Domain in histone families 1 and 5
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G48620 AT3G18035 AT3G18035 |
| fragaria_vesca | FvH4_5g17210 |
| malus_domestica | MD06G1230400.v1.1 MD14G1235000.v1.1 |
| prunus_persica | Prupe.5G231600_v2.0.a1 |
| pyrus_communis | pycom06g20160 pycom14g19600 |
| rosa_chinensis | RchiOBHm_Chr1g0337641 RchiOBHm_Chr7g0178581 |
| rosa_laevigata | RLG00000005435 |
| rosa_multiflora | Rmu_sc0002320.1_g000001 |
| rosa_roxburghii | Rroxscaffold_3G00274790 |
| rosa_rugosa | Rorug06G0418100 |
| rosa_samantha | Rh7AG016800 Rh7BG016300 Rh7CG017000 Rh7DG016900 Rh7DG161800 |
| rosa_wichuraiana | Rw7G001340 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 810 |
| AclWI | GGATC | 1 cut(s) | 854 |
| AcoI | YGGCCR | 2 cut(s) | 481, 1229 |
| AcsI | RAATTY | 1 cut(s) | 748 |
| AcuI | CTGAAG | 2 cut(s) | 132, 1314 |
| AcyI | GRCGYC | 3 cut(s) | 811, 934, 1003 |
| AfaI | GTAC | 3 cut(s) | 269, 1043, 1243 |
| AfeI | AGCGCT | 2 cut(s) | 225, 335 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 361, 461, 473, 718, 882, 1063, 1064, 1134, 1194 |
| AgsI | TTSAA | 4 cut(s) | 340, 1346, 1355, 1487 |
| AjnI | CCWGG | 5 cut(s) | 814, 901, 928, 1207, 1216 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 160, 192, 1016, 1048 |
| Alw21I | GWGCWC | 1 cut(s) | 1509 |
| Alw26I | GTCTC | 2 cut(s) | 82, 356 |
| AlwI | GGATC | 1 cut(s) | 854 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 428 |
| Ama87I | CYCGRG | 3 cut(s) | 286, 728, 1187 |
| Aor51HI | AGCGCT | 2 cut(s) | 225, 335 |
| ApaI | GGGCCC | 2 cut(s) | 468, 974 |
| ApoI | RAATTY | 1 cut(s) | 748 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 935, 967 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 534, 672, 1350 |
| AspLEI | GCGC | 3 cut(s) | 226, 336, 813 |
| AsuC2I | CCSGG | 4 cut(s) | 890, 998, 1188, 1189 |
| AsuHPI | GGTGA | 2 cut(s) | 176, 814 |
| AvaI | CYCGRG | 3 cut(s) | 286, 728, 1187 |
| AvaII | GGWCC | 1 cut(s) | 4 |
| BaeGI | GKGCMC | 5 cut(s) | 468, 974, 1092, 1188, 1474 |
| BanI | GGYRCC | 1 cut(s) | 810 |
| BanII | GRGCYC | 4 cut(s) | 468, 735, 974, 1023 |
| BauI | CACGAG | 1 cut(s) | 983 |
| BbsI | GAAGAC | 1 cut(s) | 1024 |
| Bbv12I | GWGCWC | 1 cut(s) | 1509 |
| BbvCI | CCTCAGC | 1 cut(s) | 540 |
| BccI | CCATC | 5 cut(s) | 59, 80, 101, 333, 512 |
| BceAI | ACGGC | 3 cut(s) | 462, 994, 1244 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1400, 1434 |
| BciT130I | CCWGG | 5 cut(s) | 816, 903, 930, 1209, 1218 |
| BciVI | GTATCC | 2 cut(s) | 883, 967 |
| BcnI | CCSGG | 4 cut(s) | 890, 998, 1188, 1189 |
| BcoDI | GTCTC | 2 cut(s) | 82, 356 |
