGGCCGC 1 cut(s) 472
CfoI GCGC 7 cut(s) 327, 762, 1057, 1086, 1270, 1354, 1382
Cfr10I RCCGGY 3 cut(s) 428, 1092, 1170
Cfr13I GGNCC 7 cut(s) 4, 838, 946, 957, 1095, 1200, 1221
Cfr42I CCGCGG 2 cut(s) 472, 952
Cfr9I CCCGGG 1 cut(s) 452
CseI GACGC 1 cut(s) 875
CsiI ACCWGGT 1 cut(s) 860
Csp6I GTAC 5 cut(s) 259, 367, 985, 994, 1318
CviAII CATG 3 cut(s) 131, 712, 1429
CviQI GTAC 5 cut(s) 259, 367, 985, 994, 1318
DdeI CTNAG 4 cut(s) 384, 693, 969, 1461
DinI GGCGCC 2 cut(s) 761, 1056
DpnI GATC 2 cut(s) 382, 1275
DpnII GATC 2 cut(s) 380, 1273
EaeI YGGCCR 4 cut(s) 48, 472, 1168, 1172
EagI CGGCCG 2 cut(s) 48, 472
Eam1104I CTCTTC 2 cut(s) 749, 935
EarI CTCTTC 2 cut(s) 749, 935
EciI GGCGGA 2 cut(s) 55, 840
EclXI CGGCCG 2 cut(s) 48, 472
Eco130I CCWWGG 1 cut(s) 1428
Eco147I AGGCCT 1 cut(s) 924
Eco24I GRGCYC 2 cut(s) 459, 699
Eco47I GGWCC 1 cut(s) 4
Eco47III AGCGCT 1 cut(s) 326
Eco52I CGGCCG 2 cut(s) 48, 472
Eco57I CTGAAG 2 cut(s) 396, 1284
Eco88I CYCGRG 3 cut(s) 277, 452, 1204
Eco91I GGTNACC 1 cut(s) 341
EcoO109I RGGNCCY 1 cut(s) 957
EcoO65I GGTNACC 1 cut(s) 341
EcoRII CCWGG 7 cut(s) 376, 742, 763, 853, 860, 1177, 1186
EcoT14I CCWWGG 1 cut(s) 1428
EcoT22I ATGCAT 1 cut(s) 1249
EcoT38I GRGCYC 2 cut(s) 459, 699
EgeI GGCGCC 2 cut(s) 761, 1056
EheI GGCGCC 2 cut(s) 761, 1056
ErhI CCWWGG 1 cut(s) 1428
FaeI CATG 3 cut(s) 134, 715, 1432
FaiI YATR 8 cut(s) 22, 111, 132, 199, 263, 353, 713, 1430
FatI CATG 3 cut(s) 130, 711, 1428
FauI CCCGC 3 cut(s) 94, 561, 944
FblI GTMKAC 1 cut(s) 273
FokI GGATG 2 cut(s) 644, 671
FriOI GRGCYC 2 cut(s) 459, 699
FseI GGCCGGCC 2 cut(s) 1096, 1174
FspBI CTAG 1 cut(s) 716
GlaI GCGC 7 cut(s) 326, 761, 1056, 1085, 1269, 1353, 1381
GsaI CCCAGC 7 cut(s) 535, 625, 667, 692, 709, 885, 1076
GsuI CTGGAG 2 cut(s) 569, 816
HaeII RGCGCY 4 cut(s) 328, 763, 1058, 1271
HapII CCGG 8 cut(s) 287, 429, 453, 841, 1093, 1158, 1171, 1271
HgaI GACGC 1 cut(s) 875
HhaI GCGC 7 cut(s) 327, 762, 1057, 1086, 1270, 1354, 1382
Hin1I GRCGYC 3 cut(s) 760, 886, 1055
Hin1II CATG 3 cut(s) 134, 715, 1432
Hin6I GCGC 7 cut(s) 325, 760, 1055, 1084, 1268, 1352, 1380
HinP1I GCGC 7 cut(s) 325, 760, 1055, 1084, 1268, 1352, 1380
HincII GTYRAC 1 cut(s) 309
HindII GTYRAC 1 cut(s) 309
HindIII AAGCTT 1 cut(s) 371
HinfI GANTC 7 cut(s) 270, 292, 310, 442, 616, 729, 798
