Domain in histone families 1 and 5
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G48620 AT3G18035 AT3G18035 |
| fragaria_vesca | FvH4_5g17210 |
| malus_domestica | MD06G1230400.v1.1 MD14G1235000.v1.1 |
| prunus_persica | Prupe.5G231600_v2.0.a1 |
| pyrus_communis | pycom06g20160 pycom14g19600 |
| rosa_chinensis | RchiOBHm_Chr1g0337641 RchiOBHm_Chr7g0178581 |
| rosa_laevigata | RLG00000005435 |
| rosa_multiflora | Rmu_sc0002320.1_g000001 |
| rosa_roxburghii | Rroxscaffold_3G00274790 |
| rosa_rugosa | Rorug06G0418100 |
| rosa_samantha | Rh7AG016800 Rh7BG016300 Rh7CG017000 Rh7DG016900 Rh7DG161800 |
| rosa_wichuraiana | Rw7G001340 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 3 cut(s) | 804, 1099, 1198 |
| AccBSI | CCGCTC | 2 cut(s) | 49, 1260 |
| AccII | CGCG | 5 cut(s) | 477, 820, 996, 1212, 1427 |
| AcoI | YGGCCR | 4 cut(s) | 478, 815, 1213, 1217 |
| AcsI | RAATTY | 1 cut(s) | 1343 |
| AcuI | CTGAAG | 1 cut(s) | 1329 |
| AcyI | GRCGYC | 3 cut(s) | 805, 931, 1100 |
| AfaI | GTAC | 3 cut(s) | 257, 365, 1364 |
| AfeI | AGCGCT | 1 cut(s) | 323 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 349, 458, 459, 470, 872, 1061, 1118, 1275, 1327 |
| AgsI | TTSAA | 5 cut(s) | 98, 328, 1370, 1375, 1502 |
| AjnI | CCWGG | 7 cut(s) | 457, 787, 808, 905, 1222, 1231, 1280 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 639, 671, 681, 713 |
| AleI | CACNNNNGTG | 1 cut(s) | 1049 |
| Alw21I | GWGCWC | 2 cut(s) | 1082, 1399 |
| Alw26I | GTCTC | 1 cut(s) | 67 |
| Alw44I | GTGCAC | 1 cut(s) | 1395 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 425 |
| Ama87I | CYCGRG | 3 cut(s) | 274, 623, 1358 |
| Aor51HI | AGCGCT | 1 cut(s) | 323 |
| ApaLI | GTGCAC | 1 cut(s) | 1395 |
| ApoI | RAATTY | 1 cut(s) | 1343 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 938, 970 |
| AspLEI | GCGC | 7 cut(s) | 324, 807, 1102, 1131, 1212, 1427, 1487 |
| AsuC2I | CCSGG | 4 cut(s) | 866, 887, 1119, 1203 |
| AsuHPI | GGTGA | 5 cut(s) | 46, 109, 164, 302, 332 |
| AsuII | TTCGAA | 1 cut(s) | 1007 |
| AvaI | CYCGRG | 3 cut(s) | 274, 623, 1358 |
| AvaII | GGWCC | 2 cut(s) | 4, 1313 |
| BaeGI | GKGCMC | 3 cut(s) | 1089, 1203, 1399 |
| BanI | GGYRCC | 3 cut(s) | 804, 1099, 1198 |
| BanII | GRGCYC | 1 cut(s) | 744 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1346, 1378 |
| BbsI | GAAGAC | 1 cut(s) | 1021 |
| Bbv12I | GWGCWC | 2 cut(s) | 1082, 1399 |
| BccI | CCATC | 2 cut(s) | 86, 519 |
| BceAI | ACGGC | 4 cut(s) | 44, 225, 456, 1421 |
| BciT130I | CCWGG | 7 cut(s) | 459, 789, 810, 907, 1224, 1233, 1282 |
| BcnI | CCSGG | 4 cut(s) | 866, 887, 1119, 1203 |
