Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0011061

Physical Location & Seq

Genomic Coordinates Reverse (-)

6939141 .. 6941117

Gene Structure 1977 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1099700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1977 bp

ATGGTGATGAGATTGGGATTTGGGCTTGACTTAATGTTGAACAACGATCTTATAGATATGTATGGCAAATGCGGGAGAATGGGGATTGCCCTTGAGGTGTTTGATAGAATGCCTGAGAGAAATGTTGTTTCGTGGACGGCTTTAATGTGTGGATACTTACAGAATGGTAATGCCAAAGGCTCACTGTCTCTATTTAGTCGAATGGGATTTTCGGGAATTAAGCCGAATGAGTTCACCTTTTCGATCAATCTTAAGGCGTCTGGGTTTGTGGGCATTGTTGAGAATGGAATGCAGATTCACAATATGTGCACCAAATCTGGTTTTGAATGGGTTACGGTGGTGAGCAATTCTATCCTCGACATGTATGCGAAATGTGGAAGATTTCGCGAAGCAGCACGAATGTTCGATGTTATGCCAGTTAGGAATCTTATCAGTTGGAACGCGATGATAGCCGGATTCACACTTGAAGGAAATGGGGAGAGTGCTTTGCTCTTATTTAGGAAAATGCAAGGGCTAGGAGAAGTCCCCGACGAATATACGATTACGAGTACGCTGAAAGCTTGCAGTGGTATTGGAGCAGTCCGGCAAGGAAGCCAAATACATTCCTCCTTAATCACAAGAGGATTCCTGTGCTCAGTTCGGACTACTATTGCTGGTGCTCTTGTCGATCTGTACGTAAAATGTGGGCACTTAACTGAAGCTCAGAGGGTATTCGATCAAATTGAACAGAAGAATTTAGTATCCTGGAGTTCCCTTATTCTTGGTTATGCCCAAGAATGCAATCTACTACAAGCCATGGATTTGTTTAGGCAGCTCAGGGTTAGTATCGATCATCGAGTAGATGGGTTTGTTCTCTCAAGCCTTATGGGCGTGTTTGCTGATTTTGCCCTGGTTGAACAAGGTAGGCAAATGCATGCTTTCACCATCAAAATCCCATCTGGTTTAGACATATCAGTAACTAATTCGATTCTGGATATGTATCTCAAGTGTGGGTTAACAGACGAGGCAGAAAGACTGTTTAATGAAACTCCGGCAAGGAATGTAATTTCTTGGACGATTATGATCACAGGCTACGGAAAGCATGGTCTTGGAAGGAAATCTGTACGTCTGTTCCAACAAATGCAATCGGATGACATAGAACCCGATGGGGTGACTTACTTGGCCGTGCTCTCAGCCTGCAGCCATTCTGGACTAATAGAAGAATGCGAAGATTACTTCTCAAGATTGTGTCTCGACAAACGGATCAAACCAATTGTAGAGCATTATGCTTGCATGGTCGATCTCCTTGGCAGAGCCGGACGCGTAAAAGAAGCCAAGAATCTCATCGACAACATGCCTTTGAAACCGAATGTTGGAATACAGCAAACTCTACTTAGTGCTTGTAGAGTACATGGGGACTTGGAAATAGGGAGAGAAGTGGGCGAGACGCTTCTGAAACTGGACAGCAATAACCCGGTCAACTATGTGATGCTGTCAAACATCTACGCTGAGGCCGGCTACTGGAAAGAGTGCGAGAGAATAAGAAAACTGTTTAAGATGAAAGGGTTAAAGAAAGAGGCAGGACGCAGTTGGGTGGAGATCAACAAGGAGGTCTACTTCTTCTACAATGGGGATGAGACACACCTGCTTACGGAAAAGATTCATCAAGTGTTGAAGGAGATGGAAAAGAGAATAAAATCCCAGCTGGGTTATGTTCATGGGGTGAGGTTTGCGCTGCATGACGTGGAAGAGGAGTCGAAGGAGGAGAGCTTGAGATTTCACAGTGAGAAGTTGGCAATCGGGTTGGCATTGGTGTGTGGTGAAATGGAGAAGGGAAACAAAACGATTCGGATTTTCAAGAACTTGAGAGTGTGCGGGGATTGCCATGCTTTTATCAAGGGCTTGTCGAAGGTTTTGAAGGTGGTGTTTCTGGTGAGAGATGCAAATAGGTTTCACAAGTTTGAGGACGGCGTGTGTTCTTGTGGGGATTATTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF167 DYW_deaminase PPR PPR_2 Pkinase

