MD15G1388600.v1.1

E3 ubiquitin-protein ligase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
OG0012629
Physical Location & Seq
Forward (+)
48099068 .. 48114877
15810 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1388600.v1.1.491

Sequence Viewer

Length: 11058 bp
ATGACAACCCTAAGATCAAACTTGCCGTCGAGGATTCGGCAACTTCTTTCAGCCGACGGTGCTCTCGGGCCATCCATCAAACTCGACTCCGAGCCACCTCCTAAGATCAAAGCCTTTATCAATAAAGTGATACAATGTCCGTTACAAGATATAGCAATACCTCTTTCCGGTTTCCGTTGGGAGTACATTAAGGGTAATTTTCACCATTGGAGGCCGCTTTTTCTGCATTTTGATACATATTTCAAGACATACTTGTCTTGTAGAAATGATCTACTGTTGTCGGATAAAATCTTAGAAGATGATAGTCCGTTTCCAAAGCATGCAGTGCTACAAATTTTGAGAGTGATGCAAACAATTTTAGAAAACTGCAATAACAAGAGTTCATTTGATGGCTTAGAGCATTTCAAGCTCCTGCTTGCATCAACGGATCCCGAGGTCCTTATAGCTGCATTAGAAACTCTCTCCGCACTTGTGAAAATAAATCCCTCCAAGATGCACGTCGGTGGGAAGATGATCGGTTGTGCTTCTGTAAACAGCTATCTCCTGTCTCTGGCACAGGGCTGGGGAAGCAAGGAAGAGGGATTGGGTTTATATTCATGTGTTATGGCAAACGAGACTACCCAAGATGATGGGCTCAATTTGTTCCCATCTGATGTAGAAAATGATTCTGACAAGTTGCAGTGTCGAATAGGTTCTACGCTCTATTTTGAATTGCATGGGAATGCCCAAAGTACAGAGGAGAGCTCTAACAATGTAAATAATTCTTCCAGTTTGGGGGTTATAAACATTCCAGATTTGCATTTGCAAAAGGAGGATGATTTAAAGCTAATGAAACGATATATAGAGGAGTACAGGGTACCTCCTGAACTCCGGTTCTCACTGCTGACAAGAATCAGATATGCTCGTGCCTTCCGTTCTCCGAAAATATGTAGGCTGTACAGCAGGATTTGCCTTCTTGCATTTGTTGTGCTTGTTCAGTCTAGTGATGCCAGTGTAGAACTGAATTCCTTCTTTGCTAATGAGCCAGAGTACACAAATGAACTAATCAGAATTGTGCGGTCCGAAGAATCGGTGTCTGGGACCATCAGAACGCAGGCAATGCTTGCCTTGGGTGCTCAGTTAGCTGCATATTCAGCGTCTCATGAGCGGGCACGAATCCTGAGTGTATCTAGTATCAGTTTTGCTGGGGGAAATCGTATGATACTCCTGAATGTGCTACAGAGAGCTGTTAGATCATTAAAAAACTCCAATGATCCAACTTCTCTTGCTTTTGTTGAAGCACTTCTTCAGTTCTATCTGCTCCATGTGGTTTCATCATCAGCTACGGGGAGCAATATTAGAGGGTCAGGCATGGTACCGACATTCTTGCCACTTTTGGAAGATTCTGATCCTTTGCATTTGCATCTAGTCTGTTTTGCTGTCAAAACTCTACAAAAGCTCATGGATTACAGTAGTTCAGCTGTGTCTCTGTTTAAAGAGTCAGGGGGAGTTGAGCTTTTGTCTCAGAGACTACAGATAGAGGTACACAGAGTTATTGGTTTGGCTGGTGATAATGATAACTCAATGGTTATTGGTGAAAGCTCAAGATACAGTGACAACCAGCTATACTCACAGAAGAGGCTCATCAAAGCTTCATTGAAGGCACTTGGGTCTGCTACATATGGCGCTGGGAATTCCTCCAGAGTGCAACACTCCCATGACAGTTCTTTACCTGCAACTCTTTCTCTGATATTTGGGAATGTGGACAAATTTGGTGGTGACATTTATTACTCTGCAGTGACTGTTTTGAGTGAAACTATCCACAAGGACCCAACTTGCTTTTCTGCTTTGCATGAAATGGGTCTCCCAGATGCATTTATATCCTCAGTTGTAGCTGGCATTCTTCCATCCGCAAAGGCTCTTACTTGTGTACCTAACGGTCTTGGTGCTATTTGTCTTAATGCCAAAGGCTTAGAGGCTGTGAAGGAAAGTTTAGCATTACGCTTTCTTGTTGACATCTTCACGAGCAAGAAATATGTTATGGCAATGAATGAAGCCATTGTTCCTCTGGCAAATGCAGTGGAAGAGCTTTTGCGCCATGTATCTTCGCTAAGAAGCACTGGTGTCGATATCATCCTTGAGATAATTGATAAAATTGCTTCCTTCACCGACAGCCACAATACAGGGCCAGAAGGAAAGGCAAATGGGAGTACTGCTATGGAAATGGATTCTGAAGATAAAGAAAATGAAGGTCGTTGCTGTCTGGTTGATTCTGTAGATTCAGCTGCAGATGGGATCAGTAATGAGCAGTTCATTCAATTATCCATCTTTCATTTGATGATACTGGTCCACAGAACAATGGAGAATTCTGAAACATGTCGGTTGTTTGTCGAGAAGTCAGGAATTGATGCATTACTGAAGCTTCTTCTCCAACCCACTATTGTACAATCATCTGATGGGATGTCTATTGCTTTGCACAGTACTATGGTTTTCAAGGGTTTTACTCAACATCACTCTGCTGCCCTTGCCCGTGCATTTTGCTCCTCCCTTAGGGACCACCTAAAGAAAGCTTTGTCTGGATTTGGGGCAGTTTCAGGATCCTTTCTGCTGGAACCTAGGATGGCATCAGATGGTGGAATTTTTTCTTCTCTGTTTCTTGTTGAGTTCCTCTTGTTTATTGCTGCCTCTAAGGACAACCGCTGGGTAACTGCATTGCTTACGGAATTTGGAAATGGTAGCAAGGATGTTCTTGAAGATATAGGACGTGTCCATCGTGAAGTTTCATGGCAGATTGCTCTTCTAGAAGATACCAAGTCTGATGCGGAGGATGATAATGCTGGTTCTACCACTGAGTCACAACAGTCAGAAACGAATACAAGTGAAACTGAAGAGCAAAGGTTCAACTCTTTTAGGCAGTTCCTTGACCCGTTGCTCAGAAGGAGGACTTCTGGCTGGAGCATTGAATCCCAGTTTCTGGACCTTATTAGCCTATACCGCGACCTTGGTCGCGCCACTAGTTCTCAACAAAGGACAAATTCTGATGGTCCTTCAAATCTTCGGATTGGATCCAGTCATCAATTCCAACATTCTGGGTCTTCAGATGCTGTTGGTCCTCTTAATAAAAAGGAGTATGACCAGCAGAGGTCATATTATACTTCTTGCTGTGACATGGTGAGATCACTTTCTTTTCACATTACCCATCTGTTTCAAGAGATGGGGAAGGTCATGTCGGTTCCTTCTCGTCGACGGGATGATATAGTGAATGTTTCTCCTGCTGCAAAATCTGTGGCTTCTACTTTTGCGTCCATTGCATTTGATCACTTGAACTTCGAAGGGCCTGCTAATTCTTCTGGATCCAAGGATTCCATATCAACAAAATGTCGGTACTTTGGTAAAGTTATTGATTTCATTGATGTAAGTCTACTGGAGAGAGCAGATTCATGTAATGCTGTTTTGCTAAATTGCTTATATGGTCATGGAGTTATCCAGTCAGTTTTGAAGACATTTGTAGCTACCAGTGAATTGCTCTTCACAGTTAGGGCTCCTGCATCCCCCATGGAAACGGATGATGGGAATTCAAAGCAGGATGAAAGGGAAGATATTGACCATTCATGGATTTATGGTCCTTTAGCTAGCTATGGTAAACTTATGGACCACCTAGTGACATCTTCTTTCATTTTATCTCCTTTCACAAAACACTTGCTAGCACAACCCCTGGCAAATGGAAATATACCTTTCCCGCGCGATGCTGAGACCTTTGTAAAGGTCCTCCAGTCCATGGTACTGAAGGCGATTCTTCCTCTTTGGACTCATCCTCAGTTTGTTGATTGTAGTTATGATTTTACTAGTACCGTTATTTCTATAATCAGGCATGTATACTCTGGGGTTGAAGTGAAGACTGTTAGTAGCAGCAACACTGCCCGTATTACTGGCCCCCCTCCTAATGAGACAACTATTTCAATGATTGTGGAGATGGGCTTTACCAGGTCCAGGGCAGAAGAAGCTCTGAGGCAAGTTGGATCAAATAGTGTGGAGTTGGCAATGGAGTGGTTGTTTTCCCATCAAGAAGAGACTGAAGAAGACAATGAACTTGCTCGGGCACTTGCCATGTCTTTGGGTAATGAATCAGACACTAAGGAAGCTGTTGCAAATGAGAATACTCAGCAGCTTGAAGAAGAGATAGTCCAACTTCCTCCTGTTGAGGAGTTGTTATCTACATGTGCAAAGCTTCTGCAGATGAAGGAACCTCTAGCTTTTCCAGTTCGAGACCTGCTAGTAATGATATGCTCCCAAAATGATGGTCAATATCGGCCTAATATCATCTCTTTCATTGTTGATCAGATTAAAGAATCTAGTTTATGTTTTGACAGTGGAAAAAGTACTTTGCTATCTGCTCTTTTTCACGTTCTTGCTTTAATTCTTCAAGAAGACACAATTGCACGAGAACTTGCCTCGAAGAATGGTCTCGTGAAAGTTGCATCAGACCTACTCTTCCAGTGGGATTCTGGTTCAGTTGGCAGGGAGAAACATGAAGTTCCAAAGTGGGCAACAACAGCTTTTCTTGCTGTTGATCGGCTGTTGCAGGTGGATCAAAAACTGAACCCTGAAATTGCAGAACAGTTGAAGAAGGATGGTATCAGTAGCCACCAAACACCACTTAGCATTGATGAGAACAAGCAAAATAAGTTGCAGTCTGCATTGGGATTATCTTCAAAGCATATAGAAATGAAAGAGCAGAAGAGGCTTATTGAGATAGCTTGTTCTTGCATCAGGAACCAGCTTGCTTCTGAAACAATGCATGCTGTTCTGCAGCTTTGCTCTACTCTCACAAAAACTCATGCTGTTGCTGTTCAATTTCTTGATGCCGGGGGTTTAAGTTTATTGCTTTCTTTGCCAACAAGTTGCCTCTTTCCTGGGTTTGACAATATTGCTGCTACCATTATCCGTCATGTTCTGGAAGATCCTCAAACTCTTCAGCAGGCAATGGAATTTGAGATAAGGCACAGCCTTGTGGCAGCTGCGAACAGGCATTCTAATGGTAGGGTTTCTCCCCGCAATTTTTTATCAAGTTTAAGTTCTGCAATTTCCCGTGATCCTGTGATATTTATGCGTGCTGCTCAGACTATTTGTCAAGTTGAGATGGTTGGTGAAAGGCCTTACATTGTTTTGCTGAAAGATCGTGAGAAAGATAAAAGCAAGGAAAGGGAAAAAGAGAAGGATAAATCTTTGGATAAAGACAAAACACTAATGGCTGATAGTAAAGCTGCTCTGGGTAATATAAATTCAGTAGCTTCTGGCAATGGACACAGCAAGGTTCATGATTCAAAAAGTGCTAAAGTGCATCGAAAGTACCCCCCTAGTTTTGTCTCTGTGATTGAGCTTCTTCTAGATTCTGTGTGTACTTATGTACCGCCATCTAAGGATAATGTTGTCACTGATGCACCACCTTCAACTGACATGGATATTGATGCTGCTGCTACAAAAGGGAAGGGTAAAGCAATTGCCTCAGTGTCTGAGGATAACAAAACTTGTACCCAAGAAGCTCCTGCATCTCTTGCAAAGGTTGTATTTGTTTTGAAGCTTCTAACTGAGATCTTATCAATGTATGCTTCATCTGCACATGTTCTGCTTCGGAAAGATGCTGAAATTAGCAGTTACAAGGCCCCCAGTCTAAAGGGTCCTACTGCTGTATGCACTGGTGGAATATTTCACCATGTTCTTCATAAGTTTCTTCCATATTCACGCAGTGCCAAGAAGGAAAAGAAAGCAGATGGTGACTGGAGGCACAAATTAGCAAGTAGGGCTAGCCAGTTTTTAGTTGCATCCTGTGTTCGTTCTTCTGAGGCAAGGAAGAGAGTTTTTAATGAGATCAGTTTAGTCTTTAATGAATTTGTAGAATCATGCAATGGTTTCCGGCCACCTAACTACGAAATACAAGCTTTTTGTGATCTACTTAATGATGTTCTGGCTGCCCGTACTCCTACTGGTTCATACATTTCCGCTGAAGCTTCTGTCACTTTTATAGATGTTGGTCTGGTCGGGTCATTGACTCGAACTCTCCAAATGCTGGACTTGGACCATGCTGACTCACCTAAAGTTGTTACTGGTCTTCTCAAAGCTCTTGAGTTGGTAACCAAAGAACATGTTCATTCTGCTGACTCAAATTCTGGTGGTAAGGGTGACAATTCTACCAAACCTCCTGATCATAATCAATCGGGAAGGACAGACACTATTGGTGAGAGATCCCAATCTATGGAAACACCATCCCAGTCCCGCCGTGATTCTGGTCCAGCTGAGCACATTGAGTCTTACAACGCGGTCCAGTCCTTTGGTGGTTCTGAGGCTGTGACGGATGATATGGAACATGACCAAGATCTCGATGGAGGTTTTGCTCCTGCAAATGAAGATGAATATATGCATGAAAACTCGGAGGAAACAAGGGGTCTTGAAAATGGCATTGATACTATGGGTATACGGTTTGAAATTCAACCTCACGAGCAAGAGAATCTTGATGACGATGACGAGGAGGAGGATGAAGATATGTCTGAGGATGATGGAGATGAAGTAGATGATGATGAAGATGATGATGATGAGGAGCATAATGATCTGGAAGATGATGTGCATCACCTACCACATCCTGACACTGACCAAGATGATCATGAGATTGATGATGATGAGTTTGATGAGGAAGTATTAGAGGAAGATGATGAAGAAGATGATGATGAGGAAGATGGAGTTATACTGAGGCTGGAGGAAGGCATAAACGGGATTAATGTTTTCGACCGTATTGAGGTTTTTGGTAGAGATCCTGGTTTTCCTAATGAAGCACTTCAGGTAATGCCAGTTGAAGTTTTTGGTTCTAGACGTCAAGGGCGCACTACTTCTATTTACAGTCTTTTGGGAAGAACTGGCGAGAATGCCACTCCATCAAGGCACCCTCTTCTGGTTGGACCTTTGTCGCTGTCGTCAACCCCCCCTAGACAATCAGAGAATGCCCGTGATATGGTATTACAAGATTTAAACTCAGAGGTCACGTCGTCAAGATTGGATAATATTTTCCGATCACTGAGGAATGGGCGTCATGGACACCGATTGAACTTGTGGATGGATGATAACCAGCAAGTTGGTGGATCAAATCCAAGTTCAGTGCCACAAGGACTTGAGGATTTGCTTGTGTCCCAATTGAGGCGACCCATGGCTGACAAGACACCTGAAGAGAATAAGACAAAAGCAATGGATCCTCAGAACACAGCTGAAGCTTTAGAGTTACAACCACAAACAGGTGTCAGGCCCGAAATTCCCGTTGAGAACAATGTCACTATTGAGAGTGGAAGCCTGCCTCCTCCGGAGACAATTGATGACTCTGGAAATGCTGATTTGAGACCGACTACAGTGAGCGAATCTCTACAAGCAATGGACATGTCTAGCATGCATCCTCAGTCCGTTGAGATGCAGTTTGAACACAATGATGCAGCTGTGAGGGATGTAGAAGCTGTGAGCCAAGAAAGTGGTGGAAGTGGAGCAACTTTAGGGGAGAGCCTTCGTAGCCTTGATGTTGAAATTGGGAGTGCTGATGGTCATGATGATGGAGCAGAGAGGCAAGGTTCTTCTGATAGAATGCCACTTGGTGATTCACAGGCAACTCGAGCAAGAAGAACAAATGTATCTTTTGGGAATTCTGCCACTGTCAGTGCAAGAGATGTTTCTCTACACAGCGTAACTGAAGTGTCTGAAAATTCTAGCCGTGAGGCAGATCAGGAGGGTCCAGCAGCAGAACAGCAACTTAACAGTGACGCCGGTTCTGGGGCAATTGACCCTGCTTTCTTGGATGCCCTTCCTGACGAGTTGCGTGCTGAAGTTCTCTCAGCACAGCAGGGTCAAGCAGCTCCACAGTCAAATGCTGAGCCACAAAATGCTGGAGATATTGATCCTGAATTCCTTGCTGCCCTTCCTCCTGATATCAGAGCAGAAGTTTTAGCCCAACAGCAAGCTCAAAGGCTACATCAGTCTCAGGAACTCGAAGGTCAACCAGTTGAAATGGACACAGTCTCAATAATTGCAACATTTCCTTCAGAGTTGCGTGAAGAAGTTCTCTTGACTTCATCTGACGCTATACTTGCCAATCTTACCCCTGCTCTAGTTGCGGAGGCAAACATGTTACGTGAAAGATTTGCCCATCGATATAATCGTACCCTGTTTGGTATGTATCCTAGAAACCGTAGGGGTGAGACTTCAAGACCAGGTGAAGGCATTGGATCTAGCCTGGACAGGATTGGGGGAAGCATTGCGTCACGTAGATCAATTGGTGCCAAGGTAGTTGAAGCTGAAGGCGCCCCATTAGTTGACACAGAAGCTCTGCATGCAATCATTAGGGTTCTTCGTGTTTTTCAGCCGCTGTATAAAGGTCAGCTGCAGAAACTTCTGTTGAACATATGTGCTCATAATGAAACCCGAAATTCGCTTGTGAAAATTCTCATGGACATGCTAATGCTTGATACAAGAAAGTCCGTTGATCACTCAACAGCTGCTGAGCCCCCGTATCGGCTTTATGCTTGCCAGAGTAATGTGATTTGTTCACGCACTCAATCTGGTGTTCCGCCATTGTTATCTCGGCGAATTCTTGAAACTCTGACTTATTTGGCTCGACATCATCCTAATGTGGCAAAGATTTTGCTTCACTTTTCTGTCCCACAAGAAACAGATAATATCGATCATGGACGTGGAAAAGCTGTGATGGTTGTTGAAGAGACTGGACCAAAGAAAAGTCATCAGGAAGGATATTTATCTATTGCTTTGCTTTTGAGCCTCTTGAATCAACCCCTTTACTTGTTCAGAAGTATAGCTCATCTTGAGCAGCTTCTTAACTTATTGGAGGTCATCATTGATAATGCTGAAAGCCAACCATCTGTCAAATCTGGGGTTGGGGTTTCTGTTTCTGAGCAACCGTCTGCCCCTCAAATTTTGACTTCAGATGCTGAGATGAACACAGAATCTGGTGGGACTGCTGCTGTTGTGGTTGGTATGCCAGATAAGGTGGTTGATTCCTCCAAACCAACAACTTCTGGTGTTGATAGCAAATGTGATACCGCTAGTGTTTTGCTTAACCTTCCACAAGAAGAACTTCGCCTCCTATGCTCACTGCTTGCACGAGAAGGATTGTCAGATAATGCATATACTCTTGTAGCGGAGGTAATGAAGAAGTTGGTGGCAATTGTTCCTACCCATTCAAACCTGTTTATTACTGAGCTAGCAGAGGCTGTTAGAAATTTGACTAGAGCTGCTATGAATGAGTTGCACACATTTGGTGAAACAGTGACAGCACTCCTCAGTACCATGTCTTCTGTTGGAGCTGCAATCTTAAGAGTTCTGCAGGCATTAAGTTCCCTTGTTGCTTCTCTGATGGAGAAAGAGAAGGACGCACAGATTCTTGCAGAAAAGGAGCATACTCTTTCTCTTTCTCAAGTTTGGGACATAAATGCGGCTTTGGAACCTTTGTGGCTGGAGCTGAGCACTTGCATAAGTAAGATAGAGAGCCATTCAGAATCTGCCCCTGATACAATGACTTCATATCGAGCTTCTACATCTAAGCCATCTGGTGTAATTCCTCCGCTGCCTGCCGGCACCCAAAACATCTTACCATACATAGAATCTTTCTTTGTGGTTTGTGAGAAATTGCATCCTGGGCAGCCAGGCCCTGGTAATGACTTTGGTGTTGCTGCAGTTTCTGAGGTTGAAGATGCCAGTACATCTGCTGGCCACCAGAAAACCTCAGGTTCCTCTTTGAAAGTTGATGAAAAACATGTTGCTTTTCTGAAGTTCTCAGAGAAACATAGGAAATTGCTAAATGCTTTTATTCGTCAAAATCCTGGTTTGTTAGAAAAGTCTTTCTCACTCATGCTTAAGGTTCCACGCTTTATCGATTTCGACAACAAGCGTGCTCACTTCAGATCAAAAATAAAGCATCAGCATGATCACCATCATAATCCTTTGAGAATTTCAGTAAGAAGAGCATACATACTTGAAGATTCATATAACCAGCTTCGCATGCGATCAACTCAAGATTTGAAGGGGAGATTGACGGTTCACTTTCAAGGAGAGGAAGGTATTGATGCAGGTGGACTTACTAGAGAATGGTATCAGTTGTTGTCCAGGGTTATTTTTGACAAGGGAGCACTACTATTTACAACTGTGGGCAATGAATCAACATTTCAACCGAATCCGAACTCTGTTTACCAAACAGAACATCTTTCGTATTTCAAGTTTGTTGGGCGAGTGGTTGGGAAAGCACTCTTTGATGGCCAGTTATTGGATGTTCATTTTACTCGATCTTTCTACAAGCATATTTTGGAGGCAAAGGTCACTTATCATGATATAGAGGCCATCGATCCTGATTACTTTAAAAACCTCAAGTGGATGCTTGAGAATGATATTAGTGATGTACTGGACCTTACTTTCAGCATTGATGCTGATGAGGAAAAGCTGATATTATACGAAAGGACAGAAGTAACAGACTATGAACTGATTCCTGGTGGCCGGAACATCAAAGTTACGGAAGAAAATAAGCACCAGTATGTTGATTTAGTTGCGGGGCATCGGTTAACAACCGCTATTCGTCCTCAGATAAATGCTTTTATGAAAGGATTCACTGAACTAGTTGCAAAGGAATTAATATCTATTTTTAACGACAAGGAACTGGAACTTTTGATCAGTGGGCTTCCAGATATTGATTTGGATGACATGAGGGCAAATACCGAATATTCTGGATACAGCCCTGCGTCCCCTGTCATTCAGTGGTTTTGGGAGGTTGCCCAAGGTTTTAGCAAGGAGGATAAAGCCCGTCTATTGCAGTTTGTAACTGGCACCTCTAAGGTGCCTTTAGAAGGTTTTAGTGCACTTCAAGGGATCTCGGGCTCACAGAAATTTCAGATACACAAGGCATATGGAAGTGCAGACCACTTGCCATCTGCACATACTTGCTTCAACCAGTTGGATCTACCGGAGTATCCTTCTAAACAACATCTCGAGGAGAGATTGCTTCTTGCGATTCACGAGGCCAACGAAGGGTTTGGATTTGGTTAA

Protein Analysis

3686

Amino Acids

406.15

Weight (kDa)

5.14

Isoelectric Point (pI)

47.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF908 PF06012 107 - 160 5.3e-11 Domain of Unknown Function (DUF908)
DUF908 PF06012 241 - 410 4.5e-21 Domain of Unknown Function (DUF908)
DUF913 PF06025 473 - 805 2.8e-63 Domain of Unknown Function (DUF913)
UBA PF00627 1307 - 1344 7.3e-09 UBA/TS-N domain
UBA_7 PF22562 1308 - 1354 2.9e-14 UBA-like domain
UBM PF14377 2597 - 2619 1.1e-06 Ubiquitin binding region
UBM PF14377 2630 - 2660 2.3e-11 Ubiquitin binding region
UBM PF14377 2668 - 2699 1e-06 Ubiquitin binding region
HECT PF00632 3374 - 3684 1.5e-97 HECT-domain (ubiquitin-transferase)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 782
AarI CACCTGC 2 cut(s) 4552, 10082
AasI GACNNNNNNGTC 1 cut(s) 253
AatII GACGTC 1 cut(s) 6847
Acc36I ACCTGC 4 cut(s) 1720, 4257, 4552, 10082
Acc65I GGTACC 2 cut(s) 856, 1354
AccB1I GGYRCC 8 cut(s) 856, 1354, 6912, 8285, 8309, 9599, 10838, 10849
AccB7I CCANNNNNTGG 6 cut(s) 2953, 3757, 6046, 6232, 9674, 10285
AccBSI CCGCTC 1 cut(s) 1147
AccI GTMKAC 4 cut(s) 3223, 3400, 3855, 6451
AccII CGCG 5 cut(s) 2976, 2988, 3721, 3723, 6296
AccIII TCCGGA 1 cut(s) 7324
AcoI YGGCCR 4 cut(s) 5894, 9733, 10276, 10510
AcyI GRCGYC 4 cut(s) 6844, 7057, 7773, 8310
AdeI CACNNNGTG 3 cut(s) 3640, 5726, 7607
AflII CTTAAG 2 cut(s) 9337, 9878
AflIII ACRYGT 8 cut(s) 2354, 2743, 4196, 5599, 6121, 7398, 8133, 9778
AhdI GACNNNNNGTC 1 cut(s) 5106
AhlI ACTAGT 3 cut(s) 2993, 3824, 10630
AjiI CACGTC 4 cut(s) 499, 2744, 7014, 8699
AjuI GAANNNNNNNTTGG 2 cut(s) 1804, 1836
AleI CACNNNNGTG 1 cut(s) 501
AloI GAACNNNNNNTCC 2 cut(s) 9090, 9122
Alw21I GWGCWC 9 cut(s) 64, 746, 1117, 6279, 8419, 9491, 9919, 10153, 10873
Alw44I GTGCAC 1 cut(s) 10869
Ama87I CYCGRG 6 cut(s) 65, 431, 4074, 7623, 10885, 11000
Aor13HI TCCGGA 1 cut(s) 7324
ApaLI GTGCAC 1 cut(s) 10869
ArsI GACNNNNNNTTYG 4 cut(s) 11, 43, 4264, 4296
AseI ATTAAT 2 cut(s) 6750, 10646
Asp718I GGTACC 2 cut(s) 856, 1354
AspA2I CCTAGG 1 cut(s) 2594
AspLEI GCGC 6 cut(s) 1667, 2076, 2990, 3723, 6855, 8312