| BfaI | CTAG | 2 cut(s) | 246, 387 |
| BfmI | CTRYAG | 1 cut(s) | 258 |
| BfoI | RGCGCY | 3 cut(s) | 227, 337, 814 |
| BfuI | GTATCC | 2 cut(s) | 883, 967 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 978 |
| BglII | AGATCT | 1 cut(s) | 389 |
| BlpI | GCTNAGC | 1 cut(s) | 1017 |
| BmcAI | AGTACT | 1 cut(s) | 1243 |
| Bme1390I | CCNGG | 9 cut(s) | 816, 890, 903, 930, 998, 1188, 1189, 1209, 1218 |
| Bme18I | GGWCC | 1 cut(s) | 4 |
| BmeT110I | CYCGRG | 3 cut(s) | 286, 728, 1187 |
| BmiI | GGNNCC | 8 cut(s) | 6, 466, 812, 887, 972, 973, 995, 1199 |
| BmrFI | CCNGG | 9 cut(s) | 816, 890, 903, 930, 998, 1188, 1189, 1209, 1218 |
| BmrI | ACTGGG | 1 cut(s) | 513 |
| BmsI | GCATC | 2 cut(s) | 385, 1141 |
| BmuI | ACTGGG | 1 cut(s) | 513 |
| BpiI | GAAGAC | 1 cut(s) | 1024 |
| BpmI | CTGGAG | 2 cut(s) | 560, 596 |
| Bpu10I | CCTNAGC | 1 cut(s) | 540 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1017 |
| BpuEI | CTTGAG | 3 cut(s) | 212, 314, 454 |
| BpuMI | CCSGG | 4 cut(s) | 890, 998, 1188, 1189 |
| BsaAI | YACGTR | 1 cut(s) | 827 |
| BsaHI | GRCGYC | 3 cut(s) | 811, 934, 1003 |
| BsaI | GGTCTC | 1 cut(s) | 356 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 148, 178, 558, 588 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 361, 461, 473, 718, 882, 1063, 1064, 1134, 1194 |
| Bse118I | RCCGGY | 1 cut(s) | 1134 |
| Bse1I | ACTGG | 4 cut(s) | 519, 1249, 1253, 1502 |
| Bse3DI | GCAATG | 2 cut(s) | 352, 1422 |
| BseBI | CCWGG | 5 cut(s) | 816, 903, 930, 1209, 1218 |
| BseGI | GGATG | 3 cut(s) | 34, 504, 1156 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 361, 461, 473, 718, 882, 1063, 1064, 1134, 1194 |
| BseMI | GCAATG | 2 cut(s) | 352, 1422 |
| BseMII | CTCAG | 4 cut(s) | 189, 321, 554, 1008 |
| BseNI | ACTGG | 4 cut(s) | 519, 1249, 1253, 1502 |
| BseRI | GAGGAG | 3 cut(s) | 150, 153, 344 |
| BseSI | GKGCMC | 5 cut(s) | 468, 974, 1092, 1188, 1474 |
| BseX3I | CGGCCG | 1 cut(s) | 1229 |
| BseYI | CCCAGC | 5 cut(s) | 88, 461, 648, 656, 684 |
| Bsh1285I | CGRYCG | 2 cut(s) | 1205, 1232 |
| BshNI | GGYRCC | 1 cut(s) | 810 |
| BsiEI | CGRYCG | 2 cut(s) | 1205, 1232 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1509 |
| BsiHKCI | CYCGRG | 3 cut(s) | 286, 728, 1187 |
| BsiSI | CCGG | 4 cut(s) | 889, 997, 1135, 1188 |
| BsiWI | CGTACG | 1 cut(s) | 1041 |
| BslFI | GGGAC | 2 cut(s) | 1014, 1040 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 361, 461, 473, 718, 882, 1063, 1064, 1134, 1194 |
| BsmAI | GTCTC | 2 cut(s) | 82, 356 |
| BsmBI | CGTCTC | 1 cut(s) | 82 |
| BsmFI | GGGAC | 2 cut(s) | 1014, 1040 |
| BsmI | GAATGC | 1 cut(s) | 1279 |
