E3 ubiquitin-protein ligase
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_5g34290 FvH4_5g34290 |
| malus_domestica | MD08G1203000.v1.1 MD08G1203200.v1.1 MD15G1388600.v1.1 |
| prunus_persica | Prupe.1G535000_v2.0.a1 |
| pyrus_communis | pycom08g17530 pycom15g34850 |
| rosa_chinensis | RchiOBHm_Chr7g0234861 |
| rosa_laevigata | RLG00000001209 |
| rosa_multiflora | Rmu_sc0000039.1_g000001 |
| rosa_roxburghii | Rroxscaffold_3G00226700 |
| rosa_rugosa | Rorug07G0285700 Rorug07G0285800 |
| rosa_samantha | Rh7AG440400 Rh7BG413200 Rh7CG462100 Rh7DG430100 |
| rosa_wichuraiana | Rw7G036610 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 782 |
| AarI | CACCTGC | 1 cut(s) | 4552 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 253 |
| Acc36I | ACCTGC | 3 cut(s) | 1720, 4257, 4552 |
| Acc65I | GGTACC | 2 cut(s) | 856, 3211 |
| AccB1I | GGYRCC | 2 cut(s) | 856, 3211 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 2953, 3757 |
| AccBSI | CCGCTC | 1 cut(s) | 1147 |
| AccI | GTMKAC | 4 cut(s) | 3223, 3272, 3400, 3855 |
| AccII | CGCG | 2 cut(s) | 3721, 3723 |
| AcuI | CTGAAG | 7 cut(s) | 1271, 2232, 2417, 2886, 3060, 4074, 4956 |
| AcyI | GRCGYC | 1 cut(s) | 3269 |
| AdeI | CACNNNGTG | 1 cut(s) | 3640 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 167, 550, 774, 2529, 2953, 3757, 3969 |
| AflIII | ACRYGT | 2 cut(s) | 2354, 4196 |
| AhlI | ACTAGT | 1 cut(s) | 2993 |
| AjiI | CACGTC | 2 cut(s) | 499, 2800 |
| AjnI | CCWGG | 4 cut(s) | 2762, 3693, 3962, 4891 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1804, 1836 |
| AleI | CACNNNNGTG | 1 cut(s) | 501 |
| Alw21I | GWGCWC | 3 cut(s) | 64, 746, 1117 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 1781, 2953, 3083 |
| Ama87I | CYCGRG | 3 cut(s) | 65, 431, 4074 |
| AoxI | GGCC | 6 cut(s) | 68, 212, 2165, 3314, 3910, 4289 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 11, 43, 4264, 4296 |
| AseI | ATTAAT | 1 cut(s) | 1043 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 691, 1007, 1281, 2620 |
| Asp718I | GGTACC | 2 cut(s) | 856, 3211 |
| AspA2I | CCTAGG | 1 cut(s) | 2594 |
| AspLEI | GCGC | 3 cut(s) | 1667, 1928, 3723 |
| AsuC2I | CCSGG | 1 cut(s) | 4846 |
| AsuHPI | GGTGA | 3 cut(s) | 194, 1586, 3163 |
| AsuII | TTCGAA | 1 cut(s) | 3309 |
| AsuNHI | GCTAGC | 2 cut(s) | 3611, 3682 |
| AvaI | CYCGRG | 3 cut(s) | 65, 431, 4074 |
| AvrII | CCTAGG | 1 cut(s) | 2594 |
| AxyI | CCTNAGG | 1 cut(s) | 2528 |