| BcoDI | GTCTC | 1 cut(s) | 67 |
| BfaI | CTAG | 1 cut(s) | 761 |
| BfmI | CTRYAG | 1 cut(s) | 246 |
| BfoI | RGCGCY | 4 cut(s) | 325, 808, 1103, 1488 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 440, 1225 |
| BlpI | GCTNAGC | 2 cut(s) | 1014, 1506 |
| BmcAI | AGTACT | 1 cut(s) | 1364 |
| Bme18I | GGWCC | 2 cut(s) | 4, 1313 |
| BmeT110I | CYCGRG | 3 cut(s) | 274, 623, 1358 |
| BmsI | GCATC | 4 cut(s) | 43, 257, 418, 1301 |
| BpiI | GAAGAC | 1 cut(s) | 1021 |
| BpmI | CTGGAG | 1 cut(s) | 861 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 1014, 1506 |
| Bpu14I | TTCGAA | 1 cut(s) | 1007 |
| BpuEI | CTTGAG | 1 cut(s) | 302 |
| BpuMI | CCSGG | 4 cut(s) | 866, 887, 1119, 1203 |
| BsaHI | GRCGYC | 3 cut(s) | 805, 931, 1100 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 67, 97, 136, 166 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 349, 458, 459, 470, 872, 1061, 1118, 1275, 1327 |
| Bse118I | RCCGGY | 1 cut(s) | 1215 |
| BseBI | CCWGG | 7 cut(s) | 459, 789, 810, 907, 1224, 1233, 1282 |
| BseGI | GGATG | 2 cut(s) | 296, 511 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 349, 458, 459, 470, 872, 1061, 1118, 1275, 1327 |
| BseMII | CTCAG | 3 cut(s) | 372, 1005, 1520 |
| BseRI | GAGGAG | 2 cut(s) | 396, 399 |
| BseSI | GKGCMC | 3 cut(s) | 1089, 1203, 1399 |
| BseX3I | CGGCCG | 4 cut(s) | 478, 815, 1213, 1217 |
| BseYI | CCCAGC | 7 cut(s) | 558, 666, 708, 723, 750, 898, 926 |
| Bsh1236I | CGCG | 5 cut(s) | 477, 820, 996, 1212, 1427 |
| Bsh1285I | CGRYCG | 5 cut(s) | 481, 818, 1112, 1216, 1220 |
| BshNI | GGYRCC | 3 cut(s) | 804, 1099, 1198 |
| BsiEI | CGRYCG | 5 cut(s) | 481, 818, 1112, 1216, 1220 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1082, 1399 |
| BsiHKCI | CYCGRG | 3 cut(s) | 274, 623, 1358 |
| BsiSI | CCGG | 6 cut(s) | 284, 866, 886, 1118, 1203, 1216 |
| BslFI | GGGAC | 1 cut(s) | 716 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 349, 458, 459, 470, 872, 1061, 1118, 1275, 1327 |
| BsmAI | GTCTC | 1 cut(s) | 67 |
| BsmBI | CGTCTC | 1 cut(s) | 67 |
| BsmFI | GGGAC | 1 cut(s) | 716 |
| BsmI | GAATGC | 1 cut(s) | 1294 |
| BsoBI | CYCGRG | 3 cut(s) | 274, 623, 1358 |
| Bsp119I | TTCGAA | 1 cut(s) | 1007 |
| Bsp1286I | GDGCHC | 5 cut(s) | 744, 1082, 1089, 1203, 1399 |
| Bsp143I | GATC | 1 cut(s) | 377 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 1014, 1506 |
| Bsp19I | CCATGG | 1 cut(s) | 1473 |
| BspCNI | CTCAG | 3 cut(s) | 373, 1006, 1519 |
| BspFNI | CGCG | 5 cut(s) | 477, 820, 996, 1212, 1427 |
| BspQI | GCTCTTC | 1 cut(s) | 1016 |
| BspT104I | TTCGAA | 1 cut(s) | 1007 |
| BspT107I | GGYRCC | 3 cut(s) | 804, 1099, 1198 |