| Bso31I | GGTCTC | 1 cut(s) | 356 |
| BsoBI | CYCGRG | 3 cut(s) | 286, 728, 1187 |
| Bsp120I | GGGCCC | 2 cut(s) | 464, 970 |
| Bsp1286I | GDGCHC | 8 cut(s) | 468, 735, 974, 1023, 1092, 1188, 1474, 1509 |
| Bsp143I | GATC | 3 cut(s) | 115, 389, 846 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1017 |
| Bsp19I | CCATGG | 1 cut(s) | 1458 |
| BspCNI | CTCAG | 4 cut(s) | 190, 320, 553, 1009 |
| BspLI | GGNNCC | 8 cut(s) | 6, 466, 812, 887, 972, 973, 995, 1199 |
| BspPI | GGATC | 1 cut(s) | 854 |
| BspQI | GCTCTTC | 2 cut(s) | 335, 456 |
| BspT107I | GGYRCC | 1 cut(s) | 810 |
| BspTNI | GGTCTC | 1 cut(s) | 356 |
| BsrDI | GCAATG | 2 cut(s) | 352, 1422 |
| BsrFI | RCCGGY | 1 cut(s) | 1134 |
| BsrI | ACTGG | 4 cut(s) | 519, 1249, 1253, 1502 |
| BssAI | RCCGGY | 1 cut(s) | 1134 |
| BssMI | GATC | 3 cut(s) | 115, 389, 846 |
| BssNI | GRCGYC | 3 cut(s) | 811, 934, 1003 |
| BssSI | CACGAG | 1 cut(s) | 983 |
| BssT1I | CCWWGG | 2 cut(s) | 1121, 1458 |
| Bst2BI | CACGAG | 1 cut(s) | 983 |
| Bst2UI | CCWGG | 5 cut(s) | 816, 903, 930, 1209, 1218 |
| Bst6I | CTCTTC | 5 cut(s) | 335, 456, 917, 983, 1229 |
| BstACI | GRCGYC | 3 cut(s) | 811, 934, 1003 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 760 |
| BstBAI | YACGTR | 1 cut(s) | 827 |
| BstC8I | GCNNGC | 7 cut(s) | 279, 792, 899, 1136, 1262, 1371, 1452 |
| BstDEI | CTNAG | 6 cut(s) | 198, 264, 307, 540, 1017, 1180 |
| BstDSI | CCRYGG | 2 cut(s) | 478, 1458 |
| BstF5I | GGATG | 3 cut(s) | 34, 504, 1156 |
| BstH2I | RGCGCY | 3 cut(s) | 227, 337, 814 |
| BstHHI | GCGC | 3 cut(s) | 226, 336, 813 |
| BstKTI | GATC | 3 cut(s) | 118, 392, 849 |
| BstMAI | GTCTC | 2 cut(s) | 82, 356 |
| BstMBI | GATC | 3 cut(s) | 115, 389, 846 |
| BstMCI | CGRYCG | 2 cut(s) | 1205, 1232 |
| BstNI | CCWGG | 5 cut(s) | 816, 903, 930, 1209, 1218 |
| BstSCI | CCNGG | 9 cut(s) | 814, 888, 901, 928, 996, 1186, 1187, 1207, 1216 |
| BstSFI | CTRYAG | 1 cut(s) | 258 |
| BstSLI | GKGCMC | 5 cut(s) | 468, 974, 1092, 1188, 1474 |
| BstV2I | GAAGAC | 1 cut(s) | 1024 |
| BstX2I | RGATCY | 1 cut(s) | 389 |
| BstYI | RGATCY | 1 cut(s) | 389 |
| BstZI | CGGCCG | 1 cut(s) | 1229 |
| BsuI | GTATCC | 2 cut(s) | 883, 967 |
| BtgI | CCRYGG | 2 cut(s) | 478, 1458 |
| BtgZI | GCGATG | 2 cut(s) | 37, 112 |
| BtsCI | GGATG | 3 cut(s) | 34, 504, 1156 |
| BtsI | GCAGTG | 1 cut(s) | 60 |
| BtsIMutI | CAGTG | 4 cut(s) | 60, 108, 1260, 1509 |
| Cac8I | GCNNGC | 7 cut(s) | 279, 792, 899, 1136, 1262, 1371, 1452 |
| CaiI | CAGNNNCTG | 1 cut(s) | 428 |
| CfoI | GCGC | 3 cut(s) | 226, 336, 813 |
| Cfr10I | RCCGGY | 1 cut(s) | 1134 |
| Cfr9I | CCCGGG | 1 cut(s) | 1187 |