| BaeGI | GKGCMC | 2 cut(s) | 1153, 4081 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 1893, 1926, 3355, 3388 |
| BamHI | GGATCC | 3 cut(s) | 2576, 3044, 3332 |
| BanI | GGYRCC | 2 cut(s) | 856, 3211 |
| BanII | GRGCYC | 3 cut(s) | 636, 746, 3523 |
| BauI | CACGAG | 3 cut(s) | 903, 2002, 4419 |
| BbsI | GAAGAC | 4 cut(s) | 3066, 3485, 4065, 4413 |
| Bbv12I | GWGCWC | 3 cut(s) | 64, 746, 1117 |
| BceAI | ACGGC | 4 cut(s) | 10, 2037, 4548, 4966 |
| BcgI | CGANNNNNNTGC | 6 cut(s) | 1348, 1382, 2086, 2120, 3299, 3333 |
| BciT130I | CCWGG | 4 cut(s) | 2764, 3695, 3964, 4893 |
| BclI | TGATCA | 2 cut(s) | 3295, 4315 |
| BcnI | CCSGG | 1 cut(s) | 4846 |
| BcuI | ACTAGT | 1 cut(s) | 2993 |
| BfmI | CTRYAG | 7 cut(s) | 1217, 1323, 1511, 2253, 2265, 4211, 4787 |
| BfoI | RGCGCY | 2 cut(s) | 1668, 1929 |
| BfuAI | ACCTGC | 3 cut(s) | 1720, 4257, 4552 |
| BlnI | CCTAGG | 1 cut(s) | 2594 |
| BlpI | GCTNAGC | 1 cut(s) | 4140 |
| BmcAI | AGTACT | 3 cut(s) | 2191, 2461, 4360 |
| Bme1390I | CCNGG | 5 cut(s) | 2764, 3695, 3964, 4846, 4893 |
| BmeT110I | CYCGRG | 3 cut(s) | 65, 431, 4074 |
| BmgBI | CACGTC | 2 cut(s) | 499, 2800 |
| BmrFI | CCNGG | 5 cut(s) | 2764, 3695, 3964, 4846, 4893 |
| BmrI | ACTGGG | 1 cut(s) | 2941 |
| BmtI | GCTAGC | 2 cut(s) | 3615, 3686 |
| BmuI | ACTGGG | 1 cut(s) | 2941 |
| BoxI | GACNNNNGTC | 2 cut(s) | 890, 2982 |
| BpiI | GAAGAC | 4 cut(s) | 3066, 3485, 4065, 4413 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 728, 760 |
| BpmI | CTGGAG | 4 cut(s) | 1663, 2953, 3425, 3734 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 4140 |
| Bpu14I | TTCGAA | 1 cut(s) | 3309 |
| BpuEI | CTTGAG | 3 cut(s) | 1180, 1567, 2138 |
| BpuMI | CCSGG | 1 cut(s) | 4846 |
| Bsa29I | ATCGAT | 1 cut(s) | 4943 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1386 |
| BsaHI | GRCGYC | 1 cut(s) | 3269 |
| BsaI | GGTCTC | 3 cut(s) | 1847, 3725, 4239 |
| BsaJI | CCNNGG | 9 cut(s) | 432, 2594, 2980, 3336, 3534, 3693, 3756, 4845, 4892 |
| BsaWI | WCCGGW | 3 cut(s) | 167, 870, 4956 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 4016, 4046 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 167, 550, 774, 2529, 2953, 3757, 3969 |
| Bse21I | CCTNAGG | 1 cut(s) | 2528 |
| Bse3DI | GCAATG | 7 cut(s) | 1104, 2031, 2233, 2690, 3285, 4026, 4987 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1386 |
| BseBI | CCWGG | 4 cut(s) | 2764, 3695, 3964, 4893 |
| BseCI | ATCGAT | 1 cut(s) | 4943 |