AsuC2I CCSGG 1 cut(s) 4846
AsuII TTCGAA 1 cut(s) 3309
AsuNHI GCTAGC 4 cut(s) 3611, 3682, 5783, 9226
AvaI CYCGRG 6 cut(s) 65, 431, 4074, 7623, 10885, 11000
AvrII CCTAGG 1 cut(s) 2594
AxyI CCTNAGG 2 cut(s) 2528, 9748
BaeGI GKGCMC 3 cut(s) 1153, 4081, 10873
BalI TGGCCA 2 cut(s) 9735, 10278
BamHI GGATCC 5 cut(s) 427, 2576, 3044, 3332, 7216
BanI GGYRCC 8 cut(s) 856, 1354, 6912, 8285, 8309, 9599, 10838, 10849
BanII GRGCYC 5 cut(s) 636, 746, 3523, 8514, 10892
BarI GAAGNNNNNNTAC 2 cut(s) 9301, 9333
BauI CACGAG 7 cut(s) 903, 2002, 4419, 4445, 6473, 9126, 11027
BbsI GAAGAC 7 cut(s) 3066, 3485, 3881, 4065, 4413, 6080, 9309
Bbv12I GWGCWC 9 cut(s) 64, 746, 1117, 6279, 8419, 9491, 9919, 10153, 10873
BceAI ACGGC 3 cut(s) 10, 6240, 7707
BcgI CGANNNNNNTGC 8 cut(s) 1348, 1382, 2086, 2120, 3299, 3333, 7811, 7845
BciVI GTATCC 3 cut(s) 8196, 10736, 10992
BclI TGATCA 7 cut(s) 3295, 4315, 6181, 6634, 8491, 9949, 10683
BcnI CCSGG 1 cut(s) 4846
BcuI ACTAGT 3 cut(s) 2993, 3824, 10630
BfoI RGCGCY 2 cut(s) 1668, 8313
BfrI CTTAAG 2 cut(s) 9337, 9878
BfuAI ACCTGC 4 cut(s) 1720, 4257, 4552, 10082
BfuI GTATCC 3 cut(s) 8196, 10736, 10992
BglII AGATCT 2 cut(s) 5571, 6352
BlnI CCTAGG 1 cut(s) 2594
BlpI GCTNAGC 4 cut(s) 6273, 7881, 8508, 9485
BmcAI AGTACT 3 cut(s) 2191, 2461, 4360
BmeRI GACNNNNNGTC 1 cut(s) 5106
BmeT110I CYCGRG 6 cut(s) 65, 431, 4074, 7623, 10885, 11000
BmgBI CACGTC 4 cut(s) 499, 2744, 7014, 8699
BmrI ACTGGG 3 cut(s) 2941, 5640, 6241
BmtI GCTAGC 4 cut(s) 3615, 3686, 5787, 9230
BmuI ACTGGG 3 cut(s) 2941, 5640, 6241
BoxI GACNNNNGTC 2 cut(s) 2982, 6934
BpiI GAAGAC 7 cut(s) 3066, 3485, 3881, 4065, 4413, 6080, 9309
BplI GAGNNNNNCTC 4 cut(s) 728, 760, 7366, 7398
BpmI CTGGAG 8 cut(s) 1663, 2953, 3425, 3734, 5779, 6749, 7917, 9500
Bpu1102I GCTNAGC 4 cut(s) 6273, 7881, 8508, 9485
Bpu14I TTCGAA 1 cut(s) 3309
BpuEI CTTGAG 9 cut(s) 1567, 2138, 6122, 7160, 8849, 9423, 10020, 10370, 10418
BpuMI CCSGG 1 cut(s) 4846
Bsa29I ATCGAT 4 cut(s) 8158, 8688, 9897, 10362
BsaAI YACGTR 2 cut(s) 8141, 8273
BsaBI GATNNNNATC 7 cut(s) 1386, 6186, 6226, 6600, 7905, 8761, 9954
BsaHI GRCGYC 4 cut(s) 6844, 7057, 7773, 8310
BsaI GGTCTC 5 cut(s) 1847, 3725, 4239, 4448, 7354
BsaWI WCCGGW 4 cut(s) 167, 870, 7324, 10975
BsaXI ACNNNNNCTCC 8 cut(s) 4016, 4046, 6160, 6190, 6528, 6558, 9090, 9120
Bse118I RCCGGY 2 cut(s) 7775, 9596
Bse21I CCTNAGG 2 cut(s) 2528, 9748
Bse8I GATNNNNATC 7 cut(s) 1386, 6186, 6226, 6600, 7905, 8761, 9954
BseAI TCCGGA 1 cut(s) 7324
BseCI ATCGAT 4 cut(s) 8158, 8688, 9897, 10362
BseJI GATNNNNATC 7 cut(s) 1386, 6186, 6226, 6600, 7905, 8761, 9954
BseSI GKGCMC 3 cut(s) 1153, 4081, 10873
BseYI CCCAGC 4 cut(s) 561, 1184, 1667, 2679
BsgI GTGCAG 3 cut(s) 5580, 10929, 10947
Bsh1236I CGCG 5 cut(s) 2976, 2988, 3721, 3723, 6296
Bsh1285I CGRYCG 1 cut(s) 6763
BshNI GGYRCC 8 cut(s) 856, 1354, 6912, 8285, 8309, 9599, 10838, 10849
BshVI ATCGAT 4 cut(s) 8158, 8688, 9897, 10362
BsiEI CGRYCG 1 cut(s) 6763
BsiHKAI GWGCWC 9 cut(s) 64, 746, 1117, 6279, 8419, 9491, 9919, 10153, 10873
BsiHKCI CYCGRG 6 cut(s) 65, 431, 4074, 7623, 10885, 11000
BsiSI CCGG 9 cut(s) 168, 871, 4845, 5893, 7325, 7776, 9597, 10513, 10976
BslFI GGGAC 8 cut(s) 1093, 2546, 6235, 7141, 8651, 8992, 9461, 10741
BsmBI CGTCTC 1 cut(s) 1143
BsmFI GGGAC 8 cut(s) 1093, 2546, 6235, 7141, 8651, 8992, 9461, 10741
BsmI GAATGC 6 cut(s) 727, 1878, 5008, 6901, 6976, 7602