| CseI | GACGC | 5 cut(s) | 408, 786, 923, 1011, 1018 |
| Csp6I | GTAC | 3 cut(s) | 268, 1042, 1242 |
| CviAII | CATG | 3 cut(s) | 140, 760, 1459 |
| CviQI | GTAC | 3 cut(s) | 268, 1042, 1242 |
| DdeI | CTNAG | 6 cut(s) | 198, 264, 307, 540, 1017, 1180 |
| DinI | GGCGCC | 1 cut(s) | 812 |
| DpnI | GATC | 3 cut(s) | 117, 391, 848 |
| DpnII | GATC | 3 cut(s) | 115, 389, 846 |
| DraI | TTTAAA | 2 cut(s) | 1360, 1398 |
| EaeI | YGGCCR | 2 cut(s) | 481, 1229 |
| EagI | CGGCCG | 1 cut(s) | 1229 |
| Eam1104I | CTCTTC | 5 cut(s) | 335, 456, 917, 983, 1229 |
| EarI | CTCTTC | 5 cut(s) | 335, 456, 917, 983, 1229 |
| EciI | GGCGGA | 3 cut(s) | 70, 396, 865 |
| EclXI | CGGCCG | 1 cut(s) | 1229 |
| Eco130I | CCWWGG | 2 cut(s) | 1121, 1458 |
| Eco147I | AGGCCT | 1 cut(s) | 722 |
| Eco24I | GRGCYC | 4 cut(s) | 468, 735, 974, 1023 |
| Eco31I | GGTCTC | 1 cut(s) | 356 |
| Eco47I | GGWCC | 1 cut(s) | 4 |
| Eco47III | AGCGCT | 2 cut(s) | 225, 335 |
| Eco52I | CGGCCG | 1 cut(s) | 1229 |
| Eco57I | CTGAAG | 2 cut(s) | 132, 1314 |
| Eco88I | CYCGRG | 3 cut(s) | 286, 728, 1187 |
| EcoO109I | RGGNCCY | 2 cut(s) | 465, 971 |
| EcoRII | CCWGG | 5 cut(s) | 814, 901, 928, 1207, 1216 |
| EcoT14I | CCWWGG | 2 cut(s) | 1121, 1458 |
| EcoT22I | ATGCAT | 1 cut(s) | 1279 |
| EcoT38I | GRGCYC | 4 cut(s) | 468, 735, 974, 1023 |
| EgeI | GGCGCC | 1 cut(s) | 812 |
| EheI | GGCGCC | 1 cut(s) | 812 |
| ErhI | CCWWGG | 2 cut(s) | 1121, 1458 |
| Esp3I | CGTCTC | 1 cut(s) | 82 |
| FaeI | CATG | 3 cut(s) | 143, 763, 1462 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1016, 1048 |
| FaqI | GGGAC | 2 cut(s) | 1014, 1040 |
| FatI | CATG | 3 cut(s) | 139, 759, 1458 |
| FauI | CCCGC | 2 cut(s) | 906, 1188 |
| FokI | GGATG | 3 cut(s) | 21, 491, 1163 |
| FriOI | GRGCYC | 4 cut(s) | 468, 735, 974, 1023 |
| FseI | GGCCGGCC | 1 cut(s) | 1138 |
| FspBI | CTAG | 2 cut(s) | 246, 387 |
| GlaI | GCGC | 3 cut(s) | 225, 335, 812 |
| GsaI | CCCAGC | 5 cut(s) | 92, 465, 652, 660, 688 |
| GsuI | CTGGAG | 2 cut(s) | 560, 596 |
| HaeII | RGCGCY | 3 cut(s) | 227, 337, 814 |
| HapII | CCGG | 4 cut(s) | 889, 997, 1135, 1188 |
| HgaI | GACGC | 5 cut(s) | 408, 786, 923, 1011, 1018 |
| HhaI | GCGC | 3 cut(s) | 226, 336, 813 |
| Hin1I | GRCGYC | 3 cut(s) | 811, 934, 1003 |
| Hin1II | CATG | 3 cut(s) | 143, 763, 1462 |
| Hin6I | GCGC | 3 cut(s) | 224, 334, 811 |
| HinP1I | GCGC | 3 cut(s) | 224, 334, 811 |
| HincII | GTYRAC | 2 cut(s) | 318, 784 |
| HindII | GTYRAC | 2 cut(s) | 318, 784 |
| HindIII | AAGCTT | 1 cut(s) | 380 |
| HinfI | GANTC | 1 cut(s) | 1304 |
| HpaII | CCGG | 4 cut(s) | 889, 997, 1135, 1188 |