| BsrBI | CCGCTC | 2 cut(s) | 49, 1260 |
| BsrFI | RCCGGY | 1 cut(s) | 1215 |
| BssAI | RCCGGY | 1 cut(s) | 1215 |
| BssMI | GATC | 1 cut(s) | 377 |
| BssNI | GRCGYC | 3 cut(s) | 805, 931, 1100 |
| BssT1I | CCWWGG | 1 cut(s) | 1473 |
| Bst2UI | CCWGG | 7 cut(s) | 459, 789, 810, 907, 1224, 1233, 1282 |
| Bst4CI | ACNGT | 5 cut(s) | 94, 335, 1084, 1180, 1433 |
| Bst6I | CTCTTC | 3 cut(s) | 794, 980, 1016 |
| BstACI | GRCGYC | 3 cut(s) | 805, 931, 1100 |
| BstBI | TTCGAA | 1 cut(s) | 1007 |
| BstC8I | GCNNGC | 6 cut(s) | 465, 539, 1217, 1277, 1386, 1467 |
| BstDEI | CTNAG | 3 cut(s) | 381, 1014, 1506 |
| BstDSI | CCRYGG | 5 cut(s) | 438, 475, 994, 1269, 1473 |
| BstEII | GGTNACC | 1 cut(s) | 338 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 468 |
| BstF5I | GGATG | 2 cut(s) | 296, 511 |
| BstFNI | CGCG | 5 cut(s) | 477, 820, 996, 1212, 1427 |
| BstH2I | RGCGCY | 4 cut(s) | 325, 808, 1103, 1488 |
| BstHHI | GCGC | 7 cut(s) | 324, 807, 1102, 1131, 1212, 1427, 1487 |
| BstKTI | GATC | 1 cut(s) | 380 |
| BstMAI | GTCTC | 1 cut(s) | 67 |
| BstMBI | GATC | 1 cut(s) | 377 |
| BstMCI | CGRYCG | 5 cut(s) | 481, 818, 1112, 1216, 1220 |
| BstNI | CCWGG | 7 cut(s) | 459, 789, 810, 907, 1224, 1233, 1282 |
| BstPI | GGTNACC | 1 cut(s) | 338 |
| BstSFI | CTRYAG | 1 cut(s) | 246 |
| BstSLI | GKGCMC | 3 cut(s) | 1089, 1203, 1399 |
| BstUI | CGCG | 5 cut(s) | 477, 820, 996, 1212, 1427 |
| BstV2I | GAAGAC | 1 cut(s) | 1021 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1096 |
| BstZI | CGGCCG | 4 cut(s) | 478, 815, 1213, 1217 |
| BtgI | CCRYGG | 5 cut(s) | 438, 475, 994, 1269, 1473 |
| BtgZI | GCGATG | 1 cut(s) | 280 |
| BtsCI | GGATG | 2 cut(s) | 296, 511 |
| BtsIMutI | CAGTG | 3 cut(s) | 340, 1080, 1438 |
| Cac8I | GCNNGC | 6 cut(s) | 465, 539, 1217, 1277, 1386, 1467 |
| CaiI | CAGNNNCTG | 1 cut(s) | 425 |
| CciNI | GCGGCCGC | 1 cut(s) | 478 |
| CfoI | GCGC | 7 cut(s) | 324, 807, 1102, 1131, 1212, 1427, 1487 |
| Cfr10I | RCCGGY | 1 cut(s) | 1215 |
| Cfr42I | CCGCGG | 2 cut(s) | 478, 997 |
| CseI | GACGC | 2 cut(s) | 920, 1015 |
| CsiI | ACCWGGT | 1 cut(s) | 905 |
| Csp6I | GTAC | 3 cut(s) | 256, 364, 1363 |
| CviAII | CATG | 3 cut(s) | 128, 757, 1474 |
| CviQI | GTAC | 3 cut(s) | 256, 364, 1363 |
| DdeI | CTNAG | 3 cut(s) | 381, 1014, 1506 |
| DinI | GGCGCC | 2 cut(s) | 806, 1101 |
| DpnI | GATC | 1 cut(s) | 379 |
| DpnII | GATC | 1 cut(s) | 377 |
| EaeI | YGGCCR | 4 cut(s) | 478, 815, 1213, 1217 |
| EagI | CGGCCG | 4 cut(s) | 478, 815, 1213, 1217 |
| Eam1104I | CTCTTC | 3 cut(s) | 794, 980, 1016 |
| EarI | CTCTTC | 3 cut(s) | 794, 980, 1016 |