HpaII CCGG 8 cut(s) 287, 429, 453, 841, 1093, 1158, 1171, 1271
HphI GGTGA 6 cut(s) 46, 73, 112, 167, 305, 335
Hpy166II GTNNAC 3 cut(s) 274, 309, 985
Hpy188I TCNGA 7 cut(s) 159, 385, 502, 615, 728, 751, 803
Hpy188III TCNNGA 1 cut(s) 1206
Hpy8I GTNNAC 3 cut(s) 274, 309, 985
Hpy99I CGWCG 2 cut(s) 98, 740
HpyAV CCTTC 5 cut(s) 220, 871, 1102, 1212, 1409
HpyCH4III ACNGT 2 cut(s) 94, 1135
HpyCH4V TGCA 3 cut(s) 1247, 1397, 1424
HpyF3I CTNAG 4 cut(s) 384, 693, 969, 1461
Hsp92I GRCGYC 3 cut(s) 760, 886, 1055
Hsp92II CATG 3 cut(s) 134, 715, 1432
HspAI GCGC 7 cut(s) 325, 760, 1055, 1084, 1268, 1352, 1380
KasI GGCGCC 2 cut(s) 759, 1054
KroI GCCGGC 3 cut(s) 428, 1092, 1170
KroNI GCCGGC 3 cut(s) 430, 1094, 1172
KspI CCGCGG 2 cut(s) 472, 952
Kzo9I GATC 2 cut(s) 380, 1273
LmnI GCTCC 3 cut(s) 160, 203, 1482
LweI GCATC 2 cut(s) 43, 412
MabI ACCWGGT 1 cut(s) 860
MaeI CTAG 1 cut(s) 716
MaeIII GTNAC 2 cut(s) 52, 341
MalI GATC 2 cut(s) 382, 1275
MbiI CCGCTC 1 cut(s) 1198
MboI GATC 2 cut(s) 380, 1273
MboII GAAGA 7 cut(s) 343, 766, 886, 952, 1117, 1124, 1252
MflI RGATCY 2 cut(s) 380, 1273
MhlI GDGCHC 4 cut(s) 459, 699, 1044, 1158
Mly113I GGCGCC 2 cut(s) 760, 1055
MlyI GAGTC 5 cut(s) 279, 286, 304, 723, 807
MmeI TCCRAC 3 cut(s) 729, 781, 898
Mph1103I ATGCAT 1 cut(s) 1249
MroNI GCCGGC 3 cut(s) 428, 1092, 1170
MseI TTAA 5 cut(s) 218, 927, 1302, 1367, 1437
MslI CAYNNNNRTG 1 cut(s) 1004
MspA1I CMGCKG 7 cut(s) 47, 416, 471, 589, 692, 951, 1072
MspI CCGG 8 cut(s) 287, 429, 453, 841, 1093, 1158, 1171, 1271
Mva1269I GAATGC 1 cut(s) 1249
MvaI CCWGG 7 cut(s) 378, 744, 765, 855, 862, 1179, 1188
MvnI CGCG 3 cut(s) 471, 775, 951
NaeI GCCGGC 3 cut(s) 430, 1094, 1172
NarI GGCGCC 2 cut(s) 760, 1055
NciI CCSGG 4 cut(s) 453, 454, 842, 1158
NcoI CCATGG 1 cut(s) 1428
NdeII GATC 2 cut(s) 380, 1273
NgoMIV GCCGGC 3 cut(s) 428, 1092, 1170
NlaIII CATG 3 cut(s) 134, 715, 1432
NlaIV GGNNCC 9 cut(s) 6, 391, 761, 839, 859, 947, 1056, 1155, 1275
NmeAIII GCCGAG 3 cut(s) 214, 278, 1260
NmuCI GTSAC 2 cut(s) 52, 341
NotI GCGGCCGC 1 cut(s) 472
NsiI ATGCAT 1 cut(s) 1249
OliI CACNNNNGTG 1 cut(s) 1004
PaeR7I CTCGAG 1 cut(s) 1204
PceI AGGCCT 1 cut(s) 924
PcsI WCGNNNNNNNCGW 1 cut(s) 732
PctI GAATGC 1 cut(s) 1249
PdiI GCCGGC 3 cut(s) 430, 1094, 1172
PfeI GAWTC 2 cut(s) 442, 616
Pfl23II CGTACG 1 cut(s) 993
PflMI CCANNNNNTGG 1 cut(s) 827