| BseDI | CCNNGG | 9 cut(s) | 432, 2594, 2980, 3336, 3534, 3693, 3756, 4845, 4892 |
| BseJI | GATNNNNATC | 1 cut(s) | 1386 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 167, 550, 774, 2529, 2953, 3757, 3969 |
| BseMI | GCAATG | 7 cut(s) | 1104, 2031, 2233, 2690, 3285, 4026, 4987 |
| BseMII | CTCAG | 8 cut(s) | 1130, 1146, 1517, 2820, 3720, 3809, 3977, 4154 |
| BseRI | GAGGAG | 4 cut(s) | 752, 860, 2512, 4196 |
| BseSI | GKGCMC | 2 cut(s) | 1153, 4081 |
| BseYI | CCCAGC | 3 cut(s) | 561, 1667, 2679 |
| Bsh1236I | CGCG | 2 cut(s) | 3721, 3723 |
| Bsh1285I | CGRYCG | 3 cut(s) | 4943, 4947, 4957 |
| BshFI | GGCC | 6 cut(s) | 70, 214, 2167, 3316, 3912, 4291 |
| BshNI | GGYRCC | 2 cut(s) | 856, 3211 |
| BshVI | ATCGAT | 1 cut(s) | 4943 |
| BsiEI | CGRYCG | 3 cut(s) | 4943, 4947, 4957 |
| BsiHKAI | GWGCWC | 3 cut(s) | 64, 746, 1117 |
| BsiHKCI | CYCGRG | 3 cut(s) | 65, 431, 4074 |
| BsiSI | CCGG | 4 cut(s) | 168, 871, 4845, 4957 |
| BslFI | GGGAC | 3 cut(s) | 1093, 1772, 2546 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 167, 550, 774, 2529, 2953, 3757, 3969 |
| BsmBI | CGTCTC | 1 cut(s) | 1143 |
| BsmFI | GGGAC | 3 cut(s) | 1093, 1772, 2546 |
| BsmI | GAATGC | 2 cut(s) | 1878, 4141 |
| BsnI | GGCC | 6 cut(s) | 70, 214, 2167, 3316, 3912, 4291 |
| Bso31I | GGTCTC | 3 cut(s) | 1847, 3725, 4239 |
| BsoBI | CYCGRG | 3 cut(s) | 65, 431, 4074 |
| Bsp119I | TTCGAA | 1 cut(s) | 3309 |
| Bsp1286I | GDGCHC | 7 cut(s) | 64, 636, 746, 1117, 1153, 3523, 4081 |
| Bsp1407I | TGTACA | 2 cut(s) | 936, 2422 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 4140 |
| Bsp19I | CCATGG | 2 cut(s) | 3534, 3756 |
| BspANI | GGCC | 6 cut(s) | 70, 214, 2167, 3316, 3912, 4291 |
| BspCNI | CTCAG | 8 cut(s) | 1129, 1145, 1516, 2821, 3721, 3808, 3978, 4153 |
| BspDI | ATCGAT | 1 cut(s) | 4943 |
| BspFNI | CGCG | 2 cut(s) | 3721, 3723 |
| BspHI | TCATGA | 1 cut(s) | 1141 |
| BspMAI | CTGCAG | 3 cut(s) | 2269, 4215, 4791 |
| BspMI | ACCTGC | 3 cut(s) | 1720, 4257, 4552 |
| BspOI | GCTAGC | 2 cut(s) | 3615, 3686 |
| BspQI | GCTCTTC | 4 cut(s) | 2058, 2781, 2862, 3512 |
| BspT104I | TTCGAA | 1 cut(s) | 3309 |
| BspT107I | GGYRCC | 2 cut(s) | 856, 3211 |
| BspTNI | GGTCTC | 3 cut(s) | 1847, 3725, 4239 |
| BsrBI | CCGCTC | 1 cut(s) | 1147 |
| BsrDI | GCAATG | 7 cut(s) | 1104, 2031, 2233, 2690, 3285, 4026, 4987 |
| BsrGI | TGTACA | 2 cut(s) | 936, 2422 |
| BssECI | CCNNGG | 9 cut(s) | 432, 2594, 2980, 3336, 3534, 3693, 3756, 4845, 4892 |