| EciI | GGCGGA | 1 cut(s) | 55 |
| EclXI | CGGCCG | 4 cut(s) | 478, 815, 1213, 1217 |
| Eco130I | CCWWGG | 1 cut(s) | 1473 |
| Eco147I | AGGCCT | 1 cut(s) | 1003 |
| Eco24I | GRGCYC | 1 cut(s) | 744 |
| Eco47I | GGWCC | 2 cut(s) | 4, 1313 |
| Eco47III | AGCGCT | 1 cut(s) | 323 |
| Eco52I | CGGCCG | 4 cut(s) | 478, 815, 1213, 1217 |
| Eco57I | CTGAAG | 1 cut(s) | 1329 |
| Eco88I | CYCGRG | 3 cut(s) | 274, 623, 1358 |
| Eco91I | GGTNACC | 1 cut(s) | 338 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 468 |
| EcoO109I | RGGNCCY | 2 cut(s) | 968, 1313 |
| EcoO65I | GGTNACC | 1 cut(s) | 338 |
| EcoRII | CCWGG | 7 cut(s) | 457, 787, 808, 905, 1222, 1231, 1280 |
| EcoT14I | CCWWGG | 1 cut(s) | 1473 |
| EcoT22I | ATGCAT | 1 cut(s) | 1294 |
| EcoT38I | GRGCYC | 1 cut(s) | 744 |
| EgeI | GGCGCC | 2 cut(s) | 806, 1101 |
| EheI | GGCGCC | 2 cut(s) | 806, 1101 |
| ErhI | CCWWGG | 1 cut(s) | 1473 |
| Esp3I | CGTCTC | 1 cut(s) | 67 |
| FaeI | CATG | 3 cut(s) | 131, 760, 1477 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1013, 1045 |
| FaqI | GGGAC | 1 cut(s) | 716 |
| FatI | CATG | 3 cut(s) | 127, 756, 1473 |
| FauI | CCCGC | 2 cut(s) | 94, 989 |
| FokI | GGATG | 2 cut(s) | 283, 498 |
| FriOI | GRGCYC | 1 cut(s) | 744 |
| FseI | GGCCGGCC | 1 cut(s) | 1219 |
| FspBI | CTAG | 1 cut(s) | 761 |
| GlaI | GCGC | 7 cut(s) | 323, 806, 1101, 1130, 1211, 1426, 1486 |
| GsaI | CCCAGC | 7 cut(s) | 562, 670, 712, 727, 754, 902, 930 |
| GsuI | CTGGAG | 1 cut(s) | 861 |
| HaeII | RGCGCY | 4 cut(s) | 325, 808, 1103, 1488 |
| HapII | CCGG | 6 cut(s) | 284, 866, 886, 1118, 1203, 1216 |
| HgaI | GACGC | 2 cut(s) | 920, 1015 |
| HhaI | GCGC | 7 cut(s) | 324, 807, 1102, 1131, 1212, 1427, 1487 |
| Hin1I | GRCGYC | 3 cut(s) | 805, 931, 1100 |
| Hin1II | CATG | 3 cut(s) | 131, 760, 1477 |
| Hin6I | GCGC | 7 cut(s) | 322, 805, 1100, 1129, 1210, 1425, 1485 |
| HinP1I | GCGC | 7 cut(s) | 322, 805, 1100, 1129, 1210, 1425, 1485 |
| HincII | GTYRAC | 1 cut(s) | 306 |
| HindII | GTYRAC | 1 cut(s) | 306 |
| HindIII | AAGCTT | 1 cut(s) | 368 |
| HinfI | GANTC | 5 cut(s) | 289, 307, 448, 619, 774 |
| HpaII | CCGG | 6 cut(s) | 284, 866, 886, 1118, 1203, 1216 |
| HphI | GGTGA | 5 cut(s) | 46, 109, 164, 302, 332 |
| Hpy166II | GTNNAC | 2 cut(s) | 306, 1397 |
| Hpy188I | TCNGA | 7 cut(s) | 156, 382, 508, 618, 773, 796, 965 |
| Hpy188III | TCNNGA | 1 cut(s) | 623 |
| Hpy8I | GTNNAC | 2 cut(s) | 306, 1397 |
| Hpy99I | CGWCG | 1 cut(s) | 785 |
| HpyAV | CCTTC | 7 cut(s) | 217, 916, 1014, 1147, 1257, 1304, 1454 |
| HpyCH4III | ACNGT | 5 cut(s) | 94, 335, 1084, 1180, 1433 |