PfoI TCCNGGA 1 cut(s) 376
PleI GAGTC 5 cut(s) 278, 286, 304, 723, 806
PluTI GGCGCC 2 cut(s) 763, 1058
PpsI GAGTC 5 cut(s) 278, 286, 304, 723, 806
PsiI TTATAA 1 cut(s) 111
Psp6I CCWGG 7 cut(s) 376, 742, 763, 853, 860, 1177, 1186
PspEI GGTNACC 1 cut(s) 341
PspFI CCCAGC 7 cut(s) 531, 621, 663, 688, 705, 881, 1072
PspGI CCWGG 7 cut(s) 376, 742, 763, 853, 860, 1177, 1186
PspLI CGTACG 1 cut(s) 993
PspN4I GGNNCC 9 cut(s) 6, 391, 761, 839, 859, 947, 1056, 1155, 1275
PspPI GGNCC 7 cut(s) 4, 838, 946, 957, 1095, 1200, 1221
PstNI CAGNNNCTG 2 cut(s) 419, 827
PsuI RGATCY 2 cut(s) 380, 1273
PvuII CAGCTG 4 cut(s) 416, 589, 692, 1072
RigI GGCCGGCC 2 cut(s) 1096, 1174
RsaI GTAC 5 cut(s) 260, 368, 986, 995, 1319
RsaNI GTAC 5 cut(s) 259, 367, 985, 994, 1318
RseI CAYNNNNRTG 1 cut(s) 1004
SacII CCGCGG 2 cut(s) 472, 952
SaqAI TTAA 5 cut(s) 218, 927, 1302, 1367, 1437
Sau3AI GATC 2 cut(s) 380, 1273
Sau96I GGNCC 7 cut(s) 4, 838, 946, 957, 1095, 1200, 1221
ScaI AGTACT 1 cut(s) 1319
SchI GAGTC 5 cut(s) 279, 286, 304, 723, 807
SduI GDGCHC 4 cut(s) 459, 699, 1044, 1158
SexAI ACCWGGT 1 cut(s) 860
SfaNI GCATC 2 cut(s) 43, 412
SfoI GGCGCC 2 cut(s) 761, 1056
Sfr274I CTCGAG 1 cut(s) 1204
Sfr303I CCGCGG 2 cut(s) 472, 952
SgrBI CCGCGG 2 cut(s) 472, 952
SinI GGWCC 1 cut(s) 4
SlaI CTCGAG 1 cut(s) 1204
SmaI CCCGGG 1 cut(s) 454
SmiMI CAYNNNNRTG 1 cut(s) 1004
SmlI CTYRAG 3 cut(s) 320, 1204, 1313
SmoI CTYRAG 3 cut(s) 320, 1204, 1313
SseBI AGGCCT 1 cut(s) 924
SspDI GGCGCC 2 cut(s) 759, 1054
SspMI CTAG 1 cut(s) 716
StuI AGGCCT 1 cut(s) 924
StyI CCWWGG 1 cut(s) 1428
TaaI ACNGT 2 cut(s) 94, 1135
TaqI TCGA 3 cut(s) 96, 236, 1205
TatI WGTACW 3 cut(s) 258, 984, 1317
TfiI GAWTC 2 cut(s) 442, 616
Tru1I TTAA 5 cut(s) 218, 927, 1302, 1367, 1437
Tru9I TTAA 5 cut(s) 218, 927, 1302, 1367, 1437
TscAI CASTG 1 cut(s) 828
TseFI GTSAC 2 cut(s) 52, 341
Tsp45I GTSAC 2 cut(s) 52, 341
TspDTI ATGAA 1 cut(s) 529
TspGWI ACGGA 5 cut(s) 216, 382, 895, 945, 981
TspMI CCCGGG 1 cut(s) 452
TspRI CASTG 1 cut(s) 828
Van91I CCANNNNNTGG 1 cut(s) 827
VpaK11BI GGWCC 1 cut(s) 4
XapI RAATTY 1 cut(s) 1298
XcmI CCANNNNNNNNNTGG 1 cut(s) 130
XhoI CTCGAG 1 cut(s) 1204
XmaI CCCGGG 1 cut(s) 452
XmiI GTMKAC 1 cut(s) 273
XspI CTAG 1 cut(s) 716
ZrmI AGTACT 1 cut(s) 1319
Zsp2I ATGCAT 1 cut(s) 1249
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.