Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0011061

Physical Location & Seq

Genomic Coordinates Reverse (-)

5011241 .. 5013301

Gene Structure 2061 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000010876

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2061 bp

ATGAATGAGAGGCAGAGGTTGGCGAATCTCCTGCGGAACTGTTCGAAGAATTTGCTACTTCGTGAGGGATTGCAAGCTCATGGTTCAGTAATGAGAATGGGACTAGGGTTTGATTTGATGTTGAACAATGATCTTATAGATATGTATAGTAAGTGTGGTAAAATGGGGAATGCACGTGAGGTGTTTGATAGAATGCCTGAGAGAAATGTGGTTTCCTGGACTGCTCTAATGTGTGGCTACTTAAACAGCGGCAATGCCAGAGGGTCGTTATCTCTGTTTAGTGAAATGGGATTTTCGGGAGTTAAGCCGAATGAGTACACTCTTTCGACTAATCTCAAGGCGTCTGGGATCTTGGGGATTGCTGATAATGGAATGCAGATACACAGTATGTGCGCTAAGTCTGGTTATGAATGGGCTGCAGTGGTGAGCAATGCTATCCTTGACATGTATGCGAAATGTGGAAGAGTTAGTGAAGCGTTCAGGATGTTCAGTGTTATGCCGGCTAAGAATGTTATTACTTGGAACGCAATGATAGCTGGATACACAGTTGAAGGGAATGGGGAGAGAGCTTTGGTCTTGTTTAGGAAAATGCAAGAGGTGGGAGAAGTTCCCGACGAGTATACGATTACAAGCACACTAAAGGCTTGTAGCGGCCTTGGAGCAGTTCGGCAAGGAAGCCAAATACATTCCTCCTTGATCACAAGGGGGTTCCTGTGTTCAGTTCGGATGACTATTGCAGGTGCTCTTGTTGATATGTATGTGAAGTGCAGGCACTTAACTGAAGCTCAGAGAGTGTTTGATCAAGTTGAACAGAAGAATCTAATATCTTGGAGTGCCCTGATTCTTGGTTATGCCCAAGAATGCAATTTAACACAGGCCATGGAGTTGTTTAGGCAGCTCAGAGCTAGTGTGTGTCATCAAGTTGATGGGTTTGTTCTGTCGAGCCTTATGGGTGTGTTTGCTGATTTTGCTCTAGTAGAACAAGGTAGGCAAATGCATGCTTTCACCACTAAAATCCCATCTGGTTTAGACATATCGGTGCTTAACTCGATTCTGGATATGTATCTCAAGTGTGGTTTGATAGATGAGGCAGAAAGACTTTTCAATGAAACTCCGTTGAGAAATGTAATTTCTTGGACAATTATGATCACCGGGTTTGGAAAGCATGGTCTAGGGAAGAAAGCTGTGCATCTTTTCAACCAAATGCAATCGGAGGAAATAGAACCTGATGGAGTGACTTACCTGGCAGTGCTCTCAGCCTGCAGCCATTCTGGACTAATTCAAGAATGCCAAGAATACTTCTCAAGATTGTGTCGCGACAAAAGGATTAAGCAAACTGTAGAGCATCATGCTTGCATGGTTGATCTCCTTGGTAGAGCAGGAAGATTAAAAGAAGCTAAGAATCTGATCAACAGCATGCTGCTAAAACCAAATATTGGAATATGGCAGACATTGCTTAGTGCTTGTAGAGTACATGGAGATGTGGAGATAGGGAGAGAAGTGGGAGAGATGCTTCTGAGATTGGATGGTGATAACCCGGTCAACTATGTGATGCTGTCAAACATTTATGCAGAGGCCGGCTACTGGAAAGAGTGTGAGAGTATAAGAAAGCTGTTTAAGGGGAAGGGGTTAAAGAAAGATGCAGGACGGAGTTGGGTAGAGATTGACAAGGAGGTCTACTTCTTCTACAATGGAGATAAGAGTCACCCACTTACAGAAAAGATTCATCAAGTATTGAAGGAAATGGAGAACAGAATAAAATCTGAGATCGGCTATGTTCATGGGGTGAGATTTGCACTGCATGACGTAGAGGAGGAGTCAAAAGAAGAGAGCTTGAGAGTTCATAGTGAAAAACTAGCTATCGGGTTGGCATTGGTATGTGGTGAGCTTGAGAAAGGGAACAGAACAATTCGGATCTTCAAGAACTTGAGGGTATGTGGTGATTGCCATGCCTTCATTAAAGGCTTGTCAAAGGTTTTGAAGGTGGTATTTCTTGTGAGAGATGCGAATAGGTTTCACAAGTTTGAGGACGGCGTCTGTTCTTGTCGAGATTATTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF167 DYW_deaminase PPR PPR_2 Pkinase