| BssNAI | GTATAC | 1 cut(s) | 3856 |
| BssNI | GRCGYC | 1 cut(s) | 3269 |
| BssSI | CACGAG | 3 cut(s) | 903, 2002, 4419 |
| BssT1I | CCWWGG | 5 cut(s) | 2594, 2980, 3336, 3534, 3756 |
| Bst1107I | GTATAC | 1 cut(s) | 3856 |
| Bst2BI | CACGAG | 3 cut(s) | 903, 2002, 4419 |
| Bst2UI | CCWGG | 4 cut(s) | 2764, 3695, 3964, 4893 |
| BstACI | GRCGYC | 1 cut(s) | 3269 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 325, 948, 1103 |
| BstAUI | TGTACA | 2 cut(s) | 936, 2422 |
| BstBI | TTCGAA | 1 cut(s) | 3309 |
| BstDSI | CCRYGG | 2 cut(s) | 3534, 3756 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2527 |
| BstFNI | CGCG | 2 cut(s) | 3721, 3723 |
| BstH2I | RGCGCY | 2 cut(s) | 1668, 1929 |
| BstHHI | GCGC | 3 cut(s) | 1667, 1928, 3723 |
| BstMCI | CGRYCG | 3 cut(s) | 4943, 4947, 4957 |
| BstNI | CCWGG | 4 cut(s) | 2764, 3695, 3964, 4893 |
| BstNSI | RCATGY | 5 cut(s) | 323, 2358, 3854, 4200, 4781 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 890, 2982 |
| BstSCI | CCNGG | 5 cut(s) | 2762, 3693, 3962, 4844, 4891 |
| BstSFI | CTRYAG | 7 cut(s) | 1217, 1323, 1511, 2253, 2265, 4211, 4787 |
| BstSLI | GKGCMC | 2 cut(s) | 1153, 4081 |
| BstUI | CGCG | 2 cut(s) | 3721, 3723 |
| BstV2I | GAAGAC | 4 cut(s) | 3066, 3485, 4065, 4413 |
| BstX2I | RGATCY | 4 cut(s) | 427, 2576, 3044, 3332 |
| BstXI | CCANNNNNNTGG | 4 cut(s) | 1951, 3068, 4093, 4277 |
| BstYI | RGATCY | 4 cut(s) | 427, 2576, 3044, 3332 |
| BstZ17I | GTATAC | 1 cut(s) | 3856 |
| Bsu15I | ATCGAT | 1 cut(s) | 4943 |
| Bsu36I | CCTNAGG | 1 cut(s) | 2528 |
| BsuRI | GGCC | 6 cut(s) | 70, 214, 2167, 3316, 3912, 4291 |
| BsuTUI | ATCGAT | 1 cut(s) | 4943 |
| BtgI | CCRYGG | 2 cut(s) | 3534, 3756 |
| BtgZI | GCGATG | 1 cut(s) | 3738 |
| BtrI | CACGTC | 2 cut(s) | 499, 2800 |
| BtsI | GCAGTG | 4 cut(s) | 686, 1782, 2064, 3894 |
| BveI | ACCTGC | 3 cut(s) | 1720, 4257, 4552 |
| CaiI | CAGNNNCTG | 3 cut(s) | 1781, 2953, 3083 |
| CciI | TCATGA | 1 cut(s) | 1141 |
| CfoI | GCGC | 3 cut(s) | 1667, 1928, 3723 |
| ClaI | ATCGAT | 1 cut(s) | 4943 |
| CpoI | CGGWCCG | 1 cut(s) | 1059 |
| CseI | GACGC | 4 cut(s) | 1125, 3258, 3270, 4418 |
| CsiI | ACCWGGT | 1 cut(s) | 3962 |
| CspCI | CAANNNNNGTGG | 8 cut(s) | 2040, 2075, 3246, 3281, 3927, 3962, 3990, 4025 |
| CspI | CGGWCCG | 1 cut(s) | 1059 |
| DraI | TTTAAA | 2 cut(s) | 822, 1474 |
| DraIII | CACNNNGTG | 1 cut(s) | 3640 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 253 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 253 |