Bso31I GGTCTC 5 cut(s) 1847, 3725, 4239, 4448, 7354
BsoBI CYCGRG 6 cut(s) 65, 431, 4074, 7623, 10885, 11000
Bsp119I TTCGAA 1 cut(s) 3309
Bsp13I TCCGGA 1 cut(s) 7324
Bsp1407I TGTACA 2 cut(s) 936, 2422
Bsp1720I GCTNAGC 4 cut(s) 6273, 7881, 8508, 9485
Bsp19I CCATGG 3 cut(s) 3534, 3756, 7173
BspDI ATCGAT 4 cut(s) 8158, 8688, 9897, 10362
BspEI TCCGGA 1 cut(s) 7324
BspFNI CGCG 5 cut(s) 2976, 2988, 3721, 3723, 6296
BspHI TCATGA 5 cut(s) 1141, 5296, 6637, 7558, 10345
BspMAI CTGCAG 7 cut(s) 1777, 2269, 4215, 4791, 8394, 9351, 9700
BspMI ACCTGC 4 cut(s) 1720, 4257, 4552, 10082
BspOI GCTAGC 4 cut(s) 3615, 3686, 5787, 9230
BspQI GCTCTTC 5 cut(s) 2058, 2781, 2862, 3512, 9979
BspT104I TTCGAA 1 cut(s) 3309
BspT107I GGYRCC 8 cut(s) 856, 1354, 6912, 8285, 8309, 9599, 10838, 10849
BspTI CTTAAG 2 cut(s) 9337, 9878
BspTNI GGTCTC 5 cut(s) 1847, 3725, 4239, 4448, 7354
BsrBI CCGCTC 1 cut(s) 1147
BsrFI RCCGGY 2 cut(s) 7775, 9596
BsrGI TGTACA 2 cut(s) 936, 2422
BssAI RCCGGY 2 cut(s) 7775, 9596
BssNAI GTATAC 2 cut(s) 3856, 6452
BssNI GRCGYC 4 cut(s) 6844, 7057, 7773, 8310
BssSI CACGAG 7 cut(s) 903, 2002, 4419, 4445, 6473, 9126, 11027
BssT1I CCWWGG 9 cut(s) 1107, 2594, 2980, 3336, 3534, 3756, 7173, 8289, 10789
Bst1107I GTATAC 2 cut(s) 3856, 6452
Bst2BI CACGAG 7 cut(s) 903, 2002, 4419, 4445, 6473, 9126, 11027
BstACI GRCGYC 4 cut(s) 6844, 7057, 7773, 8310
BstAFI CTTAAG 2 cut(s) 9337, 9878
BstAPI GCANNNNNTGC 5 cut(s) 325, 948, 1099, 1103, 5534
BstAUI TGTACA 2 cut(s) 936, 2422
BstBAI YACGTR 2 cut(s) 8141, 8273
BstBI TTCGAA 1 cut(s) 3309
BstDSI CCRYGG 3 cut(s) 3534, 3756, 7173
BstEII GGTNACC 1 cut(s) 6109
BstENI CCTNNNNNAGG 2 cut(s) 2527, 10857
BstFNI CGCG 5 cut(s) 2976, 2988, 3721, 3723, 6296
BstH2I RGCGCY 2 cut(s) 1668, 8313
BstHHI GCGC 6 cut(s) 1667, 2076, 2990, 3723, 6855, 8312
BstMCI CGRYCG 1 cut(s) 6763
BstPAI GACNNNNGTC 2 cut(s) 2982, 6934
BstPI GGTNACC 1 cut(s) 6109
BstSLI GKGCMC 3 cut(s) 1153, 4081, 10873
BstUI CGCG 5 cut(s) 2976, 2988, 3721, 3723, 6296
BstV2I GAAGAC 7 cut(s) 3066, 3485, 3881, 4065, 4413, 6080, 9309
BstXI CCANNNNNNTGG 7 cut(s) 629, 3068, 4093, 4277, 6308, 7103, 7487
BstZ17I GTATAC 2 cut(s) 3856, 6452
Bsu15I ATCGAT 4 cut(s) 8158, 8688, 9897, 10362
Bsu36I CCTNAGG 2 cut(s) 2528, 9748
BsuI GTATCC 3 cut(s) 8196, 10736, 10992
BsuTUI ATCGAT 4 cut(s) 8158, 8688, 9897, 10362
BtgI CCRYGG 3 cut(s) 3534, 3756, 7173
BtgZI GCGATG 1 cut(s) 3738
BtrI CACGTC 4 cut(s) 499, 2744, 7014, 8699
BtsI GCAGTG 8 cut(s) 330, 686, 878, 1782, 2064, 3894, 5731, 9116
BveI ACCTGC 4 cut(s) 1720, 4257, 4552, 10082
CciI TCATGA 5 cut(s) 1141, 5296, 6637, 7558, 10345
CfoI GCGC 6 cut(s) 1667, 2076, 2990, 3723, 6855, 8312
Cfr10I RCCGGY 2 cut(s) 7775, 9596
ClaI ATCGAT 4 cut(s) 8158, 8688, 9897, 10362
CpoI CGGWCCG 1 cut(s) 1059
CseI GACGC 8 cut(s) 1125, 3270, 7046, 7781, 8096, 8256, 9404, 10743
CsiI ACCWGGT 2 cut(s) 3962, 8218
CspI CGGWCCG 1 cut(s) 1059
DinI GGCGCC 1 cut(s) 8311
DraI TTTAAA 4 cut(s) 822, 1474, 6999, 10378
DraIII CACNNNGTG 3 cut(s) 3640, 5726, 7607
DrdI GACNNNNNNGTC 1 cut(s) 253
DriI GACNNNNNGTC 1 cut(s) 5106
DseDI GACNNNNNNGTC 1 cut(s) 253
EaeI YGGCCR 4 cut(s) 5894, 9733, 10276, 10510
Eam1105I GACNNNNNGTC 1 cut(s) 5106
EciI GGCGGA 1 cut(s) 8565
Ecl136II GAGCTC 1 cut(s) 744
Eco130I CCWWGG 9 cut(s) 1107, 2594, 2980, 3336, 3534, 3756, 7173, 8289, 10789
Eco147I AGGCCT 1 cut(s) 5134
Eco24I GRGCYC 5 cut(s) 636, 746, 3523, 8514, 10892