Protein Analysis

687

Amino Acids

77.06

Weight (kDa)

8.33

Isoelectric Point (pI)

30.31

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	68 - 113	7e-10	PPR repeat family
PPR_2	PF13041	169 - 216	3.2e-11	PPR repeat family
PPR	PF01535	172 - 201	1.2e-06	PPR repeat
PPR_2	PF13041	374 - 422	3.2e-12	PPR repeat family
PPR	PF01535	377 - 405	8.2e-07	PPR repeat
E_motif	PF20431	492 - 554	3.5e-17	E motif
DYW_deaminase	PF14432	591 - 686	9.2e-31	DYW family of nucleic acid deaminases

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011061)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G15130
fragaria_vesca	FvH4_2g36310
malus_domestica	MD08G1120300.v1.1 MD08G1120600.v1.1 MD15G1099700.v1.1
prunus_persica	Prupe.1G454500_v2.0.a1
pyrus_communis	pycom08g10070 pycom08g10090 pycom15g09170
rosa_chinensis	RchiOBHm_Chr6g0305571
rosa_laevigata	RLG00000010876
rosa_multiflora	Rmu_co8434531.1_g000001 Rmu_sc0000841.1_g000001 Rmu_sc0001153.1_g000004 Rmu_sc0033568.1_g000001
rosa_rugosa	Rorug06G0341800
rosa_samantha	Rh6AG453800 Rh6BG447700 Rh6DG454100
rosa_wichuraiana	Rw6G039550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	728
AasI	GACNNNNNNGTC	1 cut(s)	1673
Acc36I	ACCTGC	1 cut(s)	728
AccB7I	CCANNNNNTGG	1 cut(s)	1436
AccI	GTMKAC	2 cut(s)	620, 1677
AccII	CGCG	1 cut(s)	1317
AciI	CCGC	3 cut(s)	34, 249, 651
AclWI	GGATC	2 cut(s)	356, 1922
AcsI	RAATTY	1 cut(s)	49
AcuI	CTGAAG	1 cut(s)	801
AcvI	CACGTG	1 cut(s)	176
AcyI	GRCGYC	2 cut(s)	341, 2034
AfaI	GTAC	2 cut(s)	317, 1473
AfiI	CCNNNNNNNGG	2 cut(s)	1436, 1584
AflIII	ACRYGT	1 cut(s)	444
AgsI	TTSAA	9 cut(s)	124, 551, 809, 1105, 1198, 1283, 1738, 1921, 1981
AjnI	CCWGG	2 cut(s)	215, 1242
Alw21I	GWGCWC	2 cut(s)	745, 1254
AlwI	GGATC	2 cut(s)	356, 1922
AoxI	GGCC	3 cut(s)	652, 876, 1575
ApeKI	GCWGC	4 cut(s)	416, 895, 1263, 1420
ApoI	RAATTY	1 cut(s)	49
Asp700I	GAANNNNTTC	1 cut(s)	1722
AspLEI	GCGC	1 cut(s)	395
AsuC2I	CCSGG	2 cut(s)	1153, 1538
AsuHPI	GGTGA	8 cut(s)	436, 997, 1141, 1541, 1697, 1798, 1895, 1952
AsuII	TTCGAA	1 cut(s)	44