| EciI | GGCGGA | 1 cut(s) | 2063 |
| Ecl136II | GAGCTC | 1 cut(s) | 744 |
| Eco130I | CCWWGG | 5 cut(s) | 2594, 2980, 3336, 3534, 3756 |
| Eco24I | GRGCYC | 3 cut(s) | 636, 746, 3523 |
| Eco31I | GGTCTC | 3 cut(s) | 1847, 3725, 4239 |
| Eco32I | GATATC | 2 cut(s) | 2110, 4191 |
| Eco53kI | GAGCTC | 1 cut(s) | 744 |
| Eco57I | CTGAAG | 7 cut(s) | 1271, 2232, 2417, 2886, 3060, 4074, 4956 |
| Eco81I | CCTNAGG | 1 cut(s) | 2528 |
| Eco88I | CYCGRG | 3 cut(s) | 65, 431, 4074 |
| EcoICRI | GAGCTC | 1 cut(s) | 744 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2527 |
| EcoO109I | RGGNCCY | 3 cut(s) | 436, 3314, 3745 |
| EcoRI | GAATTC | 4 cut(s) | 1003, 1672, 2344, 3553 |
| EcoRII | CCWGG | 4 cut(s) | 2762, 3693, 3962, 4891 |
| EcoRV | GATATC | 2 cut(s) | 2110, 4191 |
| EcoT14I | CCWWGG | 5 cut(s) | 2594, 2980, 3336, 3534, 3756 |
| EcoT22I | ATGCAT | 3 cut(s) | 1855, 2392, 4779 |
| EcoT38I | GRGCYC | 3 cut(s) | 636, 746, 3523 |
| ErhI | CCWWGG | 5 cut(s) | 2594, 2980, 3336, 3534, 3756 |
| Esp3I | CGTCTC | 1 cut(s) | 1143 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 236, 268, 1269, 1301, 2908, 2940, 3759, 3791 |
| FaqI | GGGAC | 3 cut(s) | 1093, 1772, 2546 |
| FauI | CCCGC | 3 cut(s) | 1140, 1748, 3726 |
| FauNDI | CATATG | 1 cut(s) | 1660 |
| FbaI | TGATCA | 2 cut(s) | 3295, 4315 |
| FblI | GTMKAC | 4 cut(s) | 3223, 3272, 3400, 3855 |
| FriOI | GRGCYC | 3 cut(s) | 636, 746, 3523 |
| GlaI | GCGC | 3 cut(s) | 1666, 1927, 3722 |
| GsaI | CCCAGC | 3 cut(s) | 565, 1671, 2683 |
| GsuI | CTGGAG | 4 cut(s) | 1663, 2953, 3425, 3734 |
| HaeII | RGCGCY | 2 cut(s) | 1668, 1929 |
| HaeIII | GGCC | 6 cut(s) | 70, 214, 2167, 3316, 3912, 4291 |
| HapII | CCGG | 4 cut(s) | 168, 871, 4845, 4957 |
| HgaI | GACGC | 4 cut(s) | 1125, 3258, 3270, 4418 |
| HhaI | GCGC | 3 cut(s) | 1667, 1928, 3723 |
| Hin1I | GRCGYC | 1 cut(s) | 3269 |
| Hin6I | GCGC | 3 cut(s) | 1665, 1926, 3721 |
| HinP1I | GCGC | 3 cut(s) | 1665, 1926, 3721 |
| HincII | GTYRAC | 2 cut(s) | 1993, 3224 |
| HindII | GTYRAC | 2 cut(s) | 1993, 3224 |
| HindIII | AAGCTT | 4 cut(s) | 1629, 2399, 2547, 4205 |
| HpaII | CCGG | 4 cut(s) | 168, 871, 4845, 4957 |
| HphI | GGTGA | 3 cut(s) | 194, 1586, 3163 |
| Hpy99I | CGWCG | 5 cut(s) | 31, 59, 3225, 3228, 4952 |
| HpyCH4IV | ACGT | 4 cut(s) | 498, 753, 2799, 4383 |
| HpySE526I | ACGT | 4 cut(s) | 498, 753, 2799, 4383 |
| Hsp92I | GRCGYC | 1 cut(s) | 3269 |
| HspAI | GCGC | 3 cut(s) | 1665, 1926, 3721 |
