DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G20065 AT1G20065 AT1G20065 AT1G20065 AT1G20065 AT3G25940 |
| fragaria_vesca | FvH4_1g24780 |
| malus_domestica | MD08G1010500.v1.1 MD15G1010600.v1.1 |
| prunus_persica | Prupe.6G147400_v2.0.a1 |
| pyrus_communis | pycom08g00890 pycom15g00880 |
| rosa_chinensis | RchiOBHm_Chr2g0124111 |
| rosa_laevigata | RLG00000018781 |
| rosa_multiflora | Rmu_sc0002933.1_g000004 Rmu_sc0008812.1_g000011 |
| rosa_roxburghii | Rroxscaffold_2G00120120 |
| rosa_rugosa | Rorug02G0248600 |
| rosa_samantha | Rh2AG307500 Rh2BG316600 Rh2CG294300 Rh2DG331300 |
| rosa_wichuraiana | Rw2G024790 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccIII | TCCGGA | 1 cut(s) | 125 |
| AciI | CCGC | 1 cut(s) | 19 |
| AcsI | RAATTY | 2 cut(s) | 58, 64 |
| AfaI | GTAC | 1 cut(s) | 189 |
| AgsI | TTSAA | 2 cut(s) | 64, 69 |
| AleI | CACNNNNGTG | 1 cut(s) | 155 |
| Alw21I | GWGCWC | 1 cut(s) | 203 |
| Alw44I | GTGCAC | 1 cut(s) | 199 |
| Aor13HI | TCCGGA | 1 cut(s) | 125 |
| AoxI | GGCC | 1 cut(s) | 16 |
| ApaLI | GTGCAC | 1 cut(s) | 199 |
| ApoI | RAATTY | 2 cut(s) | 58, 64 |
| BaeGI | GKGCMC | 1 cut(s) | 203 |
| Bbv12I | GWGCWC | 1 cut(s) | 203 |
| BccI | CCATC | 1 cut(s) | 183 |
| BfaI | CTAG | 1 cut(s) | 171 |
| BisI | GCNGC | 1 cut(s) | 19 |
| BlsI | GCNGC | 1 cut(s) | 20 |
| BsaWI | WCCGGW | 1 cut(s) | 125 |
| BseAI | TCCGGA | 1 cut(s) | 125 |
| BseSI | GKGCMC | 1 cut(s) | 203 |
| BshFI | GGCC | 1 cut(s) | 18 |
| BsiHKAI | GWGCWC | 1 cut(s) | 203 |
| BsiSI | CCGG | 1 cut(s) | 126 |
| BsnI | GGCC | 1 cut(s) | 18 |
| Bsp1286I | GDGCHC | 1 cut(s) | 203 |
| Bsp13I | TCCGGA | 1 cut(s) | 125 |
| BspACI | CCGC | 1 cut(s) | 19 |
| BspANI | GGCC | 1 cut(s) | 18 |
| BspEI | TCCGGA | 1 cut(s) | 125 |
| Bst6I | CTCTTC | 1 cut(s) | 124 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 93 |
| BstSLI | GKGCMC | 1 cut(s) | 203 |
| BsuRI | GGCC | 1 cut(s) | 18 |
| BtsI | GCAGTG | 1 cut(s) | 150 |
| BtsIMutI | CAGTG | 1 cut(s) | 150 |
| Csp6I | GTAC | 1 cut(s) | 188 |
| CviJI | RGCY | 2 cut(s) | 18, 174 |
| CviKI_1 | RGCY | 2 cut(s) | 18, 174 |
| CviQI | GTAC | 1 cut(s) | 188 |
| Eam1104I | CTCTTC | 1 cut(s) | 124 |
| EarI | CTCTTC | 1 cut(s) | 124 |
| Eco32I | GATATC | 1 cut(s) | 123 |
| EcoRI | GAATTC | 1 cut(s) | 64 |
| EcoRV | GATATC | 1 cut(s) | 123 |
| FaiI | YATR | 3 cut(s) | 7, 78, 195 |
| Fnu4HI | GCNGC | 1 cut(s) | 19 |
| Fsp4HI | GCNGC | 1 cut(s) | 19 |
| FspBI | CTAG | 1 cut(s) | 171 |
| GluI | GCNGC | 1 cut(s) | 19 |
| HaeIII | GGCC | 1 cut(s) | 18 |
| HapII | CCGG | 1 cut(s) | 126 |
| HpaII | CCGG | 1 cut(s) | 126 |
| Hpy166II | GTNNAC | 2 cut(s) | 188, 201 |
| Hpy188III | TCNNGA | 1 cut(s) | 126 |
| Hpy8I | GTNNAC | 2 cut(s) | 188, 201 |
| HpyCH4V | TGCA | 2 cut(s) | 96, 201 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 93 |
| Kpn2I | TCCGGA | 1 cut(s) | 125 |
| LpnPI | CCDG | 2 cut(s) | 116, 139 |
| MaeI | CTAG | 1 cut(s) | 171 |
| MaeIII | GTNAC | 1 cut(s) | 148 |
| MboII | GAAGA | 1 cut(s) | 141 |
| MhlI | GDGCHC | 1 cut(s) | 203 |
| MluCI | AATT | 4 cut(s) | 22, 58, 64, 208 |
| MnlI | CCTC | 1 cut(s) | 99 |
| MroI | TCCGGA | 1 cut(s) | 125 |
| MslI | CAYNNNNRTG | 1 cut(s) | 155 |
| MspI | CCGG | 1 cut(s) | 126 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 93 |
| NmuCI | GTSAC | 1 cut(s) | 148 |
| OliI | CACNNNNGTG | 1 cut(s) | 155 |
| PkrI | GCNGC | 1 cut(s) | 20 |
| RsaI | GTAC | 1 cut(s) | 189 |
| RsaNI | GTAC | 1 cut(s) | 188 |
| RseI | CAYNNNNRTG | 1 cut(s) | 155 |
| SatI | GCNGC | 1 cut(s) | 19 |
| SduI | GDGCHC | 1 cut(s) | 203 |
| SgeI | CNNG | 7 cut(s) | 26, 40, 52, 109, 115, 138, 183 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 155 |
| SmlI | CTYRAG | 1 cut(s) | 12 |
| SmoI | CTYRAG | 1 cut(s) | 12 |
| Sse9I | AATT | 4 cut(s) | 22, 58, 64, 208 |
| SsiI | CCGC | 1 cut(s) | 19 |
| SspMI | CTAG | 1 cut(s) | 171 |
| TasI | AATT | 4 cut(s) | 22, 58, 64, 208 |
| TatI | WGTACW | 1 cut(s) | 187 |
| TauI | GCSGC | 1 cut(s) | 21 |
| TscAI | CASTG | 1 cut(s) | 157 |
| TseFI | GTSAC | 1 cut(s) | 148 |
| Tsp45I | GTSAC | 1 cut(s) | 148 |
| TspRI | CASTG | 1 cut(s) | 157 |
| VneI | GTGCAC | 1 cut(s) | 199 |
| XapI | RAATTY | 2 cut(s) | 58, 64 |
| XspI | CTAG | 1 cut(s) | 171 |