| HphI | GGTGA | 2 cut(s) | 176, 814 |
| Hpy166II | GTNNAC | 4 cut(s) | 318, 524, 784, 824 |
| Hpy188I | TCNGA | 3 cut(s) | 394, 851, 942 |
| Hpy188III | TCNNGA | 3 cut(s) | 367, 471, 985 |
| Hpy8I | GTNNAC | 4 cut(s) | 318, 524, 784, 824 |
| Hpy99I | CGWCG | 1 cut(s) | 802 |
| HpyAV | CCTTC | 6 cut(s) | 229, 413, 733, 1141, 1242, 1439 |
| HpyCH4IV | ACGT | 2 cut(s) | 826, 1086 |
| HpyCH4V | TGCA | 5 cut(s) | 65, 212, 1277, 1382, 1454 |
| HpyF3I | CTNAG | 6 cut(s) | 198, 264, 307, 540, 1017, 1180 |
| HpySE526I | ACGT | 2 cut(s) | 826, 1086 |
| Hsp92I | GRCGYC | 3 cut(s) | 811, 934, 1003 |
| Hsp92II | CATG | 3 cut(s) | 143, 763, 1462 |
| HspAI | GCGC | 3 cut(s) | 224, 334, 811 |
| KasI | GGCGCC | 1 cut(s) | 810 |
| KroI | GCCGGC | 1 cut(s) | 1134 |
| KroNI | GCCGGC | 1 cut(s) | 1136 |
| Kzo9I | GATC | 3 cut(s) | 115, 389, 846 |
| LguI | GCTCTTC | 2 cut(s) | 335, 456 |
| LmnI | GCTCC | 3 cut(s) | 1067, 1495, 1512 |
| LweI | GCATC | 2 cut(s) | 385, 1141 |
| MaeI | CTAG | 2 cut(s) | 246, 387 |
| MaeII | ACGT | 2 cut(s) | 826, 1086 |
| MaeIII | GTNAC | 1 cut(s) | 1282 |
| MalI | GATC | 3 cut(s) | 117, 391, 848 |
| MboI | GATC | 3 cut(s) | 115, 389, 846 |
| MflI | RGATCY | 1 cut(s) | 389 |
| MhlI | GDGCHC | 8 cut(s) | 468, 735, 974, 1023, 1092, 1188, 1474, 1509 |
| MluCI | AATT | 5 cut(s) | 586, 622, 748, 1355, 1439 |
| Mly113I | GGCGCC | 1 cut(s) | 811 |
| MlyI | GAGTC | 1 cut(s) | 1298 |
| MmeI | TCCRAC | 2 cut(s) | 50, 580 |
| Mph1103I | ATGCAT | 1 cut(s) | 1279 |
| MroNI | GCCGGC | 1 cut(s) | 1134 |
| MroXI | GAANNNNTTC | 3 cut(s) | 534, 672, 1350 |
| MseI | TTAA | 3 cut(s) | 1332, 1359, 1397 |
| MspA1I | CMGCKG | 3 cut(s) | 425, 437, 962 |
| MspI | CCGG | 4 cut(s) | 889, 997, 1135, 1188 |
| MspR9I | CCNGG | 9 cut(s) | 816, 890, 903, 930, 998, 1188, 1189, 1209, 1218 |
| Mva1269I | GAATGC | 1 cut(s) | 1279 |
| MvaI | CCWGG | 5 cut(s) | 816, 903, 930, 1209, 1218 |
| NaeI | GCCGGC | 1 cut(s) | 1136 |
| NarI | GGCGCC | 1 cut(s) | 811 |
| NciI | CCSGG | 4 cut(s) | 890, 998, 1188, 1189 |
| NcoI | CCATGG | 1 cut(s) | 1458 |
| NdeII | GATC | 3 cut(s) | 115, 389, 846 |
| NgoMIV | GCCGGC | 1 cut(s) | 1134 |
| NlaIII | CATG | 3 cut(s) | 143, 763, 1462 |
| NlaIV | GGNNCC | 8 cut(s) | 6, 466, 812, 887, 972, 973, 995, 1199 |
| NmeAIII | GCCGAG | 1 cut(s) | 933 |
| NmuCI | GTSAC | 1 cut(s) | 1282 |
| NsiI | ATGCAT | 1 cut(s) | 1279 |
| PceI | AGGCCT | 1 cut(s) | 722 |
| PciSI | GCTCTTC | 2 cut(s) | 335, 456 |
| PctI | GAATGC | 1 cut(s) | 1279 |
| PdiI | GCCGGC | 1 cut(s) | 1136 |
| PdmI | GAANNNNTTC | 3 cut(s) | 534, 672, 1350 |
| Pfl23II | CGTACG | 1 cut(s) | 1041 |