| KpnI | GGTACC | 2 cut(s) | 860, 3215 |
| Ksp22I | TGATCA | 2 cut(s) | 3295, 4315 |
| LguI | GCTCTTC | 4 cut(s) | 2058, 2781, 2862, 3512 |
| LmnI | GCTCC | 9 cut(s) | 414, 1305, 1329, 2525, 2934, 2993, 3526, 4222, 4271 |
| MabI | ACCWGGT | 1 cut(s) | 3962 |
| MaeII | ACGT | 4 cut(s) | 498, 753, 2799, 4383 |
| MaeIII | GTNAC | 9 cut(s) | 1592, 1777, 1977, 2017, 2683, 2832, 2975, 3143, 3640 |
| MbiI | CCGCTC | 1 cut(s) | 1147 |
| MfeI | CAATTG | 1 cut(s) | 4413 |
| MflI | RGATCY | 4 cut(s) | 427, 2576, 3044, 3332 |
| MhlI | GDGCHC | 7 cut(s) | 64, 636, 746, 1117, 1153, 3523, 4081 |
| MlyI | GAGTC | 4 cut(s) | 900, 1487, 2840, 3781 |
| MmeI | TCCRAC | 8 cut(s) | 261, 1280, 1382, 2434, 2823, 3085, 3976, 4189 |
| Mph1103I | ATGCAT | 3 cut(s) | 1855, 2392, 4779 |
| MroXI | GAANNNNTTC | 4 cut(s) | 691, 1007, 1281, 2620 |
| MslI | CAYNNNNRTG | 3 cut(s) | 501, 720, 1695 |
| MspA1I | CMGCKG | 3 cut(s) | 1460, 1603, 2679 |
| MspI | CCGG | 4 cut(s) | 168, 871, 4845, 4957 |
| MspR9I | CCNGG | 5 cut(s) | 2764, 3695, 3964, 4846, 4893 |
| MunI | CAATTG | 1 cut(s) | 4413 |
| Mva1269I | GAATGC | 2 cut(s) | 1878, 4141 |
| MvaI | CCWGG | 4 cut(s) | 2764, 3695, 3964, 4893 |
| MvnI | CGCG | 2 cut(s) | 3721, 3723 |
| NciI | CCSGG | 1 cut(s) | 4846 |
| NcoI | CCATGG | 2 cut(s) | 3534, 3756 |
| NdeI | CATATG | 1 cut(s) | 1660 |
| NheI | GCTAGC | 2 cut(s) | 3611, 3682 |
| NmuCI | GTSAC | 6 cut(s) | 1592, 1777, 2832, 2975, 3143, 3640 |
| NsiI | ATGCAT | 3 cut(s) | 1855, 2392, 4779 |
| NspI | RCATGY | 5 cut(s) | 323, 2358, 3854, 4200, 4781 |
| NspV | TTCGAA | 1 cut(s) | 3309 |
| OliI | CACNNNNGTG | 1 cut(s) | 501 |
| PaeI | GCATGC | 2 cut(s) | 323, 4781 |
| PagI | TCATGA | 1 cut(s) | 1141 |
| PaqCI | CACCTGC | 1 cut(s) | 4552 |
| PciI | ACATGT | 2 cut(s) | 2354, 4196 |
| PciSI | GCTCTTC | 4 cut(s) | 2058, 2781, 2862, 3512 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 910 |
| PctI | GAATGC | 2 cut(s) | 1878, 4141 |
| PdmI | GAANNNNTTC | 4 cut(s) | 691, 1007, 1281, 2620 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 2953, 3757 |
| Ple19I | CGATCG | 2 cut(s) | 4943, 4947 |
| PleI | GAGTC | 4 cut(s) | 899, 1486, 2839, 3781 |
| PpsI | GAGTC | 4 cut(s) | 899, 1486, 2839, 3781 |
| PpuMI | RGGWCCY | 2 cut(s) | 436, 3745 |
| PscI | ACATGT | 2 cut(s) | 2354, 4196 |
| PshAI | GACNNNNGTC | 2 cut(s) | 890, 2982 |
| PshBI | ATTAAT | 1 cut(s) | 1043 |
| PsiI | TTATAA | 1 cut(s) | 782 |
| Psp124BI | GAGCTC | 1 cut(s) | 746 |