Protein Analysis

659

Amino Acids

74.05

Weight (kDa)

7.76

Isoelectric Point (pI)

33.86

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	40 - 85	1.4e-10	PPR repeat family
PPR_2	PF13041	142 - 188	3.8e-08	PPR repeat family
PPR_2	PF13041	346 - 394	1.3e-10	PPR repeat family
PPR	PF01535	349 - 378	1e-06	PPR repeat
E_motif	PF20431	464 - 526	5.9e-19	E motif
DYW_deaminase	PF14432	563 - 658	1.9e-31	DYW family of nucleic acid deaminases

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011061)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G15130
fragaria_vesca	FvH4_2g36310
malus_domestica	MD08G1120300.v1.1 MD08G1120600.v1.1 MD15G1099700.v1.1
prunus_persica	Prupe.1G454500_v2.0.a1
pyrus_communis	pycom08g10070 pycom08g10090 pycom15g09170
rosa_chinensis	RchiOBHm_Chr6g0305571
rosa_laevigata	RLG00000010876
rosa_multiflora	Rmu_co8434531.1_g000001 Rmu_sc0000841.1_g000001 Rmu_sc0001153.1_g000004 Rmu_sc0033568.1_g000001
rosa_rugosa	Rorug06G0341800
rosa_samantha	Rh6AG453800 Rh6BG447700 Rh6DG454100
rosa_wichuraiana	Rw6G039550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1632
Acc36I	ACCTGC	1 cut(s)	1632
AccI	GTMKAC	1 cut(s)	1593
AccII	CGCG	3 cut(s)	387, 443, 1302
AciI	CCGC	2 cut(s)	72, 1854
AclWI	GGATC	1 cut(s)	1250
AcoI	YGGCCR	1 cut(s)	1161
AcsI	RAATTY	1 cut(s)	733
AcuI	CTGAAG	1 cut(s)	717
AcyI	GRCGYC	1 cut(s)	257
AfaI	GTAC	4 cut(s)	550, 674, 1104, 1389
AfiI	CCNNNNNNNGG	3 cut(s)	1352, 1500, 1630
AflII	CTTAAG	1 cut(s)	251
AflIII	ACRYGT	2 cut(s)	360, 1300
AgsI	TTSAA	9 cut(s)	40, 326, 467, 725, 896, 1342, 1654, 1837, 1897
AjiI	CACGTC	1 cut(s)	1723
AjnI	CCWGG	2 cut(s)	743, 888
AluBI	AGCT	5 cut(s)	560, 701, 814, 1684, 1749
AluI	AGCT	5 cut(s)	560, 701, 814, 1684, 1749
Alw21I	GWGCWC	4 cut(s)	311, 635, 661, 1170
Alw26I	GTCTC	4 cut(s)	192, 1235, 1418, 1610
Alw44I	GTGCAC	1 cut(s)	307
AlwI	GGATC	1 cut(s)	1250
AoxI	GGCC	2 cut(s)	1161, 1491
ApaLI	GTGCAC	1 cut(s)	307
ApeKI	GCWGC	4 cut(s)	392, 811, 1179, 1714
ApoI	RAATTY	1 cut(s)	733
Asp700I	GAANNNNTTC	2 cut(s)	230, 1638
AspLEI	GCGC	1 cut(s)	1714