| HpyCH4V | TGCA | 5 cut(s) | 467, 1067, 1292, 1397, 1469 |
| HpyF3I | CTNAG | 3 cut(s) | 381, 1014, 1506 |
| Hsp92I | GRCGYC | 3 cut(s) | 805, 931, 1100 |
| Hsp92II | CATG | 3 cut(s) | 131, 760, 1477 |
| HspAI | GCGC | 7 cut(s) | 322, 805, 1100, 1129, 1210, 1425, 1485 |
| KasI | GGCGCC | 2 cut(s) | 804, 1099 |
| KroI | GCCGGC | 1 cut(s) | 1215 |
| KroNI | GCCGGC | 1 cut(s) | 1217 |
| KspI | CCGCGG | 2 cut(s) | 478, 997 |
| Kzo9I | GATC | 1 cut(s) | 377 |
| LguI | GCTCTTC | 1 cut(s) | 1016 |
| LmnI | GCTCC | 4 cut(s) | 157, 169, 200, 1527 |
| LweI | GCATC | 4 cut(s) | 43, 257, 418, 1301 |
| MabI | ACCWGGT | 1 cut(s) | 905 |
| MaeI | CTAG | 1 cut(s) | 761 |
| MaeIII | GTNAC | 1 cut(s) | 338 |
| MalI | GATC | 1 cut(s) | 379 |
| MbiI | CCGCTC | 2 cut(s) | 49, 1260 |
| MboI | GATC | 1 cut(s) | 377 |
| MboII | GAAGA | 9 cut(s) | 340, 811, 931, 997, 1021, 1033, 1162, 1169, 1297 |
| MhlI | GDGCHC | 5 cut(s) | 744, 1082, 1089, 1203, 1399 |
| MluCI | AATT | 8 cut(s) | 542, 582, 718, 745, 978, 1343, 1370, 1454 |
| Mly113I | GGCGCC | 2 cut(s) | 805, 1100 |
| MlyI | GAGTC | 3 cut(s) | 283, 301, 768 |
| MmeI | TCCRAC | 5 cut(s) | 50, 613, 774, 826, 943 |
| Mph1103I | ATGCAT | 1 cut(s) | 1294 |
| MroNI | GCCGGC | 1 cut(s) | 1215 |
| MseI | TTAA | 3 cut(s) | 215, 1347, 1412 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1049 |
| MspA1I | CMGCKG | 4 cut(s) | 422, 477, 898, 996 |
| MspI | CCGG | 6 cut(s) | 284, 866, 886, 1118, 1203, 1216 |
| Mva1269I | GAATGC | 1 cut(s) | 1294 |
| MvaI | CCWGG | 7 cut(s) | 459, 789, 810, 907, 1224, 1233, 1282 |
| MvnI | CGCG | 5 cut(s) | 477, 820, 996, 1212, 1427 |
| NaeI | GCCGGC | 1 cut(s) | 1217 |
| NarI | GGCGCC | 2 cut(s) | 805, 1100 |
| NciI | CCSGG | 4 cut(s) | 866, 887, 1119, 1203 |
| NcoI | CCATGG | 1 cut(s) | 1473 |
| NdeII | GATC | 1 cut(s) | 377 |
| NgoMIV | GCCGGC | 1 cut(s) | 1215 |
| NlaIII | CATG | 3 cut(s) | 131, 760, 1477 |
| NmeAIII | GCCGAG | 1 cut(s) | 211 |
| NmuCI | GTSAC | 1 cut(s) | 338 |
| NotI | GCGGCCGC | 1 cut(s) | 478 |
| NsiI | ATGCAT | 1 cut(s) | 1294 |
| NspV | TTCGAA | 1 cut(s) | 1007 |
| OliI | CACNNNNGTG | 1 cut(s) | 1049 |
| PaeR7I | CTCGAG | 2 cut(s) | 623, 1358 |
| PceI | AGGCCT | 1 cut(s) | 1003 |
| PciSI | GCTCTTC | 1 cut(s) | 1016 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 777 |
| PctI | GAATGC | 1 cut(s) | 1294 |
| PdiI | GCCGGC | 1 cut(s) | 1217 |
| PfeI | GAWTC | 2 cut(s) | 448, 619 |
| PleI | GAGTC | 3 cut(s) | 283, 301, 768 |
| PluTI | GGCGCC | 2 cut(s) | 808, 1103 |
| PpsI | GAGTC | 3 cut(s) | 283, 301, 768 |
| PpuMI | RGGWCCY | 1 cut(s) | 1313 |
| Psp5II | RGGWCCY | 1 cut(s) | 1313 |