| Psp5II | RGGWCCY | 2 cut(s) | 436, 3745 |
| Psp6I | CCWGG | 4 cut(s) | 2762, 3693, 3962, 4891 |
| PspFI | CCCAGC | 3 cut(s) | 561, 1667, 2679 |
| PspGI | CCWGG | 4 cut(s) | 2762, 3693, 3962, 4891 |
| PspPPI | RGGWCCY | 2 cut(s) | 436, 3745 |
| PstI | CTGCAG | 3 cut(s) | 2269, 4215, 4791 |
| PstNI | CAGNNNCTG | 3 cut(s) | 1781, 2953, 3083 |
| PsuI | RGATCY | 4 cut(s) | 427, 2576, 3044, 3332 |
| PvuI | CGATCG | 2 cut(s) | 4943, 4947 |
| PvuII | CAGCTG | 2 cut(s) | 1460, 1603 |
| RseI | CAYNNNNRTG | 3 cut(s) | 501, 720, 1695 |
| Rsr2I | CGGWCCG | 1 cut(s) | 1059 |
| RsrII | CGGWCCG | 1 cut(s) | 1059 |
| SacI | GAGCTC | 1 cut(s) | 746 |
| SalI | GTCGAC | 1 cut(s) | 3222 |
| SapI | GCTCTTC | 4 cut(s) | 2058, 2781, 2862, 3512 |
| ScaI | AGTACT | 3 cut(s) | 2191, 2461, 4360 |
| SchI | GAGTC | 4 cut(s) | 900, 1487, 2840, 3781 |
| ScrFI | CCNGG | 5 cut(s) | 2764, 3695, 3964, 4846, 4893 |
| SduI | GDGCHC | 7 cut(s) | 64, 636, 746, 1117, 1153, 3523, 4081 |
| SexAI | ACCWGGT | 1 cut(s) | 3962 |
| SfcI | CTRYAG | 7 cut(s) | 1217, 1323, 1511, 2253, 2265, 4211, 4787 |
| SfuI | TTCGAA | 1 cut(s) | 3309 |
| SgrDI | CGTCGACG | 1 cut(s) | 3222 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 501, 720, 1695 |
| SmlI | CTYRAG | 3 cut(s) | 1159, 1582, 2117 |
| SmoI | CTYRAG | 3 cut(s) | 1159, 1582, 2117 |
| SpeI | ACTAGT | 1 cut(s) | 2993 |
| SphI | GCATGC | 2 cut(s) | 323, 4781 |
| SspI | AATATT | 3 cut(s) | 1336, 3709, 4906 |
| SstI | GAGCTC | 1 cut(s) | 746 |
| StyD4I | CCNGG | 5 cut(s) | 2762, 3693, 3962, 4844, 4891 |
| StyI | CCWWGG | 5 cut(s) | 2594, 2980, 3336, 3534, 3756 |
| TaiI | ACGT | 4 cut(s) | 501, 756, 2802, 4386 |
| TauI | GCSGC | 1 cut(s) | 217 |
| TseFI | GTSAC | 6 cut(s) | 1592, 1777, 2832, 2975, 3143, 3640 |
| Tsp45I | GTSAC | 6 cut(s) | 1592, 1777, 2832, 2975, 3143, 3640 |
| TspGWI | ACGGA | 5 cut(s) | 164, 297, 902, 2714, 4913 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 2953, 3757 |
| VspI | ATTAAT | 1 cut(s) | 1043 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2527 |
| XbaI | TCTAGA | 1 cut(s) | 2779 |
| XceI | RCATGY | 5 cut(s) | 323, 2358, 3854, 4200, 4781 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 2044, 4481 |
| XmaJI | CCTAGG | 1 cut(s) | 2594 |
| XmiI | GTMKAC | 4 cut(s) | 3223, 3272, 3400, 3855 |
| XmnI | GAANNNNTTC | 4 cut(s) | 691, 1007, 1281, 2620 |
| ZrmI | AGTACT | 3 cut(s) | 2191, 2461, 4360 |
| Zsp2I | ATGCAT | 3 cut(s) | 1855, 2392, 4779 |