AsuC2I	CCSGG	1 cut(s)	1454
AsuHPI	GGTGA	8 cut(s)	16, 226, 352, 913, 1162, 1714, 1811, 1924
BaeGI	GKGCMC	2 cut(s)	311, 690
Bbv12I	GWGCWC	4 cut(s)	311, 635, 661, 1170
BbvCI	CCTCAGC	1 cut(s)	1488
BbvI	GCAGC	4 cut(s)	404, 823, 1191, 1701
BccI	CCATC	5 cut(s)	836, 932, 943, 1139, 1654
BceAI	ACGGC	3 cut(s)	153, 1148, 1963
BcgI	CGANNNNNNTGC	2 cut(s)	347, 381
BciT130I	CCWGG	2 cut(s)	745, 890
BciVI	GTATCC	2 cut(s)	146, 751
BclI	TGATCA	1 cut(s)	1062
BcnI	CCSGG	1 cut(s)	1454
BcoDI	GTCTC	4 cut(s)	192, 1235, 1418, 1610
BfaI	CTAG	1 cut(s)	515
BfmI	CTRYAG	1 cut(s)	1177
BfrI	CTTAAG	1 cut(s)	251
BfuAI	ACCTGC	1 cut(s)	1632
BfuI	GTATCC	2 cut(s)	146, 751
BglI	GCCNNNNNGGC	1 cut(s)	867
BisI	GCNGC	4 cut(s)	393, 812, 1180, 1715
BlsI	GCNGC	4 cut(s)	394, 813, 1181, 1716
Bme1390I	CCNGG	3 cut(s)	745, 890, 1454
BmgBI	CACGTC	1 cut(s)	1723
BmrFI	CCNGG	3 cut(s)	745, 890, 1454
BmsI	GCATC	2 cut(s)	1458, 1909
BpmI	CTGGAG	1 cut(s)	766
Bpu10I	CCTNAGC	2 cut(s)	815, 1488
BpuEI	CTTGAG	6 cut(s)	113, 841, 968, 1204, 1771, 1864
BpuMI	CCSGG	1 cut(s)	1454
Bsa29I	ATCGAT	1 cut(s)	828
BsaAI	YACGTR	1 cut(s)	676
BsaBI	GATNNNNATC	2 cut(s)	978, 1061
BsaHI	GRCGYC	1 cut(s)	257
BsaJI	CCNNGG	3 cut(s)	795, 888, 1285
Bsc4I	CCNNNNNNNGG	3 cut(s)	1352, 1500, 1630
Bse118I	RCCGGY	1 cut(s)	1493
Bse1I	ACTGG	3 cut(s)	416, 1443, 1505
Bse8I	GATNNNNATC	2 cut(s)	978, 1061
BseBI	CCWGG	2 cut(s)	745, 890
BseCI	ATCGAT	1 cut(s)	828
BseDI	CCNNGG	3 cut(s)	795, 888, 1285
BseGI	GGATG	2 cut(s)	1135, 1618
BseJI	GATNNNNATC	2 cut(s)	978, 1061
BseLI	CCNNNNNNNGG	3 cut(s)	1352, 1500, 1630
BseMII	CTCAG	6 cut(s)	105, 648, 716, 829, 1185, 1479
BseNI	ACTGG	3 cut(s)	416, 1443, 1505
BseRI	GAGGAG	2 cut(s)	1745, 1757
BseSI	GKGCMC	2 cut(s)	311, 690
BseXI	GCAGC	4 cut(s)	404, 823, 1191, 1701
BseYI	CCCAGC	2 cut(s)	1680, 1684
Bsh1236I	CGCG	3 cut(s)	387, 443, 1302
BshFI	GGCC	2 cut(s)	1163, 1493
BshVI	ATCGAT	1 cut(s)	828
BsiHKAI	GWGCWC	4 cut(s)	311, 635, 661, 1170
BsiSI	CCGG	6 cut(s)	453, 583, 1031, 1296, 1454, 1494
BslFI	GGGAC	2 cut(s)	509, 1409
BslI	CCNNNNNNNGG	3 cut(s)	1352, 1500, 1630