BaeGI	GKGCMC	1 cut(s)	838
BbrPI	CACGTG	1 cut(s)	176
Bbv12I	GWGCWC	2 cut(s)	745, 1254
BbvI	GCAGC	4 cut(s)	403, 907, 1275, 1407
BccI	CCATC	4 cut(s)	920, 1027, 1223, 1520
BceAI	ACGGC	1 cut(s)	2047
BcgI	CGANNNNNNTGC	4 cut(s)	13, 34, 47, 68
BciT130I	CCWGG	2 cut(s)	217, 1244
BciVI	GTATCC	1 cut(s)	533
BclI	TGATCA	4 cut(s)	696, 799, 1146, 1407
BcnI	CCSGG	2 cut(s)	1153, 1538
BfaI	CTAG	5 cut(s)	104, 906, 974, 1172, 1856
BfmI	CTRYAG	3 cut(s)	417, 1261, 1338
BfuAI	ACCTGC	1 cut(s)	728
BfuI	GTATCC	1 cut(s)	533
BisI	GCNGC	6 cut(s)	250, 417, 652, 896, 1264, 1421
BlsI	GCNGC	6 cut(s)	251, 418, 653, 897, 1265, 1422
Bme1390I	CCNGG	4 cut(s)	217, 1153, 1244, 1538
BmiI	GGNNCC	1 cut(s)	710
BmrFI	CCNGG	4 cut(s)	217, 1153, 1244, 1538
BmsI	GCATC	6 cut(s)	1198, 1354, 1500, 1542, 1630, 1993
Bpu14I	TTCGAA	1 cut(s)	44
BpuEI	CTTGAG	6 cut(s)	320, 1052, 1288, 1855, 1910, 1948
BpuMI	CCSGG	2 cut(s)	1153, 1538
BsaAI	YACGTR	1 cut(s)	176
BsaBI	GATNNNNATC	1 cut(s)	1062
BsaHI	GRCGYC	2 cut(s)	341, 2034
BsaJI	CCNNGG	3 cut(s)	655, 879, 1369
Bsc4I	CCNNNNNNNGG	2 cut(s)	1436, 1584
Bse118I	RCCGGY	2 cut(s)	499, 1577
Bse1I	ACTGG	1 cut(s)	1589
Bse3DI	GCAATG	4 cut(s)	259, 436, 534, 1451
Bse8I	GATNNNNATC	1 cut(s)	1062
BseBI	CCWGG	2 cut(s)	217, 1244
BseDI	CCNNGG	3 cut(s)	655, 879, 1369
BseGI	GGATG	3 cut(s)	489, 732, 1531
BseJI	GATNNNNATC	1 cut(s)	1062
BseLI	CCNNNNNNNGG	2 cut(s)	1436, 1584
BseMI	GCAATG	4 cut(s)	259, 436, 534, 1451
BseMII	CTCAG	6 cut(s)	189, 800, 913, 1269, 1508, 1755
BseNI	ACTGG	1 cut(s)	1589
BseRI	GAGGAG	2 cut(s)	1826, 1829
BseSI	GKGCMC	1 cut(s)	838
BseXI	GCAGC	4 cut(s)	403, 907, 1275, 1407
BsgI	GTGCAG	1 cut(s)	787
Bsh1236I	CGCG	1 cut(s)	1317
BshFI	GGCC	3 cut(s)	654, 878, 1577
BsiHKAI	GWGCWC	2 cut(s)	745, 1254
BsiSI	CCGG	4 cut(s)	500, 1152, 1538, 1578
BslFI	GGGAC	1 cut(s)	114
BslI	CCNNNNNNNGG	2 cut(s)	1436, 1584
BsmFI	GGGAC	1 cut(s)	114
BsmI	GAATGC	5 cut(s)	175, 198, 378, 866, 1292
BsnI	GGCC	3 cut(s)	654, 878, 1577
Bsp119I	TTCGAA	1 cut(s)	44
Bsp1286I	GDGCHC	3 cut(s)	745, 838, 1254