| Psp6I | CCWGG | 7 cut(s) | 457, 787, 808, 905, 1222, 1231, 1280 |
| PspEI | GGTNACC | 1 cut(s) | 338 |
| PspFI | CCCAGC | 7 cut(s) | 558, 666, 708, 723, 750, 898, 926 |
| PspGI | CCWGG | 7 cut(s) | 457, 787, 808, 905, 1222, 1231, 1280 |
| PspPPI | RGGWCCY | 1 cut(s) | 1313 |
| PspXI | VCTCGAGB | 1 cut(s) | 1358 |
| PstNI | CAGNNNCTG | 1 cut(s) | 425 |
| PvuII | CAGCTG | 1 cut(s) | 422 |
| RigI | GGCCGGCC | 1 cut(s) | 1219 |
| RsaI | GTAC | 3 cut(s) | 257, 365, 1364 |
| RsaNI | GTAC | 3 cut(s) | 256, 364, 1363 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1049 |
| SacII | CCGCGG | 2 cut(s) | 478, 997 |
| SapI | GCTCTTC | 1 cut(s) | 1016 |
| SaqAI | TTAA | 3 cut(s) | 215, 1347, 1412 |
| Sau3AI | GATC | 1 cut(s) | 377 |
| ScaI | AGTACT | 1 cut(s) | 1364 |
| SchI | GAGTC | 3 cut(s) | 283, 301, 768 |
| SduI | GDGCHC | 5 cut(s) | 744, 1082, 1089, 1203, 1399 |
| SexAI | ACCWGGT | 1 cut(s) | 905 |
| SfaNI | GCATC | 4 cut(s) | 43, 257, 418, 1301 |
| SfcI | CTRYAG | 1 cut(s) | 246 |
| SfoI | GGCGCC | 2 cut(s) | 806, 1101 |
| Sfr274I | CTCGAG | 2 cut(s) | 623, 1358 |
| Sfr303I | CCGCGG | 2 cut(s) | 478, 997 |
| SfuI | TTCGAA | 1 cut(s) | 1007 |
| SgrBI | CCGCGG | 2 cut(s) | 478, 997 |
| SinI | GGWCC | 2 cut(s) | 4, 1313 |
| SlaI | CTCGAG | 2 cut(s) | 623, 1358 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1049 |
| SmlI | CTYRAG | 3 cut(s) | 317, 623, 1358 |
| SmoI | CTYRAG | 3 cut(s) | 317, 623, 1358 |
| Sse9I | AATT | 8 cut(s) | 542, 582, 718, 745, 978, 1343, 1370, 1454 |
| SseBI | AGGCCT | 1 cut(s) | 1003 |
| SspDI | GGCGCC | 2 cut(s) | 804, 1099 |
| SspMI | CTAG | 1 cut(s) | 761 |
| StuI | AGGCCT | 1 cut(s) | 1003 |
| StyI | CCWWGG | 1 cut(s) | 1473 |
| TaaI | ACNGT | 5 cut(s) | 94, 335, 1084, 1180, 1433 |
| TaqI | TCGA | 5 cut(s) | 233, 376, 624, 1007, 1359 |
| TasI | AATT | 8 cut(s) | 542, 582, 718, 745, 978, 1343, 1370, 1454 |
| TatI | WGTACW | 2 cut(s) | 255, 1362 |
| TfiI | GAWTC | 2 cut(s) | 448, 619 |
| Tru1I | TTAA | 3 cut(s) | 215, 1347, 1412 |
| Tru9I | TTAA | 3 cut(s) | 215, 1347, 1412 |
| TscAI | CASTG | 3 cut(s) | 340, 1087, 1438 |
| TseFI | GTSAC | 1 cut(s) | 338 |
| Tsp45I | GTSAC | 1 cut(s) | 338 |
| TspDTI | ATGAA | 2 cut(s) | 285, 535 |
| TspGWI | ACGGA | 5 cut(s) | 213, 379, 940, 990, 1026 |
| TspRI | CASTG | 3 cut(s) | 340, 1087, 1438 |
| VneI | GTGCAC | 1 cut(s) | 1395 |
| VpaK11BI | GGWCC | 2 cut(s) | 4, 1313 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 468 |
| XapI | RAATTY | 1 cut(s) | 1343 |
| XhoI | CTCGAG | 2 cut(s) | 623, 1358 |
| XspI | CTAG | 1 cut(s) | 761 |
| ZrmI | AGTACT | 1 cut(s) | 1364 |
| Zsp2I | ATGCAT | 1 cut(s) | 1294 |