BsmAI	GTCTC	4 cut(s)	192, 1235, 1418, 1610
BsmBI	CGTCTC	1 cut(s)	1418
BsmFI	GGGAC	2 cut(s)	509, 1409
BsmI	GAATGC	4 cut(s)	114, 294, 782, 1208
BsnI	GGCC	2 cut(s)	1163, 1493
Bsp1286I	GDGCHC	5 cut(s)	311, 635, 661, 690, 1170
Bsp143I	GATC	9 cut(s)	46, 243, 667, 715, 829, 1062, 1242, 1279, 1578
Bsp19I	CCATGG	1 cut(s)	795
Bsp68I	TCGCGA	1 cut(s)	387
BspACI	CCGC	2 cut(s)	72, 1854
BspANI	GGCC	2 cut(s)	1163, 1493
BspCNI	CTCAG	6 cut(s)	106, 647, 715, 828, 1184, 1480
BspDI	ATCGAT	1 cut(s)	828
BspFNI	CGCG	3 cut(s)	387, 443, 1302
BspMAI	CTGCAG	1 cut(s)	1181
BspMI	ACCTGC	1 cut(s)	1632
BspPI	GGATC	1 cut(s)	1250
BspTI	CTTAAG	1 cut(s)	251
BsrFI	RCCGGY	1 cut(s)	1493
BsrI	ACTGG	3 cut(s)	416, 1443, 1505
BssAI	RCCGGY	1 cut(s)	1493
BssECI	CCNNGG	3 cut(s)	795, 888, 1285
BssMI	GATC	9 cut(s)	46, 243, 667, 715, 829, 1062, 1242, 1279, 1578
BssNI	GRCGYC	1 cut(s)	257
BssT1I	CCWWGG	2 cut(s)	795, 1285
Bst2UI	CCWGG	2 cut(s)	745, 890
Bst4CI	ACNGT	5 cut(s)	186, 337, 1017, 1530, 1763
Bst6I	CTCTTC	1 cut(s)	1722
BstACI	GRCGYC	1 cut(s)	257
BstAFI	CTTAAG	1 cut(s)	251
BstBAI	YACGTR	1 cut(s)	676
BstC8I	GCNNGC	5 cut(s)	562, 915, 1177, 1270, 1495
BstDEI	CTNAG	7 cut(s)	114, 634, 702, 815, 1171, 1373, 1488
BstDSI	CCRYGG	1 cut(s)	795
BstF5I	GGATG	2 cut(s)	1135, 1618
BstFNI	CGCG	3 cut(s)	387, 443, 1302
BstHHI	GCGC	1 cut(s)	1714
BstKTI	GATC	9 cut(s)	49, 246, 670, 718, 832, 1065, 1245, 1282, 1581
BstMAI	GTCTC	4 cut(s)	192, 1235, 1418, 1610
BstMBI	GATC	9 cut(s)	46, 243, 667, 715, 829, 1062, 1242, 1279, 1578
BstMWI	GCNNNNNNNGC	4 cut(s)	449, 867, 884, 1860
BstNI	CCWGG	2 cut(s)	745, 890
BstNSI	RCATGY	3 cut(s)	364, 917, 1336
BstSCI	CCNGG	3 cut(s)	743, 888, 1452
BstSFI	CTRYAG	1 cut(s)	1177
BstSLI	GKGCMC	2 cut(s)	311, 690
BstSNI	TACGTA	1 cut(s)	676
BstUI	CGCG	3 cut(s)	387, 443, 1302
BstV1I	GCAGC	4 cut(s)	404, 823, 1191, 1701
Bsu15I	ATCGAT	1 cut(s)	828
BsuI	GTATCC	2 cut(s)	146, 751
BsuRI	GGCC	2 cut(s)	1163, 1493
BsuTUI	ATCGAT	1 cut(s)	828
BtgI	CCRYGG	1 cut(s)	795
BtgZI	GCGATG	1 cut(s)	458
BtrI	CACGTC	1 cut(s)	1723