Eco31I GGTCTC 5 cut(s) 1847, 3725, 4239, 4448, 7354
Eco32I GATATC 2 cut(s) 2110, 7939
Eco53kI GAGCTC 1 cut(s) 744
Eco81I CCTNAGG 2 cut(s) 2528, 9748
Eco88I CYCGRG 6 cut(s) 65, 431, 4074, 7623, 10885, 11000
Eco91I GGTNACC 1 cut(s) 6109
EcoICRI GAGCTC 1 cut(s) 744
EcoNI CCTNNNNNAGG 2 cut(s) 2527, 10857
EcoO109I RGGNCCY 7 cut(s) 436, 1807, 3314, 3745, 5641, 5657, 9671
EcoO65I GGTNACC 1 cut(s) 6109
EcoRI GAATTC 7 cut(s) 1003, 1672, 2344, 3553, 7654, 7913, 8595
EcoRV GATATC 2 cut(s) 2110, 7939
EcoT14I CCWWGG 9 cut(s) 1107, 2594, 2980, 3336, 3534, 3756, 7173, 8289, 10789
EcoT22I ATGCAT 6 cut(s) 1855, 2392, 4779, 6399, 7413, 9151
EcoT38I GRGCYC 5 cut(s) 636, 746, 3523, 8514, 10892
EgeI GGCGCC 1 cut(s) 8311
EheI GGCGCC 1 cut(s) 8311
ErhI CCWWGG 9 cut(s) 1107, 2594, 2980, 3336, 3534, 3756, 7173, 8289, 10789
Esp3I CGTCTC 1 cut(s) 1143
FaqI GGGAC 8 cut(s) 1093, 2546, 6235, 7141, 8651, 8992, 9461, 10741
FauI CCCGC 5 cut(s) 1140, 3726, 5039, 6260, 10558
FauNDI CATATG 3 cut(s) 1660, 8411, 10918
FbaI TGATCA 7 cut(s) 3295, 4315, 6181, 6634, 8491, 9949, 10683
FblI GTMKAC 4 cut(s) 3223, 3400, 3855, 6451
FriOI GRGCYC 5 cut(s) 636, 746, 3523, 8514, 10892
GlaI GCGC 6 cut(s) 1666, 2075, 2989, 3722, 6854, 8311
GsaI CCCAGC 4 cut(s) 565, 1188, 1671, 2683
GsuI CTGGAG 8 cut(s) 1663, 2953, 3425, 3734, 5779, 6749, 7917, 9500
HaeII RGCGCY 2 cut(s) 1668, 8313
HapII CCGG 9 cut(s) 168, 871, 4845, 5893, 7325, 7776, 9597, 10513, 10976
HgaI GACGC 8 cut(s) 1125, 3270, 7046, 7781, 8096, 8256, 9404, 10743
HhaI GCGC 6 cut(s) 1667, 2076, 2990, 3723, 6855, 8312
Hin1I GRCGYC 4 cut(s) 6844, 7057, 7773, 8310
Hin6I GCGC 6 cut(s) 1665, 2074, 2988, 3721, 6853, 8310
HinP1I GCGC 6 cut(s) 1665, 2074, 2988, 3721, 6853, 8310
HincII GTYRAC 6 cut(s) 1993, 3224, 6948, 8006, 8323, 10578
HindII GTYRAC 6 cut(s) 1993, 3224, 6948, 8006, 8323, 10578
HindIII AAGCTT 8 cut(s) 1629, 2399, 2547, 4205, 5558, 5916, 5985, 7236
HpaI GTTAAC 1 cut(s) 10578
HpaII CCGG 9 cut(s) 168, 871, 4845, 5893, 7325, 7776, 9597, 10513, 10976
Hpy99I CGWCG 6 cut(s) 31, 59, 503, 3225, 3228, 7018
HpyCH4IV ACGT 8 cut(s) 498, 2743, 4383, 6844, 7013, 8140, 8272, 8698
HpySE526I ACGT 8 cut(s) 498, 2743, 4383, 6844, 7013, 8140, 8272, 8698
Hsp92I GRCGYC 4 cut(s) 6844, 7057, 7773, 8310
HspAI GCGC 6 cut(s) 1665, 2074, 2988, 3721, 6853, 8310
KasI GGCGCC 1 cut(s) 8309
Kpn2I TCCGGA 1 cut(s) 7324
KpnI GGTACC 2 cut(s) 860, 1358
KroI GCCGGC 1 cut(s) 9596
KroNI GCCGGC 1 cut(s) 9598
Ksp22I TGATCA 7 cut(s) 3295, 4315, 6181, 6634, 8491, 9949, 10683
KspAI GTTAAC 1 cut(s) 10578
LguI GCTCTTC 5 cut(s) 2058, 2781, 2862, 3512, 9979
MabI ACCWGGT 2 cut(s) 3962, 8218
MaeII ACGT 8 cut(s) 498, 2743, 4383, 6844, 7013, 8140, 8272, 8698
MbiI CCGCTC 1 cut(s) 1147
MfeI CAATTG 7 cut(s) 4413, 5478, 7160, 7332, 7788, 8280, 9189
MlsI TGGCCA 2 cut(s) 9735, 10278
MluNI TGGCCA 2 cut(s) 9735, 10278
Mly113I GGCGCC 1 cut(s) 8310
MlyI GAGTC 9 cut(s) 80, 1487, 2840, 3781, 6022, 6059, 6131, 6293, 7334
MmeI TCCRAC 9 cut(s) 261, 1280, 2434, 3085, 3976, 4189, 6907, 9304, 10947
Mox20I TGGCCA 2 cut(s) 9735, 10278
Mph1103I ATGCAT 6 cut(s) 1855, 2392, 4779, 6399, 7413, 9151
MroI TCCGGA 1 cut(s) 7324
MroNI GCCGGC 1 cut(s) 9596
MscI TGGCCA 2 cut(s) 9735, 10278
Msp20I TGGCCA 2 cut(s) 9735, 10278
MspCI CTTAAG 2 cut(s) 9337, 9878
MspI CCGG 9 cut(s) 168, 871, 4845, 5893, 7325, 7776, 9597, 10513, 10976
MunI CAATTG 7 cut(s) 4413, 5478, 7160, 7332, 7788, 8280, 9189