Bsp143I	GATC	9 cut(s)	130, 348, 696, 799, 1146, 1363, 1407, 1767, 1914
Bsp19I	CCATGG	1 cut(s)	879
Bsp68I	TCGCGA	1 cut(s)	1317
BspACI	CCGC	3 cut(s)	34, 249, 651
BspANI	GGCC	3 cut(s)	654, 878, 1577
BspCNI	CTCAG	6 cut(s)	190, 799, 912, 1268, 1509, 1756
BspFNI	CGCG	1 cut(s)	1317
BspLI	GGNNCC	1 cut(s)	710
BspMAI	CTGCAG	2 cut(s)	421, 1265
BspMI	ACCTGC	1 cut(s)	728
BspPI	GGATC	2 cut(s)	356, 1922
BspT104I	TTCGAA	1 cut(s)	44
BsrDI	GCAATG	4 cut(s)	259, 436, 534, 1451
BsrFI	RCCGGY	2 cut(s)	499, 1577
BsrI	ACTGG	1 cut(s)	1589
BssAI	RCCGGY	2 cut(s)	499, 1577
BssECI	CCNNGG	3 cut(s)	655, 879, 1369
BssMI	GATC	9 cut(s)	130, 348, 696, 799, 1146, 1363, 1407, 1767, 1914
BssNAI	GTATAC	1 cut(s)	621
BssNI	GRCGYC	2 cut(s)	341, 2034
BssT1I	CCWWGG	3 cut(s)	655, 879, 1369
Bst1107I	GTATAC	1 cut(s)	621
Bst2UI	CCWGG	2 cut(s)	217, 1244
Bst4CI	ACNGT	4 cut(s)	41, 386, 547, 1339
Bst6I	CTCTTC	2 cut(s)	457, 1821
BstACI	GRCGYC	2 cut(s)	341, 2034
BstAPI	GCANNNNNTGC	1 cut(s)	1453
BstBAI	YACGTR	1 cut(s)	176
BstBI	TTCGAA	1 cut(s)	44
BstC8I	GCNNGC	8 cut(s)	75, 501, 770, 999, 1261, 1354, 1418, 1579
BstDSI	CCRYGG	1 cut(s)	879
BstF5I	GGATG	3 cut(s)	489, 732, 1531
BstFNI	CGCG	1 cut(s)	1317
BstHHI	GCGC	1 cut(s)	395
BstKTI	GATC	9 cut(s)	133, 351, 699, 802, 1149, 1366, 1410, 1770, 1917
BstMBI	GATC	9 cut(s)	130, 348, 696, 799, 1146, 1363, 1407, 1767, 1914
BstMWI	GCNNNNNNNGC	3 cut(s)	533, 968, 1453
BstNI	CCWGG	2 cut(s)	217, 1244
BstNSI	RCATGY	3 cut(s)	448, 1001, 1420
BstSCI	CCNGG	4 cut(s)	215, 1151, 1242, 1536
BstSFI	CTRYAG	3 cut(s)	417, 1261, 1338
BstSLI	GKGCMC	1 cut(s)	838
BstUI	CGCG	1 cut(s)	1317
BstV1I	GCAGC	4 cut(s)	403, 907, 1275, 1407
BstX2I	RGATCY	2 cut(s)	348, 1914
BstYI	RGATCY	2 cut(s)	348, 1914
BstZ17I	GTATAC	1 cut(s)	621
BsuI	GTATCC	1 cut(s)	533
BsuRI	GGCC	3 cut(s)	654, 878, 1577
BtgI	CCRYGG	1 cut(s)	879
BtsCI	GGATG	3 cut(s)	489, 732, 1531
BtsI	GCAGTG	3 cut(s)	426, 1254, 1796
BtsIMutI	CAGTG	4 cut(s)	426, 496, 1254, 1796
BtuMI	TCGCGA	1 cut(s)	1317
BveI	ACCTGC	1 cut(s)	728