BtsCI	GGATG	2 cut(s)	1135, 1618
BtsI	GCAGTG	1 cut(s)	571
BtsIMutI	CAGTG	3 cut(s)	182, 571, 1768
BtuMI	TCGCGA	1 cut(s)	387
BveI	ACCTGC	1 cut(s)	1632
Cac8I	GCNNGC	5 cut(s)	562, 915, 1177, 1270, 1495
CfoI	GCGC	1 cut(s)	1714
Cfr10I	RCCGGY	1 cut(s)	1493
ClaI	ATCGAT	1 cut(s)	828
CseI	GACGC	4 cut(s)	246, 1308, 1435, 1572
Csp6I	GTAC	4 cut(s)	549, 673, 1103, 1388
CviQI	GTAC	4 cut(s)	549, 673, 1103, 1388
DdeI	CTNAG	7 cut(s)	114, 634, 702, 815, 1171, 1373, 1488
DpnI	GATC	9 cut(s)	48, 245, 669, 717, 831, 1064, 1244, 1281, 1580
DpnII	GATC	9 cut(s)	46, 243, 667, 715, 829, 1062, 1242, 1279, 1578
EaeI	YGGCCR	1 cut(s)	1161
Eam1104I	CTCTTC	1 cut(s)	1722
EarI	CTCTTC	1 cut(s)	1722
Eco105I	TACGTA	1 cut(s)	676
Eco130I	CCWWGG	2 cut(s)	795, 1285
Eco57I	CTGAAG	1 cut(s)	717
EcoRII	CCWGG	2 cut(s)	743, 888
EcoT14I	CCWWGG	2 cut(s)	795, 1285
EcoT22I	ATGCAT	1 cut(s)	915
ErhI	CCWWGG	2 cut(s)	795, 1285
Esp3I	CGTCTC	1 cut(s)	1418
FaqI	GGGAC	2 cut(s)	509, 1409
FauI	CCCGC	2 cut(s)	65, 1847
FbaI	TGATCA	1 cut(s)	1062
FblI	GTMKAC	1 cut(s)	1593
Fnu4HI	GCNGC	4 cut(s)	393, 812, 1180, 1715
FokI	GGATG	2 cut(s)	1142, 1625
Fsp4HI	GCNGC	4 cut(s)	393, 812, 1180, 1715
FspBI	CTAG	1 cut(s)	515
GlaI	GCGC	1 cut(s)	1713
GluI	GCNGC	4 cut(s)	393, 812, 1180, 1715
GsaI	CCCAGC	2 cut(s)	1684, 1688
GsuI	CTGGAG	1 cut(s)	766
HaeIII	GGCC	2 cut(s)	1163, 1493
HapII	CCGG	6 cut(s)	453, 583, 1031, 1296, 1454, 1494
HgaI	GACGC	4 cut(s)	246, 1308, 1435, 1572
HhaI	GCGC	1 cut(s)	1714
Hin1I	GRCGYC	1 cut(s)	257
Hin6I	GCGC	1 cut(s)	1712
HinP1I	GCGC	1 cut(s)	1712
HincII	GTYRAC	2 cut(s)	996, 1459
HindII	GTYRAC	2 cut(s)	996, 1459
HindIII	AAGCTT	1 cut(s)	558
HinfI	GANTC	9 cut(s)	295, 424, 456, 624, 967, 1318, 1639, 1733, 1825
HpaI	GTTAAC	1 cut(s)	996
HpaII	CCGG	6 cut(s)	453, 583, 1031, 1296, 1454, 1494
HphI	GGTGA	8 cut(s)	16, 226, 352, 913, 1162, 1714, 1811, 1924
Hpy166II	GTNNAC	6 cut(s)	135, 234, 309, 996, 1459, 1594
Hpy188I	TCNGA	5 cut(s)	642, 705, 1129, 1434, 1830
Hpy188III	TCNNGA	7 cut(s)	213, 386, 971, 1188, 1221, 1232, 1837
Hpy8I	GTNNAC	6 cut(s)	135, 234, 309, 996, 1459, 1594