| PleI | GAGTC | 1 cut(s) | 1298 |
| PluTI | GGCGCC | 1 cut(s) | 814 |
| PpsI | GAGTC | 1 cut(s) | 1298 |
| Ppu21I | YACGTR | 1 cut(s) | 827 |
| Psp6I | CCWGG | 5 cut(s) | 814, 901, 928, 1207, 1216 |
| PspFI | CCCAGC | 5 cut(s) | 88, 461, 648, 656, 684 |
| PspGI | CCWGG | 5 cut(s) | 814, 901, 928, 1207, 1216 |
| PspLI | CGTACG | 1 cut(s) | 1041 |
| PspN4I | GGNNCC | 8 cut(s) | 6, 466, 812, 887, 972, 973, 995, 1199 |
| PspOMI | GGGCCC | 2 cut(s) | 464, 970 |
| PstNI | CAGNNNCTG | 1 cut(s) | 428 |
| PsuI | RGATCY | 1 cut(s) | 389 |
| PvuII | CAGCTG | 1 cut(s) | 425 |
| RigI | GGCCGGCC | 1 cut(s) | 1138 |
| RsaI | GTAC | 3 cut(s) | 269, 1043, 1243 |
| RsaNI | GTAC | 3 cut(s) | 268, 1042, 1242 |
| SapI | GCTCTTC | 2 cut(s) | 335, 456 |
| SaqAI | TTAA | 3 cut(s) | 1332, 1359, 1397 |
| Sau3AI | GATC | 3 cut(s) | 115, 389, 846 |
| ScaI | AGTACT | 1 cut(s) | 1243 |
| SchI | GAGTC | 1 cut(s) | 1298 |
| ScrFI | CCNGG | 9 cut(s) | 816, 890, 903, 930, 998, 1188, 1189, 1209, 1218 |
| SduI | GDGCHC | 8 cut(s) | 468, 735, 974, 1023, 1092, 1188, 1474, 1509 |
| SfaNI | GCATC | 2 cut(s) | 385, 1141 |
| SfcI | CTRYAG | 1 cut(s) | 258 |
| SfiI | GGCCNNNNNGGCC | 1 cut(s) | 978 |
| SfoI | GGCGCC | 1 cut(s) | 812 |
| SinI | GGWCC | 1 cut(s) | 4 |
| SmaI | CCCGGG | 1 cut(s) | 1189 |
| SmiI | ATTTAAAT | 1 cut(s) | 1398 |
| SmlI | CTYRAG | 3 cut(s) | 227, 329, 469 |
| SmoI | CTYRAG | 3 cut(s) | 227, 329, 469 |
| Sse9I | AATT | 5 cut(s) | 586, 622, 748, 1355, 1439 |
| SseBI | AGGCCT | 1 cut(s) | 722 |
| SspDI | GGCGCC | 1 cut(s) | 810 |
| SspMI | CTAG | 2 cut(s) | 246, 387 |
| StuI | AGGCCT | 1 cut(s) | 722 |
| StyD4I | CCNGG | 9 cut(s) | 814, 888, 901, 928, 996, 1186, 1187, 1207, 1216 |
| StyI | CCWWGG | 2 cut(s) | 1121, 1458 |
| SwaI | ATTTAAAT | 1 cut(s) | 1398 |
| TaiI | ACGT | 2 cut(s) | 829, 1089 |
| TasI | AATT | 5 cut(s) | 586, 622, 748, 1355, 1439 |
| TatI | WGTACW | 2 cut(s) | 267, 1241 |
| TauI | GCSGC | 5 cut(s) | 86, 437, 486, 1430, 1501 |
| Tru1I | TTAA | 3 cut(s) | 1332, 1359, 1397 |
| Tru9I | TTAA | 3 cut(s) | 1332, 1359, 1397 |
| TscAI | CASTG | 4 cut(s) | 67, 115, 1260, 1509 |
| TseFI | GTSAC | 1 cut(s) | 1282 |
| Tsp45I | GTSAC | 1 cut(s) | 1282 |
| TspDTI | ATGAA | 1 cut(s) | 1419 |
| TspGWI | ACGGA | 1 cut(s) | 444 |
| TspMI | CCCGGG | 1 cut(s) | 1187 |
| TspRI | CASTG | 4 cut(s) | 67, 115, 1260, 1509 |
| VpaK11BI | GGWCC | 1 cut(s) | 4 |
| XapI | RAATTY | 1 cut(s) | 748 |
| XmaI | CCCGGG | 1 cut(s) | 1187 |
| XmnI | GAANNNNTTC | 3 cut(s) | 534, 672, 1350 |
| XspI | CTAG | 2 cut(s) | 246, 387 |
| ZrmI | AGTACT | 1 cut(s) | 1243 |
| Zsp2I | ATGCAT | 1 cut(s) | 1279 |