Cac8I	GCNNGC	8 cut(s)	75, 501, 770, 999, 1261, 1354, 1418, 1579
CfoI	GCGC	1 cut(s)	395
Cfr10I	RCCGGY	2 cut(s)	499, 1577
CseI	GACGC	2 cut(s)	330, 2023
Csp6I	GTAC	2 cut(s)	316, 1472
CviQI	GTAC	2 cut(s)	316, 1472
DpnI	GATC	9 cut(s)	132, 350, 698, 801, 1148, 1365, 1409, 1769, 1916
DpnII	GATC	9 cut(s)	130, 348, 696, 799, 1146, 1363, 1407, 1767, 1914
DrdI	GACNNNNNNGTC	1 cut(s)	1673
DseDI	GACNNNNNNGTC	1 cut(s)	1673
Eam1104I	CTCTTC	2 cut(s)	457, 1821
EarI	CTCTTC	2 cut(s)	457, 1821
Eco130I	CCWWGG	3 cut(s)	655, 879, 1369
Eco57I	CTGAAG	1 cut(s)	801
Eco72I	CACGTG	1 cut(s)	176
EcoRII	CCWGG	2 cut(s)	215, 1242
EcoT14I	CCWWGG	3 cut(s)	655, 879, 1369
EcoT22I	ATGCAT	1 cut(s)	999
ErhI	CCWWGG	3 cut(s)	655, 879, 1369
FaqI	GGGAC	1 cut(s)	114
FbaI	TGATCA	4 cut(s)	696, 799, 1146, 1407
FblI	GTMKAC	2 cut(s)	620, 1677
Fnu4HI	GCNGC	6 cut(s)	250, 417, 652, 896, 1264, 1421
FokI	GGATG	3 cut(s)	496, 739, 1538
Fsp4HI	GCNGC	6 cut(s)	250, 417, 652, 896, 1264, 1421
FspBI	CTAG	5 cut(s)	104, 906, 974, 1172, 1856
GlaI	GCGC	1 cut(s)	394
GluI	GCNGC	6 cut(s)	250, 417, 652, 896, 1264, 1421
HaeIII	GGCC	3 cut(s)	654, 878, 1577
HapII	CCGG	4 cut(s)	500, 1152, 1538, 1578
HgaI	GACGC	2 cut(s)	330, 2023
HhaI	GCGC	1 cut(s)	395
Hin1I	GRCGYC	2 cut(s)	341, 2034
Hin6I	GCGC	1 cut(s)	393
HinP1I	GCGC	1 cut(s)	393
HincII	GTYRAC	1 cut(s)	1543
HindII	GTYRAC	1 cut(s)	1543
HinfI	GANTC	8 cut(s)	25, 817, 841, 1051, 1402, 1702, 1723, 1817
HpaII	CCGG	4 cut(s)	500, 1152, 1538, 1578
HphI	GGTGA	8 cut(s)	436, 997, 1141, 1541, 1697, 1798, 1895, 1952
Hpy166II	GTNNAC	4 cut(s)	318, 621, 1543, 1678
Hpy188I	TCNGA	8 cut(s)	726, 789, 902, 1213, 1407, 1518, 1765, 1914
Hpy8I	GTNNAC	4 cut(s)	318, 621, 1543, 1678
Hpy99I	CGWCG	1 cut(s)	617
HpyAV	CCTTC	5 cut(s)	545, 1618, 1732, 1963, 1975
HpyCH4III	ACNGT	4 cut(s)	41, 386, 547, 1339
HpyCH4IV	ACGT	2 cut(s)	175, 1806
HpyF10VI	GCNNNNNNNGC	3 cut(s)	533, 968, 1453
HpySE526I	ACGT	2 cut(s)	175, 1806
Hsp92I	GRCGYC	2 cut(s)	341, 2034
HspAI	GCGC	1 cut(s)	393
KroI	GCCGGC	2 cut(s)	499, 1577
KroNI	GCCGGC	2 cut(s)	501, 1579