Hpy99I	CGWCG	1 cut(s)	533
HpyAV	CCTTC	7 cut(s)	461, 1086, 1648, 1732, 1804, 1882, 1891
HpyCH4III	ACNGT	5 cut(s)	186, 337, 1017, 1530, 1763
HpyCH4IV	ACGT	3 cut(s)	675, 1105, 1722
HpyF10VI	GCNNNNNNNGC	4 cut(s)	449, 867, 884, 1860
HpyF3I	CTNAG	7 cut(s)	114, 634, 702, 815, 1171, 1373, 1488
HpySE526I	ACGT	3 cut(s)	675, 1105, 1722
Hsp92I	GRCGYC	1 cut(s)	257
HspAI	GCGC	1 cut(s)	1712
KroI	GCCGGC	1 cut(s)	1493
KroNI	GCCGGC	1 cut(s)	1495
Ksp22I	TGATCA	1 cut(s)	1062
KspAI	GTTAAC	1 cut(s)	996
Kzo9I	GATC	9 cut(s)	46, 243, 667, 715, 829, 1062, 1242, 1279, 1578
LmnI	GCTCC	1 cut(s)	575
Lsp1109I	GCAGC	4 cut(s)	404, 823, 1191, 1701
LweI	GCATC	2 cut(s)	1458, 1909
MaeI	CTAG	1 cut(s)	515
MaeII	ACGT	3 cut(s)	675, 1105, 1722
MaeIII	GTNAC	3 cut(s)	331, 955, 1150
MalI	GATC	9 cut(s)	48, 245, 669, 717, 831, 1064, 1244, 1281, 1580
MboI	GATC	9 cut(s)	46, 243, 667, 715, 829, 1062, 1242, 1279, 1578
MboII	GAAGA	6 cut(s)	390, 742, 1211, 1220, 1591, 1739
MfeI	CAATTG	1 cut(s)	1251
MhlI	GDGCHC	5 cut(s)	311, 635, 661, 690, 1170
MluCI	AATT	7 cut(s)	216, 346, 720, 733, 961, 1044, 1251
MluI	ACGCGT	1 cut(s)	1300
MlyI	GAGTC	1 cut(s)	1742
MmeI	TCCRAC	3 cut(s)	416, 1138, 1333
Mph1103I	ATGCAT	1 cut(s)	915
MroNI	GCCGGC	1 cut(s)	1493
MroXI	GAANNNNTTC	2 cut(s)	230, 1638
MslI	CAYNNNNRTG	1 cut(s)	1792
MspA1I	CMGCKG	1 cut(s)	1684
MspCI	CTTAAG	1 cut(s)	251
MspI	CCGG	6 cut(s)	453, 583, 1031, 1296, 1454, 1494
MspR9I	CCNGG	3 cut(s)	745, 890, 1454
MunI	CAATTG	1 cut(s)	1251
Mva1269I	GAATGC	4 cut(s)	114, 294, 782, 1208
MvaI	CCWGG	2 cut(s)	745, 890
MvnI	CGCG	3 cut(s)	387, 443, 1302
MwoI	GCNNNNNNNGC	4 cut(s)	449, 867, 884, 1860
NaeI	GCCGGC	1 cut(s)	1495
NciI	CCSGG	1 cut(s)	1454
NcoI	CCATGG	1 cut(s)	795
NdeII	GATC	9 cut(s)	46, 243, 667, 715, 829, 1062, 1242, 1279, 1578
NgoMIV	GCCGGC	1 cut(s)	1493
NmuCI	GTSAC	1 cut(s)	1150
NruI	TCGCGA	1 cut(s)	387
NsiI	ATGCAT	1 cut(s)	915
NspI	RCATGY	3 cut(s)	364, 917, 1336
PaeI	GCATGC	1 cut(s)	917
PaqCI	CACCTGC	1 cut(s)	1632
PciI	ACATGT	1 cut(s)	360
PcsI	WCGNNNNNNNCGW	1 cut(s)	672