Mva1269I GAATGC 6 cut(s) 727, 1878, 5008, 6901, 6976, 7602
MvnI CGCG 5 cut(s) 2976, 2988, 3721, 3723, 6296
NaeI GCCGGC 1 cut(s) 9598
NarI GGCGCC 1 cut(s) 8310
NciI CCSGG 1 cut(s) 4846
NcoI CCATGG 3 cut(s) 3534, 3756, 7173
NdeI CATATG 3 cut(s) 1660, 8411, 10918
NgoMIV GCCGGC 1 cut(s) 9596
NheI GCTAGC 4 cut(s) 3611, 3682, 5783, 9226
NmeAIII GCCGAG 1 cut(s) 8569
NsiI ATGCAT 6 cut(s) 1855, 2392, 4779, 6399, 7413, 9151
NspV TTCGAA 1 cut(s) 3309
OliI CACNNNNGTG 1 cut(s) 501
PaeI GCATGC 5 cut(s) 323, 4781, 7411, 8342, 10027
PaeR7I CTCGAG 2 cut(s) 7623, 11000
PagI TCATGA 5 cut(s) 1141, 5296, 6637, 7558, 10345
PaqCI CACCTGC 2 cut(s) 4552, 10082
PceI AGGCCT 1 cut(s) 5134
PciI ACATGT 7 cut(s) 2354, 4196, 5599, 6121, 7398, 8133, 9778
PciSI GCTCTTC 5 cut(s) 2058, 2781, 2862, 3512, 9979
PcsI WCGNNNNNNNCGW 4 cut(s) 910, 2749, 8164, 11034
PctI GAATGC 6 cut(s) 727, 1878, 5008, 6901, 6976, 7602
PdiI GCCGGC 1 cut(s) 9598
PflFI GACNNNGTC 1 cut(s) 8024
PflMI CCANNNNNTGG 6 cut(s) 2953, 3757, 6046, 6232, 9674, 10285
PleI GAGTC 9 cut(s) 80, 1486, 2839, 3781, 6022, 6059, 6131, 6292, 7334
PluTI GGCGCC 1 cut(s) 8313
PpsI GAGTC 9 cut(s) 80, 1486, 2839, 3781, 6022, 6059, 6131, 6292, 7334
Ppu21I YACGTR 2 cut(s) 8141, 8273
PpuMI RGGWCCY 4 cut(s) 436, 1807, 3745, 5657
PscI ACATGT 7 cut(s) 2354, 4196, 5599, 6121, 7398, 8133, 9778
PshAI GACNNNNGTC 2 cut(s) 2982, 6934
PshBI ATTAAT 2 cut(s) 6750, 10646
PsiI TTATAA 1 cut(s) 782
Psp124BI GAGCTC 1 cut(s) 746
Psp5II RGGWCCY 4 cut(s) 436, 1807, 3745, 5657
PspEI GGTNACC 1 cut(s) 6109
PspFI CCCAGC 4 cut(s) 561, 1184, 1667, 2679
PspPPI RGGWCCY 4 cut(s) 436, 1807, 3745, 5657
PspXI VCTCGAGB 1 cut(s) 7623
PsrI GAACNNNNNNTAC 2 cut(s) 10193, 10225
PstI CTGCAG 7 cut(s) 1777, 2269, 4215, 4791, 8394, 9351, 9700
PsyI GACNNNGTC 1 cut(s) 8024
PvuII CAGCTG 8 cut(s) 1460, 2264, 4997, 6272, 7232, 7454, 8389, 8504
Rsr2I CGGWCCG 1 cut(s) 1059
RsrII CGGWCCG 1 cut(s) 1059
SacI GAGCTC 1 cut(s) 746
SalI GTCGAC 1 cut(s) 3222
SapI GCTCTTC 5 cut(s) 2058, 2781, 2862, 3512, 9979
ScaI AGTACT 3 cut(s) 2191, 2461, 4360
SchI GAGTC 9 cut(s) 80, 1487, 2840, 3781, 6022, 6059, 6131, 6293, 7334
SexAI ACCWGGT 2 cut(s) 3962, 8218
SfoI GGCGCC 1 cut(s) 8311
Sfr274I CTCGAG 2 cut(s) 7623, 11000
SfuI TTCGAA 1 cut(s) 3309
SgrDI CGTCGACG 1 cut(s) 3222
SlaI CTCGAG 2 cut(s) 7623, 11000
SpeI ACTAGT 3 cut(s) 2993, 3824, 10630
SphI GCATGC 5 cut(s) 323, 4781, 7411, 8342, 10027
SseBI AGGCCT 1 cut(s) 5134
SspDI GGCGCC 1 cut(s) 8309
SspI AATATT 5 cut(s) 1336, 4906, 5685, 7033, 10736
SstI GAGCTC 1 cut(s) 746
StuI AGGCCT 1 cut(s) 5134
StyI CCWWGG 9 cut(s) 1107, 2594, 2980, 3336, 3534, 3756, 7173, 8289, 10789
TaiI ACGT 8 cut(s) 501, 2746, 4386, 6847, 7016, 8143, 8275, 8701
TaqII GACCGA 1 cut(s) 7378
TauI GCSGC 3 cut(s) 217, 8374, 9461
Tth111I GACNNNGTC 1 cut(s) 8024
Van91I CCANNNNNTGG 6 cut(s) 2953, 3757, 6046, 6232, 9674, 10285
Vha464I CTTAAG 2 cut(s) 9337, 9878
VneI GTGCAC 1 cut(s) 10869
VspI ATTAAT 2 cut(s) 6750, 10646
XagI CCTNNNNNAGG 2 cut(s) 2527, 10857
XbaI TCTAGA 3 cut(s) 2779, 5365, 6839
XcmI CCANNNNNNNNNTGG 6 cut(s) 2044, 4481, 6308, 6356, 7103, 7487
XhoI CTCGAG 2 cut(s) 7623, 11000
XmaJI CCTAGG 1 cut(s) 2594
XmiI GTMKAC 4 cut(s) 3223, 3400, 3855, 6451
ZraI GACGTC 1 cut(s) 6845
ZrmI AGTACT 3 cut(s) 2191, 2461, 4360
Zsp2I ATGCAT 6 cut(s) 1855, 2392, 4779, 6399, 7413, 9151
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.