Ksp22I	TGATCA	4 cut(s)	696, 799, 1146, 1407
Kzo9I	GATC	9 cut(s)	130, 348, 696, 799, 1146, 1363, 1407, 1767, 1914
LmnI	GCTCC	1 cut(s)	659
Lsp1109I	GCAGC	4 cut(s)	403, 907, 1275, 1407
LweI	GCATC	6 cut(s)	1198, 1354, 1500, 1542, 1630, 1993
MaeI	CTAG	5 cut(s)	104, 906, 974, 1172, 1856
MaeII	ACGT	2 cut(s)	175, 1806
MaeIII	GTNAC	2 cut(s)	1234, 1703
MalI	GATC	9 cut(s)	132, 350, 698, 801, 1148, 1365, 1409, 1769, 1916
MboI	GATC	9 cut(s)	130, 348, 696, 799, 1146, 1363, 1407, 1767, 1914
MboII	GAAGA	8 cut(s)	58, 474, 826, 1189, 1395, 1675, 1838, 1909
MflI	RGATCY	2 cut(s)	348, 1914
MhlI	GDGCHC	3 cut(s)	745, 838, 1254
MluCI	AATT	6 cut(s)	49, 865, 1128, 1140, 1278, 1908
MlyI	GAGTC	2 cut(s)	1711, 1826
Mph1103I	ATGCAT	1 cut(s)	999
MroNI	GCCGGC	2 cut(s)	499, 1577
MroXI	GAANNNNTTC	1 cut(s)	1722
MslI	CAYNNNNRTG	3 cut(s)	1037, 1479, 1876
MspA1I	CMGCKG	1 cut(s)	249
MspI	CCGG	4 cut(s)	500, 1152, 1538, 1578
MspR9I	CCNGG	4 cut(s)	217, 1153, 1244, 1538
Mva1269I	GAATGC	5 cut(s)	175, 198, 378, 866, 1292
MvaI	CCWGG	2 cut(s)	217, 1244
MvnI	CGCG	1 cut(s)	1317
MwoI	GCNNNNNNNGC	3 cut(s)	533, 968, 1453
NaeI	GCCGGC	2 cut(s)	501, 1579
NciI	CCSGG	2 cut(s)	1153, 1538
NcoI	CCATGG	1 cut(s)	879
NdeII	GATC	9 cut(s)	130, 348, 696, 799, 1146, 1363, 1407, 1767, 1914
NgoMIV	GCCGGC	2 cut(s)	499, 1577
NlaIV	GGNNCC	1 cut(s)	710
NmuCI	GTSAC	2 cut(s)	1234, 1703
NruI	TCGCGA	1 cut(s)	1317
NsiI	ATGCAT	1 cut(s)	999
NspI	RCATGY	3 cut(s)	448, 1001, 1420
NspV	TTCGAA	1 cut(s)	44
PaeI	GCATGC	2 cut(s)	1001, 1420
PaqCI	CACCTGC	1 cut(s)	728
PciI	ACATGT	1 cut(s)	444
PctI	GAATGC	5 cut(s)	175, 198, 378, 866, 1292
PdiI	GCCGGC	2 cut(s)	501, 1579
PdmI	GAANNNNTTC	1 cut(s)	1722
PfeI	GAWTC	6 cut(s)	25, 817, 841, 1051, 1402, 1723
PflFI	GACNNNGTC	1 cut(s)	2033
PflMI	CCANNNNNTGG	1 cut(s)	1436
PfoI	TCCNGGA	1 cut(s)	215
PkrI	GCNGC	6 cut(s)	251, 418, 653, 897, 1265, 1422
PleI	GAGTC	2 cut(s)	1710, 1825
PmaCI	CACGTG	1 cut(s)	176
PmlI	CACGTG	1 cut(s)	176
PpsI	GAGTC	2 cut(s)	1710, 1825
Ppu21I	YACGTR	1 cut(s)	176