PctI	GAATGC	4 cut(s)	114, 294, 782, 1208
PdiI	GCCGGC	1 cut(s)	1495
PdmI	GAANNNNTTC	2 cut(s)	230, 1638
PfeI	GAWTC	8 cut(s)	295, 424, 456, 624, 967, 1318, 1639, 1825
PfoI	TCCNGGA	1 cut(s)	743
PkrI	GCNGC	4 cut(s)	394, 813, 1181, 1716
PleI	GAGTC	1 cut(s)	1741
PpsI	GAGTC	1 cut(s)	1741
Ppu21I	YACGTR	1 cut(s)	676
PscI	ACATGT	1 cut(s)	360
Psp6I	CCWGG	2 cut(s)	743, 888
PspFI	CCCAGC	2 cut(s)	1680, 1684
PspGI	CCWGG	2 cut(s)	743, 888
PstI	CTGCAG	1 cut(s)	1181
PvuII	CAGCTG	1 cut(s)	1684
RruI	TCGCGA	1 cut(s)	387
RsaI	GTAC	4 cut(s)	550, 674, 1104, 1389
RsaNI	GTAC	4 cut(s)	549, 673, 1103, 1388
RseI	CAYNNNNRTG	1 cut(s)	1792
SatI	GCNGC	4 cut(s)	393, 812, 1180, 1715
Sau3AI	GATC	9 cut(s)	46, 243, 667, 715, 829, 1062, 1242, 1279, 1578
SchI	GAGTC	1 cut(s)	1742
ScrFI	CCNGG	3 cut(s)	745, 890, 1454
SduI	GDGCHC	5 cut(s)	311, 635, 661, 690, 1170
SfaNI	GCATC	2 cut(s)	1458, 1909
SfcI	CTRYAG	1 cut(s)	1177
SmiMI	CAYNNNNRTG	1 cut(s)	1792
SmlI	CTYRAG	7 cut(s)	92, 251, 856, 983, 1219, 1750, 1843
SmoI	CTYRAG	7 cut(s)	92, 251, 856, 983, 1219, 1750, 1843
SnaBI	TACGTA	1 cut(s)	676
SphI	GCATGC	1 cut(s)	917
Sse9I	AATT	7 cut(s)	216, 346, 720, 733, 961, 1044, 1251
SsiI	CCGC	2 cut(s)	72, 1854
SspMI	CTAG	1 cut(s)	515
StyD4I	CCNGG	3 cut(s)	743, 888, 1452
StyI	CCWWGG	2 cut(s)	795, 1285
TaaI	ACNGT	5 cut(s)	186, 337, 1017, 1530, 1763
TaiI	ACGT	3 cut(s)	678, 1108, 1725
TasI	AATT	7 cut(s)	216, 346, 720, 733, 961, 1044, 1251
TatI	WGTACW	1 cut(s)	1387
TfiI	GAWTC	8 cut(s)	295, 424, 456, 624, 967, 1318, 1639, 1825
TscAI	CASTG	3 cut(s)	189, 571, 1768
TseFI	GTSAC	1 cut(s)	1150
TseI	GCWGC	4 cut(s)	392, 811, 1179, 1714
Tsp45I	GTSAC	1 cut(s)	1150
TspDTI	ATGAA	4 cut(s)	1038, 1553, 1631, 1685
TspGWI	ACGGA	3 cut(s)	1089, 1255, 1646
TspRI	CASTG	3 cut(s)	189, 571, 1768
Vha464I	CTTAAG	1 cut(s)	251
VneI	GTGCAC	1 cut(s)	307
XapI	RAATTY	1 cut(s)	733
XceI	RCATGY	3 cut(s)	364, 917, 1336
XmiI	GTMKAC	1 cut(s)	1593
XmnI	GAANNNNTTC	2 cut(s)	230, 1638
XspI	CTAG	1 cut(s)	515
Zsp2I	ATGCAT	1 cut(s)	915

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.