PscI	ACATGT	1 cut(s)	444
Psp6I	CCWGG	2 cut(s)	215, 1242
PspCI	CACGTG	1 cut(s)	176
PspGI	CCWGG	2 cut(s)	215, 1242
PspN4I	GGNNCC	1 cut(s)	710
PstI	CTGCAG	2 cut(s)	421, 1265
PsuI	RGATCY	2 cut(s)	348, 1914
PsyI	GACNNNGTC	1 cut(s)	2033
RruI	TCGCGA	1 cut(s)	1317
RsaI	GTAC	2 cut(s)	317, 1473
RsaNI	GTAC	2 cut(s)	316, 1472
RseI	CAYNNNNRTG	3 cut(s)	1037, 1479, 1876
SatI	GCNGC	6 cut(s)	250, 417, 652, 896, 1264, 1421
Sau3AI	GATC	9 cut(s)	130, 348, 696, 799, 1146, 1363, 1407, 1767, 1914
SchI	GAGTC	2 cut(s)	1711, 1826
ScrFI	CCNGG	4 cut(s)	217, 1153, 1244, 1538
SduI	GDGCHC	3 cut(s)	745, 838, 1254
SfaNI	GCATC	6 cut(s)	1198, 1354, 1500, 1542, 1630, 1993
SfcI	CTRYAG	3 cut(s)	417, 1261, 1338
SfuI	TTCGAA	1 cut(s)	44
SmiMI	CAYNNNNRTG	3 cut(s)	1037, 1479, 1876
SmlI	CTYRAG	6 cut(s)	335, 1067, 1303, 1834, 1889, 1927
SmoI	CTYRAG	6 cut(s)	335, 1067, 1303, 1834, 1889, 1927
SphI	GCATGC	2 cut(s)	1001, 1420
Sse9I	AATT	6 cut(s)	49, 865, 1128, 1140, 1278, 1908
SsiI	CCGC	3 cut(s)	34, 249, 651
SspI	AATATT	1 cut(s)	1435
SspMI	CTAG	5 cut(s)	104, 906, 974, 1172, 1856
StyD4I	CCNGG	4 cut(s)	215, 1151, 1242, 1536
StyI	CCWWGG	3 cut(s)	655, 879, 1369
TaaI	ACNGT	4 cut(s)	41, 386, 547, 1339
TaiI	ACGT	2 cut(s)	178, 1809
TaqI	TCGA	5 cut(s)	44, 326, 941, 1049, 2047
TasI	AATT	6 cut(s)	49, 865, 1128, 1140, 1278, 1908
TatI	WGTACW	2 cut(s)	315, 1471
TauI	GCSGC	2 cut(s)	252, 654
TfiI	GAWTC	6 cut(s)	25, 817, 841, 1051, 1402, 1723
TscAI	CASTG	4 cut(s)	426, 496, 1254, 1803
TseFI	GTSAC	2 cut(s)	1234, 1703
TseI	GCWGC	4 cut(s)	416, 895, 1263, 1420
Tsp45I	GTSAC	2 cut(s)	1234, 1703
TspDTI	ATGAA	7 cut(s)	17, 423, 1122, 1715, 1769, 1832, 1945
TspGWI	ACGGA	2 cut(s)	1104, 1663
TspRI	CASTG	4 cut(s)	426, 496, 1254, 1803
Tth111I	GACNNNGTC	1 cut(s)	2033
Van91I	CCANNNNNTGG	1 cut(s)	1436
XapI	RAATTY	1 cut(s)	49
XceI	RCATGY	3 cut(s)	448, 1001, 1420
XmiI	GTMKAC	2 cut(s)	620, 1677
XmnI	GAANNNNTTC	1 cut(s)	1722
XspI	CTAG	5 cut(s)	104, 906, 974, 1172, 1856
Zsp2I	ATGCAT	1 cut(s)	999

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.